View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2902_low_9 (Length: 394)

Name: NF2902_low_9
Description: NF2902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2902_low_9
NF2902_low_9
[»] chr2 (22 HSPs)
chr2 (65-387)||(7895140-7895448)
chr2 (248-320)||(7693579-7693651)
chr2 (248-320)||(35665339-35665411)
chr2 (197-311)||(28191686-28191800)
chr2 (200-306)||(578237-578343)
chr2 (77-162)||(24895617-24895702)
chr2 (66-240)||(43281671-43281849)
chr2 (248-320)||(578465-578537)
chr2 (65-141)||(1944076-1944152)
chr2 (248-312)||(28191460-28191524)
chr2 (272-320)||(17642627-17642675)
chr2 (197-296)||(25954700-25954800)
chr2 (272-302)||(1944198-1944228)
chr2 (78-124)||(4300613-4300659)
chr2 (254-320)||(24895742-24895808)
chr2 (82-144)||(27002774-27002836)
chr2 (200-294)||(35665541-35665635)
chr2 (248-320)||(654241-654313)
chr2 (248-312)||(7876180-7876244)
chr2 (272-312)||(12496881-12496921)
chr2 (77-141)||(30956153-30956217)
chr2 (248-312)||(34196828-34196892)
[»] chr8 (6 HSPs)
chr8 (90-310)||(23757309-23757531)
chr8 (252-312)||(158972-159032)
chr8 (216-312)||(15249554-15249650)
chr8 (248-311)||(33758120-33758183)
chr8 (71-129)||(5986599-5986657)
chr8 (249-310)||(22210238-22210299)
[»] chr1 (10 HSPs)
chr1 (251-320)||(1691546-1691615)
chr1 (251-320)||(33261979-33262048)
chr1 (251-320)||(33282138-33282207)
chr1 (65-141)||(10840332-10840408)
chr1 (66-230)||(33261791-33261956)
chr1 (66-230)||(33281950-33282115)
chr1 (147-290)||(27085997-27086141)
chr1 (248-310)||(14398012-14398074)
chr1 (272-310)||(49457999-49458037)
chr1 (200-240)||(49457786-49457826)
[»] chr5 (11 HSPs)
chr5 (248-320)||(26032260-26032332)
chr5 (215-312)||(38445937-38446034)
chr5 (188-298)||(17436473-17436583)
chr5 (253-310)||(32892431-32892488)
chr5 (248-312)||(40972123-40972187)
chr5 (78-132)||(30641729-30641783)
chr5 (272-320)||(36060764-36060812)
chr5 (249-307)||(756924-756982)
chr5 (270-320)||(7630643-7630693)
chr5 (270-320)||(38445680-38445730)
chr5 (250-310)||(40971862-40971922)
[»] chr4 (14 HSPs)
chr4 (248-312)||(11692171-11692235)
chr4 (199-312)||(17947241-17947354)
chr4 (248-320)||(51203233-51203305)
chr4 (248-320)||(31792636-31792708)
chr4 (270-320)||(5521529-5521579)
chr4 (78-132)||(48798541-48798595)
chr4 (249-310)||(5521232-5521293)
chr4 (250-307)||(33414298-33414355)
chr4 (251-320)||(41609326-41609394)
chr4 (248-312)||(52131928-52131992)
chr4 (79-161)||(5521384-5521466)
chr4 (274-320)||(40154667-40154713)
chr4 (257-306)||(41823851-41823900)
chr4 (212-320)||(41609039-41609148)
[»] chr3 (19 HSPs)
chr3 (66-161)||(51107785-51107880)
chr3 (248-318)||(16024808-16024878)
chr3 (323-387)||(38683939-38684006)
chr3 (248-307)||(54141402-54141461)
chr3 (78-132)||(39300641-39300695)
chr3 (254-320)||(54394320-54394386)
chr3 (248-321)||(1741980-1742053)
chr3 (248-309)||(16024545-16024606)
chr3 (274-307)||(18360930-18360963)
chr3 (248-320)||(33309662-33309735)
chr3 (248-320)||(31989816-31989888)
chr3 (66-240)||(28259799-28259974)
chr3 (192-319)||(31990093-31990220)
chr3 (86-132)||(33309786-33309832)
chr3 (90-132)||(46795686-46795728)
chr3 (270-307)||(31993633-31993670)
chr3 (248-305)||(33309949-33310006)
chr3 (270-307)||(49548487-49548524)
chr3 (272-320)||(28260019-28260066)
[»] chr6 (6 HSPs)
chr6 (66-126)||(353464-353524)
chr6 (200-320)||(4096723-4096843)
chr6 (77-161)||(3014393-3014477)
chr6 (255-316)||(31836882-31836942)
chr6 (188-240)||(1111963-1112015)
chr6 (70-130)||(1428879-1428939)
[»] chr7 (9 HSPs)
chr7 (249-320)||(30219031-30219102)
chr7 (253-320)||(39187701-39187768)
chr7 (80-152)||(14585116-14585187)
chr7 (212-320)||(30218761-30218869)
chr7 (248-310)||(2145947-2146009)
chr7 (248-310)||(33004875-33004937)
chr7 (80-141)||(25245351-25245412)
chr7 (80-152)||(15998986-15999057)
chr7 (248-320)||(18503579-18503651)
[»] scaffold0275 (1 HSPs)
scaffold0275 (78-132)||(9087-9141)


Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 65 - 387
Target Start/End: Complemental strand, 7895448 - 7895140
Alignment:
Q  65 agtccctaataaccaatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattatatcgatttattgtcttcaaccct 164  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7895448 agtccctaataaccaatttatgtttatattaatgtcaaaattttgactcttttatgttcaagatgtgttcatattatatcgatttattgtcttcaaccct 7895349  T
Q  165 aataggtccatcttatgctcaacaatgtcaataacatgtcaaaattgtatccattaaggaccaaaagcaaaacaaannnnnnngtgaggatgaaaacata 264  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||        |||||||||||||||||    
T  7895348 aataggtccatcttatgctcaacaatgtcaagaacatgtcaaaattgtatccattagggaccaaaagcaaaacaattttttttgtgaggatgaaaacata 7895249  T
Q  265 caatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaatattttggtgcttcatctacacccactttcagtggttcttccct 364  Q
    ||||||              ||||||||||||||||||||  || ||| ||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  7895248 caatgt--------------taaaatcaaaattcgctataaatacagggacgaaaatattttggtgcttcatctacacccactgaaagtggttcttccct 7895163  T
Q  365 cttctcagcaccgttctctgctc 387  Q
    |||||||||||||||||||||||    
T  7895162 cttctcagcaccgttctctgctc 7895140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 7693651 - 7693579
