View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2911-3-Insertion-5 (Length: 923)

Name: NF2911-3-Insertion-5
Description: NF2911-3
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2911-3-Insertion-5
NF2911-3-Insertion-5
[»] chr4 (67 HSPs)
chr4 (8-915)||(22186495-22187396)
chr4 (273-470)||(54576329-54576528)
chr4 (273-474)||(37761510-37761710)
chr4 (270-469)||(4437428-4437626)
chr4 (270-469)||(29993774-29993973)
chr4 (276-474)||(34995099-34995295)
chr4 (270-420)||(43961452-43961602)
chr4 (272-433)||(55080623-55080784)
chr4 (345-472)||(5825013-5825140)
chr4 (826-911)||(13691059-13691144)
chr4 (319-420)||(47846107-47846208)
chr4 (323-447)||(7977520-7977645)
chr4 (319-468)||(14539363-14539516)
chr4 (273-421)||(51329841-51329988)
chr4 (283-408)||(9030270-9030396)
chr4 (321-457)||(21694905-21695040)
chr4 (319-470)||(27735836-27735987)
chr4 (277-437)||(17182518-17182680)
chr4 (331-420)||(11089619-11089708)
chr4 (319-457)||(54001121-54001257)
chr4 (390-475)||(37711285-37711370)
chr4 (319-472)||(49735468-49735621)
chr4 (822-881)||(26645738-26645797)
chr4 (382-472)||(6938401-6938491)
chr4 (319-475)||(5730827-5730983)
chr4 (319-472)||(45741981-45742134)
chr4 (389-474)||(54935230-54935315)
chr4 (320-464)||(17938115-17938259)
chr4 (400-472)||(31348493-31348565)
chr4 (403-474)||(44145771-44145842)
chr4 (319-474)||(54320525-54320680)
chr4 (319-475)||(31348313-31348474)
chr4 (383-472)||(56135749-56135838)
chr4 (270-386)||(56135791-56135904)
chr4 (337-475)||(2247805-2247938)
chr4 (339-437)||(44145842-44145940)
chr4 (319-472)||(41174436-41174589)
chr4 (403-475)||(17182660-17182732)
chr4 (406-474)||(46007879-46007947)
chr4 (403-478)||(54935061-54935137)
chr4 (337-472)||(24565346-24565481)
chr4 (400-474)||(45132667-45132741)
chr4 (428-474)||(49735692-49735738)
chr4 (319-464)||(35248777-35248922)
chr4 (319-420)||(47433761-47433861)
chr4 (431-472)||(53260718-53260759)
chr4 (319-472)||(55510261-55510412)
chr4 (319-475)||(36151667-36151821)
chr4 (389-476)||(47694345-47694433)
chr4 (319-458)||(6891451-6891590)
chr4 (400-475)||(45741887-45741962)
chr4 (429-475)||(26166934-26166980)
chr4 (319-416)||(34108282-34108379)
chr4 (404-474)||(47433885-47433955)
chr4 (403-472)||(7977672-7977741)
chr4 (410-475)||(16400797-16400862)
chr4 (379-472)||(37761465-37761558)
chr4 (346-399)||(51075215-51075268)
chr4 (432-472)||(1968563-1968603)
chr4 (405-473)||(23332709-23332777)
chr4 (368-420)||(35543359-35543411)
chr4 (428-472)||(37711138-37711182)
chr4 (440-475)||(56135933-56135968)
chr4 (402-452)||(24565518-24565568)
chr4 (438-472)||(51329796-51329830)
chr4 (383-468)||(27735749-27735834)
chr4 (414-475)||(35565555-35565616)
[»] chr5 (54 HSPs)
chr5 (270-474)||(34980852-34981056)
chr5 (270-474)||(10204618-10204822)
chr5 (275-465)||(10043299-10043489)
chr5 (319-475)||(33744190-33744346)
chr5 (270-474)||(15986622-15986826)
chr5 (319-474)||(40305668-40305818)
chr5 (319-469)||(21581038-21581188)
chr5 (320-472)||(12035936-12036087)
chr5 (275-412)||(8551478-8551615)
chr5 (356-472)||(14245088-14245204)
chr5 (373-470)||(1657958-1658055)
chr5 (319-467)||(36363123-36363271)
chr5 (342-420)||(6597842-6597920)
chr5 (320-465)||(6382419-6382564)
chr5 (270-387)||(5688455-5688572)
chr5 (319-475)||(7544227-7544383)
chr5 (319-475)||(10043007-10043162)
chr5 (319-471)||(13634802-13634954)
chr5 (357-475)||(2183943-2184061)
chr5 (337-475)||(11437048-11437189)
chr5 (319-474)||(28279474-28279629)
chr5 (319-472)||(8502835-8502988)
chr5 (319-472)||(16938570-16938723)
chr5 (400-472)||(7544136-7544208)
chr5 (404-472)||(10204576-10204644)
chr5 (400-472)||(13634711-13634783)
chr5 (389-472)||(15986785-15986868)
chr5 (429-475)||(10476229-10476275)
chr5 (394-472)||(11436939-11437017)
chr5 (403-472)||(40305840-40305909)
chr5 (400-472)||(26414893-26414965)
chr5 (399-474)||(14245217-14245292)
chr5 (399-469)||(11757074-11757144)
chr5 (383-473)||(14684639-14684729)
chr5 (428-474)||(16938477-16938523)
chr5 (400-476)||(4373738-4373814)
chr5 (409-468)||(2550533-2550592)
chr5 (427-474)||(5688589-5688636)
chr5 (403-470)||(8551593-8551660)
chr5 (390-452)||(10043272-10043334)
chr5 (384-470)||(10650429-10650517)
chr5 (432-477)||(20147074-20147119)
chr5 (403-472)||(33744368-33744437)
chr5 (433-477)||(10650619-10650663)
chr5 (404-472)||(40815297-40815365)
chr5 (337-420)||(13839780-13839863)
chr5 (403-474)||(15858915-15858986)
chr5 (425-472)||(18199528-18199575)
chr5 (403-470)||(34980812-34980879)
chr5 (319-421)||(9856971-9857073)
chr5 (440-474)||(22023571-22023605)
chr5 (384-475)||(35176815-35176908)
chr5 (320-369)||(14684585-14684634)
chr5 (319-420)||(16501842-16501943)
[»] chr7 (59 HSPs)
chr7 (272-474)||(48881556-48881759)
chr7 (320-472)||(28074103-28074255)
chr7 (270-474)||(33519090-33519294)
chr7 (270-474)||(36267551-36267755)
chr7 (270-451)||(37925883-37926064)
chr7 (279-462)||(35422015-35422198)
chr7 (273-466)||(37620819-37621012)
chr7 (319-437)||(39646560-39646678)
chr7 (320-472)||(48015299-48015451)
chr7 (326-472)||(30592253-30592399)
chr7 (319-437)||(21857438-21857555)
chr7 (319-478)||(16833786-16833948)
chr7 (319-474)||(40196530-40196685)
chr7 (319-474)||(41496955-41497110)
chr7 (319-446)||(2087765-2087896)
chr7 (337-472)||(18231695-18231830)
chr7 (331-447)||(31364070-31364183)
chr7 (319-464)||(3215870-3216013)
chr7 (378-472)||(33519048-33519142)
chr7 (319-472)||(4833531-4833684)
chr7 (284-437)||(48013558-48013712)
chr7 (390-479)||(8122137-8122226)
chr7 (383-472)||(37925841-37925930)
chr7 (400-472)||(39856037-39856109)
chr7 (319-419)||(3143571-3143675)
chr7 (390-476)||(13770944-13771030)
chr7 (404-472)||(36267729-36267797)
chr7 (405-477)||(39646464-39646536)
chr7 (319-433)||(23116298-23116413)
chr7 (319-402)||(8122235-8122322)
chr7 (403-472)||(1051673-1051742)
chr7 (319-420)||(33655160-33655261)
chr7 (320-380)||(12670928-12670988)
chr7 (383-471)||(31571625-31571713)
chr7 (337-472)||(10315742-10315877)
chr7 (373-475)||(31553182-31553281)
chr7 (319-469)||(34235010-34235160)
chr7 (405-475)||(47390852-47390922)
chr7 (319-437)||(48093984-48094102)
chr7 (391-472)||(47391019-47391100)
chr7 (383-474)||(18795750-18795840)
chr7 (427-474)||(25887190-25887237)
chr7 (319-472)||(25887283-25887436)
chr7 (405-475)||(33655285-33655355)
chr7 (383-472)||(13771101-13771190)
chr7 (319-472)||(24970167-24970318)
chr7 (401-474)||(34228492-34228565)
chr7 (319-415)||(22163167-22163262)
chr7 (319-415)||(22221875-22221970)
chr7 (437-477)||(41008387-41008427)
chr7 (401-472)||(4835479-4835550)
chr7 (340-403)||(7791831-7791894)
chr7 (383-470)||(37620776-37620863)
chr7 (382-469)||(42306484-42306571)
chr7 (375-472)||(12670532-12670630)
chr7 (319-437)||(17852962-17853079)
chr7 (428-474)||(28074308-28074354)
chr7 (428-474)||(40282195-40282241)
chr7 (425-470)||(23116425-23116470)
[»] chr8 (51 HSPs)
chr8 (270-474)||(8815139-8815343)
chr8 (319-474)||(43732778-43732933)
chr8 (270-474)||(12022140-12022345)
chr8 (273-472)||(30365175-30365374)
chr8 (320-469)||(16024246-16024394)
chr8 (272-475)||(40632993-40633189)
chr8 (320-474)||(34196402-34196553)
chr8 (319-452)||(6453275-6453408)
chr8 (340-468)||(29937614-29937742)
chr8 (319-420)||(20472744-20472845)
chr8 (279-415)||(8671849-8671987)
chr8 (319-437)||(9933332-9933450)
chr8 (275-472)||(39449351-39449543)
chr8 (321-474)||(31738516-31738669)
chr8 (383-472)||(12022298-12022387)
chr8 (320-472)||(24243050-24243199)
chr8 (321-410)||(9434360-9434450)
chr8 (273-396)||(43826377-43826500)
chr8 (383-472)||(43732679-43732768)
chr8 (319-472)||(31543072-31543225)
chr8 (400-477)||(31543244-31543321)
