View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2903R-Insertion-2 (Length: 935)
Name: NF2903R-Insertion-2
Description: NF2903R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2903R-Insertion-2 |
 |  |
|
| [»] chr8 (4 HSPs) |
 |  |
|
Alignment Details
Target: chr8 (Bit Score: 672; Significance: 0; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 672; E-Value: 0
Query Start/End: Original strand, 8 - 935
Target Start/End: Original strand, 35151972 - 35152910
Alignment:
| Q |
8 |
aattccgaagttcaacttgtcttttataacactttgcttattgctgctaattattagtgatcagtgattgtattataggcttatcatgttgtccaactct |
107 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
35151972 |
aattccgaaattcaacttgtcttttataacactttgcttattgctgctaattattagtgatcagtgattgtattataggtttatcatgttgtccaactct |
35152071 |
T |
 |
| Q |
108 |
ctaaaataacttgattgacaaatacactccgacctaaaaaccaacattgatttgtaatatcggatagattttgtgtaattgagaactacaattcattaaa |
207 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
35152072 |
ctacaataacttgattgacaaatacactccgacctaaaaaccaacattgatttgaaatatcggatagattttgtgtaattgagaactacaattcgttaaa |
35152171 |
T |
 |
| Q |
208 |
tttaaagggcttttgagcaatacaagagacttcgattatcacattatggttcaattaaatttatcgtatcggttaattgaatcgaactaaattgaaatta |
307 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| | |||||||||||| |||| ||||||||||||| |
|
|
| T |
35152172 |
tttaaagggcttttgagcaatacgagagacttcgactatcacattatggttcaattaaatttatcgaaccggttaattgaaccgaattaaattgaaatta |
35152271 |
T |
 |
| Q |
308 |
actgaaccatttaagtggttcgtaaaccgaaccaataatttaataacggttattgaaccataaccgaactgttt-aactgaattgaactgtttggaaccg |
406 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| ||| ||||||||||||||||| |
|
|
| T |
35152272 |
gttgaacaatttaagtggttcgtaaaccgaaccaataatttaataacagttattgaaccataatcgaactgtttgaaccgaactgaactgtttggaaccg |
35152371 |
T |
 |
| Q |
407 |
aactgaactattagc-aaagcacacactttacattctaataataaaattttattttgcctttcatcatgcattaacattggaatgtgttgatattagtaa |
505 |
Q |
| |
|
|||| ||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
35152372 |
aactcaaccattaccaaaagcacacactttacattctaataataaaattttattttgcctttcatcatgcattaacattgaaatttgttgatattagtaa |
35152471 |
T |
 |
| Q |
506 |
aatataactattaaaaccacaaaaaattaataactagtgtgatttaattcttaaaaaggcttaatacatttggtcatagtttaaatacaattaataaaaa |
605 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35152472 |
aatacaactattaaaaccacaaaaaattaataactagtgttatttaattcttaaaaaggcttaatacatttggtcatagtttaaatacaattaataaaaa |
35152571 |
T |
 |
| Q |
606 |
gtcttaatatatttttgggaggataacaattattaacactggtcgcacaattccaatttatgnnnnnnnnnnnnnncaatttggtttccaaaaagataag |
705 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |
|
|
| T |
35152572 |
gtcttaatatatttttgagaggataaaaattattaacactggtcgcacaattccaatttatgaaaaagaaaaaaa--aaattggttcccaaaaagataac |
35152669 |
T |
 |
| Q |
706 |
aaaacacattttgattcaaaatattattttaagttcgatttggttcggttcgcaaacaataaaacgattaaccgaaccataactttggtttagttcctta |
805 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
35152670 |
aaaacacattttgattcaaaatattattttaagttcgatttggttcggttcgcaaacaataaaacgattaaccgaaccataactttagtttagttcttta |
35152769 |
T |
 |
| Q |
806 |
taaagctcaaatgattcagttcgatttttcaaaccattgaagcagttttgttcgat---------ttttctttaaaaaccgaa-catgccaccccta-ct |
894 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| |||| || |||||||||||||||||| ||||||||||||| || |
|
|
| T |
35152770 |
