View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2906_low_4 (Length: 494)

Name: NF2906_low_4
Description: NF2906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2906_low_4
NF2906_low_4
[»] scaffold0384 (1 HSPs)
scaffold0384 (208-470)||(1950-2212)
[»] chr8 (50 HSPs)
chr8 (208-470)||(19990429-19990691)
chr8 (184-470)||(15756555-15756841)
chr8 (14-122)||(30335637-30335745)
chr8 (14-117)||(10007758-10007861)
chr8 (14-117)||(10006347-10006450)
chr8 (14-115)||(1824073-1824174)
chr8 (14-115)||(1858518-1858619)
chr8 (17-117)||(18979118-18979218)
chr8 (24-124)||(29968342-29968441)
chr8 (14-117)||(5513985-5514087)
chr8 (25-124)||(12351917-12352016)
chr8 (14-117)||(22220391-22220494)
chr8 (16-122)||(1823550-1823656)
chr8 (16-122)||(1857995-1858101)
chr8 (24-122)||(12353366-12353462)
chr8 (14-122)||(22221359-22221467)
chr8 (14-122)||(22227701-22227809)
chr8 (17-111)||(18978029-18978122)
chr8 (32-122)||(40471160-40471249)
chr8 (32-121)||(8389702-8389791)
chr8 (28-117)||(11287779-11287868)
chr8 (14-122)||(32207320-32207426)
chr8 (17-121)||(11282007-11282111)
chr8 (14-102)||(24123893-24123981)
chr8 (26-117)||(24122886-24122976)
chr8 (14-117)||(30336496-30336599)
chr8 (14-124)||(43661818-43661928)
chr8 (18-122)||(8388462-8388564)
chr8 (44-111)||(18970920-18970986)
chr8 (14-117)||(43661268-43661371)
chr8 (44-115)||(45114541-45114612)
chr8 (14-117)||(29043401-29043504)
chr8 (17-117)||(11283207-11283307)
chr8 (14-122)||(30570251-30570358)
chr8 (24-103)||(24488685-24488763)
chr8 (70-117)||(36249555-36249602)
chr8 (35-122)||(38980060-38980147)
chr8 (35-122)||(39011157-39011244)
chr8 (17-116)||(45112875-45112972)
chr8 (63-117)||(24483146-24483200)
chr8 (35-117)||(38974798-38974880)
chr8 (35-117)||(39005896-39005978)
chr8 (16-117)||(32968459-32968560)
chr8 (20-117)||(42982658-42982755)
chr8 (14-109)||(2379919-2380010)
chr8 (14-117)||(5514266-5514367)
chr8 (14-61)||(24359866-24359913)
chr8 (64-117)||(11456641-11456694)
chr8 (16-117)||(32973933-32974034)
chr8 (73-117)||(11288914-11288958)
[»] chr2 (41 HSPs)
chr2 (24-117)||(38840498-38840591)
chr2 (24-117)||(7899887-7899980)
chr2 (17-117)||(36449781-36449881)
chr2 (14-117)||(18904370-18904473)
chr2 (14-117)||(23869530-23869632)
chr2 (14-117)||(18905983-18906085)
chr2 (14-124)||(22587949-22588058)
chr2 (17-123)||(22848188-22848294)
chr2 (24-121)||(7898690-7898787)
chr2 (17-121)||(36450919-36451022)
chr2 (24-122)||(11258816-11258914)
chr2 (14-117)||(18299376-18299479)
chr2 (24-117)||(38839245-38839338)
chr2 (14-117)||(13030295-13030395)
chr2 (34-117)||(41879227-41879310)
chr2 (25-117)||(1034475-1034567)
chr2 (24-117)||(41878095-41878190)
chr2 (17-117)||(11938787-11938886)
chr2 (14-117)||(18797249-18797353)
chr2 (44-122)||(13567970-13568048)
chr2 (14-96)||(28617946-28618027)
chr2 (44-117)||(18868927-18869000)
chr2 (14-117)||(18300720-18300820)
chr2 (44-122)||(802616-802693)
chr2 (14-96)||(24475248-24475330)
chr2 (27-122)||(13570565-13570660)
chr2 (37-96)||(32739647-32739706)
chr2 (24-122)||(11257620-11257717)
chr2 (16-117)||(26544152-26544252)
chr2 (17-132)||(8535654-8535767)
chr2 (17-117)||(16446157-16446257)
chr2 (44-114)||(24476869-24476937)
chr2 (44-90)||(810806-810852)
chr2 (17-107)||(1093144-1093234)
chr2 (14-96)||(22587525-22587606)
chr2 (24-117)||(1033214-1033305)
chr2 (20-96)||(18869164-18869241)
chr2 (62-122)||(21837298-21837356)
chr2 (14-117)||(26545516-26545619)
chr2 (223-338)||(28016623-28016738)
chr2 (47-131)||(5819741-5819824)
[»] chr5 (39 HSPs)
chr5 (17-121)||(20216761-20216865)
chr5 (14-126)||(25523063-25523175)
chr5 (14-117)||(16650850-16650953)
chr5 (14-122)||(19752910-19753017)
chr5 (17-117)||(28538679-28538779)
chr5 (14-117)||(18486897-18487000)
chr5 (14-117)||(22940618-22940720)
chr5 (14-122)||(24332911-24333019)
chr5 (17-117)||(20214199-20214298)
chr5 (21-117)||(33160288-33160384)
chr5 (17-124)||(36486486-36486593)
chr5 (14-107)||(19754125-19754217)
chr5 (17-122)||(28539818-28539922)
chr5 (17-117)||(1796057-1796157)
chr5 (20-103)||(7311607-7311690)
chr5 (45-117)||(5730444-5730517)
chr5 (24-117)||(5778841-5778934)
chr5 (32-117)||(40255685-40255770)
chr5 (25-117)||(25056387-25056479)
chr5 (14-118)||(42195136-42195238)
chr5 (14-117)||(25055415-25055518)
chr5 (44-123)||(33158095-33158174)
chr5 (14-117)||(42196195-42196298)
chr5 (16-112)||(1015492-1015588)
chr5 (24-117)||(5777904-5777995)
chr5 (46-96)||(34893689-34893739)
chr5 (44-117)||(18154497-18154569)
chr5 (33-117)||(25524141-25524226)
chr5 (17-117)||(36485303-36485403)
chr5 (44-122)||(18485136-18485214)
chr5 (14-79)||(25524093-25524158)
chr5 (27-120)||(38834087-38834179)
chr5 (17-88)||(1797295-1797366)
chr5 (25-117)||(2186774-2186865)
chr5 (34-90)||(5962587-5962643)
chr5 (44-90)||(2685774-2685820)
chr5 (25-121)||(2686407-2686505)
chr5 (14-68)||(16650044-16650098)
chr5 (17-122)||(21835039-21835143)
[»] chr4 (51 HSPs)
chr4 (17-117)||(1963199-1963299)
chr4 (14-117)||(1290193-1290296)
chr4 (14-118)||(12129625-12129729)
chr4 (26-129)||(8758844-8758947)
chr4 (24-117)||(19750580-19750672)
chr4 (24-117)||(19789134-19789226)
chr4 (24-117)||(10471393-10471486)
chr4 (14-119)||(8155739-8155843)
chr4 (17-115)||(31599794-31599892)
chr4 (35-117)||(49308044-49308124)
chr4 (24-117)||(17388216-17388308)
chr4 (25-118)||(35935539-35935632)
chr4 (14-117)||(10447009-10447113)
chr4 (17-117)||(17382996-17383095)
chr4 (17-117)||(31600983-31601083)
chr4 (14-117)||(1835097-1835200)
chr4 (24-117)||(25685827-25685920)
chr4 (14-117)||(1834122-1834226)
chr4 (24-124)||(10470542-10470642)
chr4 (21-117)||(26421624-26421719)
chr4 (24-117)||(25684937-25685030)
chr4 (24-117)||(48780251-48780344)
chr4 (24-117)||(52491612-52491705)
chr4 (14-122)||(21539066-21539174)
chr4 (18-117)||(1964440-1964539)
chr4 (24-117)||(5526131-5526223)
chr4 (24-117)||(8757678-8757770)
chr4 (14-121)||(1289096-1289203)
chr4 (6-117)||(13509346-13509456)
chr4 (24-122)||(5525358-5525455)
chr4 (25-117)||(13386017-13386111)
chr4 (24-122)||(48781051-48781148)
chr4 (17-121)||(55603530-55603632)
chr4 (14-117)||(10448255-10448358)
chr4 (32-122)||(13386545-13386636)
chr4 (16-122)||(3928855-3928961)
chr4 (24-122)||(14868888-14868984)
chr4 (24-122)||(14876950-14877046)
chr4 (24-117)||(35934347-35934438)
chr4 (14-117)||(50909667-50909771)
chr4 (17-99)||(46638723-46638805)
chr4 (17-106)||(21178010-21178099)
chr4 (44-121)||(37728590-37728666)
chr4 (44-117)||(49306778-49306850)
chr4 (19-123)||(27257960-27258063)
chr4 (16-123)||(3927663-3927770)
chr4 (25-88)||(33310095-33310158)
chr4 (36-118)||(55602378-55602459)
chr4 (27-124)||(37727693-37727789)
chr4 (42-90)||(26420345-26420392)
chr4 (44-88)||(46637713-46637757)
[»] chr3 (55 HSPs)
chr3 (17-122)||(54540788-54540893)
chr3 (25-121)||(7267643-7267738)
chr3 (14-117)||(7758405-7758508)
chr3 (16-117)||(22776809-22776910)
chr3 (17-117)||(29931229-29931329)
chr3 (17-117)||(29980383-29980483)
chr3 (14-117)||(534502-534605)
chr3 (17-124)||(29932697-29932803)
chr3 (17-124)||(29981851-29981957)
chr3 (17-124)||(55191993-55192099)
chr3 (17-123)||(54539752-54539858)
chr3 (16-117)||(46719944-46720045)
chr3 (24-121)||(47610585-47610682)
chr3 (17-117)||(51037539-51037638)
chr3 (14-117)||(19984852-19984955)
chr3 (14-117)||(47614188-47614291)
chr3 (27-121)||(7268835-7268928)
chr3 (26-116)||(24516464-24516554)
chr3 (25-117)||(12700178-12700268)
chr3 (24-117)||(47609700-47609793)
chr3 (24-117)||(51469975-51470068)
chr3 (25-117)||(8456481-8456572)
chr3 (14-122)||(12703495-12703602)
chr3 (14-90)||(31645003-31645079)
chr3 (14-120)||(23770402-23770508)
chr3 (16-122)||(46721217-46721323)
chr3 (24-117)||(5029688-5029780)
chr3 (24-117)||(52840609-52840702)
chr3 (14-101)||(34019140-34019227)
chr3 (62-117)||(47615591-47615646)
chr3 (14-117)||(19986065-19986170)
chr3 (16-117)||(8875909-8876010)
chr3 (29-117)||(51038800-51038888)
chr3 (17-117)||(53614822-53614921)
chr3 (17-117)||(53616014-53616114)
chr3 (14-117)||(49216250-49216353)
chr3 (24-117)||(53901393-53901484)
chr3 (24-117)||(535787-535880)
chr3 (45-117)||(5001203-5001275)
chr3 (14-122)||(52104479-52104583)
chr3 (26-117)||(40426785-40426877)
chr3 (14-124)||(54987002-54987110)
chr3 (14-115)||(23769862-23769962)
chr3 (43-111)||(6170281-6170349)
chr3 (49-117)||(11671371-11671438)
chr3 (17-121)||(51347267-51347371)
chr3 (45-117)||(51470481-51470552)
chr3 (418-477)||(8835612-8835671)
chr3 (35-117)||(28262196-28262277)
chr3 (35-117)||(28263127-28263209)
chr3 (35-117)||(52276307-52276389)
chr3 (35-117)||(52281563-52281645)
chr3 (43-96)||(6249633-6249686)
chr3 (35-122)||(18442628-18442716)
chr3 (35-122)||(19487702-19487790)
[»] chr7 (33 HSPs)
chr7 (17-124)||(11662549-11662656)
chr7 (14-117)||(18371427-18371530)
chr7 (14-121)||(42886281-42886388)
chr7 (32-117)||(22630465-22630550)
chr7 (24-117)||(31659625-31659719)
chr7 (24-117)||(17781664-17781757)
chr7 (14-107)||(18372452-18372544)
chr7 (17-117)||(127340-127438)
chr7 (14-117)||(22629486-22629592)
chr7 (14-117)||(7501847-7501950)
chr7 (24-117)||(3227599-3227692)
chr7 (19-117)||(11658382-11658480)
chr7 (24-117)||(17782558-17782651)
chr7 (14-122)||(7500453-7500560)
chr7 (48-122)||(20163585-20163659)
chr7 (14-115)||(14999150-14999249)
chr7 (24-117)||(31949325-31949418)
chr7 (17-117)||(48934901-48935001)
chr7 (32-122)||(128614-128704)
chr7 (24-117)||(31949807-31949900)
chr7 (24-117)||(47525372-47525465)
chr7 (14-117)||(21505419-21505520)
chr7 (14-122)||(47369779-47369887)
chr7 (14-117)||(769416-769519)
chr7 (46-113)||(47524532-47524599)
chr7 (24-117)||(3227111-3227203)
chr7 (17-117)||(30439356-30439455)
chr7 (46-117)||(34174010-34174080)
chr7 (25-90)||(34351522-34351587)
chr7 (34-122)||(31661024-31661112)
chr7 (70-122)||(5111440-5111492)
chr7 (32-124)||(34352799-34352891)
chr7 (14-122)||(43900484-43900590)
[»] chr1 (45 HSPs)
chr1 (24-123)||(24426080-24426179)
chr1 (24-117)||(24422803-24422896)
chr1 (14-117)||(51684369-51684472)
chr1 (14-124)||(37526873-37526982)
chr1 (14-122)||(11436040-11436148)
chr1 (14-117)||(39222468-39222572)
chr1 (14-117)||(11437194-11437297)
chr1 (25-123)||(52274965-52275063)
chr1 (16-117)||(23980463-23980564)
chr1 (14-122)||(36612851-36612958)
chr1 (14-122)||(39153111-39153219)
chr1 (14-121)||(45149965-45150072)
chr1 (14-121)||(43058785-43058891)
chr1 (14-117)||(45148584-45148686)
chr1 (14-121)||(50680331-50680437)
chr1 (24-122)||(52827345-52827443)
chr1 (24-117)||(39699772-39699864)
chr1 (24-121)||(52828075-52828172)
chr1 (17-117)||(35067000-35067100)
chr1 (14-117)||(51685760-51685863)
chr1 (25-117)||(36613910-36614002)
chr1 (14-122)||(44404440-44404548)
chr1 (44-117)||(14999288-14999360)
chr1 (44-121)||(39151930-39152007)
chr1 (24-121)||(52276168-52276265)
chr1 (14-122)||(35594215-35594321)
chr1 (14-122)||(45157204-45157311)
chr1 (44-122)||(39698561-39698639)
chr1 (47-117)||(50681632-50681702)
chr1 (17-122)||(33088615-33088720)
chr1 (24-117)||(41364832-41364924)
chr1 (11-115)||(46066530-46066631)
chr1 (14-122)||(43378708-43378815)
chr1 (14-117)||(43060001-43060104)
chr1 (24-122)||(41366136-41366233)
chr1 (44-117)||(7674531-7674602)
chr1 (14-106)||(7675454-7675546)
chr1 (32-118)||(45156051-45156137)
chr1 (32-121)||(7983049-7983137)
chr1 (44-117)||(11190388-11190461)
chr1 (14-90)||(25652744-25652820)
chr1 (14-117)||(35595187-35595291)
chr1 (17-85)||(44411964-44412032)
chr1 (47-122)||(14999983-15000058)
chr1 (74-122)||(39221356-39221405)
[»] scaffold0302 (2 HSPs)
scaffold0302 (17-117)||(17473-17573)
scaffold0302 (24-117)||(18781-18874)
[»] scaffold0019 (2 HSPs)
scaffold0019 (14-117)||(61454-61557)
scaffold0019 (14-117)||(60093-60196)
[»] chr6 (31 HSPs)
chr6 (14-120)||(1829598-1829704)
chr6 (14-117)||(7316289-7316392)
chr6 (44-117)||(16704522-16704595)
chr6 (14-117)||(7314883-7314985)
chr6 (18-117)||(27322067-27322165)
chr6 (24-117)||(8659268-8659361)
chr6 (17-117)||(10784595-10784696)
chr6 (17-117)||(8822791-8822891)
chr6 (26-117)||(8821876-8821967)
chr6 (27-114)||(14822366-14822453)
chr6 (17-122)||(29473075-29473180)
chr6 (26-122)||(8660211-8660306)
chr6 (34-117)||(16703573-16703653)
chr6 (17-117)||(27437831-27437931)
chr6 (42-117)||(6842306-6842381)
chr6 (27-117)||(14823583-14823674)
chr6 (24-122)||(3721610-3721708)
chr6 (17-119)||(5658757-5658859)
chr6 (17-107)||(10785911-10786000)
chr6 (24-121)||(34834584-34834681)
chr6 (45-117)||(3722533-3722605)
chr6 (32-96)||(26575067-26575131)
chr6 (17-122)||(3333024-3333129)
chr6 (19-86)||(12350832-12350898)
chr6 (18-117)||(27318318-27318418)
chr6 (72-117)||(26717137-26717182)
chr6 (223-338)||(6341594-6341709)
chr6 (14-115)||(6840199-6840298)
chr6 (17-117)||(30495695-30495794)
chr6 (37-101)||(17496816-17496880)
chr6 (49-117)||(26574622-26574690)
[»] scaffold2034 (2 HSPs)
scaffold2034 (16-117)||(236-337)
scaffold2034 (16-99)||(975-1058)
[»] scaffold0320 (1 HSPs)
scaffold0320 (14-117)||(19491-19594)
[»] scaffold0294 (2 HSPs)
scaffold0294 (24-117)||(5443-5536)
scaffold0294 (24-117)||(4445-4538)
[»] scaffold1303 (1 HSPs)
scaffold1303 (14-117)||(1442-1545)
[»] scaffold0586 (2 HSPs)
scaffold0586 (14-121)||(6342-6449)
scaffold0586 (24-117)||(9032-9123)
[»] scaffold0632 (1 HSPs)
scaffold0632 (17-117)||(3306-3405)
[»] scaffold0003 (1 HSPs)
scaffold0003 (17-117)||(49431-49531)
[»] scaffold0093 (2 HSPs)
scaffold0093 (26-117)||(2472-2562)
scaffold0093 (26-117)||(7095-7185)
[»] scaffold0045 (1 HSPs)
scaffold0045 (44-117)||(49109-49182)
[»] scaffold0059 (2 HSPs)
scaffold0059 (25-96)||(3699-3770)
scaffold0059 (44-117)||(4755-4827)
[»] scaffold0112 (1 HSPs)
scaffold0112 (24-88)||(37179-37243)
[»] scaffold0186 (2 HSPs)
scaffold0186 (47-117)||(23084-23152)
scaffold0186 (63-117)||(23934-23988)
[»] scaffold0227 (1 HSPs)
scaffold0227 (35-117)||(135-217)
[»] scaffold0321 (2 HSPs)
scaffold0321 (28-117)||(18731-18820)
scaffold0321 (17-121)||(19407-19513)
[»] scaffold0049 (1 HSPs)
scaffold0049 (17-122)||(7413-7518)


Alignment Details
Target: scaffold0384 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 208 - 470
Target Start/End: Original strand, 1950 - 2212
Alignment:
Q  208 cattcattttacaaaattaagcctattcatgttgctttacctaatggtacatctgtcttagtttattatgctggtactgttagtttttcccctagttttc 307  Q
    ||||| |||||||||||||||| | ||| |||| ||||||| ||||| |||||||| |||||| || ||||||| |||| ||| ||||| || | |||||    
T  1950 cattccttttacaaaattaagcatgttcctgttactttaccaaatggcacatctgttttagttcatcatgctggaactgatagcttttcacccaattttc 2049  T
Q  308 atatcactaatgttttatattcacctcattttcaagtcaatctcatttctgtatctaaactatgcaagcttatgacatacaatatcaattttgtgaatga 407  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||| | ||||| || ||||| |||||  ||||||||||||||||    
T  2050 atatcactaatgtcttatactcgcctcattttcaagtcaatctcatttctgtttctaaaatttgcaaactcatgacttacaagttcaattttgtgaatga 2149  T
Q  408 tcaatgcaccatacaggatgtgaaatcacaaaataagattggtgtaggtgatctttgtgatgg 470  Q
    |||||| | ||||||||||||||||||||| || | ||||||| | |||||||| | ||||||    
T  2150 tcaatgtatcatacaggatgtgaaatcacagaagatgattggtttgggtgatctatatgatgg 2212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 1e-60; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 208 - 470
Target Start/End: Original strand, 19990429 - 19990691
Alignment:
Q  208 cattcattttacaaaattaagcctattcatgttgctttacctaatggtacatctgtcttagtttattatgctggtactgttagtttttcccctagttttc 307  Q
    ||||| |||||||||||||||| | ||| |||| ||||||||||||| |||||||| |||||| || ||||||| |||||||| || || || | |||||    
T  19990429 cattccttttacaaaattaagcatgttcctgttactttacctaatggcacatctgttttagttcatcatgctggaactgttagcttgtcacccaattttc 19990528  T
Q  308 atatcactaatgttttatattcacctcattttcaagtcaatctcatttctgtatctaaactatgcaagcttatgacatacaatatcaattttgtgaatga 407  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||| ||||||| |||||| | ||||| || ||||| |||||  ||||||| ||||||||    
T  19990529 atatcactaatgtcttatactcacctcgttttcaagtcaatctcctttctgtttctaaaatttgcaaactcatgacttacaagttcaatttggtgaatga 19990628  T
Q  408 tcaatgcaccatacaggatgtgaaatcacaaaataagattggtgtaggtgatctttgtgatgg 470  Q
    |||||| | |||||||||||||||||||||||| | ||||||| | |||||||| | ||||||    
T  19990629 tcaatgtatcatacaggatgtgaaatcacaaaagatgattggtttgggtgatctctatgatgg 19990691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 184 - 470
Target Start/End: Original strand, 15756555 - 15756841
Alignment:
Q  184 atttgttcttctatgacattactccattcattttacaaaattaagcctattcatgttgctttacctaatggtacatctgtcttagtttattatgctggta 283  Q
    ||||| |||||| || | ||||| |||||||| || | |||||| ||| |||||||  ||||||||||||| |||||||| |||||  ||||||||||||    
T  15756555 atttgctcttctttgtctttacttcattcattctatataattaaacctcttcatgtcactttacctaatggcacatctgttttagtacattatgctggta 15756654  T
Q  284 ctgttagtttttcccctagttttcatatcactaatgttttatattcacctcattttcaagtcaatctcatttctgtatctaaactatgcaagcttatgac 383  Q
    ||||    ||||| |||  |||||||||||| |||||  |||||||||| |||||||| |||||||| |||| ||| || ||| | || || || |||||    
T  15756655 ctgtgtcattttcacctcattttcatatcaccaatgtactatattcaccacattttcatgtcaatcttatttatgtttccaaattgtgtaaactcatgac 15756754  T
Q  384 atacaatatcaattttgtgaatgatcaatgcaccatacaggatgtgaaatcacaaaataagattggtgtaggtgatctttgtgatgg 470  Q
     ||| || |  |||||||| ||||| |||||||||||||||||||||||| ||| || | ||||||| | |||||||| ||||||||    
T  15756755 ttaccatttacattttgtggatgataaatgcaccatacaggatgtgaaataacagaagatgattggtttgggtgatctctgtgatgg 15756841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 30335745 - 30335637
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| |||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||| | ||||||||| |||||| |||||    
T  30335745 agatgcaaaggggctaaatcttagggggttaaaattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcac 30335646  T
Q  114 tttaacctt 122  Q
    |||| ||||    
T  30335645 tttagcctt 30335637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 10007758 - 10007861
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||||||| | |||||||| |||| | ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  10007758 agatgcaaaggggctaaatcttaggggaccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcac 10007857  T
Q  114 ttta 117  Q
    ||||    
T  10007858 ttta 10007861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 10006450 - 10006347
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||||||||| |||||||| |||||  ||||||||| ||||||||||||||||||||| |||||  |||||||||||||||    
T  10006450 agatgcaaaggggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 10006351  T
Q  114 ttta 117  Q
    ||||    
T  10006350 ttta 10006347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 1824073 - 1824174
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    |||||||||  |||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||| |||||  ||||||||| |||||    