chr8 (402-474)||(2248450-2248522)
chr8 (319-472)||(41103504-41103659)
chr8 (383-470)||(16024155-16024242)
chr8 (390-481)||(34634305-34634396)
chr8 (383-472)||(8815296-8815385)
chr8 (337-474)||(11785635-11785772)
chr8 (319-468)||(30479721-30479870)
chr8 (400-472)||(1027020-1027092)
chr8 (319-466)||(36308934-36309081)
chr8 (319-469)||(16653040-16653190)
chr8 (403-468)||(7394636-7394701)
chr8 (435-475)||(3726860-3726900)
chr8 (400-448)||(30581985-30582033)
chr8 (383-474)||(2481934-2482019)
chr8 (400-466)||(1281149-1281215)
chr8 (407-472)||(13404976-13405041)
chr8 (320-369)||(27483652-27483701)
chr8 (390-475)||(30365127-30365212)
chr8 (322-442)||(1281237-1281357)
chr8 (404-476)||(8671970-8672042)
chr8 (400-475)||(7979137-7979212)
chr8 (337-420)||(9718531-9718614)
chr8 (405-472)||(9718656-9718723)
chr8 (319-366)||(26167847-26167894)
chr8 (319-414)||(30664452-30664547)
chr8 (432-474)||(2412962-2413004)
chr8 (405-475)||(7503131-7503201)
chr8 (403-469)||(20472867-20472933)
chr8 (319-464)||(11575415-11575559)
chr8 (319-420)||(28083833-28083934)
[»] chr3 (55 HSPs)
chr3 (270-472)||(34641034-34641234)
chr3 (273-475)||(24253767-24253969)
chr3 (275-475)||(26135844-26136044)
chr3 (270-475)||(10943611-10943816)
chr3 (270-472)||(8432261-8432461)
chr3 (319-475)||(44412452-44412608)
chr3 (270-420)||(40858607-40858757)
chr3 (341-468)||(55428492-55428619)
chr3 (319-410)||(42772123-42772214)
chr3 (319-420)||(17474258-17474359)
chr3 (270-416)||(41414120-41414266)
chr3 (275-420)||(48683659-48683805)
chr3 (319-478)||(36727268-36727425)
chr3 (270-395)||(46978469-46978594)
chr3 (320-420)||(18086032-18086133)
chr3 (319-415)||(42699669-42699765)
chr3 (319-414)||(21090129-21090224)
chr3 (275-472)||(16883974-16884168)
chr3 (319-475)||(41110318-41110474)
chr3 (319-474)||(24560308-24560463)
chr3 (400-477)||(220569-220646)
chr3 (319-475)||(18654597-18654753)
chr3 (355-420)||(54985745-54985810)
chr3 (319-470)||(16275707-16275858)
chr3 (400-476)||(28582681-28582757)
chr3 (404-470)||(42772046-42772112)
chr3 (403-472)||(44412361-44412430)
chr3 (405-469)||(21090248-21090312)
chr3 (390-470)||(23028088-23028168)
chr3 (400-472)||(24560217-24560289)
chr3 (319-387)||(27197734-27197802)
chr3 (337-477)||(41039945-41040085)
chr3 (319-474)||(36568902-36569056)
chr3 (405-472)||(41414078-41414145)
chr3 (319-474)||(25654969-25655125)
chr3 (355-468)||(10748299-10748407)
chr3 (383-472)||(14898135-14898224)
chr3 (319-420)||(40463923-40464024)
chr3 (400-472)||(25655144-25655216)
chr3 (404-475)||(5961945-5962015)
chr3 (404-467)||(14897981-14898044)
chr3 (407-474)||(25499074-25499141)
chr3 (319-466)||(27541937-27542084)
chr3 (400-472)||(30200263-30200339)
chr3 (337-416)||(45663202-45663279)
chr3 (391-437)||(1816051-1816097)
chr3 (440-474)||(30200096-30200130)
chr3 (319-420)||(220449-220550)
chr3 (403-468)||(17474381-17474446)
chr3 (431-472)||(24253721-24253762)
chr3 (428-469)||(28581189-28581230)
chr3 (440-477)||(37102154-37102191)
chr3 (437-474)||(37102348-37102385)
chr3 (376-437)||(42699761-42699821)
chr3 (437-474)||(42772231-42772268)
[»] chr1 (49 HSPs)
chr1 (275-472)||(1085489-1085687)
chr1 (340-468)||(35512909-35513037)
chr1 (319-474)||(40709290-40709445)
chr1 (319-464)||(25268355-25268500)
chr1 (319-472)||(51303384-51303537)
chr1 (319-470)||(2506630-2506781)
chr1 (320-472)||(20607311-20607461)
chr1 (319-433)||(47071142-47071256)
chr1 (273-437)||(525137-525299)
chr1 (319-475)||(35927904-35928059)
chr1 (275-420)||(1344596-1344740)
chr1 (275-420)||(33643315-33643460)
chr1 (337-476)||(41498513-41498653)
chr1 (319-475)||(38509891-38510047)
chr1 (319-474)||(40094931-40095086)
chr1 (320-417)||(40287311-40287407)
chr1 (320-420)||(13386971-13387071)
chr1 (400-474)||(30010330-30010404)
chr1 (403-476)||(1085665-1085738)
chr1 (319-472)||(30010423-30010576)
chr1 (275-420)||(52707692-52707837)
chr1 (319-473)||(2858931-2859085)
chr1 (382-475)||(12234164-12234257)
chr1 (337-469)||(7444604-7444736)
chr1 (320-468)||(8529891-8530039)
chr1 (400-472)||(12234010-12234082)
chr1 (400-475)||(32951490-32951565)
chr1 (400-476)||(35349634-35349710)
chr1 (403-474)||(33643266-33643337)
chr1 (405-472)||(35927814-35927881)
chr1 (428-472)||(26324014-26324058)
chr1 (319-383)||(50079473-50079537)
chr1 (399-474)||(20576131-20576206)
chr1 (319-472)||(35349466-35349615)
chr1 (405-472)||(41498404-41498471)
chr1 (340-472)||(47261381-47261515)
chr1 (438-476)||(2470726-2470764)
chr1 (400-465)||(2859104-2859169)
chr1 (400-469)||(38510066-38510135)
chr1 (319-380)||(44210997-44211058)
chr1 (321-385)||(17622630-17622694)
chr1 (319-415)||(49946645-49946741)
chr1 (319-402)||(42230629-42230712)
chr1 (400-474)||(7444476-7444550)
chr1 (403-477)||(17622531-17622605)
chr1 (432-474)||(20607221-20607263)
chr1 (437-474)||(26941042-26941079)
chr1 (319-376)||(42742406-42742463)
chr1 (319-452)||(51597759-51597892)
[»] chr2 (57 HSPs)
chr2 (275-475)||(45257354-45257554)
chr2 (270-466)||(31061401-31061598)
chr2 (320-472)||(42813712-42813864)
chr2 (319-476)||(15085695-15085853)
chr2 (272-410)||(34187619-34187759)
chr2 (273-474)||(2380990-2381186)
chr2 (275-418)||(3094407-3094550)
chr2 (359-475)||(22356134-22356251)
chr2 (270-452)||(42296323-42296505)
chr2 (319-469)||(31795772-31795922)
chr2 (277-414)||(45098218-45098355)
chr2 (319-472)||(23748186-23748339)
chr2 (319-435)||(33265697-33265813)
chr2 (319-437)||(36052122-36052241)
chr2 (320-452)||(1052774-1052907)
chr2 (319-420)||(21502124-21502225)
chr2 (319-420)||(35325360-35325461)
chr2 (324-476)||(9313079-9313236)
chr2 (339-472)||(35736302-35736431)
chr2 (330-421)||(8554350-8554441)
chr2 (355-474)||(16713652-16713771)
chr2 (320-395)||(31928121-31928196)
chr2 (389-472)||(45257307-45257390)
chr2 (400-477)||(35736170-35736247)
chr2 (319-472)||(36347541-36347694)
chr2 (337-474)||(887225-887355)
chr2 (337-471)||(36046205-36046339)
chr2 (400-474)||(36347713-36347787)
chr2 (320-472)||(9631652-9631804)
chr2 (403-475)||(42296478-42296550)
chr2 (389-472)||(31061359-31061442)
chr2 (404-470)||(3094529-3094595)
chr2 (319-470)||(8426881-8427024)
chr2 (402-472)||(15224868-15224938)
chr2 (428-474)||(17379844-17379890)
chr2 (383-472)||(1270433-1270522)
chr2 (423-475)||(8554446-8554498)
chr2 (319-470)||(40022461-40022615)
chr2 (321-420)||(15224746-15224845)
chr2 (411-474)||(17333995-17334058)
chr2 (383-465)||(31928204-31928286)
chr2 (400-470)||(36046374-36046443)
chr2 (337-448)||(36566874-36566986)
chr2 (383-471)||(1052911-1053000)
chr2 (429-474)||(15224143-15224188)
chr2 (403-464)||(33265615-33265676)
chr2 (403-472)||(34187575-34187644)
chr2 (383-472)||(41778773-41778862)
chr2 (434-469)||(6721675-6721710)
chr2 (382-437)||(14196823-14196878)
chr2 (383-452)||(886938-887005)
chr2 (428-470)||(9426987-9427029)
chr2 (430-472)||(17380043-17380085)
chr2 (319-437)||(39732764-39732882)
chr2 (372-437)||(1583221-1583286)
chr2 (387-472)||(17331415-17331500)
chr2 (270-311)||(31928210-31928251)
[»] chr6 (44 HSPs)
chr6 (319-469)||(26318396-26318546)
chr6 (319-472)||(3841176-3841330)
chr6 (319-469)||(25468403-25468552)
chr6 (320-474)||(9051532-9051686)
chr6 (334-464)||(10293354-10293484)
chr6 (319-472)||(4097235-4097388)
chr6 (321-475)||(31799014-31799174)
chr6 (822-915)||(9587819-9587912)
chr6 (275-409)||(15323272-15323406)
chr6 (275-409)||(15353411-15353544)
chr6 (332-452)||(34176591-34176711)
chr6 (337-471)||(10818325-10818459)
chr6 (319-472)||(30487306-30487458)
chr6 (327-403)||(15373668-15373744)
chr6 (378-475)||(15353361-15353458)
chr6 (337-469)||(9719034-9719166)
chr6 (391-464)||(23091121-23091195)
chr6 (319-437)||(31849201-31849319)