taaagctcaaatgattcagttcaatttttcaaaccattgaagcagtttagttcaatttgattcgattttctttaaaaaccgaaccatgccacccctacct |
35152869 |
T |
 |
| Q |
895 |
accaccccgcaccccaac-acattgtattagcaaattaggat |
935 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
35152870 |
acca-cccgcaccccaacaacattgtattagcaaattaggat |
35152910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 516 - 641
Target Start/End: Complemental strand, 37199027 - 37198902
Alignment:
| Q |
516 |
ttaaaaccacaaaaaattaataactagtgtgatttaattcttaaaaaggcttaatacatttggtcatagtttaaatacaattaataaaaagtcttaatat |
615 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||| || ||| |
|
|
| T |
37199027 |
ttaaaaccacaaaaaattaatgacgagtgtgatttaattcttaaaaaagcttaatacatttggtcatagttgaaatataattaataaaaagactagatac |
37198928 |
T |
 |
| Q |
616 |
atttttgggaggataacaattattaa |
641 |
Q |
| |
|
|||||| |||||||| |||| |||| |
|
|
| T |
37198927 |
ctttttgagaggataaaaattcttaa |
37198902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 37199250 - 37199179
Alignment:
| Q |
297 |
aattgaaattaactgaaccatttaagtggttcgtaaaccgaaccaataatttaataacggttattgaaccata |
369 |
Q |
| |
|
|||| |||||||| ||||||||| |||||||||| |||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
37199250 |
aattaaaattaac-gaaccattttagtggttcgtgaaccagaccaataatttaataatggttattgaaccata |
37199179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 594 - 742
Target Start/End: Original strand, 15855569 - 15855718
Alignment:
| Q |
594 |
aattaataaaaagtcttaatatatttttgggaggataacaattattaacactggtcgcacaattccaatttatgnnnnnnnnnnnnnn--caatttggtt |
691 |
Q |
| |
|
||||||||||||||||| ||| ||||||| ||||||| |||| |||||||| || |||||||||||||||||| |||||||||| |
|
|
| T |
15855569 |
aattaataaaaagtcttgatacttttttgg-aggataaaaattcttaacacttgtggcacaattccaatttatgaaaaagaataaaaaaacaatttggtt |
15855667 |
T |
 |
| Q |
692 |
tccaaaaagataagaaaacacattttgattcaaaatattattttaagttcg |
742 |
Q |
| |
|
||||| |||||||||| ||||||| |||||||||||||||||| ||||| |
|
|
| T |
15855668 |
cgcaaaaggataagaaaatacatttttattcaaaatattattttaggttcg |
15855718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 120; Significance: 7e-61; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 296 - 667
Target Start/End: Complemental strand, 32051296 - 32050931
Alignment:
| Q |
296 |
aaattgaaattaactgaaccatttaagtggttcgtaaaccgaaccaataatttaataacggttattgaaccataaccgaactgtttaactgaattgaact |
395 |
Q |
| |
|
|||||||||||||| |||||| ||||||||| | ||||||||| | |||||||||||||||||||||||||||| | ||| |||| |
|
|
| T |
32051296 |
aaattgaaattaaccgaaccaagtaagtggtttgcaaaccgaacaagtaatttaataacggttattgaaccataatcaaaccgtttt------------- |
32051210 |
T |
 |
| Q |
396 |
gtttggaaccgaactgaactattagcaaagcacacactttacattctaataataaaattttattttgcctttcatcatgcattaacattggaatgtgttg |
495 |
Q |
| |
|
|||| |||||||| |||||||||| ||| |||| | ||| ||||||| | ||||||||| | ||||||||||||||| ||||||||| ||||| |
|
|
| T |
32051209 |
-----gaacagaactgaatcattagcaaagtacaaacttcatattttaataatggatttttattttccatttcatcatgcattatcattggaatttgttg |
32051115 |
T |
 |
| Q |
496 |
atattagt------------aaaatataactattaaaaccacaaaaaattaataactagtgtgatttaattcttaaaaaggcttaatacatttggtcata |
583 |
Q |
| |
|
|| || | |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
32051114 |
atgtttttgttgatgttcctaaaatacaactaataaaaccacaataaattaataactagtgtgatttaattcttaaaaaggcttaatacattaggtcata |
32051015 |
T |
 |
| Q |
584 |
gtttaaatacaattaataaaaagtcttaatatatttttgggaggataacaattattaacactggtcgcacaattccaatttatg |
