View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2910_high_8 (Length: 290)
Name: NF2910_high_8
Description: NF2910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2910_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 6 - 275
Target Start/End: Original strand, 41160037 - 41160306
Alignment:
| Q |
6 |
aggagcagagacagcttcaataaaggaatcaacaggagatgacacgtgtgatggactattagattctgtaatacttgactttgctttggtagattgaaac |
105 |
Q |
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| T |
41160037 |
aggagaagagacagcttcaataaaggaatcaacaggagatgacacgtgtgatggactattagattctgtaatacttgactttgctttggtagattgaaac |
41160136 |
T |
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| Q |
106 |
attacaacnnnnnnnnnnnnnnnnnnnnnnnngacttcataaaacatgtttgagttagaagaggccaatttcttcaccagaatctgaagttgttctctag |
205 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
41160137 |
attacaacgttgttgttgttgttgttttgttggacttcataaaacatgtttgagttagaagaggccaatttcttcaccagaatttgaagttgttctctag |
41160236 |
T |
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| Q |
206 |
cttggtctctttctttataagctatttcaagcatgttgagcaattcatccttcacattccttgtgttttc |
275 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41160237 |
cttggtctctttctttataagctatttcaagcatgttgagcaattcatccttcacattccttgtgttttc |
41160306 |
T |
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