chr6 (393-474)||(4097678-4097759)
chr6 (390-475)||(15323222-15323307)
chr6 (337-477)||(9721133-9721273)
chr6 (319-474)||(14515562-14515717)
chr6 (319-471)||(16737997-16738149)
chr6 (319-420)||(29692969-29693078)
chr6 (389-472)||(23090995-23091078)
chr6 (400-469)||(19278210-19278278)
chr6 (324-420)||(28477076-28477181)
chr6 (400-472)||(14515473-14515545)
chr6 (393-472)||(10818229-10818308)
chr6 (337-472)||(33236060-33236194)
chr6 (319-472)||(665841-665994)
chr6 (322-472)||(1300714-1300864)
chr6 (428-474)||(9298691-9298737)
chr6 (337-438)||(30849948-30850047)
chr6 (405-474)||(12811157-12811226)
chr6 (390-467)||(19278039-19278116)
chr6 (355-475)||(1390446-1390566)
chr6 (319-415)||(4097569-4097665)
chr6 (403-474)||(31798916-31798987)
chr6 (430-472)||(9051734-9051776)
chr6 (400-469)||(2892775-2892844)
chr6 (382-471)||(9719184-9719273)
chr6 (390-475)||(10293247-10293332)
chr6 (438-475)||(33041662-33041699)
[»] scaffold0007 (1 HSPs)
scaffold0007 (319-473)||(242307-242461)
[»] scaffold0012 (1 HSPs)
scaffold0012 (320-468)||(184698-184847)
[»] scaffold0240 (1 HSPs)
scaffold0240 (329-472)||(17641-17782)
[»] scaffold0026 (3 HSPs)
scaffold0026 (320-466)||(1403-1549)
scaffold0026 (384-472)||(1554-1642)
scaffold0026 (400-469)||(1175-1244)
[»] scaffold0119 (3 HSPs)
scaffold0119 (270-420)||(37425-37575)
scaffold0119 (383-472)||(30715-30804)
scaffold0119 (383-472)||(37383-37472)
[»] scaffold0071 (1 HSPs)
scaffold0071 (320-420)||(52977-53077)
[»] scaffold0095 (1 HSPs)
scaffold0095 (275-438)||(8194-8357)
[»] scaffold0067 (2 HSPs)
scaffold0067 (339-475)||(39183-39320)
scaffold0067 (400-477)||(39362-39439)
[»] scaffold1414 (1 HSPs)
scaffold1414 (329-416)||(402-490)
[»] scaffold0262 (1 HSPs)
scaffold0262 (319-472)||(16296-16449)
[»] scaffold0198 (1 HSPs)
scaffold0198 (384-469)||(3150-3235)
[»] scaffold0096 (1 HSPs)
scaffold0096 (404-475)||(6581-6652)
[»] scaffold0036 (1 HSPs)
scaffold0036 (337-370)||(37913-37946)
[»] scaffold0027 (1 HSPs)
scaffold0027 (389-470)||(121987-122067)


Alignment Details
Target: chr4 (Bit Score: 660; Significance: 0; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 660; E-Value: 0
Query Start/End: Original strand, 8 - 915
Target Start/End: Original strand, 22186495 - 22187396
Alignment:
Q  8 taatctattgaccttttgcctgagaaacatttgttcctgctcaaaagcaaatgataccatttactattttggttttgactgatatnnnnnnnnntattgg 107  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||         ||||||    
T  22186495 taatctattgatcttttgcctgagaaatatttgttcctgctcaaaagcaaatgataccatttactattttggttttcattgatataaaaaaaa-tattgg 22186593  T
Q  108 catgtattgaatttatttaagtataatatgaaattacaccatactaaagctaaatatatgagaaaaacttatgagaaattatgttgctttgagttattca 207  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22186594 catgtattgaatttatttaaatataatatgaaattacaccatagtaaagctaaatatatgagaaaaacttatgagaaattatgttgctttgagttattca 22186693  T
Q  208 atgcaaagacaggaatgatacatttaggatgtatttggattgagggtttaagaannnnnnnnaggg-----ttcacttttaatttttatattacaaacaa 302  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||| |||        ||||     ||||||||||||||||| |||||||||||    
T  22186694 atgcaaagacaggaatgatatatttagggtgtatttggattgagggtttaggaagggaagggagggcagagttcacttttaatttttaaattacaaacaa 22186793  T
Q  303 cgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtc 402  Q
    |||||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22186794 cgtaaaatgtttttttaaaataaataaagtgtttttgaagtattatataatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtc 22186893  T
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaatgagaaggctacaaagagtttattctc 502  Q
    |||||||||||||||||| ||||||||||||||   ||       ||||| ||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  22186894 cgtaatttaaaaaagaaaagtgagtcctcccct---tt-------taaaccctccatccaaacacactttaaatgaggaggctacaaagagtttattctc 22186983  T
Q  503 attgtaactgatgttgctcttgttgcaggcttacatggtttttcaaatatatcttgttctttttatcagtacatggtattgtgttaaaaaccactccaag 602  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22186984 attgtaactgatgttgctcttgttgcaggcttacatggtttttcaaatatatcttgttctttttatcagtacatggtattgtgttaaaaaccactccaag 22187083  T
Q  603 aaaaattgaataatttgtattatcagatatatttcaatgaattttatgatctgatttcttttttatatatcttgcactataggactaccttcgagaaatt 702  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  22187084 aaaaattgaataatttgtattatcagatatatttcaatgaattttatgatctaatttcttttttatatattttgcactataggactaccttcgagaaatt 22187183  T
Q  703 gctaatctgattgaacttttcgattatgagccaggctttgggagaaacaaaagagtgcgttgtgtctctttccctattcctttgattggattaattaatt 802  Q
     |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  22187184 cctaatctgattgaacttttcggatatgagccaggctttgggagaaacaaaagagtgtgttgtgtctatttccctattcctttgattggattaattaatt 22187283  T
Q  803 gatcgtgtgtctctttatttctctggccgagttatggtgaggtaaattaagcgaccaataagcctatgatagcgtggaggatcaggatatggagagcctg 902  Q
    ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||    
T  22187284 gagtgtgtgtctctttatttctctggccgagttatggtgaggtaaattaagcgaccaataagcctacgatagcgtggaggatcaggatatggagggcttg 22187383  T
Q  903 aatcaagagcaag 915  Q
    |||||||||||||    
T  22187384 aatcaagagcaag 22187396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 273 - 470
Target Start/End: Complemental strand, 54576528 - 54576329
Alignment:
Q  273 gttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnna--aaataaataaagtgtttttgaagtattatataattatttatcatgttgtta 370  Q
    |||||||||||||||||| ||||| ||||||||||||||          |||||||| || |||||||||||||||||||||| |||||||| |||||||    
T  54576528 gttcacttttaatttttaaattacgaacaacgtaaaatgttttttttttaaataaattaaatgtttttgaagtattatataatcatttatcacgttgtta 54576429  T
Q  371 atttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    ||| ||||||||| |||||||||||||||||||||||| ||||||||||| || || |||||||||||||||||| |||||| |||||||||||||||||    
T  54576428 attcaattttctataaatcattttataatgtccgtaatctaaaaaagaaaagtaagccctcccctcccttccccttctaaaccctccatccaaacacacc 54576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 273 - 474
Target Start/End: Original strand, 37761510 - 37761710
Alignment:
Q  273 gttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaat 372  Q
    |||||||||||||||||| ||||| |||||| ||||||        | ||||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  37761510 gttcacttttaatttttaaattacgaacaacataaaat-attttttagaataaattaagtgtttttgaagtgttatataatcatttatcatgttgttaat 37761608  T
Q  373 ttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    | ||||||||||||||||||| ||||||||| |||||||||||||||| |  || ||||||||||||||||||  ||||  |||||||||||||||||||    
T  37761609 tcaattttctaaaaatcatttcataatgtccataatttaaaaaagaaaaggaagccctcccctcccttccccttttaaatcctccatccaaacacaccct 37761708  T
Q  473 aa 474  Q
    ||    
T  37761709 aa 37761710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 270 - 469
Target Start/End: Complemental strand, 4437626 - 4437428
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||||||| ||||| |||||| |||| |||||| ||||||||       ||||||||| |||||||||||||||||||||| || | |||||||||||||    
T  4437626 agggttcatttttattttttaaattaaaaacaatgtaaaatgttttta-aaaataaatcaagtgtttttgaagtattatatgatcaattatcatgttgtt 4437528  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    |||| |||||| |||||||||||||||||| ||| ||||||||||||||||  | |||| ||||||||||| || |||||||| ||||||||||||||||    
T  4437527 aattcaattttttaaaaatcattttataatatccataatttaaaaaagaaaaataagtcatcccctccctttccatcctaaaccctccatccaaacacac 4437428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 270 - 469
Target Start/End: Complemental strand, 29993973 - 29993774