T  1824073 agatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcac 1824172  T
Q  114 tt 115  Q
    ||    
T  1824173 tt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 1858518 - 1858619
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    |||||||||  |||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||| |||||  ||||||||| |||||    
T  1858518 agatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcac 1858617  T
Q  114 tt 115  Q
    ||    
T  1858618 tt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 18979118 - 18979218
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||||||||||| || || ||||| ||||||||||||||| || |||||| |||||||||||||||| |||| ||||| |||||||||||||||||||    
T  18979118 tgcaaatgggctaaatcataaggggccaaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcacttt 18979217  T
Q  117 a 117  Q
    |    
T  18979218 a 18979218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 29968342 - 29968441
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctta 123  Q
    ||||||| ||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||| | |||||| ||||||||||||||||||||| |||    
T  29968342 gggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaa-gggggaaaagtgcactttaacttta 29968440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 5514087 - 5513985
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| | ||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||| |||| |||||| ||||||||||    
T  5514087 agatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaagtt-agggggtaaaagtgcac 5513989  T
Q  114 ttta 117  Q
    ||||    
T  5513988 ttta 5513985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 12352016 - 12351917
Alignment:
Q  25 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 124  Q
    |||||| ||||||||||  ||||||||||||||||||||||||| | ||||||||||| ||||||| |||||||||||| ||| ||||||||| ||||||    
T  12352016 ggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagccttaa 12351917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 22220494 - 22220391
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||| | ||||||||||||| ||| | |||||  |||||||||||||||    
T  22220494 agatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcac 22220395  T
Q  114 ttta 117  Q
    ||||    
T  22220394 ttta 22220391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 1823656 - 1823550
Alignment:
Q  16 atgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    ||||||||||||||| ||||||||| |  |||||||||||||||||||||| | | ||||||||||||||||| | ||||||||||| |||||| |||||    
T  1823656 atgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactt 1823557  T
Q  116 taacctt 122  Q
    || ||||    
T  1823556 tagcctt 1823550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 1858101 - 1857995
Alignment:
Q  16 atgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    ||||||||||||||| ||||||||| |  |||||||||||||||||||||| | | ||||||||||||||||| | ||||||||||| |||||| |||||    
T  1858101 atgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactt 1858002  T
Q  116 taacctt 122  Q
    || ||||    
T  1858001 tagcctt 1857995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 12353366 - 12353462
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||| ||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  12353366 gggctaaatcttagggggccaaaattatagtttt-gtacttagggggccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcactttagcctt 12353462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 22221359 - 22221467
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||| ||| ||||||| ||||||||||  ||||||||||||||  ||||||||| | ||||||||||||||||||| ||||| ||| ||||||||||||    
T  22221359 agatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcac 22221458  T
Q  114 tttaacctt 122  Q
    |||| ||||    
T  22221459 tttagcctt 22221467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 22227701 - 22227809
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||| ||| ||||||| ||||||||||  ||||||||||||||  ||||||||| | ||||||||||||||||||| ||||| ||| ||||||||||||    
T  22227701 agatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcac 22227800  T
Q  114 tttaacctt 122  Q
    |||| ||||    
T  22227801 tttagcctt 22227809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 18978122 - 18978029
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgc 111  Q
    |||||| ||||||| ||||| ||||| ||||||||||||||||||||||||| |||||||||| ||| |||||| |||| |||||||||||||||    
T  18978122 tgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 40471160 - 40471249
Alignment:
Q  32 tcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||| |||||||||||||||||||||||| ||| ||| ||||||||| |||||||| | |||||| ||||||||||||||||||||||||    
T  40471160 tcttaaggggctaaaattgtagtttttgtatttatgga-ccaaaattgtaagttttttaaagttaaagggggaaaagtgcactttaacctt 40471249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 8389702 - 8389791
Alignment:
Q  32 tcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 121  Q
    ||||||||| ||||||||||||||||||||| || ||  |||||||||||| ||||||| | ||||| ||||||||||||||||||||||    
T  8389702 tcttaggggactaaaattgtagtttttgtacataagggaccaaaattgcaactttttgaaacttaagaggggaaaagtgcactttaacct 8389791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 11287868 - 11287779
Alignment:
Q  28 taattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||| | ||||| ||| | ||||||||||||||    
T  11287868 taattcttagggggccaaaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 32207320 - 32207426
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    |||||||||  |||||| ||||| | ||| ||||||||||||||||||||||||| | |||||||||||||||||||  ||||  ||||| |||||||||    
T  32207320 agatgcaaagaggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggtta--ggggggaaagtgcac 32207417  T
Q  114 tttaacctt 122  Q
    |||| ||||    
T  32207418 tttagcctt 32207426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 11282111 - 11282007
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||| ||| ||||||||||  ||||||||  ||||||||  ||||| ||||||||||||| ||||| | ||||||||||| |||||||||||||    
T  11282111 tgcaaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcacttt 11282012  T
Q  117 aacct 121  Q
    |||||    
T  11282011 aacct 11282007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 24123893 - 24123981
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggg 102  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||| ||||||| |  ||||||||||||||||||||| ||||| |||||    
T  24123893 agatgcaaaggggctaaatcttaggaggctaaaattgtaattttagtacttaagaggccaaaattgcaagtttttgaaagttacggggg 24123981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 24122976 - 24122886
Alignment:
Q  26 gctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||| ||||||||| |||||||| |||||||||||||||||| | ||||||||||| ||||| | |||| ||||||||||| |||||||||    
T  24122976 gctaaatcttaggggactaaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagtt-aggggggaaaaatgcacttta 24122886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 30336496 - 30336599
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    |||||||||  |||||| |||||| ||| |||||||||||||||||||||||||  || ||||||  |||||||||| ||||| ||||| | ||||||||    
T  30336496 agatgcaaaatggctaaatcttagagggttaaaattgtagtttttgtacttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcac 30336595  T
Q  114 ttta 117  Q
    ||||    
T  30336596 ttta 30336599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 43661818 - 43661928
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    |||||||| ||||| || ||||||||||| |||||| |||||||||||| ||| |    |||||||||| ||||||| ||||||||| ||||||||||||    
T  43661818 agatgcaattgggcgaaatcttagggggccaaaattttagtttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcac 43661917  T
Q  114 tttaaccttaa 124  Q
    || | ||||||    
T  43661918 ttcagccttaa 43661928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 8388564 - 8388462
Alignment:
Q  18 gcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||| ||||||| ||||||||||| |||||| |||||||||||| ||||| || |||||||||| ||||| | |||||  ||||| |||||||||||||    
T  8388564 gcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaactttttaaaagtta--ggggggaaagtgcacttta 8388467  T
Q  118 acctt 122  Q
     ||||    
T  8388466 gcctt 8388462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 18970986 - 18970920
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgc 111  Q
    ||||||||||||||||||||||||| |||||||||| ||| |||||| |||| |||||||||||||||    
T  18970986 aaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18970920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 43661371 - 43661268
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||||||||| |||||| |||||||||||| || ||  ||||||||| || ||||| | | |||||||  |||||||||||    
T  43661371 agatgcaaaggggctaaatcttagggggccaaaattatagtttttgtacataagggaccaaaattgtaacttttttaaaattaagggtagaaaagtgcac 43661272  T
Q  114 ttta 117  Q
    ||||    
T  43661271 ttta 43661268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 45114541 - 45114612
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    ||||||||||||| ||||| ||| || |||||||||||||||||||| ||||| ||| ||||||||||||||    
T  45114541 aaaattgtagtttgtgtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgcactt 45114612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 29043504 - 29043401
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    |||| |||| ||||||| |||||| |||  ||||||||||||||||||| ||||| | |||||| || | |||||||  |||||||| ||||||||| ||    
T  29043504 agatacaaaggggctaaatcttagagggaaaaaattgtagtttttgtacatagggggtcaaaatcgcgactttttgaaggttaagggaggaaaagtgaac 29043405  T
Q  114 ttta 117  Q
    ||||    
T  29043404 ttta 29043401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 11283207 - 11283307
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||||||| | ||||||| | ||||||||  ||||| ||| ||||| || |||||| ||| ||||||| |||||||||||| ||| ||||||||    
T  11283207 tgcaaaggggctaaattttaggggaccaaaattgtcatttttatacatagggggctaaaattacaactttttgaaagttaagggggggaaaatgcacttt 11283306  T
Q  117 a 117  Q
    |    
T  11283307 a 11283307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 30570251 - 30570358
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||||||||| |||||| || ||||||||| || |||  ||||||||||| ||||| | | |||  |||| ||| ||||||    
T  30570251 agatgcaaaagggctaaatcttagggggccaaaattctaatttttgtacataagga-tcaaaattgcaactttttaaaacttagaggggaaaaggtgcac 30570349  T
Q  114 tttaacctt 122  Q
    |||||||||    
T  30570350 tttaacctt 30570358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 24488685 - 24488763
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggggg 103  Q
    ||||||| ||||| ||||| |||||||| |||||  || |||||| ||||||||||||||||||||| ||||| ||||||    
T  24488685 gggctaaatcttacggggc-aaaattgttgttttgatatttagggggccaaaattgcaagtttttgaaagttaggggggg 24488763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 36249602 - 36249555
Alignment:
Q  70 gccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  36249602 gccaaaattgcaactttttgaaacttaaggggggaaaagtgcacttta 36249555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 38980060 - 38980147
Alignment:
Q  35 tagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    |||||||| |||||||| |||||  ||| | ||| |||||||| ||||  |||||| ||||| |||||||||||||||||||| ||||    
T  38980060 tagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcctt 38980147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 39011157 - 39011244
Alignment:
Q  35 tagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    |||||||| |||||||| |||||  ||| | ||| |||||||| ||||  |||||| ||||| |||||||||||||||||||| ||||    
T  39011157 tagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcctt 39011244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 45112972 - 45112875
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||||||||||||||||| | |||||| || ||||||||||||| || | |||||| ||| ||||||| |||| |||| |||||| ||||||||    
T  45112972 tgcaaaggggctaattcttaggggaccaaaattataatttttgtacttagaga-ctaaaattacaaatttttgaaagtt-agggaggaaaaatgcacttt 45112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 24483200 - 24483146
Alignment:
Q  63 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||| ||||||||||||||||||||| | ||| | ||||||||||||||||||    
T  24483200 ttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcacttta 24483146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 38974880 - 38974798
Alignment:
Q  35 tagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||| |||||||| |||||  ||| | ||| |||||||| ||||  |||||| ||||| ||||||||||||||||||||    
T  38974880 tagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttta 38974798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 39005978 - 39005896
Alignment:
Q  35 tagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||| |||||||| |||||  ||| | ||| |||||||| ||||  |||||| ||||| ||||||||||||||||||||    
T  39005978 tagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttta 39005896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 32968560 - 32968459
Alignment:
Q  16 atgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    ||||||| |||||||  | ||| |||| |||||||| |||||  ||| | ||| |||||||| ||||  |||||| ||||| ||||||||||||||||||    
T  32968560 atgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactt 32968461  T
Q  116 ta 117  Q
    ||    
T  32968460 ta 32968459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 42982658 - 42982755
Alignment:
Q  20 aaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||||||||||||  ||||  |||||||||||||||||    |||| ||||||||| ||| ||||| | | |||| || ||||||||||||||||    
T  42982658 aaatgggctaattcttgaggggtcaaaattgtagtttttgtttacagggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcacttta 42982755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 2379919 - 2380010
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagt 109  Q
    ||||||||||| ||||| ||||| ||||| |||||||||| ||| |||| ||||| ||||||||| ||| ||||||| |||||  |||||||||||    
T  2379919 agatgcaaatgagctaaatcttaaggggccaaaattgtag-tttcgtacataggg-gccaaaattacaactttttgaaagtta--gggggaaaagt 2380010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 5514266 - 5514367
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||||||||| | |||| || | |||||||||||||||||| ||||   || |||||||||||||||| | | || |||||  ||||||||||    
T  5514266 agatgcaaatgggctaaattttagaggtc-aaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaatt-aggggataaaagtgcac 5514363  T
Q  114 ttta 117  Q
    ||||    
T  5514364 ttta 5514367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 24359913 - 24359866
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgta 61  Q
    |||||||||| |||||| ||||||||||  ||||||||||||||||||    
T  24359913 agatgcaaataggctaaatcttagggggtcaaaattgtagtttttgta 24359866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 11456694 - 11456641
Alignment:
Q  64 tagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||| ||||||||||||| ||||||| | ||| |||| |||||||||||||||    
T  11456694 tagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcacttta 11456641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 32973933 - 32974034
Alignment:
Q  16 atgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    ||||||| |||||||  | ||| |||| |||||||| |||||  ||| | ||| |||||||| ||||  |||||| ||||| ||||| ||||||||||||    
T  32973933 atgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggaaaaagtgcactt 32974032  T
Q  116 ta 117  Q
    ||    
T  32974033 ta 32974034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 11288914 - 11288958
Alignment:
Q  73 aaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||||||||||||| ||||| ||| | ||||||||||||||    
T  11288914 aaaattgcaagtttttgaaagttaggggtgaaaaagtgcacttta 11288958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 4e-36; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 38840498 - 38840591
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||    
T  38840498 gggctaaatcttagggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 38840591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 7899887 - 7899980
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||    
T  7899887 gggctaaatcttagggggctaaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 7899980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 36449881 - 36449781
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| || ||||||||| |||||  ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  36449881 tgcaaagggcctaattcttgggggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttt 36449782  T
Q  117 a 117  Q
    |    
T  36449781 a 36449781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 18904473 - 18904370
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||| ||| ||||||||||||||||  | |||||||||||||||||||||| || |||||||||||| |||||||| ||||||||||||||||||||||    
T  18904473 agatgtaaaggggctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcac 18904374  T
Q  114 ttta 117  Q
    ||||    
T  18904373 ttta 18904370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 23869530 - 23869632
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| | ||||||||| ||||||||||||    
T  23869530 agatgcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaagttttt-aaagttaagggtggaaaagtgcac 23869628  T
Q  114 ttta 117  Q
    ||||    
T  23869629 ttta 23869632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 18905983 - 18906085
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||| |||||   ||||||||||||||    
T  18905983 agatgcaaatgagctaaatcttagggg-ctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcac 18906081  T
Q  114 ttta 117  Q
    ||||    
T  18906082 ttta 18906085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 22587949 - 22588058
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| | |||||||| |||||    
T  22587949 agatgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacataggg-gccaaaattgcaagtttttgaaagttatgaggggaaaaatgcac 22588047  T
Q  114 tttaaccttaa 124  Q
    |||| ||||||    
T  22588048 tttagccttaa 22588058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 22848294 - 22848188
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||||||| |||||||| || |||||||||||||||||| ||||||  |||||||||||||||||||| ||||| ||||| |||||||||||||    
T  22848294 tgcaaaggggctaaatcttagggagccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcacttt 22848195  T
Q  117 aacctta 123  Q
    | |||||    
T  22848194 agcctta 22848188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 7898787 - 7898690