667 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||||||| |||||||| |||| |||||||| ||| ||||||||||||||||| |
|
|
| T |
32051014 |
gtttaaatttaataaataaaaagtcttaatatatttttgagaggataaaaattcttaacacttgtctcacaattccaatttatg |
32050931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 517 - 667
Target Start/End: Original strand, 25970097 - 25970246
Alignment:
| Q |
517 |
taaaaccacaaaaaattaataactagtgtgatttaattcttaaaaaggcttaatacatttggtcatagtttaaatacaattaataaaaagtcttaatata |
616 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||| ||||||||| ||||| ||||||| |||||||| |||| ||||||||||||||||||||| | |
|
|
| T |
25970097 |
taaaaccacaaaaaattaataattgatgtgatttaatttttaaaaaggtttaatgcatttggccatagtttgaatataattaataaaaagtcttaataca |
25970196 |
T |
 |
| Q |
617 |
tttttgggaggataacaattattaacactggtcgcacaattccaatttatg |
667 |
Q |
| |
|
||||| |||||||| ||||||||| || || ||||||| |||||||||| |
|
|
| T |
25970197 |
-ttttgagaggataaaaattattaatacatgtagcacaataccaatttatg |
25970246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 682 - 792
Target Start/End: Complemental strand, 32050914 - 32050804
Alignment:
| Q |
682 |
caatttggtttccaaaaagataagaaaacacattttgattcaaaatattattttaagttcgatttggttcggttcgcaaacaataaaacgattaaccgaa |
781 |
Q |
| |
|
||||||||||| || | |||||||||| | ||| || |||||||||| |||||| ||| |||||||||| |||| |||||| |||| | |||| |||| |
|
|
| T |
32050914 |
caatttggtttgtaagaggataagaaaatagattgtggttcaaaatatcattttaggtttaatttggttcgattcgtaaacaacaaaatggttaatcgaa |
32050815 |
T |
 |
| Q |
782 |
ccataactttg |
792 |
Q |
| |
|
| ||||||||| |
|
|
| T |
32050814 |
ctataactttg |
32050804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 682 - 727
Target Start/End: Original strand, 25970263 - 25970308
Alignment:
| Q |
682 |
caatttggtttccaaaaagataagaaaacacattttgattcaaaat |
727 |
Q |
| |
|
|||||||||| ||||| |||||||||| ||||||||||||||||| |
|
|
| T |
25970263 |
caatttggttcgcaaaaggataagaaaatacattttgattcaaaat |
25970308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 112; Significance: 4e-56; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 303 - 614
Target Start/End: Complemental strand, 11846616 - 11846292
Alignment:
| Q |
303 |
aattaactgaaccatttaagtggttcgtaaaccgaaccaataatttaataacggttattgaaccataaccgaactgttt--aactgaattgaactgtttg |
400 |
Q |
| |
|
||||||||||||||||||||| | | || |||| |||| ||||||||||||| ||||||||||||||| || ||||| ||| |||| |||| ||| |
|
|
| T |
11846616 |
aattaactgaaccatttaagtagcttgtgaaccaaaccggtaatttaataacgattattgaaccataactgatatgttttgaaccgaatcgaaccatttt |
11846517 |
T |
 |
| Q |
401 |
gaaccgaactgaactattagcaaagcacacactttacattctaataataaaattttattttgcctttcatcatgcattaacattggaatg---------- |
490 |
Q |
| |
|
|||||||| ||| || |||||| |||| |||| | ||| ||| ||| || ||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
11846516 |
aaaccgaaccaaaccatcagcaaaacacaaacttcatattttaacaatgaagttttattttccctttcatcatgcattatcattggaattgttgatgttt |
11846417 |
T |
 |
| Q |
491 |
-tgttgatattagtaaaatataactattaaaaccacaaaaaattaataactagtgtgatttaattcttaaaaaggcttaatacatttggtcatagtttaa |
589 |
Q |
| |
|
|||||||||| ||||||| || || |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11846416 |
ttgttgatattcctaaaatacaaatagtaaaaccacaaaaaattaataaatagtgtgatttaattcttaaaaaggattaatacatttggtcatagtttaa |
11846317 |
T |
 |
| Q |
590 |
atacaattaataaaaagtcttaata |
614 |
Q |
| |
|
||| ||||||||||| ||||||||| |
|
|
| T |
11846316 |
atataattaataaaatgtcttaata |
