View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2906_high_27 (Length: 239)
Name: NF2906_high_27
Description: NF2906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2906_high_27 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 39360764 - 39360543
Alignment:
| Q |
1 |
cattctcattggaaccaccattgaactccatcacagaaaaaccaacttctgaaactgaaccagacccaaataaagaattctcatcaccaccagaaccagt |
100 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39360764 |
cattctgattggaaccaccattgaactccatcacagaaaaaccaacctctgaaactgaaccagacccaaataaagaattctcatcaccaccagaaccagt |
39360665 |
T |
|
| Q |
101 |
attgatagcatgaattgtgtcagtttggttcagatcataaccaaattccaagttcagattcttctgatagttttgttgatgatatagaggaagcttctgt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
39360664 |
attgatagcatgaattgtgtcagtttggttcagatcataaccaaattccaagttcagattcttctgatagtgttgttgatgatatagaggaagcttctgt |
39360565 |
T |
|
| Q |
201 |
ggtcgaatcggtggaggattat |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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|
| T |
39360564 |
ggtcgaatcggtggaggattat |
39360543 |
T |
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