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||||||||||||| |||||| ||||| ||||| |||||| |       |||||| || |||| ||||||||||||||||| || ||  |||||||||||    
T  29993973 agggttcacttttactttttaaattacgaacaatgtaaaaagtttttttaaaatagattaagtatttttgaagtattatatcatcatcaatcatgttgtt 29993874  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||   ||||||||| ||| ||||||||||||||| ||  ||||||||||||    
T  29993873 aattcaattttctaaaaatcattttatagtgtccgtaatttaaaaaagaaaaacgagtcctccactcacttcccctcctaaacccttaatccaaacacac 29993774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 276 - 474
Target Start/End: Original strand, 34995099 - 34995295
Alignment:
Q  276 cacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaattta 375  Q
    |||||||| |||||| ||||| ||||| || |||||       ||||||||| |||||||||||||||||||||  |||||||||||||||  ||||| |    
T  34995099 cacttttattttttaaattacgaacaatgtgaaatgtttttctaaaataaattaagtgtttttgaagtattataagattatttatcatgtt--taattca 34995196  T
Q  376 attttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| || |||| | ||||| |||||| |||||||| ||| ||| |||||||||||||    
T  34995197 attttctaaaaatcatttgataatatccgtaatttaaaaaagaaaagtaagtcttaccctcacttcccttcctaaaccctcaatctaaacacaccctaa 34995295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 270 - 420
Target Start/End: Original strand, 43961452 - 43961602
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||| ||||||||| |||||| ||||  ||||| ||||||||       ||||||||| |||||||||||||||||||||| || ||||||||||||| |    
T  43961452 agggctcacttttattttttaaattatgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgat 43961551  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||||    
T  43961552 aattcaattttctaaaaatcattttataatgttcataatttaaaaaagaaa 43961602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 272 - 433
Target Start/End: Original strand, 55080623 - 55080784
Alignment:
Q  272 ggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaa 371  Q
    |||||| ||||| ||| || ||||| ||||| ||||||||       ||||||| | |||||||||||||||||| ||| || |||||||||||||||||    
T  55080623 ggttcatttttattttgtaaattacgaacaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaa 55080722  T
Q  372 tttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctccc 433  Q
    || |||||||||||||| |||||||||||| |||||||||||||||||| || |||||||||    
T  55080723 ttaaattttctaaaaattattttataatgttcgtaatttaaaaaagaaaagtaagtcctccc 55080784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 345 - 472
Target Start/End: Original strand, 5825013 - 5825140
Alignment:
Q  345 ttatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccc 444  Q
    |||||| || ||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||| || | ||||| || | ||||| |    
T  5825013 ttatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtctgtaattcaaaaaagaaaagtaaatcctctccccacttcctc 5825112  T
Q  445 tcctaaactctccatccaaacacaccct 472  Q
    |||||||| |||||||||||||||||||    
T  5825113 tcctaaaccctccatccaaacacaccct 5825140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 826 - 911
Target Start/End: Complemental strand, 13691144 - 13691059
Alignment:
Q  826 tggccgagttatggtgaggtaaattaagcgaccaataagcctatgatagcgtggaggatcaggatatggagagcctgaatcaagag 911  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  13691144 tggccgagttatggtgaggtaaattaagcgaccaataagtctatgatagggtggaggatcaggatatggagggcctgaatcaagag 13691059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 319 - 420
Target Start/End: Complemental strand, 47846208 - 47846107
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||| |||||| ||||||| ||||||||||||||  |||||||||||||    
T  47846208 aaaataaattaagtgtttttgaagtattatatgattatttatcatgttcttaattcaattttgtaaaaattattttataatgtccagaatttaaaaaaga 47846109  T
Q  419 aa 420  Q
    ||    
T  47846108 aa 47846107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 323 - 447
Target Start/End: Complemental strand, 7977645 - 7977520
Alignment:
Q  323 taaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaa-aaaagaaag 421  Q
    ||||| || ||||||||||||||||||| || ||||||||||||||||||| ||||||| ||| || |||||||||||| |||||||||| ||||||||     
T  7977645 taaattaattgtttttgaagtattatatgatcatttatcatgttgttaattcaattttcaaaatattattttataatgttcgtaatttaaaaaaagaaaa 7977546  T
Q  422 gtgagtcctcccctcccttcccctcc 447  Q
    || || ||||||||||||| ||||||    
T  7977545 gtaagccctcccctccctttccctcc 7977520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 14539363 - 14539516
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaattta----aaa 414  Q
    ||||||||| |||||||||||||||||||||| || |||||| ||||| ||||||||||||||||| || ||||||||||||| |||||||||    |||    
T  14539363 aaaataaattaagtgtttttgaagtattatatgatcatttattatgttcttaatttaattttctaacaaacattttataatgttcgtaatttataaaaaa 14539462  T
Q  415 aagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacaca 468  Q
    || ||| || | ||||||  || ||||||||| ||||| ||| |||||||||||    
T  14539463 aaaaaaagtaaatcctcctgtctcttcccctcttaaaccctcaatccaaacaca 14539516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 273 - 421
Target Start/End: Original strand, 51329841 - 51329988
Alignment:
Q  273 gttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaat 372  Q
    ||||| |||||||||||| ||||| ||||||  ||||||       ||||||||| |||| |||||||||||||||||||| ||||||||| ||||||||    
T  51329841 gttcaattttaatttttaaattacgaacaacacaaaatgtttttttaaaataaattaagt-tttttgaagtattatataatcatttatcattttgttaat 51329939  T
Q  373 ttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaag 421  Q
    | ||||||||| |||| |||||||||| ||| |||||||||||| ||||    
T  51329940 tcaattttctataaattattttataatatccctaatttaaaaaaaaaag 51329988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 283 - 408
Target Start/End: Original strand, 9030270 - 9030396
Alignment:
Q  283 aatttttatattacaaacaacgtaaaatgnnnnnnnaa-aataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttc 381  Q
    |||||||| ||||| ||||||||||||||       || ||||||| |||||||||| |||||||||||||| ||||||||| || |||||| |||||||    
T  9030270 aatttttaaattacgaacaacgtaaaatgttttttaaacaataaattaagtgtttttaaagtattatataatcatttatcattttattaattaaattttc 9030369  T
Q  382 taaaaatcattttataatgtccgtaat 408  Q
    ||||||||||||||||||||| |||||    
T  9030370 taaaaatcattttataatgtctgtaat 9030396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 321 - 457
Target Start/End: Complemental strand, 21695040 - 21694905
Alignment:
Q  321 aataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
    ||||||| ||||||  |||||||||||||| || ||| ||||| |||||| || |||||  |||||| ||||||||| ||||||||||||||||||||||    
T  21695040 aataaattaagtgtgattgaagtattatatgatcatt-atcattttgttatttcaatttattaaaaaccattttatagtgtccgtaatttaaaaaagaaa 21694942  T
Q  421 ggtgagtcctcccctcccttcccctcctaaactctcc 457  Q
     || || |||||| |||||||||||||||||| ||||    
T  21694941 agtaagccctcccgtcccttcccctcctaaaccctcc 21694905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 319 - 470
Target Start/End: Original strand, 27735836 - 27735987
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| || ||||||||||||  ||   ||| | | |||||| ||||||||| ||||||||||||||||| ||    
T  27735836 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttaatatgctaactctttaaaaaacattttatagtgtccgtaatttaaaaatga 27735935  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    ||  |||  |||  |||||||||||||||||||| |||||||||||||||||    
T  27735936 aaaatgaaccctatcctcccttcccctcctaaaccctccatccaaacacacc 27735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 277 - 437
Target Start/End: Complemental strand, 17182680 - 17182518
Alignment:
Q  277 acttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaa 376  Q
    ||||||| |||||| ||||| ||||| |||||||        ||||||||| |||||||||||||||||||||| || ||||||||| ||||||||| ||    
