View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2901_low_5 (Length: 303)
Name: NF2901_low_5
Description: NF2901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2901_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 37333750 - 37334018
Alignment:
| Q |
1 |
ttacgtgttttcagcgatttgtcatccacaatacaatgtcaaaatcaattgaaagctattatcaagaatcaggaagggctggcagagacaatcttcctgc |
100 |
Q |
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| T |
37333750 |
ttacgtgttttcagcgatttgtcatccacaatacaatgtcaaaatcaattgaaagctattatcaagaatcaggaagggctggaagagacaatcttcctgc |
37333849 |
T |
|
| Q |
101 |
agtttgcattgccctataccagaagaaggattttagtagagttgtatgcatgataagaaacggccaaggatataaaaaggagagttttaagacagcaatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37333850 |
agtttgcattgccctataccagaagaaggattttagtagagttgtatgcatgataagaaacggccaaggatataaaaaggagagttttaagacagcaatg |
37333949 |
T |
|
| Q |
201 |
gctcaagccaaaaagatgcaacagtactgtgaattaaaggtaagcaaggtcccttacatttcagcaagg |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37333950 |
gctcaagccaaaaagatgcaacagtactgtgaattaaaggtaagcaaggtcccttacatttcagcaagg |
37334018 |
T |
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