View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2906_low_23 (Length: 251)
Name: NF2906_low_23
Description: NF2906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2906_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 39237784 - 39238024
Alignment:
| Q |
1 |
caaacaaatatagaaatcgctaaacgtttcgccttctggtgttttccttattatccacatgattattggtcttacaacaaaaacattaaaagcaacaaat |
100 |
Q |
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| T |
39237784 |
caaacaaatatagaaatcgctaaacgtttcgccttctggtgttttccttattatccacatgattattggtcttacaacaaaaacattaaaagcaacaaat |
39237883 |
T |
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| Q |
101 |
gctgcacttgacaacacaaccattatagaagccaaagtaactctttcattctctgccatagcaattgctatggccaaaagtacccatgacaaaacatcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39237884 |
gctgcacttgacaacacaaccattatagaagccaaagtaactctttcattctctgccatagcaattgctatggccaaaagtacccatgacaaaacatcat |
39237983 |
T |
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| Q |
201 |
taatgagtgcagatgaaagagcaaccctgcccaactctgtg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
39237984 |
taatgagtgcagatgaaagagcaaccctgcccaactctgtg |
39238024 |
T |
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