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    |||||||||||||||| || | | ||||||| | ||||||||||||||||| |||||||||||||||||||||    
T  7693651 gtgaggatgaaaacattcagtttaatttttttgggactaaaatcaaaattctctatatttataggaacgaaaa 7693579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 35665411 - 35665339
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    |||||||||||||||| || | | ||||||||| ||||||||||||||||||||||||||||| | |||||||    
T  35665411 gtgaggatgaaaacattcactttaattttttagggactaaaatcaaaattcgctatatttataaggacgaaaa 35665339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 197 - 311
Target Start/End: Original strand, 28191686 - 28191800
Alignment:
Q  197 aacatgtcaaaattgtatccattaaggaccaaaagcaaaacaaannnnnnngtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaat 296  Q
    |||||||||||||| |||||||||  |||||||| |||||||||       ||||||||||||||||   || ||||||| || ||| ||||||||||||    
T  28191686 aacatgtcaaaattatatccattagagaccaaaaacaaaacaaaaaattttgtgaggatgaaaacatctcattttattttgtaaagattaaaatcaaaat 28191785  T
Q  297 tcgctatatttatag 311  Q
    | | |||||||||||    
T  28191786 ttgatatatttatag 28191800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 306
Target Start/End: Complemental strand, 578343 - 578237
Alignment:
Q  200 atgtcaaaattgtatccattaaggaccaaaagcaaaacaaannnnnnngtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcg 299  Q
    ||||||||||| ||||||||| |||||||||  ||||||||       ||  ||||||||||||   || ||||||||||| |||||||||||||||| |    
T  578343 atgtcaaaattatatccattagggaccaaaactaaaacaaaaaaatttgtcgggatgaaaacatctcattttattttttagggactaaaatcaaaatttg 578244  T
Q  300 ctatatt 306  Q
    |||||||    
T  578243 ctatatt 578237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 24895702 - 24895617
Alignment:
Q  77 ccaatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattatatcgatttattgtcttcaacc 162  Q
    |||||||||||| |||| |||||||| ||| | ||||||||||| ||||||||||| |||||||| ||  |||||| | |||||||    
T  24895702 ccaatttatattcatataaatgtcaagattataactcttttatgatcaagatgtatccatattatgtctttttattatgttcaacc 24895617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 240
Target Start/End: Original strand, 43281671 - 43281849
Alignment:
Q  66 gtccctaataaccaatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattatatcgatttattgtcttcaacccta 165  Q
    ||||||||| |||||||||| |||| | ||||||||| ||| ||||| ||||||||||||||| |  |||  |||| ||  |||||| | ||||||| |     
T  43281671 gtccctaatgaccaatttatgtttaaaataatgtcaagattgtgactattttatgttcaagatatgctcacgttatgtccctttattatgttcaaccttt 43281770  T
Q  166 ataggtccatcttatgct----caacaatgtcaataacatgtcaaaattgtatccattaaggaccaaaagcaaaacaaa 240  Q
     || || ||| ||||  |    ||| |||||||| |||  ||||||||| ||||||||||||||||||| |||||||||    
T  43281771 gtatgttcatattataatgttccaaaaatgtcaagaacgagtcaaaattatatccattaaggaccaaaaacaaaacaaa 43281849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 578465 - 578537
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    |||||||||| ||||| | || ||||||||||| ||||||||||||||||| ||| ||||||| | |||||||    
T  578465 gtgaggatgacaacattctattttattttttagggactaaaatcaaaattcactacatttatatggacgaaaa 578537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 65 - 141
Target Start/End: Complemental strand, 1944152 - 1944076
Alignment:
Q  65 agtccctaataaccaatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattat 141  Q
    ||||||||||  ||||||||| || |||| |||||||||||| ||| |||||||||||||| |||| ||||| ||||    
T  1944152 agtccctaatggccaatttatgttaatatgaatgtcaaaattatgagtcttttatgttcaaaatgtgttcatgttat 1944076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 28191524 - 28191460
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttatagg 312  Q
    |||||||||||||||| || | | ||||| ||  |||||||||||||||||||||||||||||||    
T  28191524 gtgaggatgaaaacattcagtttaattttgtacggactaaaatcaaaattcgctatatttatagg 28191460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 17642627 - 17642675
Alignment:
Q  272 attttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    ||||||||  |||||||||||||||||||||||||| |||| |||||||    
T  17642627 attttttaaggactaaaatcaaaattcgctatatttttagggacgaaaa 17642675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 296
Target Start/End: Original strand, 25954700 - 25954800
Alignment:
Q  197 aacatgtcaaaattgtatccattaaggaccaaaagcaaaa-caaannnnnnngtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaa 295  Q
    |||||||||||||| |||| |||| |||||||||  |||| ||||       ||||||||||||||||   || |||||||||||| |||||||||||||    
T  25954700 aacatgtcaaaattatatctattagggaccaaaaataaaaacaaaaaaatttgtgaggatgaaaacatctcattttattttttagaaactaaaatcaaaa 25954799  T
Q  296 t 296  Q
    |    
T  25954800 t 25954800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Original strand, 1944198 - 1944228
Alignment:
Q  272 attttttagagactaaaatcaaaattcgcta 302  Q
    |||||||||||||||||||||||||||||||    
T  1944198 attttttagagactaaaatcaaaattcgcta 1944228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 4300659 - 4300613
Alignment:
Q  78 caatttatatttatattaatgtcaaaattttgactcttttatgttca 124  Q
    |||||||| ||||||||||| |||||||| ||||| |||||||||||    
T  4300659 caatttatgtttatattaatatcaaaattatgacttttttatgttca 4300613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 320