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 121  Q
    ||||||| ||||||||||| ||||||||||||| | ||||||||  || |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  7898787 gggctaaatcttagggggccaaaattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcactttaacct 7898690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 36450919 - 36451022
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| | |||||||||| ||||||  |||||||||||| |||||||||||  |||||||||||||||||||| |||||| ||||||||||||||||||    
T  36450919 tgcaaaggagctaattcttggggggccgaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcacttt 36451017  T
Q  117 aacct 121  Q
    |||||    
T  36451018 aacct 36451022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 11258816 - 11258914
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta-aggggggaaaagtgcactttaacctt 122  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || |||||||| ||||||||| ||||    
T  11258816 gggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaa-tgcactttagcctt 11258914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 18299479 - 18299376
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| || |||||||| ||||||||||||||| ||||||||  |||||||||| |||||||||| ||||| ||| ||||||||||||    
T  18299479 agatgcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaaagtttttgaaagttacgggtggaaaagtgcac 18299380  T
Q  114 ttta 117  Q
    ||||    
T  18299379 ttta 18299376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 38839338 - 38839245
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||| || |||||||||||||||||| | ||||||||| |||| |||||||||    
T  38839338 gggctaaatcttagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcacttta 38839245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 13030395 - 13030295
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| | ||||| ||||||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||  |||||||||||||||    
T  13030395 agatgcaaaagagctaaatcttagggggcaaaaattgtaatttttgtacttaggg-gccaaaattacaagtttttgaaagtta--gggggaaaagtgcac 13030299  T
Q  114 ttta 117  Q
    ||||    
T  13030298 ttta 13030295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 41879227 - 41879310
Alignment:
Q  34 ttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||| ||||||| ||||||    
T  41879227 ttagggggttaaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtacttta 41879310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 1034475 - 1034567
Alignment:
Q  25 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||| ||||||||||   ||||||| ||||| |||| ||||| |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  1034475 ggctaaatcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcacttta 1034567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 41878190 - 41878095
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca---agtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||| ||||| ||||||||||||| ||||||||||| ||||||||||||   ||||||||| |||||||||||| |||||||||||||    
T  41878190 gggctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaagggggg-aaagtgcacttta 41878095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 11938787 - 11938886
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| | ||||||||||||||||  |||||| || ||||||||||||||   |||||||||||||||||||| ||||| ||| |||||||||||||||    
T  11938787 tgcaaaagagctaattcttaggggggcaaaattata-tttttgtacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttt 11938885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 18797353 - 18797249
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggg-ggaaaagtgca 112  Q
    ||||||||| ||||||| | ||||||||  ||||||||||||||  |||||| || | ||||||||||||||||||| ||||| |||| |||||||||||    
T  18797353 agatgcaaaggggctaaattttagggggtcaaaattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgca 18797254  T
Q  113 cttta 117  Q
    |||||    
T  18797253 cttta 18797249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 13568048 - 13567970
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||| | |||   |||||||||| ||||||||||||    
T  13568048 aaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacactttaacctt 13567970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 28618027 - 28617946
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 96  Q
    ||||||||| ||||||| ||||||||||| ||||||| ||||||||||||| ||| |||||||||||||| |||||| |||||    
T  28618027 agatgcaaaggggctaaatcttagggggc-aaaattgaagtttttgtacttggggggccaaaattgcaagattttgaaagtta 28617946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 18869000 - 18868927
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||| ||||| ||| |||||||| |||||||    
T  18869000 aaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacacttta 18868927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 18300720 - 18300820
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| |  |||||| | ||||||||||||||||||||||||| | ||||||||||||||| ||| |||||  ||||||||||||||     
T  18300720 agatgcaaaggggctaaattataggggtc-aaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagtta--gggggaaaagtgcaa 18300816  T
Q  114 ttta 117  Q
    ||||    
T  18300817 ttta 18300820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 802616 - 802693
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||| | || ||||||||||||| ||||||| ||||    
T  802616 aaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaactt-aggggggaaaagtacactttagcctt 802693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 24475330 - 24475248
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 96  Q
    ||||||||||| ||||| |  |||||||| ||||||||||||||| ||||||||| || |||||| ||||||||||| |||||    
T  24475330 agatgcaaatgagctaaattatagggggccaaaattgtagtttttatacttagggggcaaaaattacaagtttttgaaagtta 24475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 13570565 - 13570660
Alignment:
Q  27 ctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||||| |||| | |||||| ||||||||||||||| ||  | |||||||||||||||||| ||||| |||  ||||| ||||||||| ||||    
T  13570565 ctaattcttgggggaccaaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatgcactttagcctt 13570660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 32739706 - 32739647
Alignment:
Q  37 gggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 96  Q
    |||||| ||||||||||||||||||| || || ||||||||||||||||||||| |||||    
T  32739706 gggggccaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagtta 32739647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 11257717 - 11257620
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||| ||||||| ||| ||||||||||||||| |||||||||    |||||||||||||||||| |||||  || | |||||||||||||| ||||    
T  11257717 gggctaaatcttaggaggccaaaattgtagtttttatacttaggg-tttaaaattgcaagtttttgaaagttagaggagtaaaagtgcactttagcctt 11257620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 26544252 - 26544152
Alignment:
Q  16 atgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    ||||||| | ||||| ||||||| |||||||| ||||||||||||||||| ||| ||||||||| || ||||| | | ||| |||  |||||||||||||    
T  26544252 atgcaaaggtgctaaatcttaggaggctaaaactgtagtttttgtactta-ggaaccaaaattgtaaatttttaaaaattaggggtagaaaagtgcactt 26544154  T
Q  116 ta 117  Q
    ||    
T  26544153 ta 26544152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 8535654 - 8535767
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||||||||||||||||||  ||||||||||||| | ||||||  |   ||||||| ||||||||| | |||||  || ||||||||| |||||    
T  8535654 tgcaaaggggctaattcttagggggtcaaaattgtagtttctctacttaaaggatcaaaattacaagtttttaaaagtta--ggaggaaaagtgtacttt 8535751  T
Q  117 aaccttaacattacta 132  Q
    |||||| | |||||||    
T  8535752 aaccttcaaattacta 8535767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 16446257 - 16446157
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||||||| |||||||| |||    |||||||||||||||||| ||| |  |  |||||||||||||||||| |||||||||  ||||| ||||||||    
T  16446257 tgcaaatgggttaattcttggggtatcaaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcacttt 16446158  T
Q  117 a 117  Q
    |    
T  16446157 a 16446157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 24476869 - 24476937
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcact 114  Q
    |||||||||||||||||||||||||  |||||||| ||||||||| | ||||  ||||| |||||||||||    
T  24476869 aaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt--gggggaaaaagtgcact 24476937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 810806 - 810852
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 90  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||    
T  810806 aaaattgtagtttttgtacacagggggccaaaattgcaagtttttga 810852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 1093144 - 1093234
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaa 107  Q
    |||||| ||||||| |||||| ||| |||||||||| ||||||||  ||||||  || ||||||||  |||| | ||||||||||||||||    
T  1093144 tgcaaaggggctaaatcttagcgggttaaaattgtaatttttgtatatagggaatcacaattgcaacattttaaaagttaaggggggaaaa 1093234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 22587606 - 22587525
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 96  Q
    |||||||||  |||||| ||||||||||| ||||||||||||||||||  |||||  ||||||||| || ||||||| |||||    
T  22587606 agatgcaaagaggctaaatcttagggggccaaaattgtagtttttgta-ataggggaccaaaattggaactttttgaaagtta 22587525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 1033305 - 1033214
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| |||||| ||| | ||||| || |||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||||| |||||||    
T  1033305 gggctaaatcttagaggggttaaattataattttggtatttaggg-gccaaaattgcaagtttttaaaagtt-aggggggaaaagtacacttta 1033214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 18869164 - 18869241
Alignment:
Q  20 aaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattg-caagtttttgatagtta 96  Q
    ||||||||||| |||||||||   |||||||||||||||||||||||   |||||||||| ||| ||||||| |||||    
T  18869164 aaatgggctaaatcttaggggataaaaattgtagtttttgtacttagaaggccaaaattgccaaatttttgaaagtta 18869241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 21837298 - 21837356
Alignment:
Q  62 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||| ||||||||||||||||||||| |||||  |||| |||||||||||||| ||||    
T  21837298 cttagggggccaaaattgcaagtttttgaaagtta--ggggaaaaagtgcactttagcctt 21837356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 26545516 - 26545619
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| |||||| |||  |||||| || |||||||| ||| || | ||||||||||| ||||||| ||| | |  || ||||||||||    
T  26545516 agatgcaaaggggctaaatcttagagggtcaaaattataatttttgtatttaaggggtcaaaattgcaaatttttgaaagtcatgaaggaaaaagtgcac 26545615  T
Q  114 ttta 117  Q
    ||||    
T  26545616 ttta 26545619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 338
Target Start/End: Original strand, 28016623 - 28016738
Alignment:
Q  223 attaagcctattcatgttgctttacctaatggtacatctgtcttagtttattatgctggtactgttagtttttcccctagttttcatatcactaatgttt 322  Q
    ||||| ||||| |||||| |||||||||||||| |  ||||  | ||| | |||||||| |||| |  |||||| |||  ||| ||||| |||||||| |    
T  28016623 attaaacctatgcatgttactttacctaatggttccactgtgattgttcactatgctggcactgctgttttttcaccttttttccatattactaatgtct 28016722  T
Q  323 tatattcacctcattt 338  Q
    ||||||||||||||||    
T  28016723 tatattcacctcattt 28016738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 5819741 - 5819824
Alignment:
Q  47 attgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaacattact 131  Q
    |||||||||||||| | || || |||||||| |||| ||||||| | |||||||||| ||||||| | ||| ||||||| |||||    
T  5819741 attgtagtttttgttcatatggggccaaaatcgcaactttttgaaacttaagggggg-aaagtgcgccttagccttaactttact 5819824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 2e-35; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 20216761 - 20216865
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||  |||||||| |||||||||||||||||| | |||||||||||||||||||||||    
T  20216761 tgcaaatgggctaattcttggggggccaaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttt 20216860  T
Q  117 aacct 121  Q
    |||||    
T  20216861 aacct 20216865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 25523175 - 25523063
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||    
T  25523175 agatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcac 25523076  T
Q  114 tttaaccttaaca 126  Q
    |||| ||| ||||    
T  25523075 tttagcctaaaca 25523063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 16650850 - 16650953
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    |||||||||||||||||  |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| | ||||||||| ||||||||||||    
T  16650850 agatgcaaatgggctaaaccttagggggctaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcac 16650949  T
Q  114 ttta 117  Q
    ||||    
T  16650950 ttta 16650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 19753017 - 19752910
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||  ||||||| || |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  19753017 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcac 19752919  T
Q  114 tttaacctt 122  Q
    |||| ||||    
T  19752918 tttagcctt 19752910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 28538779 - 28538679
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||| || | ||||||||||||||||||| ||||| ||| |||||||||||||||    
T  28538779 tgcaaaggggctaaatcttagggggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcacttt 28538680  T
Q  117 a 117  Q
    |    
T  28538679 a 28538679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 18486897 - 18487000
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||||||||| |||||||| |||| | ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||    
T  18486897 agatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcac 18486996  T
Q  114 ttta 117  Q
    ||||    
T  18486997 ttta 18487000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 22940618 - 22940720
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||| ||| ||||||| | ||||||| | ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  22940618 agatgaaaaggggctaaattttaggggtc-aaaattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcac 22940716  T
Q  114 ttta 117  Q
    ||||    
T  22940717 ttta 22940720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 24333019 - 24332911
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||| ||| |||||| |||  ||||||||||||||||||| || || ||||||||||||||||||||| | ||||||||| ||||||||||    
T  24333019 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcac 24332920  T
Q  114 tttaacctt 122  Q
    |||||||||    
T  24332919 tttaacctt 24332911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 20214298 - 20214199
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||||||| ||||||||  ||||| ||||||||||||||||||| ||| | || |||||||||||||||||| ||||||| |||||||||||||||||    
T  20214298 tgcaaatgggataattcttgaggggccaaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaag-ggggaaaagtgcacttt 20214200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 33160288 - 33160384
Alignment:
Q  21 aatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||||| ||||| ||||  ||||||||||||| | ||||||||| || |||||||||||||||||| | ||||||||||||||||||||||||    
T  33160288 aatgggctaaatcttaaggggtcaaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttta 33160384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 36486486 - 36486593
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| || |||| ||||||||| | ||||||||||||||||||||||||| | ||||||||||||||||| | ||||| ||||| ||||||||||||     
T  36486486 tgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttc 36486585  T
Q  117 aaccttaa 124  Q
    | ||||||    
T  36486586 agccttaa 36486593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 19754125 - 19754217
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaa 107  Q
    ||||||||  ||||||| || |||||||| |||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||||||||    
T  19754125 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaa 19754217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 28539818 - 28539922
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| || |||| ||||||||| | ||||||||||||||||||||||| | | ||||||||||||||||| | |||| ||||||||||| ||||||||    
T  28539818 tgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagtt-aggggggaaaaatgcacttt 28539916  T
Q  117 aacctt 122  Q
    ||||||    
T  28539917 aacctt 28539922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 1796157 - 1796057
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||||||| |||||||| ||||   ||||||||||||||||||||||||  |||||| |||||||||||||| ||||| ||| |||||| ||||||||    
T  1796157 tgcaaatgggttaattcttgggggatcaaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcacttt 1796058  T
Q  117 a 117  Q
    |    
T  1796057 a 1796057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 7311690 - 7311607
Alignment:
Q  20 aaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggggg 103  Q
    |||| |||||| ||||||||||||||||||||||||||||||||| ||  ||||| ||||||||||||||| ||||| ||||||    
T  7311690 aaattggctaaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttaggggggg 7311607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 5730517 - 5730444
Alignment:
Q  45 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagg-ggggaaaagtgcacttta 117  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  5730517 aaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcacttta 5730444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 5778841 - 5778934
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||   ||||||| ||||| |||||||||| || |||||||||||||||||| |||||  |||||||||||||||||||    
T  5778841 gggctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 5778934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 40255685 - 40255770
Alignment:
Q  32 tcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||||||| ||||||||||||| |||| |||||| | ||||||||||||||||| | | ||||| ||||||||||||||||||    
T  40255685 tcttagggggccaaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcacttta 40255770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 25056387 - 25056479
Alignment:
Q  25 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||| ||||||||||  ||||||||||||||  ||||||||| | ||||||||||||||||||| ||||| | | ||||||||||||||||    
T  25056387 ggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcacttta 25056479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 42195238 - 42195136