T  17182680 acttttattttttaaattacgaacaaggtaaaatatttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatattgttaattcaa 17182581  T
Q  377 tttt--ctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcc 437  Q
    ||||  | |||||||||||||||| |||  |||||||||||||||| || | || ||||||||    
T  17182580 tttttgcaaaaaatcattttataacgtcaataatttaaaaaagaaaagtaaatcttcccctcc 17182518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 420
Target Start/End: Original strand, 11089619 - 11089708
Alignment:
Q  331 gtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
    |||||||||||||| ||||| || |||||| |||||||||||| |||||||||||||  ||||||||| |||||||||||||||||||||    
T  11089619 gtgtttttgaagtaatatatgatcatttatgatgttgttaattcaattttctaaaaaatattttataaagtccgtaatttaaaaaagaaa 11089708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 319 - 457
Target Start/End: Complemental strand, 54001257 - 54001121
Alignment:
Q  319 aaaataaataaa-gtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaag 417  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||||   |||| |||||| ||||||| |||||||||||||||||||||||||||     
T  54001257 aaaataaataaaagtgtttttgaagtattatatgatcatttatcatgtt---aattcaattttttaaaaattattttataatgtccgtaatttaaaaaac 54001161  T
Q  418 aaaggtgagtcctcccctcccttcccctcctaaactctcc 457  Q
    ||| || ||  |||| || |||| | ||||||||| ||||    
T  54001160 aaaagtaagctctccacttcctttctctcctaaaccctcc 54001121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 390 - 475
Target Start/End: Original strand, 37711285 - 37711370
Alignment:
Q  390 attttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||||||| ||||||||||||||||| ||||  | |  ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37711285 attttatagtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccctaaa 37711370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 319 - 472
Target Start/End: Complemental strand, 49735621 - 49735468
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  | ||| |||||||| ||  |||||||||||  ||  |||| ||| |||||  ||||| ||  ||||||||||||||||| ||    
T  49735621 aaaataaatcaagtgtgatagaaatattatattatcgtttatcatgttaataggttaactttttaaaagacatttcatgttgtccgtaatttaaaaatga 49735522  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || ||||  ||||||||||||||||||||||||| ||| |||||||||||||||    
T  49735521 aaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 49735468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 822 - 881
Target Start/End: Original strand, 26645738 - 26645797
Alignment:
Q  822 tctctggccgagttatggtgaggtaaattaagcgaccaataagcctatgatagcgtggag 881  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  26645738 tctctggccgagttatggtgaggtaaattaagcgaccaataagcctacgatagtgtggag 26645797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 382 - 472
Target Start/End: Original strand, 6938401 - 6938491
Alignment:
Q  382 taaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||| ||||||||||| ||||||||||||||| |||| ||||  |||||||||| |||||||| |||||  ||||||||||||||||||    
T  6938401 taaaaaacattttataatatccgtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacaccct 6938491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 319 - 475
Target Start/End: Complemental strand, 5730983 - 5730827
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaatt-ttctaaaaatcattttataatgtccgtaatttaaaaaag 417  Q
    ||||||||| ||||||  |||||||||||||| || ||||||||||||  ||  |||| | ||| |||||| ||||||||  |||||||||||||||| |    
T  5730983 aaaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaat-attttatagggtccgtaatttaaaaatg 5730885  T
Q  418 aaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||  | |  |||||| || ||| ||||||||||| ||||||||||||||||||||||    
T  5730884 aaatctaaaccctcccatctctttccctcctaaaccctccatccaaacacaccctaaa 5730827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 319 - 472
Target Start/End: Original strand, 45741981 - 45742134
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| || |||  |||||||||||||| ||  |||||||||||  ||  |||| ||| |||||| ||||| ||| ||||||||||||||||| ||    
T  45741981 aaaataaattaaatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatga 45742080  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || || |   |||||||||||| ||| ||||||| || ||||||||||||||||    
T  45742081 aaagtaaactctcccctccctttcccgcctaaacccttcatccaaacacaccct 45742134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 389 - 474
Target Start/End: Original strand, 54935230 - 54935315
Alignment:
Q  389 cattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||| ||| ||||||||||||||||| ||||  | |  ||||||||||||||||||||||||| |||||||||||||||||||||    
T  54935230 catttcatagtgtccgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccctccatccaaacacaccctaa 54935315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 320 - 464
Target Start/End: Complemental strand, 17938259 - 17938115
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||||||| ||||||  |||||||||||||| ||  ||||||||||| ||| ||||| ||| |||||| ||||  ||||||||| ||||||||||| |||    
T  17938259 aaataaattaagtgtgattgaagtattatatgatcgtttatcatgttattattttaaatttttaaaaaacattccataatgtccataatttaaaaacgaa 17938160  T
Q  420 aggtgagtcctcccctcccttcccctcctaaactctccatccaaa 464  Q
    |  | |   || |||||| |||||||||||||| |||||||||||    
T  17938159 aattaaactcttccctccattcccctcctaaaccctccatccaaa 17938115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 472
Target Start/End: Original strand, 31348493 - 31348565
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||| |||||||||||||| || |  ||||||||||||||||||||||||||||| |||||||||||||||    
T  31348493 gtccgttatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaactctcaatccaaacacaccct 31348565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 403 - 474
Target Start/End: Complemental strand, 44145842 - 44145771
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||  |  |||||||||||||||||    
T  44145842 cgtaatttaaaaaataaaagtgagtcctcccctcccttcccctcctaaaccttgaatccaaacacaccctaa 44145771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 319 - 474
Target Start/End: Original strand, 54320525 - 54320680
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  ||| |||||||||| ||| |||||||||||  ||   ||| ||| |||||| | ||| ||| |||||||||||||||||  |    
T  54320525 aaaataaattaagtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacgtttcatagtgtccgtaatttaaaaatta 54320624  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||    |  ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  54320625 aaatcaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 54320680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 319 - 475
Target Start/End: Complemental strand, 31348474 - 31348313
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| | ||||  ||||| |||||||| ||| |||||||||||  ||  |||  ||| |||||| ||||| ||| ||||||||||||||||| ||    
T  31348474 aaaataaattatgtgtgattgaattattatatgattgtttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatga 31348375  T
Q  419 aaggtgagtcctcccctcccttcccctc-----ctaaactctccatccaaacacaccctaaa 475  Q
    || || |  ||| |||||||||||||||     |||||| ||||||||||||||||||||||    
T  31348374 aaagtaaacccttccctcccttcccctcataaactaaaccctccatccaaacacaccctaaa 31348313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 383 - 472
Target Start/End: Complemental strand, 56135838 - 56135749
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||| ||||||| | ||| |||||||||||||| |||  |||  ||||||||||||||||||||||||| ||| |||||||||||||||    
T  56135838 aaaaaacattttacattgttcgtaatttaaaaaataaaaatgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 56135749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 270 - 386