Target Start/End: Original strand, 24895742 - 24895808
Alignment:
Q  254 atgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    |||||||||| |||| ||||||| ||| |||||||||||||||| | ||||||| || | |||||||    
T  24895742 atgaaaacattcaattttattttgtagggactaaaatcaaaatttgttatatttgtaaggacgaaaa 24895808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 27002774 - 27002836
Alignment:
Q  82 ttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattatatc 144  Q
    ||||||| |||| |||||||||||| | | ||||||||||||||  ||||||||| |||||||    
T  27002774 ttatattcatatgaatgtcaaaattataattcttttatgttcaaattgtattcatgttatatc 27002836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 35665541 - 35665635
Alignment:
Q  200 atgtcaaaattgtatccattaaggaccaaaagcaaaacaaannnnnnngtgaggatgaaaacatacaatgttattttttagagactaaaatcaaa 294  Q
    ||||||||||| ||||||||| ||||||||   ||||||||       ||||||||||||||||   || ||| ||||||| |||||||||||||    
T  35665541 atgtcaaaattatatccattagggaccaaatataaaacaaaaatttttgtgaggatgaaaacatctcattttagtttttagggactaaaatcaaa 35665635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 654241 - 654313
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    ||||||||||||||||||  | | | ||||||  || |||||| |||||| | ||||||||||||||||||||    
T  654241 gtgaggatgaaaacatacggtttaactttttatggattaaaataaaaatttgttatatttataggaacgaaaa 654313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 7876244 - 7876180
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttatagg 312  Q
    |||||||||||||||| || | | ||||||||| || | ||||||||||||  ||||||||||||    
T  7876244 gtgaggatgaaaacattcagtttaattttttagggatttaaatcaaaattcattatatttatagg 7876180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 12496881 - 12496921
Alignment:
Q  272 attttttagagactaaaatcaaaattcgctatatttatagg 312  Q
    |||||||||  ||||||||||||||||| ||||||||||||    
T  12496881 attttttaggaactaaaatcaaaattcgttatatttatagg 12496921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 30956153 - 30956217
Alignment:
Q  77 ccaatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattat 141  Q
    ||||||||  || |||| |||||||| ||| | ||||||||||| ||||||||||||||| ||||    
T  30956153 ccaatttaggttcatataaatgtcaagattataactcttttatggtcaagatgtattcatgttat 30956217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 312
Target Start/End: Original strand, 34196828 - 34196892
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttatagg 312  Q
    ||||||||||||| |   ||| |||||||||||  | || |||||||||||||||||||||||||    
T  34196828 gtgaggatgaaaataattaattttattttttaggaaatataatcaaaattcgctatatttatagg 34196892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 310
Target Start/End: Complemental strand, 23757531 - 23757309
Alignment:
Q  90 atattaatgtcaaaattttgactcttttatgttcaagatgtattcatattatatcgatttattgtcttcaaccctaataggtccatcttatgctcaacaa 189  Q
    |||| |||||||||||| | |||||||||||||||||||||||  || |||| ||  |||||| | ||||||| | |||  | ||| | ||| |||| ||    
T  23757531 atataaatgtcaaaattataactcttttatgttcaagatgtatctatgttatgtccgtttattatgttcaacctttatatattcatataatgttcaaaaa 23757432  T
Q  190 --tgtcaataacatgtcaaaattgtatccattaaggaccaaaagcaaaacaaannnnnnngtgaggatgaaaacatacaatgttattttttagagactaa 287  Q
      |||||| ||||||| ||| || |||||||||||||||||||  ||||||||       ||||||||||||||||   || ||||||||||| || |||    
T  23757431 aatgtcaaaaacatgttaaagttatatccattaaggaccaaaaataaaacaaaaaaatttgtgaggatgaaaacatctcattttattttttagggattaa 23757332  T
Q  288 aatcaaaattcgctatatttata 310  Q
    ||| |||||| ||||||||||||    
T  23757331 aattaaaatttgctatatttata 23757309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 158972 - 159032
Alignment:
Q  252 ggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttatagg 312  Q
    |||||||||||| |||| | |||||| || ||||||||| |||||||| ||||||||||||    
T  158972 ggatgaaaacattcaatttaatttttaagggactaaaataaaaattcgttatatttatagg 159032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 312
Target Start/End: Original strand, 15249554 - 15249650
Alignment:
Q  216 cattaaggaccaaaagcaaaacaaannnnnnngtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttatagg 312  Q
    ||||||||||||||| ||||| |||       ||||||||||||||||   || ||||||||||| ||| |||||||||||| | ||| ||||||||    
T  15249554 cattaaggaccaaaaacaaaataaaaaattttgtgaggatgaaaacatctcattttattttttagtgacgaaaatcaaaatttgatatgtttatagg 15249650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 248 - 311
Target Start/End: Original strand, 33758120 - 33758183
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttatag 311  Q
    ||||| |||||||||| |||| | || ||| ||||||||||||||||||||  |||||||||||    
T  33758120 gtgagaatgaaaacattcaatttaatatttaagagactaaaatcaaaattcattatatttatag 33758183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 5986657 - 5986599
Alignment:
Q  71 taataaccaatttatatttatattaatgtcaaaattttgactcttttatgttcaagatg 129  Q
    |||| |||||||||| ||||||||||| |||||||| ||||||||| |  |||||||||    
T  5986657 taatgaccaatttatgtttatattaatctcaaaattatgactctttaaaattcaagatg 5986599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 310
Target Start/End: Original strand, 22210238 - 22210299
Alignment:
Q  249 tgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttata 310  Q
