View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2910_high_5 (Length: 327)
Name: NF2910_high_5
Description: NF2910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2910_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 32816002 - 32815691
Alignment:
| Q |
1 |
acagttacacagtagtttcattcattctattccgtaacttcactatctcattctcagtaacgttcctctcagtcacatatcacatttctcaacctccatt |
100 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32816002 |
acagttacacagtagtttcattcattctattccgttacttcactatctaattctcagtaacgttcctctcagtcacatatcacatttctcaacctccatt |
32815903 |
T |
|
| Q |
101 |
cattttcttcggtttgttacaatatcttcttcttcatttaccataacttgttgtttaataaagacttattcatcattgacgtttccaattttacatgttt |
200 |
Q |
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||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
32815902 |
cattttctttggtttgttacgatatcttcttcttcatttaccataacttgttgtttaataaagacatattcatcattgacgtttccaattttacatgttt |
32815803 |
T |
|
| Q |
201 |
tagctcagaaatcatcatcaagtaaaaatggctaccaataacaacaatgaacaagaatcnnnnnnngcaactcattcttcttctactgctaaaattgagt |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
32815802 |
tagctcagaaatcatcatcaagtaaaaatggctaccaataacaacaatgaacaagaatcaaaaaaagcaactcattcttcttctactgctaaaattgagt |
32815703 |
T |
|
| Q |
301 |
tgcctccagttg |
312 |
Q |
| |
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|||||||||||| |
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|
| T |
32815702 |
tgcctccagttg |
32815691 |
T |
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