11846292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 512 - 615
Target Start/End: Original strand, 10505859 - 10505962
Alignment:
| Q |
512 |
actattaaaaccacaaaaaattaataactagtgtgatttaattcttaaaaaggcttaatacatttggtcatagtttaaatacaattaataaaaagtctta |
611 |
Q |
| |
|
|||| |||||||||| ||||||||||| ||||||||||||||| ||||| | |||||| || || |||||| |||||||| |||| ||| ||| ||||| |
|
|
| T |
10505859 |
actagtaaaaccacactaaattaataaccagtgtgatttaattcataaaatgtcttaatccagttagtcataatttaaatataattcatacaaaatctta |
10505958 |
T |
 |
| Q |
612 |
atat |
615 |
Q |
| |
|
|||| |
|
|
| T |
10505959 |
atat |
10505962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 706 - 801
Target Start/End: Complemental strand, 790253 - 790158
Alignment:
| Q |
706 |
aaaacacattttgattcaaaatattattttaagttcgatttggttcggttcgcaaacaataaaacgattaaccgaaccataactttggtttagttc |
801 |
Q |
| |
|
|||| |||||||| ||||||||||| ||| ||||| || |||||||||| | || |||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
790253 |
aaaatacattttggttcaaaatattggttttggttcggttcggttcggttcataggtaagaaaacggttaaccgaaccataactttggttcagttc |
790158 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 689 - 731
Target Start/End: Complemental strand, 11846213 - 11846171
Alignment:
| Q |
689 |
gtttccaaaaagataagaaaacacattttgattcaaaatatta |
731 |
Q |
| |
|
|||| ||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
11846213 |
gtttacaaaaggataagaaaacacattttggttcaaaatatta |
11846171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 109; Significance: 2e-54; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 300 - 840
Target Start/End: Complemental strand, 39916215 - 39915671
Alignment:
| Q |
300 |
tgaaattaactgaaccatttaagtggttcgtaaaccgaaccaataatttaataacggttattgaaccataaccgaactgtttaactgaattgaactgttt |
399 |
Q |
| |
|
|||||||||| |||||||| |||||||| | |||||||||| ||||||||||| ||||||||||||||||| |||| ||| |||| ||| | |
|
|
| T |
39916215 |
tgaaattaaccgaaccattaaagtggtttgcgaaccgaaccagtaatttaataatggttattgaaccataactgaaccattt---tgaaccgaaata--- |
39916122 |
T |
 |
| Q |
400 |
ggaaccgaactgaactattagcaaagcacacactttacattctaataataaaattttattttgcctttcatcatgcattaacattggaatgt-------- |
491 |
Q |
| |
|
|||||||| ||| ||||| |||| ||| |||| | | ||||||| |||||||||||| |||||||||||||||| |||||||| | |
|
|
| T |
39916121 |
--aaccgaaccaaaccattagaaaagaacaaacttcgtagtttaataatgaaattttattttccctttcatcatgcattgtaattggaatttattaatgt |
39916024 |
T |
 |
| Q |
492 |
----gttgatattagtaaaatataactattaaaaccacaaaaaattaataactagtgtgatttaattcttaaaaaggcttaatacatttggtcatagttt |
587 |
Q |
| |
|
||||||||| ||||||| ||||| ||||||||||| ||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
39916023 |
ttttgttgatattcctaaaatacaactagtaaaaccacaagaaattaataaccggtgtgatttaatttttaaaaaggcttaatgcatttggtcatagttt |
39915924 |
T |
 |
| Q |
588 |
aaatacaattaataaaaagtcttaatatatttttgggaggataacaattattaacactggtcgcacaattccaatttatg-nnnnnnnnnnnnnncaatt |
686 |
Q |
| |
|
|||| |||||||||||||||| | || |||||| |||||||| | || ||||||| | |||||||||| |||||||| ||||| |
|
|
| T |
39915923 |
-aatataattaataaaaagtctcactaactttttgagaggataaaatttcttaacacccgccgcacaattcaaatttatgaaaagaacaaaaaaacaatt |
39915825 |
T |
 |
| Q |
687 |
tggtttccaaaaagataagaaaacacattttgattcaaaatattattttaagttcgatttggttcggttcgcaaacaataaaacgattaaccgaaccata |
786 |
Q |
| |
|
|||||| ||||| |||||||||| ||| ||| ||||||||||| |||| ||||| ||| ||||||| | | ||||||||||| |||||||||||||| |
|
|
| T |
39915824 |