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||||||| | |||||||||| |||||||| ||||| |||||||| |||| ||||| | ||||||||||| ||||||||||    
T  42195238 agatgcaaaggggctaaatcttaggggaccaaaattgtagattttgtacatagggggccaaaatcgcaactttttaa-agttaaggggg-aaaagtgcac 42195141  T
Q  114 tttaa 118  Q
    |||||    
T  42195140 tttaa 42195136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 25055518 - 25055415
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||| |||||   ||||||||||||   || | |||||  |||||||||||||||    
T  25055518 agatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcac 25055419  T
Q  114 ttta 117  Q
    ||||    
T  25055418 ttta 25055415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 33158174 - 33158095
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctta 123  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||||| ||||  |||| ||||||||| |||||    
T  33158174 aaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcctta 33158095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 42196195 - 42196298
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||||||| ||| | |||||| |  ||| ||||| | ||||| |||||| |||||||||    
T  42196195 agatgcaaatgggctaaatcttaggggactaaaaatgtagtttttgtacatagagggccaaattcacaactttttaaaagttaggggggggaaagtgcac 42196294  T
Q  114 ttta 117  Q
    ||||    
T  42196295 ttta 42196298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 1015588 - 1015492
Alignment:
Q  16 atgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgca 112  Q
    ||||||| || ||||||||||||||| ||||||||||| ||||||||  |||| |||||||||| || ||||| | ||||| ||| |||||||||||    
T  1015588 atgcaaagggactaattcttagggggttaaaattgtaggttttgtacacagggggccaaaattgtaactttttaaaagttaggggaggaaaagtgca 1015492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 5777995 - 5777904
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||   ||||||| ||||| |||||||||| | ||||||||||||||||||| |||||  ||||| |||||||||||||    
T  5777995 gggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta--ggggggaaagtgcacttta 5777904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 34893739 - 34893689
Alignment:
Q  46 aattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 96  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagtta 34893689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 18154569 - 18154497
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||| ||||||||||  |||||| |||||||    
T  18154569 aaaattgtagtttttgtacttaggg-gtcaaaattgtaagtttttgaaagttaaggggaaaaaagttcacttta 18154497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 25524141 - 25524226
Alignment:
Q  33 cttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta-aggggggaaaagtgcacttta 117  Q
    |||||| ||| ||||||||||||||||||||||||| ||||||||| ||| ||||| | | |||  ||||||||||||||||||||    
T  25524141 cttaggaggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcacttta 25524226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 36485403 - 36485303
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||| ||| ||||||||||| |||||| ||||||||||||||| |  | |||||||| |||||||| | ||||| ||| |||||| ||||||||    
T  36485403 tgcaaaggggttaaatcttagggggccaaaattatagtttttgtacttaagaggtcaaaattgtaagttttttaaagttaggggtggaaaaatgcacttt 36485304  T
Q  117 a 117  Q
    |    
T  36485303 a 36485303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 18485214 - 18485136
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    |||||||| |||||  ||||||||| ||||||||||||||||||| | |||||  |||| |||||||||||||| ||||    
T  18485214 aaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttagcctt 18485136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 25524093 - 25524158
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattg 79  Q
    ||||||||| ||||||| ||||||||||  |||||| |||||||||||||||||  ||||||||||    
T  25524093 agatgcaaaggggctaaatcttagggggtcaaaattatagtttttgtacttaggaggccaaaattg 25524158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 38834179 - 38834087
Alignment:
Q  27 ctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacc 120  Q
    |||| |||||||| |||||||||||||||||||||| || || | |||||| |||| ||||| | ||||||||||  |||| ||||||||||||    
T  38834179 ctaaatcttagggagctaaaattgtagtttttgtacataagg-gtcaaaatcgcaactttttaaaagttaaggggaaaaaaatgcactttaacc 38834087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 1797295 - 1797366
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagttttt 88  Q
    |||||| ||||||| ||||| ||| | |||||||||||||||||   || ||||||||||||||||||||||    
T  1797295 tgcaaaggggctaaatcttaagggaccaaaattgtagtttttgtttataaggagccaaaattgcaagttttt 1797366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 2186865 - 2186774
Alignment:
Q  25 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||| |||||||||  |||||||||||||||||||| |||    |||||||||||| ||||||| | || |||||| |||| |||||||||    
T  2186865 ggctaaatcttaggggattaaaattgtagtttttgtacatagaagaccaaaattgcaactttttgaaactt-agggggaaaaaatgcacttta 2186774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 5962587 - 5962643
Alignment:
Q  34 ttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 90  Q
    ||||| |||||||||| ||||||||||||||||||  |||||||| ||| |||||||    
T  5962587 ttaggtggctaaaattatagtttttgtacttaggggaccaaaattacaaatttttga 5962643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 2685820 - 2685774
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 90  Q
    |||||||||||||||||||||||||  ||||||||  ||||||||||    
T  2685820 aaaattgtagtttttgtacttaggggaccaaaattataagtttttga 2685774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 2686407 - 2686505
Alignment:
Q  25 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta-agg-ggggaaaagtgcactttaacct 121  Q
    |||||| || |||||| | |||||| ||||||||||||||| |    ||||||||||||||||| | ||||| ||| |||| |||||||||||||||||    
T  2686407 ggctaaatcataggggaccaaaattatagtttttgtacttaagagatcaaaattgcaagtttttaaaagttagaggagggggaaagtgcactttaacct 2686505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 16650098 - 16650044
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttaggg 68  Q
    ||||||||| ||| ||| |||||| |||  |||||||||||||||||||||||||    
T  16650098 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacttaggg 16650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 21835143 - 21835039
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||| ||| ||||||||||  ||||||||||||||||||| ||||| | ||||||  ||| ||||| | | || || |||| ||||||||||||    
T  21835143 tgcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaatcacaactttttcaaactt-agagggggaaagtgcacttt 21835045  T
Q  117 aacctt 122  Q
    | ||||    
T  21835044 agcctt 21835039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 2e-35; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 1963299 - 1963199
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  1963299 tgcaaaggggctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcacttt 1963200  T
Q  117 a 117  Q
    |    
T  1963199 a 1963199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 1290193 - 1290296
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||| ||||||||||||||||||||||    
T  1290193 agatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcac 1290292  T
Q  114 ttta 117  Q
    ||||    
T  1290293 ttta 1290296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 12129729 - 12129625
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||||||||| ||||| ||||  |||||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||||||||||||    
T  12129729 agatgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcac 12129630  T
Q  114 tttaa 118  Q
    |||||    
T  12129629 tttaa 12129625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 8758844 - 8758947
Alignment:
Q  26 gctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaac 125  Q
    ||||| ||||| ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||     
T  8758844 gctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcattttaaccttaaa 8758943  T
Q  126 atta 129  Q
    ||||    
T  8758944 atta 8758947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 19750580 - 19750672
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||||||||    
T  19750580 gggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 19750672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 19789226 - 19789134
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||||||||    
T  19789226 gggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 19789134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 10471393 - 10471486
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||   ||||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10471393 gggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 10471486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 8155843 - 8155739
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtactta-gggagccaaaattgcaagtttttgatagttaaggggggaaaagtgca 112  Q
    |||||||||  |||||| ||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||||||| |||||  ||||||||||||||    
T  8155843 agatgcaaagcggctaaatcttagggggccaaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagtta--gggggaaaagtgca 8155746  T
Q  113 ctttaac 119  Q
    |||||||    
T  8155745 ctttaac 8155739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 31599892 - 31599794
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    |||||| ||||||| ||||||||| | ||||||||||||||||||||||||| | ||||||||||||||||| | ||||| ||||| ||||||||||||    
T  31599892 tgcaaaggggctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcactt 31599794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 49308044 - 49308124
Alignment:
Q  35 tagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||    
T  49308044 tagggggc-aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 49308124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 17388216 - 17388308
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||||||| |||||| ||||||||||||| |||||||| ||  |||||||||||||||||||| |||| |||||||||||||||||||||    
T  17388216 gggctaattcttggggggccaaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 17388308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 35935539 - 35935632
Alignment:
Q  25 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaa 118  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||| || |||||||||| ||||| | |||||||||||| ||||||||||||||    
T  35935539 ggctaaatcttagggggccaaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcactttaa 35935632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 10447113 - 10447009
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaag-gggggaaaagtgca 112  Q
    ||||||||| ||||||| |||||||||| ||||||||| |||||||||| ||||| || |||||||||| ||||||| | ||||| ||||||||||||||    
T  10447113 agatgcaaaggggctaaatcttaggggggtaaaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgca 10447014  T
Q  113 cttta 117  Q
    |||||    
T  10447013 cttta 10447009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 17383095 - 17382996
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||| |||||||| |||||| |||||||||||||||||||||| ||  |||||||||||||||||||| |||| ||||| ||||||||||||||    
T  17383095 tgcaaaggggataattcttggggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcacttt 17382997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 31600983 - 31601083
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||||||||||| ||||| ||||  ||||||||||||||||||||||||| | ||||||||||||||||| | |||||  |||| |||||||||||||    
T  31600983 tgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcacttt 31601082  T
Q  117 a 117  Q
    |    
T  31601083 a 31601083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 1835097 - 1835200
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||||||||  ||||||||||||||  ||||||||| | ||||||||||||||||||| ||||| ||  ||||||||||||    
T  1835097 agatgcaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcac 1835196  T
Q  114 ttta 117  Q
    ||||    
T  1835197 ttta 1835200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 25685827 - 25685920
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||   ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  25685827 gggctaaatcttagggggtctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 25685920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 1834226 - 1834122
Alignment:
Q  14 agatgcaaatgggctaattcttaggggg-ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgca 112  Q
    ||||||||||||||||| |||||||||| | ||||||||||||||| ||| ||||| | |||||||| |||||||| | |||||  ||||||||||||||    
T  1834226 agatgcaaatgggctaaatcttaggggggccaaaattgtagtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgca 1834127  T
Q  113 cttta 117  Q
    |||||    
T  1834126 cttta 1834122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 10470642 - 10470542
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctta 123  Q
    ||||||| ||||||||||   |||||||  |||| |||||||| | | ||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  10470642 gggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctta 10470543  T
Q  124 a 124  Q
    |    
T  10470542 a 10470542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 26421624 - 26421719
Alignment:
Q  21 aatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||||| ||||| ||||  ||||||||||||||||||||||||  | ||||||||||||||||||| |||| || ||||||||||||||||||    
T  26421624 aatgggctaaatcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagtt-agaggggaaaagtgcacttta 26421719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 25685030 - 25684937
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||   ||||||| ||||| |||||||| | | ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  25685030 gggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 25684937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 48780344 - 48780251
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||   ||||||| ||||| |||||||||| | ||||||||||||||||| | ||||| ||||||||||||||||||||    
T  48780344 gggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcacttta 48780251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 52491612 - 52491705
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| | ||||||||| ||||||||||||| |||| |||| |  |||||||||||||||||||| ||||||||| |||||||| |||||||    
T  52491612 gggctaaattttagggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacacttta 52491705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 21539066 - 21539174
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| | ||||| ||||||||||  |||||||||||||||  |||||||  ||||||||||||||||||| | | ||||||| |||||||||  |    
T  21539066 agatgcaaaggagctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaagtgtgc 21539165  T
Q  114 tttaacctt 122  Q
    |||||||||    
T  21539166 tttaacctt 21539174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 1964440 - 1964539
Alignment:
Q  18 gcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||| ||| ||||||||| ||| | ||||||||||||||||| | ||||| |||||||||| || ||||| | ||||||||| ||||||||||||||||    
T  1964440 gcaaaggggataattcttaagggaccaaaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcacttta 1964539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 5526131 - 5526223
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||   ||||||| |||||  ||||||||| ||||||||||||||||||||| |||| || ||||||||||||||||||    
T  5526131 gggctaaatcttaggggggctaaattgtggttttgttacttagggggccaaaattgcaagtttttgaaagtt-agaggggaaaagtgcacttta 5526223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 8757770 - 8757678
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||| ||| | ||||||||||||| ||||||||||| || ||||||| |||||||||| |||||| |||| ||||||||||||||    
T  8757770 gggctaaatcttaagggtccaaaattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagttaa-ggggaaaaagtgcacttta 8757678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 1289203 - 1289096
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||  ||| ||| ||||| | ||||||||||||||||||| ||||||| |   ||||||| ||| | ||||| |||||||||||||||||| |||    
T  1289203 agatgcaagggggttaaatcttaagaggctaaaattgtagtttttatacttagaggatcaaaattacaaatatttgaaagttaaggggggaaaagttcac 1289104  T
Q  114 tttaacct 121  Q
    ||||||||    
T  1289103 tttaacct 1289096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 13509346 - 13509456
Alignment:
Q  6 aggagcagagatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaa 105  Q
    ||||||| || |||||| ||||||| |||||||||   ||||||||||||||  ||||| ||| ||||||||||||| ||||| | |||| |||||||||    
T  13509346 aggagcaaaggtgcaaaggggctaaatcttaggggatcaaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagtt-aggggggaa 13509444  T
Q  106 aagtgcacttta 117  Q
    |||| |||||||    
T  13509445 aagtacacttta 13509456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 5525455 - 5525358
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||| ||||||||||   ||||||| ||||| |||||||||| | ||||||||||||||||||| |||| ||||||||||| || |||||| ||||    
T  5525455 gggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaaatgtactttagcctt 5525358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 13386111 - 13386017
Alignment:
Q  25 ggctaattcttagggggcta-aaattgtagtttttgtacttagggagccaaaattgcaagt-ttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||| ||||||||||  | ||||||| ||||| |||||||||| ||||||||||||||| |||||| |||||  |||||||||||||||||||    
T  13386111 ggctaaatcttagggggggataaattgtggttttggtacttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcacttta 13386017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 48781051 - 48781148
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||| | ||||||||   ||||||| ||||| ||||||||||| |||||||||||| ||||||| |||||  ||||||||||||||||||| ||||    
T  48781051 gggctaaattttaggggggctaaattgtggttttagtacttaggga-ccaaaattgcaaatttttgaaagttagagggggaaaagtgcactttagcctt 48781148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 55603530 - 55603632
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||||| ||| |||||| |||||| ||||| |||||||||||||  ||||    |||||||||||||||||| |||||| |||| |||||||||||||    
T  55603530 tgcaaatgagcttattctt-gggggccaaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaa-ggggaaaaagtgcacttt 55603627  T
Q  117 aacct 121  Q
    |||||    
T  55603628 aacct 55603632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 10448255 - 10448358
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||  |||||| |||| ||||||||||||||||||| ||||| || ||||| |||| ||||||| | ||| ||| ||  ||||||||    
T  10448255 agatgcaaaggggctatatcttagagggccaaaattgtagtttttgtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcac 10448354  T