    ||||||||||||||| | || |||||| |||  || ||||||||||||||| ||||||||||    
T  22210238 tgaggatgaaaacattctattttatttgttaaggaataaaatcaaaattcgttatatttata 22210299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 1691546 - 1691615
Alignment:
Q  251 aggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    ||||||||||||| || | | ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1691546 aggatgaaaacattcagtttaattttttagagactaaaatcaaaattcgctatatttatagggacgaaaa 1691615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 33261979 - 33262048
Alignment:
Q  251 aggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    ||||||||||||| || | | ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  33261979 aggatgaaaacattcagtttaattttttagggactaaaatcaaaattagctatatttataggaacgaaaa 33262048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 33282138 - 33282207
Alignment:
Q  251 aggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    ||||||||||||| || | | ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  33282138 aggatgaaaacattcagtttaattttttagggactaaaatcaaaattagctatatttataggaacgaaaa 33282207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 10840332 - 10840408
Alignment:
Q  65 agtccctaataaccaatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattat 141  Q
    ||||||||||||||||||||| || ||||||||||||| ||| ||| ||||||||||| || |||| ||||| ||||    
T  10840332 agtccctaataaccaatttatgttcatattaatgtcaagattatgattcttttatgtttaaaatgtgttcatgttat 10840408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 33261956 - 33261791
Alignment:
Q  66 gtccctaataaccaatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattatatcgatttattgtcttcaacccta 165  Q
    |||| |||| |||| ||||| || || | ||||| |||||| | ||| ||||||||||||  ||||| |||||||| |   |||||| | ||||||| |     
T  33261956 gtccttaatgaccactttatgttcatgtgaatgtaaaaattataacttttttatgttcaaattgtatccatattatgtatgtttattatgttcaaccttt 33261857  T
Q  166 ataggtccatcttatgctcaacaa-tgtcaataacatgtcaaaattgtatccattaaggaccaaaa 230  Q
    |||  | ||| ||||| |||| || |||||  |||||||||||||| |||||||||||||||||||    
T  33261856 atatattcatattatgttcaaaaaatgtcacaaacatgtcaaaattatatccattaaggaccaaaa 33261791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 33282115 - 33281950
Alignment:
Q  66 gtccctaataaccaatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattatatcgatttattgtcttcaacccta 165  Q
    |||| |||| |||| ||||| || || | ||||| |||||| | ||| ||||||||||||  ||||| |||||||| |   |||||| | ||||||| |     
T  33282115 gtccttaatgaccactttatgttcatgtgaatgtaaaaattataacttttttatgttcaaattgtatccatattatgtatgtttattatgttcaaccttt 33282016  T
Q  166 ataggtccatcttatgctcaacaa-tgtcaataacatgtcaaaattgtatccattaaggaccaaaa 230  Q
    |||  | ||| ||||| |||| || |||||  |||||||||||||| |||||||||||||||||||    
T  33282015 atatattcatattatgttcaaaaaatgtcacaaacatgtcaaaattatatccattaaggaccaaaa 33281950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 290
Target Start/End: Complemental strand, 27086141 - 27085997
Alignment:
Q  147 tttattgtcttcaaccctaataggtccatcttatgctcaacaatgtcaataacatgtcaaaattgtatccattaaggaccaaaagcaaaacaaannnnnn 246  Q
    |||||||| ||||||| | |||  | ||| ||||| || | |||||||| || ||||||||||| ||| ||||| |||||||||  ||||||||          
T  27086141 tttattgtgttcaaccttcatatattcatattatgttctaaaatgtcaaaaatatgtcaaaattatattcattagggaccaaaaataaaacaaaaaaatt 27086042  T
Q  247 ngtgaggatgaaaacat-acaatgttattttttagagactaaaat 290  Q
     ||||||||||||||||  || | ||||||||||| |||||||||    
T  27086041 tgtgaggatgaaaacatctcatttttattttttagggactaaaat 27085997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 310
Target Start/End: Complemental strand, 14398074 - 14398012
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttata 310  Q
    |||||||||||||||| || | | |||||||||  ||||||||||||||| | ||||||||||    
T  14398074 gtgaggatgaaaacattcagtttaattttttaggaactaaaatcaaaattagttatatttata 14398012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 310
Target Start/End: Original strand, 49457999 - 49458037
Alignment:
Q  272 attttttagagactaaaatcaaaattcgctatatttata 310  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  49457999 attttttagagactaaaattaaaattcgctacatttata 49458037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 49457826 - 49457786
Alignment:
Q  200 atgtcaaaattgtatccattaaggaccaaaagcaaaacaaa 240  Q
    ||||||||||| |||||||| ||||||||||| ||||||||    
T  49457826 atgtcaaaattatatccatttaggaccaaaagtaaaacaaa 49457786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 26032332 - 26032260
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    |||||||||||||||| || | | ||||||||| || |||||||||||||||||||||||||||| |||||||    
T  26032332 gtgaggatgaaaacattcagtttaattttttagggattaaaatcaaaattcgctatatttatagggacgaaaa 26032260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 38445937 - 38446034
Alignment:
Q  215 ccattaaggaccaaaagcaaaacaaannnnnnngtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttatagg 312  Q
    |||||||||||||||||||||| |||       |||||| ||||||||| || | | ||||||||| |||||||||||||||||||| ||||||||||    
T  38445937 ccattaaggaccaaaagcaaaataaattattttgtgaggttgaaaacattcagtttaattttttagggactaaaatcaaaattcgctgtatttatagg 38446034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 188 - 298