Target Start/End: Original strand, 56135791 - 56135904
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||||||| ||||| |||||| ||||| ||||| ||||||||       ||||||||| |||||||||||||||||||||| || ||||||||   ||||    
T  56135791 agggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatca---tgtt 56135887  T
Q  370 aatttaattttctaaaa 386  Q
    |||| ||||||||||||    
T  56135888 aattcaattttctaaaa 56135904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 337 - 475
Target Start/End: Complemental strand, 2247938 - 2247805
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctc 436  Q
    |||||||||||||||||| |||||||| ||  ||| ||||  || ||| || ||||||||||||||||||||||||||| ||||  |||      |||||    
T  2247938 ttgaagtattatataattgtttatcatattaataagttaagattttaataaacattttataatgtccgtaatttaaaaatgaaaaatga-----accctc 2247844  T
Q  437 ccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    ||||| | | |||||||||| ||||||||| ||||||||    
T  2247843 ccttctctttctaaactctctatccaaacataccctaaa 2247805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 339 - 437
Target Start/End: Original strand, 44145842 - 44145940
Alignment:
Q  339 gaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcc 437  Q
    ||||||||| || || |||||| ||| |||||||| |||||| |||||||||||||||||||||  ||| ||||||||| || || || ||||||||||    
T  44145842 gaagtattacatgatcatttataatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcc 44145940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 319 - 472
Target Start/End: Original strand, 41174436 - 41174589
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| || |||  |||| ||||||||| || |||||| |||||  ||   ||| ||| |||||| ||||| ||| ||||| ||| ||||||| ||    
T  41174436 aaaataaatcaaatgtgattgatgtattatatgatcatttattatgttaatatgctaactttttaaaaaccatttcatagtgtccctaaattaaaaatga 41174535  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||  | |  | ||||||||||||||||||||||| |||||||||||||||||||    
T  41174536 aaactaaaccatcccctcccttcccctcctaaaccctccatccaaacacaccct 41174589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 403 - 475
Target Start/End: Original strand, 17182660 - 17182732
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||||||||||||| ||| || ||||||||| ||| |||||||| ||||| ||| ||||||||||||||||||    
T  17182660 cgtaatttaaaaaataaaagtaagtcctcccttcctttcccctcataaaccctcaatccaaacacaccctaaa 17182732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 406 - 474
Target Start/End: Original strand, 46007879 - 46007947
Alignment:
Q  406 aatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||||||||| || |  ||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  46007879 aatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacactctaa 46007947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 403 - 478
Target Start/End: Complemental strand, 54935137 - 54935061
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccc-tcccttcccctcctaaactctccatccaaacacaccctaaatga 478  Q
    |||||||||||||||||| || |  ||||||| |||||||||||||||||| ||| ||||||||||||||| |||||    
T  54935137 cgtaatttaaaaaagaaaagtaaaccctccccctcccttcccctcctaaaccctcaatccaaacacacccttaatga 54935061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 337 - 472
Target Start/End: Complemental strand, 24565481 - 24565346
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctc 436  Q
    ||||||||||||||  || ||||||| |||  ||| |||| ||| |||||| |||||  |||| ||||||||||||||| |||| || |  |||||||      
T  24565481 ttgaagtattatatgtttgtttatcacgttaataagttaactttttaaaaagcatttcgtaatatccgtaatttaaaaatgaaaagtaaaccctccccag 24565382  T
Q  437 ccttcccctcctaaactctccatccaaacacaccct 472  Q
     |||||| ||||||||  ||||||||||||||||||    
T  24565381 tcttcccttcctaaaccttccatccaaacacaccct 24565346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 400 - 474
Target Start/End: Original strand, 45132667 - 45132741
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||||||||||||||| || |  | || |||| ||||||||||||||||||| || ||||||||||||||    
T  45132667 gtccgtaatttaaaaaagaaaagtaaaccatctcctctcttcccctcctaaactctcaattcaaacacaccctaa 45132741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 428 - 474
Target Start/End: Original strand, 49735692 - 49735738
Alignment:
Q  428 cctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  49735692 cctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 49735738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 319 - 464
Target Start/End: Original strand, 35248777 - 35248922
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| |||||||||||||||  ||  |||| |||  |||||  ||| |  | ||||| ||||||||||  ||    
T  35248777 aaaataaattaagtgtgattgaagtattatatgattatttatcatgttaatacgttaacttttaaaaaaatattcttgagtgtccataatttaaaattga 35248876  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaa 464  Q
    || || |  |||||||||||| || ||||||||| |||||||||||    
T  35248877 aaagtaaaccctcccctccctacctctcctaaaccctccatccaaa 35248922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 319 - 420
Target Start/End: Complemental strand, 47433861 - 47433761
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||  ||||| ||||| ||| ||||||||| |||||| ||||  ||||||||| ||||||||||| ||    
T  47433861 aaaataaattaagtgtgattgaagtattatatgatcgtttat-atgttattattttaattttttaaaaaacattccataatgtccataatttaaaaacga 47433763  T
Q  419 aa 420  Q
    ||    
T  47433762 aa 47433761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 431 - 472
Target Start/End: Complemental strand, 53260759 - 53260718
Alignment:
Q  431 cccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  53260759 cccctcccttcccctcctaaaccctccatccaaacacaccct 53260718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 319 - 472
Target Start/End: Original strand, 55510261 - 55510412
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||   ||||||||||||| || ||| |||||||||||| || |||||| | ||||| |||||||| ||| |||||||| ||||| |    
T  55510261 aaaataaattaagtgtgactgaagtattatatgatcattcatcatgttgttatttcaatttttttaaaat-attttatagtgttcgtaattt-aaaaata 55510358  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || || |  |||| | |  ||| ||||| |||||||||||||||||||| ||||    
T  55510359 aaagtaaaccctcacatttctttccctcttaaactctccatccaaacacgccct 55510412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 319 - 475
Target Start/End: Original strand, 36151667 - 36151821
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||  |||||||||||  ||  |||| ||| ||||||||||||| || ||| | ||||||||||| ||    
T  36151667 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaacttt-taaaaatcattttctagtgttcataatttaaaaatga 36151765  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    || || | | || || | |||| ||||||||||  ||||||| ||||||||||||||    
T  36151766 aaagtaaattctacctttcctt-ccctcctaaatcctccatctaaacacaccctaaa 36151821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 389 - 476
Target Start/End: Complemental strand, 47694433 - 47694345
Alignment:
Q  389 cattttataatgtccgtaatttaaaaaagaaag-gtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaat 476  Q
    ||||| ||| |||||||||||||||| |||||  || || ||||||||||||||| |||| |||  ||||||||||||| |||||||||    
T  47694433 catttcatagtgtccgtaatttaaaagagaaaaagtaagccctcccctcccttccgctccaaaatcctccatccaaacataccctaaat 47694345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 319 - 458
Target Start/End: Original strand, 6891451 - 6891590
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||  ||||| ||||| ||| ||||||||| | |||| || || ||| ||||| ||||||||||| ||    
