View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2910_low_6 (Length: 329)
Name: NF2910_low_6
Description: NF2910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2910_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 26497432 - 26497737
Alignment:
| Q |
17 |
aaaataattgtgatgattttctagctaagccatgcaagaggcataatgcc--------taaattcacataatggatgttgttggcccttattaacaacaa |
108 |
Q |
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| T |
26497432 |
aaaataattgtgatgattttctagctaagccatgcaagaggcataatgccataatgcctaaattcacataatggatgttgttggcccttattaacaacaa |
26497531 |
T |
|
| Q |
109 |
attaacatttttctattccacatattataataatatactcacacttgtaccagtgccatgtggaccaaatcttacttcttaggaagcaattgtttgatga |
208 |
Q |
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|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26497532 |
attaacattttt-tataccacatattataataatatactcacacttgtaccagtgccatgtggaccaaatcttacttcttaggaagcaattgtttgatga |
26497630 |
T |
|
| Q |
209 |
tttaattaaataaaacaggattagttggctagttaattttatgctgaagaaaggttgtgttctttctaattctattatccattgaaggaacatataggaa |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26497631 |
tttaattaaataaaacaggattagttggctagttaattttatgctgaagaaaggttgtgttctttctaattctattatccattgaaggaacatataggaa |
26497730 |
T |
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| Q |
309 |
ttaaaag |
315 |
Q |
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||||||| |
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| T |
26497731 |
ttaaaag |
26497737 |
T |
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