Q  114 ttta 117  Q
    ||||    
T  10448355 ttta 10448358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 13386545 - 13386636
Alignment:
Q  32 tcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggggg-aaaagtgcactttaacctt 122  Q
    ||||||||||   ||||||| ||||| ||||||| || | ||||||||||||||||||| ||||| |||||| |||||||||||||| ||||    
T  13386545 tcttaggggggctaaattgtggttttggtacttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactttagcctt 13386636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 3928855 - 3928961
Alignment:
Q  16 atgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    ||||||| |||||||  | ||| |||| |||||||| |||||  ||| ||||| |||||||| ||||  |||||| ||||| ||||||||||||||||||    
T  3928855 atgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactt 3928954  T
Q  116 taacctt 122  Q
    || ||||    
T  3928955 tagcctt 3928961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 14868984 - 14868888
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||||||||||||||  ||| |||| |||||  ||||||| | |||||||||||||| |||||| || || |||||||||||||||||||| ||||    
T  14868984 gggctaattcttagggggggaaa-ttgtggttttgatacttagcgggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcctt 14868888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 14876950 - 14877046
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||||||||||||||  ||| |||| |||||  ||||||| | |||||||||||||| |||||| || | ||||||||||||||||||||| ||||    
T  14876950 gggctaattcttagggggggaaa-ttgtggttttgatacttagcgggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcctt 14877046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 35934438 - 35934347
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||| ||||| |||||| || ||| | |||||||||  |||||||| ||||||||||| |||||  |||||||||||||||||||    
T  35934438 gggctaaatcttaaggggccaaaattataatttctttacttaggggaccaaaattacaagtttttgaaagtta--gggggaaaagtgcacttta 35934347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 50909667 - 50909771
Alignment:
Q  14 agatgcaaatgggctaattcttagggggct-aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgca 112  Q
    ||||||||| ||||||| ||||| |||| | ||||||||||||||| ||| ||||||| |||||| |||| ||||| | | ||| || || |||||||||    
T  50909667 agatgcaaaggggctaaatcttaagggggtcaaaattgtagtttttatacatagggagtcaaaatcgcaactttttaaaacttagggtggaaaaagtgca 50909766  T
Q  113 cttta 117  Q
    |||||    
T  50909767 cttta 50909771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 46638723 - 46638805
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagg 99  Q
    |||||| || |||| ||||||||||||||||||||| ||||||| | |||||   ||||||| ||| ||||||| ||||||||    
T  46638723 tgcaaagggactaaatcttagggggctaaaattgtaatttttgttcataggggatcaaaattccaactttttgaaagttaagg 46638805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 21178099 - 21178010
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaa 106  Q
    |||||| ||||||| | ||||||||  ||||||||||||||||| | |||||   ||||||||||| ||| ||| ||||| |||||||||    
T  21178099 tgcaaaagggctaaattttagggggtcaaaattgtagtttttgttcataggggatcaaaattgcaactttatgaaagttagggggggaaa 21178010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 37728590 - 37728666
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 121  Q
    ||||||||||||||||||| ||||  ||||||||||||| ||||| | |||| ||| || |||| |||||||||||||    
T  37728590 aaaattgtagtttttgtacataggaggccaaaattgcaactttttaaaagtt-aggaggaaaaaatgcactttaacct 37728666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 49306850 - 49306778
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||||||||||||||||||    ||||||||||||||||||||| ||||  ||||  ||||||||||||||    
T  49306850 aaaattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaagtt-gggggaaaaaagtgcacttta 49306778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 27257960 - 27258063
Alignment:
Q  19 caaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaa 118  Q
    |||| ||||||| ||||| |||| |||||||| ||||||||||  ||| | | ||||||||||| ||||| | |||||||||| | |||||||| ||||     
T  27257960 caaaggggctaaatcttaaggggttaaaattggagtttttgtatatagagggtcaaaattgcaactttttaaaagttaaggggag-aaagtgcattttat 27258058  T
Q  119 cctta 123  Q
    |||||    
T  27258059 cctta 27258063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 3927770 - 3927663
Alignment:
Q  16 atgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    |||||||||||||||  | ||| || | ||||||||||||||  ||| | ||| |||||||| ||||  |||| | |||||  |||||||||||||||||    
T  3927770 atgcaaatgggctaaaacatagaggaccaaaattgtagttttcatacatggggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcactt 3927671  T
Q  116 taacctta 123  Q
    || |||||    
T  3927670 tagcctta 3927663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 33310095 - 33310158
Alignment:
Q  25 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagttttt 88  Q
    |||||| || ||| |||| |||||| ||||||||||| ||||||||| |||||| |||||||||    
T  33310095 ggctaaatcatagagggccaaaattatagtttttgtatttagggagctaaaattacaagttttt 33310158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 55602459 - 55602378
Alignment:
Q  36 agggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaa 118  Q
    ||||| ||||||||||||||||| ||  ||| |  | |||||||||||||||||| ||||||  |||||||| ||||||||||    
T  55602459 aggggactaaaattgtagtttttatatatagaggactaaaattgcaagtttttgaaagttaa-aggggaaaaatgcactttaa 55602378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 37727789 - 37727693
Alignment:
Q  27 ctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 124  Q
    |||| ||||| |||| |||||||||||||||||||  ||  ||||||||||| ||| ||||| | ||||||| || ||||| | |||||||| |||||    
T  37727789 ctaaatcttaaggggttaaaattgtagtttttgtatata-agagccaaaattacaactttttaaaagttaagaggagaaaaatacactttaatcttaa 37727693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 26420392 - 26420345
Alignment:
Q  42 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 90  Q
    |||||||| || ||||| |||||||||| ||||||||||||||||||||    
T  26420392 ctaaaattataatttttatacttaggga-ccaaaattgcaagtttttga 26420345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 46637757 - 46637713
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagttttt 88  Q
    ||||||||||||||||||| |||||||| |||||  |||||||||    
T  46637757 aaaattgtagtttttgtacatagggagctaaaatcacaagttttt 46637713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 54540788 - 54540893
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||||||| ||||||||||| |||||||||||||||||||||| || | ||||||||||||||||||| |||||||||||||||||||||||||    
T  54540788 tgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttt 54540887  T
Q  117 aacctt 122  Q
    | ||||    
T  54540888 agcctt 54540893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 7267738 - 7267643
Alignment:
Q  25 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 121  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  7267738 ggctaaatcttagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaag-ggggaaaagtgcactttaacct 7267643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 7758508 - 7758405
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    |||| |||| ||| ||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||    
T  7758508 agatacaaaggggttaaatcttagggggcaaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcac 7758409  T
Q  114 ttta 117  Q
    ||||    
T  7758408 ttta 7758405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 22776809 - 22776910
Alignment:
Q  16 atgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||| ||| ||||| ||| ||||||||||||||    
T  22776809 atgcaaaggggctaattcttagggggccaaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactt 22776908  T
Q  116 ta 117  Q
    ||    
T  22776909 ta 22776910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 29931329 - 29931229
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||| ||| ||||||||||| |||||||||||||||||| |||||| || |||||||||||||||||| ||||| ||| |||||||||||||||    
T  29931329 tgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttt 29931230  T
Q  117 a 117  Q
    |    
T  29931229 a 29931229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 29980483 - 29980383
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||| ||| ||||||||||| |||||||||||||||||| |||||| || |||||||||||||||||| ||||| ||| |||||||||||||||    
T  29980483 tgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttt 29980384  T
Q  117 a 117  Q
    |    
T  29980383 a 29980383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 534605 - 534502
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||||| ||||  | ||||||||||||||||||| |||||  |||| ||||||||||    
T  534605 agatgcaaataggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcac 534506  T
Q  114 ttta 117  Q
    ||||    
T  534505 ttta 534502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 29932697 - 29932803
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| || |||| ||||| ||||  ||||||||||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||    
T  29932697 tgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttaggg-gccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 29932795  T
Q  117 aaccttaa 124  Q
    | ||||||    
T  29932796 agccttaa 29932803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 29981851 - 29981957
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| || |||| ||||| ||||  ||||||||||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||    
T  29981851 tgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttaggg-gccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttt 29981949  T
Q  117 aaccttaa 124  Q
    | ||||||    
T  29981950 agccttaa 29981957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 55191993 - 55192099
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||| ||||||||  ||||| ||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||| | ||||||    
T  55191993 tgcaaaggggttaattcttgaggggccaaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggggggaaaa-tacacttt 55192091  T
Q  117 aaccttaa 124  Q
    | ||||||    
T  55192092 agccttaa 55192099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 54539858 - 54539752
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||||| ||||| |||||||||   |||||||||||||||||| |||||| |  |||||||||||||||||| ||||||||| |||||||||||||||    
T  54539858 tgcaaatgagctaaatcttaggggatcaaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcacttt 54539759  T
Q  117 aacctta 123  Q
    | |||||    
T  54539758 agcctta 54539752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 46720045 - 46719944
Alignment:
Q  16 atgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    ||||||||||||||| |||||| || ||||||||||||||||| ||| ||||| |||||||| |||| ||||| | |||||||||||||||| |||||||    
T  46720045 atgcaaatgggctaaatcttagaggactaaaattgtagtttttatacatagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcactt 46719946  T
Q  116 ta 117  Q
    ||    
T  46719945 ta 46719944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 47610585 - 47610682
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 121  Q
    ||||||| ||||||||||   ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  47610585 gggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttaacct 47610682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 51037638 - 51037539
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||| | ||| | | ||||||||||| ||||||| |||||| ||| ||||||||||||||    
T  51037638 tgcaaaggggctaattcttagggggctaaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaa-gggagaaaagtgcacttt 51037540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 19984955 - 19984852
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||| ||| |||||  |||  ||||||||||||||||||| ||||| ||||||||||||||||||||| | ||| ||||||||||||||||    
T  19984955 agatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcac 19984856  T
Q  114 ttta 117  Q
    ||||    
T  19984855 ttta 19984852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 47614291 - 47614188
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    |||||||||  |||||| ||||||||||| |||||||| |||||  ||||||||| ||||||||||||||||||||| |||||  |||| ||||||||||    
T  47614291 agatgcaaagaggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcac 47614192  T
Q  114 ttta 117  Q
    ||||    
T  47614191 ttta 47614188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 7268835 - 7268928
Alignment:
Q  27 ctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 121  Q
    |||| ||||||| ||| ||||||||||||| | ||||||||  ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  7268835 ctaaatcttaggaggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttaacct 7268928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 24516554 - 24516464
Alignment:
Q  26 gctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    ||||| ||||| ||||| ||||||||||||||| ||||||||| ||||||||||||||||||| | ||||| ||||| |||||||||||||    
T  24516554 gctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcacttt 24516464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 12700268 - 12700178
Alignment:
Q  25 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||| || |||||||  ||||||||||||||||||||||||| ||||||||||||||||||||| |||||  ||||| |||||||||||||    
T  12700268 ggctaaatcatagggggtcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta--ggggggaaagtgcacttta 12700178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 47609793 - 47609700
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| |||||||||| | ||||||| ||||| |||||||||| | ||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  47609793 gggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcatttta 47609700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 51470068 - 51469975
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| |||||||||| | ||||||| ||||| |||||||||| ||||||||||||||||||||| | ||| || |||||||||||||||||    
T  51470068 gggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcacttta 51469975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 8456572 - 8456481
Alignment:
Q  25 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||| ||||||||||| |||||||||||||||||| ||||||  |||||||||||||||||||| | || |||||| ||||||||||||||    
T  8456572 ggctaaatcttagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaaatt-agggggaaaaagtgcacttta 8456481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 12703495 - 12703602
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||  ||||||| || |||||||| ||||||||||||||||||||||||| ||||||||| ||| ||||||| |||| || ||| ||||||||||    
T  12703495 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagtt-agagggaaaaagtgcac 12703593  T
Q  114 tttaacctt 122  Q
    |||| ||||    
T  12703594 tttagcctt 12703602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 31645079 - 31645003
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 90  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  31645079 agatgcaaatgggctaaatcttaggaggttaaaattgtagtttttgcacttagggggccaaaattgtaagtttttga 31645003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 23770402 - 23770508
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||| || ||  ||||||||| || ||||| | | |||||||| ||||| |||||    
T  23770402 agatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacataagggaccaaaattgtaacttttttaaaattaaggggagaaaattgcac 23770501  T
Q  114 tttaacc 120  Q
    |||||||    
T  23770502 tttaacc 23770508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 46721217 - 46721323
Alignment:
Q  16 atgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||| |  ||||| |||| ||||| | ||||| |||| |||||||||||||    
T  46721217 atgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcactt 46721316  T
Q  116 taacctt 122  Q
    || ||||    
T  46721317 tagcctt 46721323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 5029688 - 5029780
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||  |||||||||||||| |||||| || | |||||||||||||||||||||    
T  5029688 gggctaattcttaggggggaaaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 5029780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 52840609 - 52840702
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||  |||||||| |||||  || |||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||    
T  52840609 gggctaaatcttagggggacaaaattgttgttttgataattagggagccaaaattgcaagtttttgaaagttaggggaggaaaagggcacttta 52840702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 34019140 - 34019227
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggg 101  Q
    ||||||||||| ||||| | ||||||| | ||||||||||| ||||||| ||||| | ||||||||||||||||||| ||||||||||    
T  34019140 agatgcaaatgagctaaattttaggggaccaaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttgaaagttaagggg 34019227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 47615591 - 47615646
Alignment:
Q  62 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47615591 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 47615646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 19986065 - 19986170
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagg--gagccaaaattgcaagtttttgatagttaaggggggaaaagtgc 111  Q
    ||||||||| ||| ||| |||||| |||  ||||||||||||||| ||| ||||  | ||||||||||||||||||||| | ||||| ||||||||||||    
T  19986065 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgc 19986164  T
Q  112 acttta 117  Q
    ||||||    
T  19986165 acttta 19986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 8876010 - 8875909
Alignment:
Q  16 atgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||| || || || |||||||||  |||||   | |||||||| |||||||||||||    
T  8876010 atgcaaattggctaaatcttagggggccaaaattgtagtttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactt 8875911  T
Q  116 ta 117  Q
    ||    
T  8875910 ta 8875909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 51038800 - 51038888
Alignment:
Q  29 aattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||| ||| | ||||||||||||||||| | ||||| | ||||||||||| ||||| | ||||||||| ||||||||||||||||    
T  51038800 aattcttaagggaccaaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcacttta 51038888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 53614921 - 53614822
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    ||||||||||||||||||| |||||| ||||||||||||||| ||  ||| |  | ||||||| |||||||||| ||||||||| |||||| ||||||||    
T  53614921 tgcaaatgggctaattctt-gggggccaaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcacttt 53614823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 53616014 - 53616114
