View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2911-1-Insertion-12 (Length: 524)

Name: NF2911-1-Insertion-12
Description: NF2911-1
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2911-1-Insertion-12
NF2911-1-Insertion-12
[»] chr7 (1 HSPs)
chr7 (8-524)||(31820063-31820579)


Alignment Details
Target: chr7 (Bit Score: 405; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 8 - 524
Target Start/End: Complemental strand, 31820579 - 31820063
Alignment:
Q  8 taaatttcttaatttatatacaataacattcaacaaataaagaaagcatggagtatattgaacaacacttgaagacaggtgaatagttgccgattagata 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31820579 taaatttcttaatttatatacaataacattcaacaaataaagaaagcatggagtatattgaacaacacttgaagacaggtgaatagttgccgattagata 31820480  T
Q  108 tgcttcattgtaaacataacatatgacggatttagcaaactaaatacgactaggtgctatttttcaccctgccctcgttactgaagaagaactcatgctt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  31820479 tgcttcattgtaaacataacatatgacggatttagcaaactaaatacgactaggtgctatttttcaccctgccctcgttactga---agaactcatgctt 31820383  T
Q  208 taggaaatgcacttctaaatgacataaggttgttttaaatgtgtacataatattannnnnnncaacctaactagtgtatatgttttgtctttttatggac 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||| ||||||||||||||||||||    
T  31820382 taggaaatgcacttctaaatgacataaggttgttttaaatgtgtacataatatta-ttttttcaacataactagtgtatttgttttgtctttttatggac 31820284  T
Q  308 cgtgtgaaatgaattgaactcaattaaagtatgccgaatagtacaaatcatattgtatactccttgcccctcaaacaaactg----tatatactgttcat 403  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    ||||||||||||||    
T  31820283 cgtgtgaaatgaattgaacttaattaaagtatgccgaatagtacaaatcatattgtatattccttgcccctcaaacaaactgtatatatatactgttcat 31820184  T
Q  404 aataaatacagtttttatagtatgnnnnnnnnnnnnnggttgacaggtttacatagtattagtatgtattgtagaagttattttattcattttggaagaa 503  Q
    ||||||||||||||||||||||||             |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31820183 aataaatacagtttttatagtatgtttttctttttttggttgaaaggtttacatagtattagtatgtattgtagaagttattttattcattttggaagaa 31820084  T
Q  504 aaacacgaggatgcattatta 524  Q
    |||||||||||||||||||||    
T  31820083 aaacacgaggatgcattatta 31820063  T

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