T  6891451 aaaataaattaagtgtgattgaagtattatatgatcgtttataatgttattattttaatttttttaaaaacaattcatagtgtccataatttaaaaacga 6891550  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctcca 458  Q
    ||    |   |||||||| |||||||||||||||| ||||    
T  6891551 aaatcaaactctcccctctcttcccctcctaaactatcca 6891590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 45741962 - 45741887
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    ||||||||||||||||| ||| || | ||||| | | | |||||||||||||| ||| ||||||||||||||||||    
T  45741962 gtccgtaatttaaaaaacaaaagtaaatcctcacattcattcccctcctaaaccctcaatccaaacacaccctaaa 45741887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 429 - 475
Target Start/End: Complemental strand, 26166980 - 26166934
Alignment:
Q  429 ctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  26166980 ctcccctccattcccctcctaaaccctcaatccaaacacaccctaaa 26166934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 319 - 416
Target Start/End: Complemental strand, 34108379 - 34108282
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaa-atcattttataatgtccgtaatttaaaaaa 416  Q
    ||||||||| |||| |  ||||||||||||| ||| |||||||||||| | | |||| |||| ||||| | ||||||||||| ||||||||||||||||    
T  34108379 aaaataaattaagtatgattgaagtattatacaataatttatcatgttat-attttacttttttaaaataacattttataatatccgtaatttaaaaaa 34108282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 404 - 474
Target Start/End: Original strand, 47433885 - 47433955
Alignment:
Q  404 gtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||||||||||| || |  ||||| |||||||||||||||||||  || | |||||||||||||||    
T  47433885 gtaatttaaaaaagaaaagtaaaccctcctctcccttcccctcctaaaccgtcaacccaaacacaccctaa 47433955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 403 - 472
Target Start/End: Original strand, 7977672 - 7977741
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||| |||  |||  |||||||||| |||||||| ||||| ||| |||||||||||||||    
T  7977672 cgtaatttaaaaaataaaattgaaccctcccctcctttcccctcataaaccctcaatccaaacacaccct 7977741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 410 - 475
Target Start/End: Complemental strand, 16400862 - 16400797
Alignment:
Q  410 taaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    ||||||| ||| |||| ||||||||||||||| |||||||||| ||| |||||| ||||| |||||    
T  16400862 taaaaaataaaagtgaatcctcccctcccttctcctcctaaaccctcaatccaatcacacactaaa 16400797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 379 - 472
Target Start/End: Complemental strand, 37761558 - 37761465
Alignment:
Q  379 ttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||  |||||||  ||| |||||||||||||  ||| ||||   || |||||| ||| |||||||||||||| |||||||||||||||    
T  37761558 ttctaaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctaccctcctttctcctcctaaactctcaatccaaacacaccct 37761465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 51075215 - 51075268
Alignment:
Q  346 tatataattatttatcatgttgttaatttaattttctaaaaatcattttataat 399  Q
    ||||| || ||||||||||||||||||| |||||| ||||||| ||||||||||    
T  51075215 tatatgatcatttatcatgttgttaattcaattttttaaaaattattttataat 51075268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 472
Target Start/End: Original strand, 1968563 - 1968603
Alignment:
Q  432 ccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  1968563 ccctcccttcccctcctaaaccctcaatccaaacacaccct 1968603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 405 - 473
Target Start/End: Original strand, 23332709 - 23332777
Alignment:
Q  405 taatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacccta 473  Q
    |||||||||||||||| ||||||| | | ||| |||||||||  |||||||| ||||||||||| ||||    
T  23332709 taatttaaaaaagaaaagtgagtcattcactctcttcccctcacaaactctcaatccaaacacatccta 23332777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 368 - 420
Target Start/End: Complemental strand, 35543411 - 35543359
Alignment:
Q  368 ttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
    |||||| |||||| ||||||| |||||||||||| | ||||||||||||||||    
T  35543411 ttaattcaattttttaaaaattattttataatgttcctaatttaaaaaagaaa 35543359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 472
Target Start/End: Complemental strand, 37711182 - 37711138
Alignment:
Q  428 cctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||| |||||||||||||||||| ||| |||||||||||||||    
T  37711182 cctcccttcccttcccctcctaaaccctcaatccaaacacaccct 37711138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 475
Target Start/End: Original strand, 56135933 - 56135968
Alignment:
Q  440 tcccctcctaaactctccatccaaacacaccctaaa 475  Q
    ||||||||||||| ||||||||||||||||||||||    
T  56135933 tcccctcctaaaccctccatccaaacacaccctaaa 56135968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 402 - 452
Target Start/End: Original strand, 24565518 - 24565568
Alignment:
Q  402 ccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaac 452  Q
    ||||||||||||||||||| || | | || |||||||||||||||||||||    
T  24565518 ccgtaatttaaaaaagaaatgtaaattcttccctcccttcccctcctaaac 24565568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 438 - 472
Target Start/End: Complemental strand, 51329830 - 51329796
Alignment:
Q  438 cttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||||||||||||||| |||||||||||||||    
T  51329830 cttcccctcctaaactctcaatccaaacacaccct 51329796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 383 - 468
Target Start/End: Complemental strand, 27735834 - 27735749
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacaca 468  Q
    ||||| ||| |||||  |||||||||||||||| ||||  | |  |||| | |||||||||||||||||| ||| |||||||||||    
T  27735834 aaaaaacatgttatatagtccgtaatttaaaaatgaaaattaaaccctctcttcccttcccctcctaaaccctcgatccaaacaca 27735749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 475
Target Start/End: Complemental strand, 35565616 - 35565555
Alignment:
Q  414 aaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    ||||||| || || |||||||||||||||||| |||||| ||| |||||||| ||| |||||    
T  35565616 aaagaaaagtaagccctcccctcccttcccctgctaaaccctcaatccaaacgcactctaaa 35565555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 3e-63; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 270 - 474
Target Start/End: Original strand, 34980852 - 34981056
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    ||||||||||||||||||||| ||||| |||||||||||||        ||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  34980852 agggttcacttttaatttttaaattacgaacaacgtaaaatatttttttaaaataaattaagtgtttttgaagtattatataatcatttatcatgttgtt 34980951  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    || | ||||||||| ||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||| ||||||  ||||||||    
T  34980952 aactcaattttctataaatcattttataatgtccataatttaaaaaagaaaagtaagtcctcccctcccttcccctcttaaaccctccattaaaacacac 34981051  T
Q  470 cctaa 474  Q
    |||||    
T  34981052 cctaa 34981056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 270 - 474
Target Start/End: Original strand, 10204618 - 10204822
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||| ||||||||| |||||| ||||| ||||| ||||||||       ||||||||| |||||||||||||||||||||| || |||||| | ||||||    
T  10204618 agggctcacttttattttttaaattaccaacaatgtaaaatgtctttttaaaataaattaagtgtttttgaagtattatatgatcatttattacgttgtt 10204717  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    |||| |||||| ||||||||||||| ||||||| |||| |||||||||||| || ||||||||||||||||||||||||||||||||  |||||||||||    
T  10204718 aattcaattttttaaaaatcattttttaatgtctgtaaattaaaaaagaaaagtaagtcctcccctcccttcccctcctaaactctctttccaaacacac 10204817  T
Q  470 cctaa 474  Q
    |||||    
T  10204818 cctaa 10204822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 275 - 465