Target Start/End: Complemental strand, 17436583 - 17436473
Alignment:
Q  188 aatgtcaataacatgtcaaaattgtatccattaaggaccaaaagcaaaacaaannnnnnngtgaggatgaaaacatacaatgttattttttagagactaa 287  Q
    |||||||| ||||||||||||| || |||||||  ||| |||| |||||||||       |||| ||||||||||| || | |||||||||||||| |||    
T  17436583 aatgtcaagaacatgtcaaaatagtttccattagagactaaaaacaaaacaaaaagctttgtgaagatgaaaacattcagttttattttttagagattaa 17436484  T
Q  288 aatcaaaattc 298  Q
    |||||||||||    
T  17436483 aatcaaaattc 17436473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 32892431 - 32892488
Alignment:
Q  253 gatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttata 310  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||||||||||| ||||    
T  32892431 gatgaaaacattcaattttattttatagagactaaaatcaaaattcgctatatctata 32892488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 312
Target Start/End: Original strand, 40972123 - 40972187
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttatagg 312  Q
    |||||||| ||||||| | || ||||||||||| |||||||||||||||||| ||||||||||||    
T  40972123 gtgaggataaaaacattctattttattttttagggactaaaatcaaaattcgttatatttatagg 40972187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 30641729 - 30641783
Alignment:
Q  78 caatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtat 132  Q
    |||||||| || ||||||||||||| ||| | |||||||||||||||||||||||    
T  30641729 caatttatgttcatattaatgtcaagattatcactcttttatgttcaagatgtat 30641783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 36060764 - 36060812
Alignment:
Q  272 attttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    ||||||||| ||||||||||||||||| |||||||| ||| ||||||||    
T  36060764 attttttagggactaaaatcaaaattcactatatttttagaaacgaaaa 36060812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 307
Target Start/End: Original strand, 756924 - 756982
Alignment:
Q  249 tgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatattt 307  Q
    |||||||||||||||    | |||||||||||||||||||||||||||| ||| |||||    
T  756924 tgaggatgaaaacattgcgttttattttttagagactaaaatcaaaatttgctttattt 756982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 7630643 - 7630693
Alignment:
Q  270 ttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    ||||||||||| |||||||||||||||| | |||||||||||  |||||||    
T  7630643 ttattttttagggactaaaatcaaaatttgatatatttatagagacgaaaa 7630693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 320
Target Start/End: Complemental strand, 38445730 - 38445680
Alignment:
Q  270 ttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    |||| ||||||||||||||||||||||| | || ||||||||| |||||||    
T  38445730 ttatattttagagactaaaatcaaaatttgatacatttatagggacgaaaa 38445680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 40971922 - 40971862
Alignment:
Q  250 gaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttata 310  Q
    ||||||||||||||   || ||||||||||| ||||||||||||||||   ||||||||||    
T  40971922 gaggatgaaaacatctcattttattttttagggactaaaatcaaaatttattatatttata 40971862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 11692235 - 11692171
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttatagg 312  Q
    ||||||||||||||||  | | | |||||||||||||||||||||||||||||||||||||||||    
T  11692235 gtgaggatgaaaacattaagtttaattttttagagactaaaatcaaaattcgctatatttatagg 11692171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 17947241 - 17947354
Alignment:
Q  199 catgtcaaaattgtatccattaaggaccaaaagcaaaacaaannnnnnngtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattc 298  Q
    |||||||||||| |||||||||||||| ||||  ||| ||||       ||||||||||||||||   || ||||||||||| ||||||||||||||||     
T  17947241 catgtcaaaattatatccattaaggacaaaaaataaagcaaatttttttgtgaggatgaaaacatctcattttattttttagggactaaaatcaaaattt 17947340  T
Q  299 gctatatttatagg 312  Q
    | ||||||||||||    
T  17947341 gatatatttatagg 17947354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 51203305 - 51203233
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    |||||||||||| ||| | || ||||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  51203305 gtgaggatgaaagcattctattttattttttagggactaaaatcaaaattcgcaatatttatagggacgaaaa 51203233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 31792708 - 31792636
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    ||||||||||||||||   || |||||||||||| ||||||||||||||| | |||||||||||| |||||||    
T  31792708 gtgaggatgaaaacatttcattttattttttagaaactaaaatcaaaatttgatatatttatagggacgaaaa 31792636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 5521529 - 5521579
Alignment:
Q  270 ttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    ||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  5521529 ttattttttaaggactaaaatcaaaattcgctatatttatagggacgaaaa 5521579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 48798541 - 48798595
Alignment:
Q  78 caatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtat 132  Q
    |||||||| || ||||||||||||| ||| | |||||||||||||||||||||||    
T  48798541 caatttatgttcatattaatgtcaagattatcactcttttatgttcaagatgtat 48798595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 310
Target Start/End: Complemental strand, 5521293 - 5521232