tggtttgcaaaaggataagaaaatacactttagatcaaaatattactttaggttcggttttgttcggtctgtagacaataaaacggttaaccgaaccata |
39915725 |
T |
 |
| Q |
787 |
actttggtttagttccttataaagctcaaatgattcagttcgatttttcaaacc |
840 |
Q |
| |
|
||||||||| ||||||| ||| |||||| ||||| |||| ||||||||||| |
|
|
| T |
39915724 |
actttggttcggttccttgcaaaactcaaacgattcggttcagtttttcaaacc |
39915671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 296 - 489
Target Start/End: Complemental strand, 45618869 - 45618671
Alignment:
| Q |
296 |
aaattgaaattaactgaaccatttaagtggttcgtaaaccgaaccaataatttaataacggttattgaaccataaccgaactgttt--aactgaattgaa |
393 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||| | |||| ||||||||||| |||||| || |||| |||||||||| ||| || ||| |
|
|
| T |
45618869 |
aaattgaaattaaccgaaccatttaagtggttgaagaacctagccaacaatttaataacaattattggacaataatcgaactgttttgaaccaaactgat |
45618770 |
T |
 |
| Q |
394 |
ctgtttggaaccgaactgaactattagcaaagcacacactttacattctaataataaaattttattttgcctttcatca---tgcattaacattggaat |
489 |
Q |
| |
|
||||| || |||||| ||| ||||||||| |||| |||| | ||| ||||||| || ||||||||| |||||||||| ||||||| ||||||||| |
|
|
| T |
45618769 |
atgttttgagccgaaccaaaccattagcaaaacacaaacttcatattttaataatgaagttttattttccctttcatcatcgtgcattatcattggaat |
45618671 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 290 - 376
Target Start/End: Original strand, 9224782 - 9224868
Alignment:
| Q |
290 |
cgaactaaattgaaattaactgaaccatttaagtggttcgtaaaccgaaccaataatttaataacggttattgaaccataaccgaac |
376 |
Q |
| |
|
|||||| ||||||||||||| ||| |||||| ||||| || ||| ||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
9224782 |
cgaactgaattgaaattaacaaaactatttaattggtttgtgaactaaaccaataatttaataacggttaatgaaccataatcgaac |
9224868 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 682 - 801
Target Start/End: Complemental strand, 45618319 - 45618201
Alignment:
| Q |
682 |
caatttggtttccaaaaagataagaaaacacattttgattcaaaatattattttaagttcgatttggttcggttcgcaaacaataaaacgattaaccgaa |
781 |
Q |
| |
|
|||||| |||| ||||| |||||||||| |||||||| ||||||||||||||||| ||| | | | || ||||| | |||| |||| | |||||| || |
|
|
| T |
45618319 |
caatttagttttcaaaaggataagaaaatacattttggttcaaaatattattttaggtt-ggtcttttttggttcatagacaacaaaatggttaaccaaa |
45618221 |
T |
 |
| Q |
782 |
ccataactttggtttagttc |
801 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
45618220 |
ccataactttggttaagttc |
45618201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 585 - 787
Target Start/End: Original strand, 20792580 - 20792783
Alignment:
| Q |
585 |
tttaaatacaattaataaaaagtcttaatatatttttgggaggataacaa-ttattaacactggtcgcacaattccaatttatgnnnnnnnnnnnnnnca |
683 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| || | || || || | |||||| ||| ||||||||||||||||| | |
|
|
| T |
20792580 |
tttaaatagaattaataaaaagtcttaatatatttttgagaataaaaaaaattctcaacacttgtcacacaattccaatttatgaaaaagaaaaaaaata |
20792679 |
T |
 |
| Q |
684 |
atttggtttccaaaaagataagaaaacacattttgattcaaaatattattttaagttcgatttggttcggttcgcaaacaataaaacgattaaccgaacc |
783 |
Q |
| |
|
|||||||| ||||| |||||||||| |||||||| ||||||||||||||||| |||| ||||||||| ||| | |||| |||||| ||||||||||| |
|
|
| T |
20792680 |
atttggttctcaaaaggataagaaaatacattttggttcaaaatattattttaggttcagtttggttcgattcatagacaacaaaacggttaaccgaacc |
20792779 |
T |
 |
| Q |
784 |
ataa |
787 |
Q |
| |
|
|||| |
|
|
| T |
20792780 |
ataa |
20792783 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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