View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2909_low_8 (Length: 361)
Name: NF2909_low_8
Description: NF2909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2909_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 6 - 348
Target Start/End: Original strand, 41768591 - 41768933
Alignment:
| Q |
6 |
agcagcacagatcttaggcggaaacggcgtcgttcaccgatctgtagcttcatctctccgccttcgctccggcatgggtctccccgtcggcaaacactac |
105 |
Q |
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| T |
41768591 |
agcatcacaaatcttaggcggaaacggcgtcgttcaccgatctgtagcttcatctctccgccttcgctccggcatgggtctccccgtcggcaaacactac |
41768690 |
T |
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| Q |
106 |
gtccctaacaaacccgttcgtttctcttaacctaacctattcaattcaattttcttagaatcacgaaaattaacctcaattttcgaactctggtgatgtt |
205 |
Q |
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| T |
41768691 |
gtccctaacaaacccgttcgtttctcttaacctaacctattcaattcaattttcttagaatcacgaaaattaacctcaattttcgaattctggtgatgtt |
41768790 |
T |
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| Q |
206 |
ttttcagcttccgatgaatgaagaacttacatgggacaatggtactccatttcctgaaccttgtatagatcgcattgctgatactgttggaaaggtaact |
305 |
Q |
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| T |
41768791 |
ttttcagcttccgatgaatgaagaacttacatgggacaatggtactccatttcctgaaccttgtatagatcgcattgctgatactgttggaaaggtaact |
41768890 |
T |
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| Q |
306 |
acttttcaccatttaggatataattgttgtaatgtgaaatatg |
348 |
Q |
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| T |
41768891 |
acttttcaccatttaggatataagtgttgtaatgtgaaatatg |
41768933 |
T |
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