Alignment:
Q  249 tgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttata 310  Q
    |||||||||||||||   || | |||||||||||||| |||||||||||||||| |||||||    
T  5521293 tgaggatgaaaacatctcatttgattttttagagacttaaatcaaaattcgctacatttata 5521232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 33414298 - 33414355
Alignment:
Q  250 gaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatattt 307  Q
    |||||||||||||  || | ||||||||||| || |||||||||||||||||||||||    
T  33414298 gaggatgaaaacaatcagttttattttttagggattaaaatcaaaattcgctatattt 33414355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 41609326 - 41609394
Alignment:
Q  251 aggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    ||||||||||||| |||| |||||| | || || |||||||||||||||||||||| ||| |||||||||    
T  41609326 aggatgaaaacattcaattttatttat-agggattaaaatcaaaattcgctatattcataagaacgaaaa 41609394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 52131992 - 52131928
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttatagg 312  Q
    |||||||||||||||| || | | ||||||||  |||||||||||||||||| ||||||| ||||    
T  52131992 gtgaggatgaaaacattcattttaattttttatggactaaaatcaaaattcgttatatttgtagg 52131928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 5521466 - 5521384
Alignment:
Q  79 aatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattatatcgatttattgtcttcaac 161  Q
    ||||||| || |||| |||| ||| ||| | ||||||||||| ||||||||||| ||| ||||||| ||||||| | ||||||    
T  5521466 aatttatgttcatataaatgccaagattataactcttttatggtcaagatgtatccatgttatatctatttattatgttcaac 5521384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 320
Target Start/End: Original strand, 40154667 - 40154713
Alignment:
Q  274 tttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    ||||||||||||||||||||| || | |||||||||||| |||||||    
T  40154667 tttttagagactaaaatcaaattttgatatatttatagggacgaaaa 40154713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 41823851 - 41823900
Alignment:
Q  257 aaaacatacaatgttattttttagagactaaaatcaaaattcgctatatt 306  Q
    ||||||| | || |||||||||| ||||||||||||||||| ||||||||    
T  41823851 aaaacattctattttattttttaaagactaaaatcaaaatttgctatatt 41823900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 320
Target Start/End: Complemental strand, 41609148 - 41609039
Alignment:
Q  212 tatccattaaggaccaaaagcaaaacaaannnnnnngtgaggatgaaaacatacaatgtt-attttttagagactaaaatcaaaattcgctatatttata 310  Q
    |||||||||||||||||||  ||||||||       ||||||||||||||||  ||| || |||||  || |||||||||  ||||| | ||||||||||    
T  41609148 tatccattaaggaccaaaactaaaacaaaaaaatttgtgaggatgaaaacatctaattttaattttgcagggactaaaatataaatttgttatatttata 41609049  T
Q  311 ggaacgaaaa 320  Q
    ||||| ||||    
T  41609048 ggaacaaaaa 41609039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 66 - 161
Target Start/End: Original strand, 51107785 - 51107880
Alignment:
Q  66 gtccctaataaccaatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattatatcgatttattgtcttcaac 161  Q
    |||||||||||||||||||| || |||| |||||||| ||| ||| |||||||||||||| |||| ||||| |||||||  |||||| | ||||||    
T  51107785 gtccctaataaccaatttattttaatatgaatgtcaagattatgagtcttttatgttcaaaatgtgttcattttatatctgtttattatgttcaac 51107880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 16024808 - 16024878
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaa 318  Q
    ||||||||||||||||   || ||||||||||| |||||||||||||||| | |||||||||||| |||||    
T  16024808 gtgaggatgaaaacatctcattttattttttagggactaaaatcaaaatttgatatatttatagggacgaa 16024878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 323 - 387
Target Start/End: Original strand, 38683939 - 38684006
Alignment:
Q  323 ttttggtgcttcatctacacccactttcagtgg---ttcttccctcttctcagcaccgttctctgctc 387  Q
    |||||||||||| ||||||||| ||||| ||||   |||||||||||||||| |||||||||||||||    
T  38683939 ttttggtgcttcttctacacccgctttcggtggtggttcttccctcttctcaacaccgttctctgctc 38684006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 54141461 - 54141402
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatattt 307  Q
    |||||||||||||||| |||| ||||||||||   |||| ||||||||||||||||||||    
T  54141461 gtgaggatgaaaacattcaattttattttttaagaactacaatcaaaattcgctatattt 54141402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 39300641 - 39300695
Alignment:
Q  78 caatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtat 132  Q
    |||||||| || ||||||||||||| ||| | |||||||||||||||||||||||    
T  39300641 caatttatgttcatattaatgtcaagattatcactcttttatgttcaagatgtat 39300695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 54394386 - 54394320
Alignment:
Q  254 atgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    |||||||||| |||| | ||||||||| |||||||||||||||||  |||| ||||| |||||||||    
T  54394386 atgaaaacattcaatttaattttttagggactaaaatcaaaattctttatagttataagaacgaaaa 54394320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 1742053 - 1741980
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaat 321  Q
    ||||||||||||||||   || ||||||||||| || ||||||||||||| | |||||||||||| | ||||||    
T  1742053 gtgaggatgaaaacatctcattttattttttagggattaaaatcaaaatttgatatatttatagggatgaaaat 1741980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 309
