View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2906_high_14 (Length: 350)
Name: NF2906_high_14
Description: NF2906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2906_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 25 - 334
Target Start/End: Complemental strand, 46111840 - 46111531
Alignment:
| Q |
25 |
cactcactatgcggttgtgattgctatcagaaataaaaagcctattattgaggacatcaatagctagctttccaggaaacttcaatggtgatgtcaatag |
124 |
Q |
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| T |
46111840 |
cactcactatgcggttgtgattgctatcagaaataaaaagcctattattgaggacatcaatagctagctttccaggaaacttcaatggtgatgtcaatag |
46111741 |
T |
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| Q |
125 |
gcggggatcattatctttctctaaatttaatagaatcggtgtattgtccagcatgttctgttttccataaaattgaagtgccgccgccacgaaatcatca |
224 |
Q |
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| T |
46111740 |
gcggggatcattatctttctctaaatttaatagaatcggtgtattgtccagcatgttctgttttccataaaattgaagtgccgccgccacgaaatcatca |
46111641 |
T |
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| Q |
225 |
agatccttataaaaacaggaacagaaaaagtcttgttttaaatttaatcaccacactaatttatggctacaatgaatatggcataattgggcatcattta |
324 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46111640 |
agatccttataaaaacaggaacagaaaaagtcttgttttaaatttaatcaccacactaatttatggctacaatgaatatggcataattgggcatcattta |
46111541 |
T |
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| Q |
325 |
tggttacata |
334 |
Q |
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|||||||||| |
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| T |
46111540 |
tggttacata |
46111531 |
T |
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