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| | |||||||||| ||||||| |||||||||||||||||| || |||   |||||| ||||| ||| | ||||||||| |||||||||||||||    
T  53616014 tgcaaaggagctaattcttggggggctgaaattgtagtttttgtacataaggaattaaaattacaagtgtttaaaagttaagggaggaaaagtgcacttt 53616113  T
Q  117 a 117  Q
    |    
T  53616114 a 53616114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 49216353 - 49216250
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||| ||||| ||||| ||||  | ||||||||||||||||| ||||| | ||||||||||| ||||||| | ||| | | ||||||||||||    
T  49216353 agatgcaaatgagctaaatcttaaggggacataattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcac 49216254  T
Q  114 ttta 117  Q
    ||||    
T  49216253 ttta 49216250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 53901393 - 53901484
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||||  ||||||||| || ||||||||||||||||||| |||| ||||||||||| ||||| | | |||  |||||||||||||||||||    
T  53901393 gggctaatatttagggggccaacattgtagtttttgtacttaaggagtcaaaattgcaacttttttaaactta--gggggaaaagtgcacttta 53901484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 535787 - 535880
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||  |||||| |||||||  |||||| ||  |||||||||||||||||||| ||||| ||| |||||||| |||||||    
T  535787 gggctaaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacacttta 535880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 5001275 - 5001203
Alignment:
Q  45 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||| |||||||||| |||||||||||||| |||||| || || ||| ||||||||||||||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcacttta 5001203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 52104583 - 52104479
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||| | ||| ||||||| ||| |||||| |||||||||||| ||||   |||||||| ||| ||||||| |||||  ||||||||||||||     
T  52104583 agatgcaaatgagttaaatcttaggtggccaaaattatagtttttgtacatagg--accaaaattacaactttttgaaagtta--gggggaaaagtgcat 52104488  T
Q  114 tttaacctt 122  Q
    |||||||||    
T  52104487 tttaacctt 52104479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 40426785 - 40426877
Alignment:
Q  26 gctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaatt-gcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||| || |||||||| ||||||||| ||||||||  || || ||| ||||| |||| ||||| | ||||||||||||||||||||||||||    
T  40426785 gctaaatcatagggggccaaaattgtaatttttgtatataaggggccgaaatttgcaacttttttaaagttaaggggggaaaagtgcacttta 40426877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 54987002 - 54987110
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| | ||||| |||||| |||  |||||| |||||||| ||| |||||  | ||||| |||| ||||||| | |||  |||||||||||||||    
T  54987002 agatgcaaaggagctaaatcttagagggtcaaaattatagtttttatacataggggactaaaatcgcaactttttgaaactta--gggggaaaagtgcac 54987099  T
Q  114 tttaaccttaa 124  Q
    |||||||||||    
T  54987100 tttaaccttaa 54987110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 23769962 - 23769862
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||| || || ||||||||| | |||||||||||||||| || ||| |    |||||||||| || |||| ||||||||| ||||||||||||    
T  23769962 agatgcaaatgagcgaaatcttaggggtc-aaaattgtagtttttgcacatagaggattaaaattgcaacttgttgaaagttaagggtggaaaagtgcac 23769864  T
Q  114 tt 115  Q
    ||    
T  23769863 tt 23769862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 6170349 - 6170281
Alignment:
Q  43 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgc 111  Q
    |||||||||| |||||||||||| ||   ||||||||||||||||||| ||||| ||| | ||||||||    
T  6170349 taaaattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagttatgggtgaaaaagtgc 6170281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 11671371 - 11671438
Alignment:
Q  49 tgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||||| || |||||| || |||||||||||||||||| |||| ||| || ||||||||||||||    
T  11671371 tgtagtttttatatttagggggctaaaattgcaagtttttgaaagtt-aggcggaaaaagtgcacttta 11671438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 51347371 - 51347267
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||| ||| ||||||||||  ||||||||  ||||||| | ||| |  |||||||||||| ||||| | | ||||| |||| ||||||||||||    
T  51347371 tgcaaacgggttaaatcttagggggtcaaaattgtcatttttgttcatagaggaccaaaattgcaactttttcaaacttaagagggggaaagtgcacttt 51347272  T
Q  117 aacct 121  Q
    |||||    
T  51347271 aacct 51347267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 51470481 - 51470552
Alignment:
Q  45 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||| ||||||||||   | ||||||||||||||||| |||| ||||||||| |||||||||||    
T  51470481 aaattgtggttttggtacttaggggatctaaattgcaagtttttgaaagtt-aggggggaagagtgcacttta 51470552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 477
Target Start/End: Original strand, 8835612 - 8835671
Alignment:
Q  418 atacaggatgtgaaatcacaaaataagattggtgtaggtgatctttgtgatggcctttat 477  Q
    ||||||||||||||| |||| || | ||||||| | ||| ||||||||||||||||||||    
T  8835612 atacaggatgtgaaaacacagaagatgattggtttgggtaatctttgtgatggcctttat 8835671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 28262277 - 28262196
Alignment:
Q  35 tagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||| |||||||| |||||  ||| | ||| |||||||| ||||  |||||| ||||| ||||||||||||||||||||    
T  28262277 tagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagtta-ggggggaaaagtgcacttta 28262196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 28263127 - 28263209
Alignment:
Q  35 tagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||| |||||||| |||||  ||| | ||| |||||||| ||||  |||| | ||||| ||||||||||||||||||||    
T  28263127 tagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcacttta 28263209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 52276389 - 52276307
Alignment:
Q  35 tagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||| |||||||| |||||  ||| | ||| |||||||| ||||  |||||| || || ||||||||||||||||||||    
T  52276389 tagggggccaaaattgttgttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcacttta 52276307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 52281563 - 52281645
Alignment:
Q  35 tagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||| |||||||| |||||  ||| | ||| |||||||| ||||  |||||| || || ||||||||||||||||||||    
T  52281563 tagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcacttta 52281645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 6249686 - 6249633
Alignment:
Q  43 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 96  Q
    ||||||||||||||||||||||| ||    |||||||||||||||||| |||||    
T  6249686 taaaattgtagtttttgtacttaagggattaaaattgcaagtttttgaaagtta 6249633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 18442716 - 18442628
Alignment:
Q  35 tagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta-aggggggaaaagtgcactttaacctt 122  Q
    |||||||| ||||||||||||||  ||| | ||| |||||||| ||||  |||||| |||||  |||||| ||||||||||||| ||||    
T  18442716 tagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagcctt 18442628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 19487790 - 19487702
Alignment:
Q  35 tagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta-aggggggaaaagtgcactttaacctt 122  Q
    |||||||| ||||||||||||||  ||| | ||| |||||||| ||||  |||||| |||||  |||||| ||||||||||||| ||||    
T  19487790 tagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagcctt 19487702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 2e-32; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 11662549 - 11662656
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| |||||||||||| |||||| |||||| |||||||||||| ||| |||| |||||||||||||||||| |||||||||||||||| ||||||||    
T  11662549 tgcaaaggggctaattcttggggggccaaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcacttt 11662648  T
Q  117 aaccttaa 124  Q
    ||||||||    
T  11662649 aaccttaa 11662656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 18371530 - 18371427
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||| ||||| | ||||||||||||||    
T  18371530 agatgcaaatgtgctaaatcttagggggccaaaattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcac 18371431  T
Q  114 ttta 117  Q
    ||||    
T  18371430 ttta 18371427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 42886281 - 42886388
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||| | ||||||||||| ||||||| ||||| | || |||||||||||    
T  42886281 agatgcaaatgggctaaatcttagggggctaaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcac 42886380  T
Q  114 tttaacct 121  Q
    ||||||||    
T  42886381 tttaacct 42886388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 22630465 - 22630550
Alignment:
Q  32 tcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||| || |||||||||||||||||    
T  22630465 tcttagggggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagttatggagggaaaagtgcacttta 22630550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 31659719 - 31659625
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggggg-aaaagtgcacttta 117  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||| | |||||||| |||||||||| ||||| |||||| ||||||||||||||    
T  31659719 gggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcacttta 31659625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 17781757 - 17781664
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| |||||||||| | ||||||| ||||| |||||||||| | ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  17781757 gggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 17781664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 18372452 - 18372544
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaa 107  Q
    |||| |||| ||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| | || |||||||||||    
T  18372452 agatacaaaggggctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaaatt-aggggggaaaa 18372544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 127438 - 127340
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    ||||| |||||||| ||||||||||||||| |||| ||||| ||||||||||  |||||||||||||||||||| |||| ||||||||||||||||||||    
T  127438 tgcaattgggctaaatcttagggggctaaa-ttgtggttttggtacttaggggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttt 127341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 22629592 - 22629486
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaag---gggggaaaagtg 110  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||  ||||||||| ||||||||||| | |||||   ||||||||| ||    
T  22629592 agatgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggagggggaaaaatg 22629493  T
Q  111 cacttta 117  Q
    |||||||    
T  22629492 cacttta 22629486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 7501847 - 7501950
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||  ||||| ||||| |||||||| |||||  ||||||||| ||||||||||||||||||||| |||||  |||||||||||||||    
T  7501847 agatgcaaaggggctacatcttaaggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 7501946  T
Q  114 ttta 117  Q
    ||||    
T  7501947 ttta 7501950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 3227599 - 3227692
Alignment:
Q  24 gggctaattcttagggg-gctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||| |||||| |||| ||||| |||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  3227599 gggctaaatcttaggggtgctaaa-ttgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 3227692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 11658480 - 11658382
Alignment:
Q  19 caaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||| ||||||||||||  ||| | ||||||||||||||||||| ||||| || ||||||||| |||||||| ||||||||||||||||||||| ||||    
T  11658480 caaaggggctaattcttgagggaccaaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaattta 11658382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 17782558 - 17782651
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||   ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  17782558 gggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 17782651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 7500560 - 7500453
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||||||||| |||||||| |||| | ||||||| |   ||||||||||||||||||| ||||||| ||||||||||||||    
T  7500560 agatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagttaag-ggggaaaagtgcac 7500462  T
Q  114 tttaacctt 122  Q
    |||| ||||    
T  7500461 tttagcctt 7500453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 20163585 - 20163659
Alignment:
Q  48 ttgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| ||| |||||||||||| ||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcctt 20163659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 14999150 - 14999249
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| |||||||| || |||||||||||||||||| |||||| | |||||||||||| |||||| | || |||||||||||||||||    
T  14999150 agatgcaaaggggctaaatcttagggcgccaaaattgtagtttttgtatttagggggtcaaaattgcaag-ttttgaaaatt-aggggggaaaagtgcac 14999247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 31949418 - 31949325
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||   ||||||| ||||| |||||||||| ||||||||||||||||||||| | ||| || |||||||||||||||||    
T  31949418 gggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcacttta 31949325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 48934901 - 48935001
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    ||||||||||||||||||| ||||   |||||| |||||||||||||||| | | ||||||| ||||||||||| ||||| ||| |||||| ||||||||    
T  48934901 tgcaaatgggctaattcttgggggatcaaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcacttt 48935000  T
Q  117 a 117  Q
    |    
T  48935001 a 48935001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 128614 - 128704
Alignment:
Q  32 tcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||||||   ||||||| ||||| |||||||||| | ||||||||||| ||||||| ||||| || ||||||||||||||||||||||    
T  128614 tcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcactttaacctt 128704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 31949807 - 31949900
Alignment:
Q  24 gggctaattcttagggg-gctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||| |||||| |||| ||||| ||| |||||| ||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  31949807 gggctaaatcttaggggtgctaaa-ttgtggttttggtatttagggggccaaaattgcaagtttttgaaagttagggggggaagagtgcacttta 31949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 47525372 - 47525465
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||   ||||||| |||||  ||||||||| || |||||||||||||||||| |||||  |||||||||||||||||||    
T  47525372 gggctaaatcttaggggggctaaattgtggttttgatacttagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 47525465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 21505520 - 21505419
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||| ||||  ||||||||||||||||||  | ||| |||||||| |||| ||||||| |||||  |||||||||||||||    
T  21505520 agatgcaaaggggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagtta--gggggaaaagtgcac 21505423  T
Q  114 ttta 117  Q
    ||||    
T  21505422 ttta 21505419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 47369887 - 47369779
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||| ||||| |||||| ||||||||||||||| |  || |||||||||||||||||| ||||| |||   |||||||||     
T  47369887 agatgcaaaggggctaaatcttaaggggccaaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttaggggaaaaaaagtgcat 47369788  T
Q  114 tttaacctt 122  Q
    |||| ||||    
T  47369787 tttagcctt 47369779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 769519 - 769416
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||||| ||||||| |||| || |||||| || ||||||||||||||  | ||||||||||||||||||| | |||  || |||||| |||||    
T  769519 agatgcaaatgggttaattctaagggagccaaaattataatttttgtacttaggatgtcaaaattgcaagtttttgaaaattacaggtggaaaattgcac 769420  T
Q  114 ttta 117  Q
    ||||    
T  769419 ttta 769416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 46 - 113
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  46 aattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||| |||||  |||||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 3227203 - 3227111
Alignment:
Q  24 gggctaattctta-gggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||| |||||||||| |||| ||||| |||||||||| ||||||||||||||||||||| | || ||||||| |||||||||||||    
T  3227203 gggctaaatcttaagggggctaaa-ttgtggttttggtacttagggggccaaaattgcaagtttttgaaaatt-agggggggaaagtgcacttta 3227111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 30439356 - 30439455
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||||||| ||||||||| |||||||||||||||||| || |||| |  |||||| | || ||||||| |||||||||| | ||||||||||||    
T  30439356 tgcaaaggggctaaatcttaggggactaaaattgtagtttttgaacataggaaatcaaaatcgtaactttttgaaagttaaggggag-aaagtgcacttt 30439454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 34174010 - 34174080
Alignment:
Q  46 aattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||| ||||| |||||||||| |||||||||||||| |||||| || | |||||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 34174080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 34351587 - 34351522
Alignment:
Q  25 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 90  Q
    |||||| ||||| |||| |||||||||||||| | ||||| | |||||||||||||||||||||||    
T  34351587 ggctaaatcttaaggggttaaaattgtagtttctatacttggagagccaaaattgcaagtttttga 34351522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 31661024 - 31661112
Alignment:
Q  34 ttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||| |||||||| |||||||||||| ||  | | ||||||||||| ||||||| |||||  | ||| ||||||||||||| ||||    
T  31661024 ttaggggactaaaattatagtttttgtacgtaaagggtcaaaattgcaaatttttgaaagttagagaggggaaagtgcactttagcctt 31661112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 5111492 - 5111440
Alignment:
Q  70 gccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||||  ||||||||||| | |||||||| ||||||||||||||| ||||    
T  5111492 gccaaaatcacaagtttttgaaacttaaggggtgaaaagtgcactttagcctt 5111440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 34352799 - 34352891
Alignment:
Q  32 tcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 124  Q
    |||||| |||| |||||| |||||| |||||||| ||  ||||||| | |||||||||| | |||  || | |||||||||||||| ||||||    
T  34352799 tcttagagggccaaaattatagtttatgtacttaagggaccaaaatagaaagtttttgaaaattagaggtgaaaaagtgcactttagccttaa 34352891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 43900484 - 43900590
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||| | ||| | || |||||| |||| |||||||||| || ||||||| |||||||| ||| ||||| | ||||| |  | |||||||||||    