Target Start/End: Complemental strand, 16024606 - 16024545
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttat 309  Q
    |||| ||||||||||| || | | ||||||||| || |||||||||||||||||||||||||    
T  16024606 gtgaagatgaaaacattcagtttaattttttagggattaaaatcaaaattcgctatatttat 16024545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 307
Target Start/End: Original strand, 18360930 - 18360963
Alignment:
Q  274 tttttagagactaaaatcaaaattcgctatattt 307  Q
    ||||||||||||||||||||||||||||||||||    
T  18360930 tttttagagactaaaatcaaaattcgctatattt 18360963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 33309735 - 33309662
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgc-tatatttataggaacgaaaa 320  Q
    |||||||||||||||| |  | ||||||||||| ||||||||||||||||| | ||||||| |||| |||||||    
T  33309735 gtgaggatgaaaacatcccgttttattttttagggactaaaatcaaaattcacttatatttttagggacgaaaa 33309662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 31989888 - 31989816
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    |||||||||||||| | |||| | ||||||||| ||||||||| |||||| | |||||||||| | |||||||    
T  31989888 gtgaggatgaaaacgttcaatttaattttttagggactaaaatgaaaatttgatatatttatatggacgaaaa 31989816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 66 - 240
Target Start/End: Complemental strand, 28259974 - 28259799
Alignment:
Q  66 gtccctaataaccaatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattatatcgatttattgtcttcaacccta 165  Q
    |||||||||  ||||||||| ||  ||| |||||||| ||| |||||||||||| ||||| |||| ||||| |||| ||  |||||| | ||||||  |     
T  28259974 gtccctaatggccaatttatgttattatgaatgtcaagattatgactcttttattttcaaaatgtgttcatgttatgtctgtttattatgttcaactttt 28259875  T
Q  166 ataggtccatcttatgctcaac-aatgtcaataacatgtcaaaattgtatccattaaggaccaaaagcaaaacaaa 240  Q
     || || ||| ||||| | ||| |||||||| |||| ||||||||| | | | ||| ||||||||| |||||||||    
T  28259874 gtatgttcatattatgttaaacaaatgtcaagaacacgtcaaaattattttcgttagggaccaaaaacaaaacaaa 28259799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 319
Target Start/End: Original strand, 31990093 - 31990220
Alignment:
Q  192 tcaataacatgtcaaaattgtatccattaaggaccaaaagcaaaacaaannnnnnngtgaggatgaaaacatacaatgttattttttagagactaaaatc 291  Q
    |||| |||||||||||||| ||||||||| |||||||||  ||||||||       || |||| ||||| ||   || || ||| |||| |||||||||     
T  31990093 tcaaaaacatgtcaaaattatatccattagggaccaaaaataaaacaaaaaattttgtaaggaggaaaatatctcattttgtttcttagggactaaaatt 31990192  T
Q  292 aaaattcgctatatttataggaacgaaa 319  Q
    |||||| | |||||||||||| ||||||    
T  31990193 aaaatttgatatatttatagggacgaaa 31990220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 33309786 - 33309832
Alignment:
Q  86 atttatattaatgtcaaaattttgactcttttatgttcaagatgtat 132  Q
    |||||| |||||||||| ||| | |||||||||||||||||||||||    
T  33309786 atttatgttaatgtcaagattatcactcttttatgttcaagatgtat 33309832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 46795728 - 46795686
Alignment:
Q  90 atattaatgtcaaaattttgactcttttatgttcaagatgtat 132  Q
    ||||||||||||| ||| | |||||||||||||||||||||||    
T  46795728 atattaatgtcaatattatcactcttttatgttcaagatgtat 46795686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 31993670 - 31993633
Alignment:
Q  270 ttattttttagagactaaaatcaaaattcgctatattt 307  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  31993670 ttatttttaagagactacaatcaaaattcgctatattt 31993633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 305
Target Start/End: Original strand, 33309949 - 33310006
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatat 305  Q
    |||||||||||||||  |  | ||||||||||| ||||||||| ||||||||||||||    
T  33309949 gtgaggatgaaaacaccccgttttattttttagggactaaaataaaaattcgctatat 33310006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 49548524 - 49548487
Alignment:
Q  270 ttattttttagagactaaaatcaaaattcgctatattt 307  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  49548524 ttattttttagagaccaaaatcaaaatttgctatattt 49548487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 28260019 - 28260066
Alignment:
Q  272 attttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    |||||||| ||||||||||||||||| ||||||||| |||| |||||||    
T  28260019 atttttta-agactaaaatcaaaatttgctatatttttagggacgaaaa 28260066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 353524 - 353464
Alignment:
Q  66 gtccctaataaccaatttatatttatattaatgtcaaaattttgactcttttatgttcaag 126  Q
    ||||||||| |||||||||| |||||||||||||||| ||| |||||||||||| ||||||    
T  353524 gtccctaattaccaatttatgtttatattaatgtcaatattatgactcttttatattcaag 353464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 320
Target Start/End: Original strand, 4096723 - 4096843
Alignment:
Q  200 atgtcaaaattgtatccattaaggaccaaaagcaaaacaaannnnnnngtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcg 299  Q
    ||||||||||| ||||||||||||| ||||| |||||||||       |||| |||||||||||   || | ||||||||| || ||||||||||||| |    
T  4096723 atgtcaaaattatatccattaaggaacaaaaacaaaacaaaaaaatttgtgatgatgaaaacatctcatttaattttttagggattaaaatcaaaatttg 4096822  T
Q  300 ctatatttataggaacgaaaa 320  Q
     | |||||||||| |||||||    
T  4096823 atttatttatagggacgaaaa 4096843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 3014393 - 3014477
