View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2909_low_22 (Length: 235)
Name: NF2909_low_22
Description: NF2909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2909_low_22 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 42133834 - 42134046
Alignment:
| Q |
1 |
aggagtgagtaaattttctttccaactactttaagattttcatctcctatgcatgtattagctagaattgaatataattagttcatgaattagctagaat |
100 |
Q |
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| T |
42133834 |
aggagtgagtaaattttctttccaactactttaagattttcatctcctatgcatgtattagctagaattgaatataattagttcatgaattagctagaat |
42133933 |
T |
|
| Q |
101 |
tgaattacattcccagacttattattaaacagattgagcaagctgctgatcagtgatcataattgtaaccttgcgtctatggacattttctgttccattt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42133934 |
tgaattacattcccagacttattattaaacagattgagcaagctgctgatcagtgatcataattgtaaccttgcgtctatggacattttctgttccattt |
42134033 |
T |
|
| Q |
201 |
aattaaaggctat |
213 |
Q |
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||||||||||||| |
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| T |
42134034 |
aattaaaggctat |
42134046 |
T |
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