T  43900484 agatgcaaatgagataaatttttgggggc-aaaactgtagtttttatatttagggaaccaaaattacaaatttttaaaagtta-gaagagaaaagtgcac 43900581  T
Q  114 tttaacctt 122  Q
    |||||||||    
T  43900582 tttaacctt 43900590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 2e-32; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 24426080 - 24426179
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctta 123  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||  ||||| |||||||||||||||||||    
T  24426080 gggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagaggggggaaagtgcactttaacctta 24426179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 24422896 - 24422803
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  24422896 gggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcacttta 24422803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 51684472 - 51684369
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||||| ||| ||||| ||||||||||||| ||||| | ||||||||||||||||||||||    
T  51684472 agatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcac 51684373  T
Q  114 ttta 117  Q
    ||||    
T  51684372 ttta 51684369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 37526873 - 37526982
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||||||| | |||||||| |||| | || |||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  37526873 agatgcaaaggggctaaatcttaggggcc-aaaattgtggtttctatatttagggagccaaaattgcaagtttttgaaagttaaggggggaaaagtacac 37526971  T
Q  114 tttaaccttaa 124  Q
    |||||||||||    
T  37526972 tttaaccttaa 37526982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 11436148 - 11436040
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||| ||||||    ||||||||||||||||||||| |||||| |||||||||||||||    
T  11436148 agatgcaaatgggttaaatcttagggggccaaaattgtagtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcac 11436049  T
Q  114 tttaacctt 122  Q
    |||| ||||    
T  11436048 tttagcctt 11436040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 39222468 - 39222572
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtt-aaggggggaaaagtgca 112  Q
    |||||||||||||| || |||||| ||||||| |||||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||| |||||||||    
T  39222468 agatgcaaatgggcaaaatcttagagggctaacattgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgca 39222567  T
Q  113 cttta 117  Q
    |||||    
T  39222568 cttta 39222572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 11437194 - 11437297
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||| ||| ||| ||| ||||||||||| |||||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||| ||||||||||    
T  11437194 agatgtaaaagggttaaatcttagggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcac 11437293  T
Q  114 ttta 117  Q
    ||||    
T  11437294 ttta 11437297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 52275063 - 52274965
Alignment:
Q  25 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctta 123  Q
    |||||| ||||||||| | ||||||||||||||||||||||||| | ||||||||||||||||||| ||||| ||||| |||||||||||||| |||||    
T  52275063 ggctaaatcttaggggcccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcctta 52274965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 23980463 - 23980564
Alignment:
Q  16 atgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    ||||||| ||||||| ||||||| | | |||||| |||||||||||||||||||||||||||||||||||||| | |||||  |||||||||||||||||    
T  23980463 atgcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcactt 23980562  T
Q  116 ta 117  Q
    ||    
T  23980563 ta 23980564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 36612958 - 36612851
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| || |||| |||||||||| ||||||||||||||||||||||| | | |||||||||||| ||||||| |||||||||||||||| |||||    
T  36612958 agatgcaaagggactaaatcttagggggttaaaattgtagtttttgtacttaag-atccaaaattgcaaatttttgaaagttaaggggggaaaaatgcac 36612860  T
Q  114 tttaacctt 122  Q
    |||| ||||    
T  36612859 tttagcctt 36612851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 39153111 - 39153219
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||| ||| |||||| |||  ||||||||||||||||||| || || ||||||||||||||||||||| | ||||||||| ||||||||||    
T  39153111 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcac 39153210  T
Q  114 tttaacctt 122  Q
    |||||||||    
T  39153211 tttaacctt 39153219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 45149965 - 45150072
Alignment:
Q  14 agatgcaaatgggctaattcttagggggct-aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgca 112  Q
    ||||||||| ||||||| ||||||||||   |||||||| ||||||||||||| || ||||||||||||||||||||| |||| ||||||||||||||||    
T  45149965 agatgcaaaggggctaaatcttagggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgca 45150063  T
Q  113 ctttaacct 121  Q
    |||||||||    
T  45150064 ctttaacct 45150072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 43058891 - 43058785
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||| ||| ||||||| |||||| |||||||||||||||||||||||||||||| | ||||||||||||||||| | |||| |||||| ||||||| ||    
T  43058891 agatgtaaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaagtt-agggggaaaaagtgtac 43058793  T
Q  114 tttaacct 121  Q
    ||||||||    
T  43058792 tttaacct 43058785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 45148686 - 45148584
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||| ||| ||||||||||  ||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||| ||| ||||||||||    
T  45148686 agatgcaaaggggttaaatcttaggggggcaaaattgtagttttt-tacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcac 45148588  T
Q  114 ttta 117  Q
    ||||    
T  45148587 ttta 45148584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 50680437 - 50680331
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||| ||| ||||||||| |||||||| |||||||| ||||||||| ||||||||||||||||||||  ||||||| |||||||| |||||    
T  50680437 agatgcaaaggggttaaatcttaggggactaaaattatagtttttatacttagggggccaaaattgcaagtttttggaagttaag-ggggaaaaatgcac 50680339  T
Q  114 tttaacct 121  Q
    ||||||||    
T  50680338 tttaacct 50680331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 52827443 - 52827345
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||| |||||||||| | ||||||| ||||| |||||||||| | ||||||||||||||||||| ||||| |||||||||||||||||||| ||||    
T  52827443 gggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcctt 52827345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 39699772 - 39699864
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||| ||||||||||||| ||||||||||| | |||||||||||||| |||| |||| |||||||||||||||||||||    
T  39699772 gggctaaatcttagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagtt-aggggggaaaagtgcacttta 39699864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 52828075 - 52828172
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 121  Q
    ||||||| ||||||||||   ||||||| ||||| |||||||||||||||||||||||||||||||| | |||  |||||||||||||||||||||||    
T  52828075 gggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaagtttttgaaaattagagggggaaaagtgcactttaacct 52828172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 35067000 - 35067100
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||||||| | ||||||||| ||||||||||||||||| | ||||| |||||||| |||| ||||||| | |||||||||||||||||||||||    
T  35067000 tgcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcacttt 35067099  T
Q  117 a 117  Q
    |    
T  35067100 a 35067100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 51685760 - 51685863
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||||||||  ||||||||||||||||||| ||| | |||||||| |||| ||||||| |||||  |||||||||||||||    
T  51685760 agatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcac 51685859  T
Q  114 ttta 117  Q
    ||||    
T  51685860 ttta 51685863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 36613910 - 36614002
Alignment:
Q  25 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||| ||||||||||  ||||||||||||||||||||||||| ||||||||| ||||||||| | ||||| ||| |||||| |||||||||    
T  36613910 ggctaaatcttagggggtcaaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcacttta 36614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 44404548 - 44404440
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    |||||||||| |||||| | ||||||||| |||||| |||||||||||||||||| || |||||||| ||||||||| ||||| | ||| |||||||||     
T  44404548 agatgcaaattggctaaattttagggggccaaaattatagtttttgtacttagggggctaaaattgctagtttttgaaagttatgagggaaaaagtgcat 44404449  T
Q  114 tttaacctt 122  Q
    |||| ||||    
T  44404448 tttagcctt 44404440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 14999360 - 14999288
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| |||| ||||||||||||| |||||||    
T  14999360 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaagtacacttta 14999288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 39152007 - 39151930
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 121  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||| | ||||||||| |||| |||||||||||||    
T  39152007 aaaattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaaaatgcactttaacct 39151930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 52276168 - 52276265
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 121  Q
    ||||||| ||||||||| ||||| || |||||||||||||||||| ||||||||| ||| ||||||| |||||   |||| |||||||||||||||||    
T  52276168 gggctaaatcttaggggactaaatttatagtttttgtacttagggggccaaaattacaaatttttgaaagttagaagggggaaagtgcactttaacct 52276265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 35594321 - 35594215
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| | ||||||| | ||||||||||||||  ||||||||| | ||||||||||||||||||| ||||| ||| ||||||||||||    
T  35594321 agatgcaaaggggctaaattttaggggtc-aaaattgtagttttaatacttaggg-gtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcac 35594224  T
Q  114 tttaacctt 122  Q
    |||| ||||    
T  35594223 tttagcctt 35594215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 45157204 - 45157311
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||| ||| |||||  |||  ||||||||||||||||||| ||||| ||||||||||||||||||||| | || ||||||| |||||||||    
T  45157204 agatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaactt-agggggggaaagtgcac 45157302  T
Q  114 tttaacctt 122  Q
    |||| ||||    
T  45157303 tttagcctt 45157311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 39698639 - 39698561
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    |||||| |||||| ||||||||||| |||||||||| |||||||| | |||||||||||| ||||||||||||| ||||    
T  39698639 aaaattatagtttctgtacttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcctt 39698561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 50681632 - 50681702
Alignment:
Q  47 attgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||||||| || |||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  50681632 attgtagtttttatagttagagagccaaaattgcaagtttttgaaaattaagaggggaaaagtgcacttta 50681702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 33088615 - 33088720
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||||||| |||||||| |  ||||||||||||||||||||||  | | |||||||||||||||||||  ||||  | ||||||||||||||||    
T  33088615 tgcaaaggggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcacttt 33088714  T
Q  117 aacctt 122  Q
    | ||||    
T  33088715 agcctt 33088720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 41364924 - 41364832
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||   ||||||| ||||| ||| |||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  41364924 gggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcacttta 41364832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 46066631 - 46066530
Alignment:
Q  11 cagagatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtg 110  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||||||||||| || || || ||||| |||| ||||||| |||||  || |||||||||    
T  46066631 cagagatgcaaattggctaaatcttagggg-ctaaaattgtagtttttgtacataaggggctaaaatcgcaactttttgaaagtta--ggaggaaaagtg 46066535  T
Q  111 cactt 115  Q
    |||||    
T  46066534 cactt 46066530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 43378708 - 43378815
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| | ||||| ||||||| ||  ||||||||| |||||||||||||||   |||||||| |||||||||| |||||| | | |||||||||||    
T  43378708 agatgcaaaggtgctaaatcttaggtggtcaaaattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaa-gagagaaaagtgcac 43378806  T
Q  114 tttaacctt 122  Q
    |||||||||    
T  43378807 tttaacctt 43378815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 43060001 - 43060104
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||| ||||| ||||| ||||  |||||||||||||||||||||| || | ||||||| ||| ||||||| |||||  ||||| ||||| |||    
T  43060001 agatgcaaatgagctaaatcttaaggggtcaaaattgtagtttttgtacttaaggggtcaaaatttcaaatttttgaaagttagagggggtaaagtacac 43060100  T
Q  114 ttta 117  Q
    ||||    
T  43060101 ttta 43060104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 41366136 - 41366233
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||| ||||||||||||||| |||| |||||  |||||| || || ||||||||| |||||||| ||||| | |||||||||||||||||| ||||    
T  41366136 gggctaaatcttagggggctaaa-ttgtggttttgatacttaaggggctaaaattgcatgtttttgaaagttaggaggggaaaagtgcactttagcctt 41366233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 7674602 - 7674531
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||||||||||||||||||||  |||||||||||||||||| | |||| |||||||||||| ||||||||    
T  7674602 aaaattgtagtttttgtacttaggg-cccaaaattgcaagtttttaaaagtt-aggggggaaaagggcacttta 7674531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 7675454 - 7675546
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaa 106  Q
    ||||||||| ||||||| ||||||||||  |||||| || ||||| ||||||||  | ||||||||||||||||||| |||||| || |||||    
T  7675454 agatgcaaaggggctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtggaaa 7675546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 45156137 - 45156051
Alignment:
Q  32 tcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaa 118  Q
    |||||| ||| |||||||||||||||||||| |||   | |||||||| |||||||||| | ||||||| ||||||||| |||||||    
T  45156137 tcttagagggttaaaattgtagtttttgtacatagaaggtcaaaattgtaagtttttgaaacttaagggaggaaaagtgaactttaa 45156051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 7983137 - 7983049
Alignment:
Q  32 tcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 121  Q
    ||||||||||  |||||||| |||||  ||| ||||| |||||||||||||||| |||| |||| | ||| |||||||||||||||||||    
T  7983137 tcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgttgaaagtt-acgggagaaaagtgcactttaacct 7983049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 11190461 - 11190388
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||  |||||| |||||||||||| ||||| | | |||||||| |||||||||||||||    
T  11190461 aaaattgcagtttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcacttta 11190388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 25652820 - 25652744
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 90  Q
    ||||||||||||||||| |||||| |||| ||| || || |||||||||||| ||   |||||||||||||||||||    
T  25652820 agatgcaaatgggctaaatcttagcgggccaaatttataatttttgtacttaagggatcaaaattgcaagtttttga 25652744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 35595187 - 35595291
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgt-agtttttgtacttagggagccaaaattgc-aagtttttgatagttaaggggggaaaagtgc 111  Q
    ||||||||| ||||||| ||||||||| | |||||||| ||||||| ||| ||||| | ||||||||| |||||||| | |||||  ||||||||||| |    
T  35595187 agatgcaaaggggctaaatcttaggggcc-aaaattgttagtttttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtac 35595285  T
Q  112 acttta 117  Q
    ||||||    
T  35595286 acttta 35595291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 44411964 - 44412032
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtt 85  Q
    |||||| || |||| |||||  ||| ||||||||||||||||||||||||||  | |||||||||||||    
T  44411964 tgcaaagggcctaaatcttaaaggggtaaaattgtagtttttgtacttaggggactaaaattgcaagtt 44412032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 14999983 - 15000058
Alignment:
Q  47 attgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||| ||||||||||||||   ||||||||||||||||| | ||||| || || ||||||| |||||| ||||    
T  14999983 attgtagattttgtacttaggggatcaaaattgcaagtttttaaaagttagggaggaaaaagtgaactttagcctt 15000058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 39221405 - 39221356
Alignment:
Q  74 aaattgcaagtttttgatagtta-aggggggaaaagtgcactttaacctt 122  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||| ||||    
T  39221405 aaattgcaagtttttgaaagttagaggggggaaaagtgcaatttagcctt 39221356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 69; Significance: 9e-31; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 17573 - 17473
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||| |||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||| |||||||||||||    
T  17573 tgcaaaggggataattcttggggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcacttt 17474  T
Q  117 a 117  Q
    |    
T  17473 a 17473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 18781 - 18874
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| | ||| ||||| |||||| |||||||||||| |||||  |||||||||||| ||||| | ||||| | ||| ||||||||||||||    
T  18781 gggctaaattttaaggggccaaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcacttta 18874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 64; Significance: 9e-28; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 61454 - 61557
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| || |||||||| |||||| |||||||||||||||||| || |||||||||||||||||| | ||||||| ||||||||||||    
T  61454 agatgcaaaagggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcac 61553  T
Q  114 ttta 117  Q
    ||||    
T  61554 ttta 61557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 60196 - 60093
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| || |||||||  ||||||||||||||| ||| ||||| | ||||||||||||||||| | |||||  || ||||||||||||    
T  60196 agatgcaaaggggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcac 60097  T
Q  114 ttta 117  Q
    ||||    
T  60096 ttta 60093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 1829598 - 1829704
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||||| ||||||||| | ||||||||||||||||| | ||||| ||||  ||||||||||    