Alignment:
Q  77 ccaatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattatatcgatttattgtcttcaac 161  Q
    |||||||||||| |||| ||| |||| ||| | ||||||||||| ||||||||||| ||| |||||||  |||||||| ||||||    
T  3014393 ccaatttatattcatataaatatcaagattataactcttttatggtcaagatgtatccatgttatatccgtttattgtgttcaac 3014477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 316
Target Start/End: Original strand, 31836882 - 31836942
Alignment:
Q  255 tgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacg 316  Q
    ||||||||| |||| ||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  31836882 tgaaaacattcaat-ttaatttttaggggctaaaatcaaaattcgctatatttataagaacg 31836942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 1111963 - 1112015
Alignment:
Q  188 aatgtcaataacatgtcaaaattgtatccattaaggaccaaaagcaaaacaaa 240  Q
    |||||||| |||||||||||||| |||| |||| | |||||||| ||||||||    
T  1111963 aatgtcaaaaacatgtcaaaattatatcgattaggaaccaaaagtaaaacaaa 1112015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 1428939 - 1428879
Alignment:
Q  70 ctaataaccaatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgt 130  Q
    ||||| |||||||||| || |||| |||||||| ||| ||| |||||||||||||| ||||    
T  1428939 ctaatgaccaatttatgttaatatgaatgtcaagattatgagtcttttatgttcaaaatgt 1428879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 320
Target Start/End: Original strand, 30219031 - 30219102
Alignment:
Q  249 tgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    ||||||||||||||| || | |  |||| ||| ||||||||||||||||||||||||||||| | |||||||    
T  30219031 tgaggatgaaaacattcagtttagttttgtagggactaaaatcaaaattcgctatatttataaggacgaaaa 30219102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 320
Target Start/End: Original strand, 39187701 - 39187768
Alignment:
Q  253 gatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    |||||||||||   || ||||||| || ||||||||||||||||||  ||||||||||||||||||||    
T  39187701 gatgaaaacatctcattttattttctaaagactaaaatcaaaattcattatatttataggaacgaaaa 39187768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 14585187 - 14585116
Alignment:
Q  80 atttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattatatcgatttatt 152  Q
    ||||||||| ||||||||||||||| | ||||| |||||||||||| |||| ||||| |||| || |||||||    
T  14585187 atttatattcatattaatgtcaaaaatatgact-ttttatgttcaatatgtgttcatgttatgtcaatttatt 14585116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 320
Target Start/End: Complemental strand, 30218869 - 30218761
Alignment:
Q  212 tatccattaaggaccaaaagcaaaacaaannnnnnngtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttatag 311  Q
    |||||||||||||| |||| ||||| |||       |||||||||||||||| || | | ||||| |||  | ||||||||||||||| ||||||||||     
T  30218869 tatccattaaggacgaaaaacaaaataaaaaattatgtgaggatgaaaacattcagtttaattttataggaattaaaatcaaaattcgttatatttatat 30218770  T
Q  312 gaacgaaaa 320  Q
    | |||||||    
T  30218769 ggacgaaaa 30218761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 310
Target Start/End: Complemental strand, 2146009 - 2145947
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttata 310  Q
    |||||||| ||||||| |||| | ||||||||  || |||||| |||||||||||||||||||    
T  2146009 gtgaggataaaaacattcaatttaattttttaaggattaaaataaaaattcgctatatttata 2145947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 310
Target Start/End: Complemental strand, 33004937 - 33004875
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttata 310  Q
    ||||| |||||||||| |||| | |||||||| |||||||||||||||||   ||||||||||    
T  33004937 gtgagaatgaaaacattcaatttaattttttaaagactaaaatcaaaatttaatatatttata 33004875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 25245412 - 25245351
Alignment:
Q  80 atttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattat 141  Q
    |||||| || |||| |||||||| ||| | ||||||||||| ||||||||||||||| ||||    
T  25245412 atttatgttcatataaatgtcaagattataactcttttatgatcaagatgtattcatgttat 25245351  T

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Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 15999057 - 15998986
Alignment:
Q  80 atttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtattcatattatatcgatttatt 152  Q
    ||||||||| ||||||||||||||| | ||||| |||||||||||| ||||  |||| |||| || |||||||    
T  15999057 atttatattcatattaatgtcaaaaatatgact-ttttatgttcaatatgtcctcatgttatgtcaatttatt 15998986  T

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Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 18503651 - 18503579
Alignment:
Q  248 gtgaggatgaaaacatacaatgttattttttagagactaaaatcaaaattcgctatatttataggaacgaaaa 320  Q
    ||||||||||||||||   || ||||||||||| ||  |||||||||||| | |||||||||| | |||||||    
T  18503651 gtgaggatgaaaacatctcattttattttttagggataaaaatcaaaatttgatatatttataaggacgaaaa 18503579  T

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Target: scaffold0275 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 9087 - 9141
Alignment:
Q  78 caatttatatttatattaatgtcaaaattttgactcttttatgttcaagatgtat 132  Q
    |||||||| || ||||||||||||| ||| | |||||||||||||||||||||||    
T  9087 caatttatgttcatattaatgtcaagattatcactcttttatgttcaagatgtat 9141  T

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