T  1829598 agatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcac 1829697  T
Q  114 tttaacc 120  Q
    |||||||    
T  1829698 tttaacc 1829704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 7316289 - 7316392
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||| ||||| |||||||| ||||   || |||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  7316289 agatgcaaaggggctaaatcttaaggggccaaaattgtggtttcaatatttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcac 7316388  T
Q  114 ttta 117  Q
    ||||    
T  7316389 ttta 7316392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 16704522 - 16704595
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  16704522 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcacttta 16704595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 7314985 - 7314883
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||||||| ||||||||||  |||||||| |||||  ||||||||| ||||||||||||||||||||| |||||  |||||||||||||||    
T  7314985 agatgcaaaggggctaaatcttagggggtcaaaattgttgttttgatacttaggg-gccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 7314887  T
Q  114 ttta 117  Q
    ||||    
T  7314886 ttta 7314883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 27322067 - 27322165
Alignment:
Q  18 gcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||| ||||||||||||||||||  |||||||| ||||| |||||||||| |||||||||||||| |||||| || | |||||||||||||||||||||    
T  27322067 gcaaaggggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 27322165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 8659361 - 8659268
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||||   ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  8659361 gggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 8659268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 10784696 - 10784595
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggg-gggaaaagtgcactt 115  Q
    |||||| ||||||| |||| |||||| ||||||||||||||| ||||||||| |  |||||||||||||||| | ||||||||| |||||||||||||||    
T  10784696 tgcaaaggggctaaatctttgggggccaaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcactt 10784597  T
Q  116 ta 117  Q
    ||    
T  10784596 ta 10784595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 8822791 - 8822891
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    ||||| |||||||| ||||||||||   ||||||| ||||| |||||||||| | ||||||||||||||||||| |||||| | ||||||||||||||||    
T  8822791 tgcaattgggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcacttt 8822890  T
Q  117 a 117  Q
    |    
T  8822891 a 8822891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 8821967 - 8821876
Alignment:
Q  26 gctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||| ||||||||||   ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  8821967 gctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 8821876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 14822453 - 14822366
Alignment:
Q  27 ctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcact 114  Q
    |||| ||||||||||| ||||||||||||| | |||||| || ||||||||||||||||||||| | |||||||| ||||||||||||    
T  14822453 ctaaatcttagggggccaaaattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcact 14822366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 29473180 - 29473075
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| |||| ||||||| | |||| ||||||||  ||||||| | |||||| |||||||||||| ||||| | | ||||||||||||||||||||||     
T  29473180 tgcaaaggggccaattcttggagggccaaaattgttatttttgttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaagtgcacttg 29473081  T
Q  117 aacctt 122  Q
    ||||||    
T  29473080 aacctt 29473075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 8660211 - 8660306
Alignment:
Q  26 gctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||| ||||||||||   ||||||| ||||| |||||||||| | ||||||||||||||||||| ||||| | |||||||||||||||||| ||||    
T  8660211 gctaaatcttaggggggctaaattgtggttttggtacttaggg-gtcaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcctt 8660306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 16703653 - 16703573
Alignment:
Q  34 ttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||| || ||  |||||||||||||||||||    
T  16703653 ttagggggctaaaattgtagtttttgtatttatgga-tcaaaattgcaagtttttgaaagata--gggggaaaagtgcacttta 16703573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 27437931 - 27437831
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| | ||||| ||||||||||  ||||||||||||||| |   ||||| ||||||||||||| ||||| | |||||||||| ||||||||||||||    
T  27437931 tgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcacttt 27437832  T
Q  117 a 117  Q
    |    
T  27437831 a 27437831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 6842306 - 6842381
Alignment:
Q  42 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||||||||||||| || ||||| ||||||||||||| ||||||| | |||  |||||||||||||||||||    
T  6842306 ctaaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcacttta 6842381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 14823583 - 14823674
Alignment:
Q  27 ctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggg-gaaaagtgcacttta 117  Q
    |||| ||||||||||| ||||||||||||| |||||||| || || |||||||||||||||| | | |||||||||  ||||||||||||||    
T  14823583 ctaaatcttagggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcacttta 14823674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 3721708 - 3721610
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 122  Q
    ||||||| ||||| ||||   ||||| | ||||| |||||||||| | ||||||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  3721708 gggctaaatcttaaggggtctaaattatggttttggtacttagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctt 3721610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 5658859 - 5658757
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||||||||||| ||||| |||   ||||||||||||||||||| |||||| | ||||||  || ||||| | | |||||||||||||| ||||||||    
T  5658859 tgcaaatgggctaaatcttaagggatcaaaattgtagtttttgtacatagggaactaaaattataactttttaaaacttaaggggggaaaaatgcacttt 5658760  T
Q  117 aac 119  Q
    |||    
T  5658759 aac 5658757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 10785911 - 10786000
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaa 107  Q
    |||||| ||||||| ||||| |||| |||||||||||||||||||||||||| |  |||||||||| ||||| | |||| |||||||||||    
T  10785911 tgcaaaggggctaaatcttaaggggttaaaattgtagtttttgtacttagggggttaaaattgcaaatttttaaaagtt-aggggggaaaa 10786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 34834584 - 34834681
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 121  Q
    ||||||| ||||||||||   ||||||| |||||  ||||||||    ||||||||||||||||||| ||||| || |||||||||||||||||||||    
T  34834584 gggctaaatcttaggggggctaaattgtggttttgatacttaggagatcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttaacct 34834681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 3722533 - 3722605
Alignment:
Q  45 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||| |||||||| | | ||||||||||||||||||| ||||| || |||||||||||||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcacttta 3722605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 26575067 - 26575131
Alignment:
Q  32 tcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 96  Q
    ||||||||||| |||||||||||||||||||||| || |  |||||||||||||||||| |||||    
T  26575067 tcttagggggccaaaattgtagtttttgtacttaaggggttaaaattgcaagtttttgaaagtta 26575131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 3333024 - 3333129
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||||||| | |||| ||| |||||||||||||||||||| ||||| |||||||| |||| ||||| | | |||   ||||||||||||| |||    
T  3333024 tgcaaaggggctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttagaaggggaaaagtgcaattt 3333123  T
Q  117 aacctt 122  Q
    | ||||    
T  3333124 agcctt 3333129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 12350898 - 12350832
Alignment:
Q  19 caaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagttt 86  Q
    |||| ||||||| |||||||||| |||||||||||||||| ||| ||||| | |||||||||||||||    
T  12350898 caaaggggctaaatcttagggggttaaaattgtagtttttatacataggg-gtcaaaattgcaagttt 12350832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 27318418 - 27318318
Alignment:
Q  18 gcaaatgggctaattcttagggggcta--aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    ||||| ||||||||||||||||||     ||||||| ||||| |||||||||| |||||||||||||| |||||| || | |||||| ||| ||||||||    
T  27318418 gcaaaggggctaattcttaggggggggggaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-agggggaaaaggtgcactt 27318320  T
Q  116 ta 117  Q
    ||    
T  27318319 ta 27318318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 26717137 - 26717182
Alignment:
Q  72 caaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||||    
T  26717137 caaaattgcaagtttctgaaacttaaggggggaaaagtgcacttta 26717182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 338
Target Start/End: Original strand, 6341594 - 6341709
Alignment:
Q  223 attaagcctattcatgttgctttacctaatggtacatctgtcttagtttattatgctggtactgttagtttttcccctagttttcatatcactaatgttt 322  Q
    ||||| ||||| |||||| |||||||||||||| |  ||||  | ||| | |||||||| |||| |  |||||| |||  ||| ||||| |||||||| |    
T  6341594 attaaacctatgcatgttactttacctaatggttccactgtgattgttcactatgctggcactgctgttttttcaccttttttccatattactaatgtct 6341693  T
Q  323 tatattcacctcattt 338  Q
    ||||||||||||||||    
T  6341694 tatattcacctcattt 6341709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 6840298 - 6840199
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||  ||| |||||| |||  |||||| ||||||||||| ||| || |||||||| |||| ||||||| | |||||||||  |||||||||    
T  6840298 agatgcaaagggattaaatcttagagggtcaaaattatagtttttgtatttaaggggccaaaatcgcaactttttgaaacttaaggggg--aaagtgcac 6840201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 30495695 - 30495794
Alignment:
Q  17 tgcaaatgggctaattcttag-ggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    |||||||||||||| |||||| ||||| ||||||||  ||||||||| |||||    ||||| |||| ||||||| |||||  |||| ||||||||||||    
T  30495695 tgcaaatgggctaaatcttagaggggccaaaattgttatttttgtacataggggattaaaatcgcaactttttgaaagtta--ggggaaaaagtgcactt 30495792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 17496880 - 17496816
Alignment:
Q  37 gggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggg 101  Q
    |||||| ||||||| ||||||||||||||| | |  ||||||| |||||||||| ||||| ||||    
T  17496880 gggggccaaaattgcagtttttgtacttagagggttaaaattgtaagtttttgaaagttaggggg 17496816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 26574690 - 26574622
Alignment:
Q  49 tgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||||||||||||| |   ||||||||||||||||||| |||||  || || ||| |||||||||    
T  26574690 tgtagtttttgtacttagaggttcaaaattgcaagtttttgaaagttagaggtgggaaattgcacttta 26574622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 337 - 236
Alignment:
Q  16 atgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 115  Q
    ||||||| ||||||||||||||||| | |||||| |||||||||||| |||||  |||||||||||| ||||||| |||||||||||| |||||||||||    
T  337 atgcaaaggggctaattcttaggggaccaaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactt 238  T
Q  116 ta 117  Q
    ||    
T  237 ta 236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 975 - 1058
Alignment:
Q  16 atgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagg 99  Q
    ||||||| |||||||||||| |||||| |||||| |||||||||||| || ||  |||||||||||| ||||| | ||||||||    
T  975 atgcaaaggggctaattcttggggggccaaaattatagtttttgtacataagggaccaaaattgcaactttttaaaagttaagg 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 19594 - 19491
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||| ||| ||| |||||||||   ||||||||||||||| ||||||||| |||||||||||||| |||||| | |||||||||||||| |||||    
T  19594 agatgcaaaggggttaaatcttaggggatcaaaattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcac 19495  T
Q  114 ttta 117  Q
    ||||    
T  19494 ttta 19491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 5443 - 5536
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||| ||||  |||||||||||||||||||||| || | ||||||||||||||||||| | ||| ||||||||||||||||||||    
T  5443 gggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcacttta 5536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 4538 - 4445
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| | |||||||| |||||||||| |||||||||||| || || ||||||| |||||||||| | ||| ||||| ||| ||||||||||    
T  4538 gggctaaattttaggggggtaaaattgtaatttttgtacttaaggggctaaaattgtaagtttttgaaaattaggggggaaaatgtgcacttta 4445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 1545 - 1442
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    ||||||||||||||||| ||||||||||  |||||| |||||||| ||| ||||| | ||||||||||||||||| | |||||  ||||||||||| |||    
T  1545 agatgcaaatgggctaaatcttagggggtcaaaattatagtttttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacac 1446  T
Q  114 ttta 117  Q
    ||||    
T  1445 ttta 1442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 6449 - 6342
Alignment:
Q  14 agatgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 113  Q
    |||||||||  |||||| ||||||||||  ||||||||||||||||||| ||||| || ||||| | || ||||||| | ||||||| ||||||||||||    
T  6449 agatgcaaaaaggctaaatcttagggggtcaaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcac 6350  T
Q  114 tttaacct 121  Q
    ||||||||    
T  6349 tttaacct 6342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 9032 - 9123
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||| ||||||||| | ||||||||||||||||||| ||||  || |||||  ||| ||||||| | |||||| || ||||||||||||||    
T  9032 gggctaaatcttaggggcc-aaaattgtagtttttgtacataggaggcaaaaatcacaactttttga-aattaaggaggaaaaagtgcacttta 9123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 3306 - 3405
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||||||| ||||||||| | |||||| |||||||||||| || || | |||||||| |||||||||| || ||||||||||||||||||||||    
T  3306 tgcaaaggggctaaatcttaggggaccaaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaag-taaggggggaaaagtgcacttt 3404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 49431 - 49531
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| | ||||| ||||||||||  ||||||||||||||| |   ||||| ||||||||||||| ||||| | |||||||||| ||||||||||||||    
T  49431 tgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcacttt 49530  T
Q  117 a 117  Q
    |    
T  49531 a 49531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 2472 - 2562
Alignment:
Q  26 gctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaag-tttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||| || |||||||| ||||| || |||||||||||||||| | |||||||||||| ||||||| |||||  |||||||||||||||||||    
T  2472 gctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcacttta 2562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 7095 - 7185
Alignment:
Q  26 gctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaag-tttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||| || |||||||| ||||| || |||||||||||||||| | |||||||||||| ||||||| |||||  |||||||||||||||||||    
T  7095 gctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcacttta 7185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 49109 - 49182
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||||||||||  ||||||||  ||||||||||||||||||| | ||||||||| ||||||||||| ||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaattta 49182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 3770 - 3699
Alignment:
Q  25 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 96  Q
    |||||| ||||||||| |||||||| |||||| | |||| |||| ||||||||||||||||||||| |||||    
T  3770 ggctaaatcttaggggactaaaattatagtttctttactcagggggccaaaattgcaagtttttgaaagtta 3699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 4755 - 4827
Alignment:
Q  44 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||||||||| |||| |||||| |||||||||||| |||||| | |||| |||| || |||||||||||||    
T  4755 aaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagtt-agggagggaaagtgcacttta 4827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 37243 - 37179
Alignment:
Q  24 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagttttt 88  Q
    ||||||| || |||||||| |||||||| |||||||||||||||| | ||||||||||| |||||    
T  37243 gggctaaatcgtagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaattttt 37179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 23152 - 23084
Alignment:
Q  47 attgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||| ||||| |||||||| | | ||||||||||||||||||| |||||  |||||||||||||||||||    
T  23152 attgttgttttggtacttagagggacaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 23084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 23934 - 23988
Alignment:
Q  63 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||||||||||||||||||||||| ||||| || |  ||||||||||||||    
T  23934 ttagggagccaaaattgcaagtttttgaaagttagggagaaaaaagtgcacttta 23988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 135 - 217
Alignment:
Q  35 tagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    |||||||| |||||||| |||||  ||| | ||| |||||||| ||||  |||||| ||||| ||||||||||||||||||||    
T  135 tagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttta 217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 18820 - 18731
Alignment:
Q  28 taattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 117  Q
    ||||||||||| ||  ||||||||||||||||| | ||||  | |||||| |||| ||||| | ||||||| ||| ||||||||||||||    
T  18820 taattcttaggaggtcaaaattgtagtttttgttcataggaggtcaaaatcgcaactttttaaaagttaagagggaaaaagtgcacttta 18731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 19407 - 19513
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtactta-gggagccaaaattgcaagtttttgatagttaagggg-ggaaaagtgcact 114  Q
    |||||| ||||||||||||  ||| |||||||| || ||||||| | || |||| | ||| |||||| ||||||| |||||||||| | ||||||||| |    
T  19407 tgcaaaagggctaattcttgagggactaaaattataatttttgttcataggggatcaaaatttgcaactttttgaaagttaaggggagaaaaagtgcatt 19506  T
Q  115 ttaacct 121  Q
    |||||||    
T  19507 ttaacct 19513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 7413 - 7518
Alignment:
Q  17 tgcaaatgggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 116  Q
    |||||| ||||||| ||||||||||  ||||||||||||| ||||| ||||| | |||||| | || ||||| | | |||  |||||| |||||||||||    
T  7413 tgcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttagagggggacaagtgcacttt 7512  T
Q  117 aacctt 122  Q
    | ||||    
T  7513 agcctt 7518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University