Target Start/End: Original strand, 10043299 - 10043489
Alignment:
Q  275 tcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaattt 374  Q
    ||||||||| |||||| ||||| ||||| |||||||        |||| |||| |||||||||||||||||||||| ||||||||| ||||||||||||     
T  10043299 tcacttttattttttaaattacgaacaatgtaaaatattgttttaaaagaaattaagtgtttttgaagtattatatgattatttataatgttgttaattc 10043398  T
Q  375 aattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaac 465  Q
    ||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||  ||||||||||  || ||||||||    
T  10043399 aattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtgagtcctcccctcccttttcctcctaaacaatcaatccaaac 10043489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 319 - 475
Target Start/End: Complemental strand, 33744346 - 33744190
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||||||||||||| | ||||| || ||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  33744346 aaaataaattaagtgtttttgaagaaatatatgatcatttatcatgttgttaattcaattttcaaaaaatcattttataatgtccataatttaaaaaaga 33744247  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    || || |  |||||||||||||| || ||| ||| ||||||||||||||||||||||    
T  33744246 aaagtaaaccctcccctcccttctccgccttaaccctccatccaaacacaccctaaa 33744190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 270 - 474
Target Start/End: Complemental strand, 15986826 - 15986622
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||| ||||||||| |||||| ||||| ||||| ||||||||       ||||||||| |||||||||| ||||||||||| || ||||   ||||||||    
T  15986826 agggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaaataaattaagtgtttttaaagtattatatgatcattttaaatgttgtt 15986727  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    |||| |||||| ||||| ||||||||||||||| |||| ||||||||||||  | |||||||||||||||||||||||||||| |||  |||||||||||    
T  15986726 aattcaattttttaaaagtcattttataatgtctgtaaattaaaaaagaaaattaagtcctcccctcccttcccctcctaaaccctctttccaaacacac 15986627  T
Q  470 cctaa 474  Q
    |||||    
T  15986626 cctaa 15986622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 319 - 474
Target Start/End: Complemental strand, 40305818 - 40305668
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||| |||||||||||| ||||| || ||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||    
T  40305818 aaaataaattaagggtttttgaagtactatatgatcatttatcatattgttaattcaattttctaaaaattattttataatgtctgtaatttaaaaaaga 40305719  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||  | ||     ||||||||||||||||||||| |||||||||||||||||||||    
T  40305718 aaactaag-----ccctcccttcccctcctaaaccctccatccaaacacaccctaa 40305668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 319 - 469
Target Start/End: Original strand, 21581038 - 21581188
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaattt-aaaaaag 417  Q
    ||||||||| ||||||||||||||||| |||| |  ||||||||||||||||||| |||||||||||||| |||| |||| |||| |||||| |||||||    
T  21581038 aaaataaattaagtgtttttgaagtatcatatgaacatttatcatgttgttaattcaattttctaaaaattatttcataacgtccataatttaaaaaaag 21581137  T
Q  418 aaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    ||| || ||| | |||||||||||||||||||||| ||||||||||||||||    
T  21581138 aaaagttagt-cacccctcccttcccctcctaaaccctccatccaaacacac 21581188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 320 - 472
Target Start/End: Complemental strand, 12036087 - 12035936
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||||||| |||||||||| ||||||||||| || ||||||||||||| ||||| |||||||||| ||| |||||||||||| | |||||||||||||||    
T  12036087 aaataaattaagtgttttttaagtattatatgataatttatcatgttg-taattcaattttctaataataattttataatgttcataatttaaaaaagaa 12035989  T
Q  420 aggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |    |||||||| |||||||||||||||||||  || |||||||||||||||    
T  12035988 aaacaagtcctcctctcccttcccctcctaaaccatctatccaaacacaccct 12035936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 275 - 412
Target Start/End: Complemental strand, 8551615 - 8551478
Alignment:
Q  275 tcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaattt 374  Q
    ||||||||| |||||| ||||| | ||| ||||||||       ||||||||| |||||||||| ||||||||||| || |||||| |||||||||||||    
T  8551615 tcacttttattttttaaattacgagcaatgtaaaatgtgttttaaaaataaattaagtgtttttaaagtattatatgatcatttataatgttgttaattt 8551516  T
Q  375 aattttctaaaaatcattttataatgtccgtaatttaa 412  Q
    |||||| ||||||||||||||||||||| ||| |||||    
T  8551515 aattttttaaaaatcattttataatgtctgtagtttaa 8551478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 356 - 472
Target Start/End: Complemental strand, 14245204 - 14245088
Alignment:
Q  356 tttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactct 455  Q
    |||||||||||  ||  |||| |||||||||| ||||| | | |||||||||||||||||||||| || | |||||||||||||||||||||||||| ||    
T  14245204 tttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccct 14245105  T
Q  456 ccatccaaacacaccct 472  Q
    | |||||||||||||||    
T  14245104 caatccaaacacaccct 14245088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 373 - 470
Target Start/End: Original strand, 1657958 - 1658055
Alignment:
Q  373 ttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    |||| ||| |||||| ||||||||| ||||||||||||||||| |||| || |  ||||||||||||||||||||||||| |||||||||||||||||    
T  1657958 ttaactttttaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 1658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 319 - 467
Target Start/End: Original strand, 36363123 - 36363271
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  ||||||| |||||| ||| ||||||||| |  ||  |||| |||||||||  ||||||||| | ||||||||||||||| ||    
T  36363123 aaaataaatcaagtgtcattgaagttttatatcattgtttatcatgctaatatgttaactttctaaaagacattttatagtatccgtaatttaaaaatga 36363222  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacac 467  Q
    || ||||   ||| |||||||||||||||||||| ||||||||||||||    
T  36363223 aaagtgaactctctcctcccttcccctcctaaaccctccatccaaacac 36363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 342 - 420
Target Start/End: Complemental strand, 6597920 - 6597842
Alignment:
Q  342 gtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
    ||||||||| || |||||||||||||||| || ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  6597920 gtattatatgatcatttatcatgttgttatttcaattttcaaaaaatcattttacaatgtccgtaatttaaaaaagaaa 6597842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 320 - 465
Target Start/End: Original strand, 6382419 - 6382564
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||||||| |||| |||||||||||| | || |  ||||||||||||||||||| |||||||||||||  |||||||||||||||||| ||| |||||||    
T  6382419 aaataaattaagtctttttgaagtatcacatgaacatttatcatgttgttaattcaattttctaaaaagtattttataatgtccgtaaattagaaaagaa 6382518  T
Q  420 aggtgagtcctcccctcccttcccctcctaaactctccatccaaac 465  Q
    | || |||| | |||||  ||  ||||||||||  || ||||||||    
T  6382519 aagtaagtcattccctcttttatcctcctaaaccttcaatccaaac 6382564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 270 - 387
Target Start/End: Original strand, 5688455 - 5688572
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||||||||||||| |||||| ||||| ||||| ||||||||       |||||| || |||||||||||||||||||||| || ||  |||||||||||    
T  5688455 agggttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattatatcatcatcaatcatgttgtt 5688554  T
Q  370 aatttaattttctaaaaa 387  Q
    |||| |||||||||||||    
T  5688555 aattcaattttctaaaaa 5688572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 319 - 475
Target Start/End: Original strand, 7544227 - 7544383
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||| ||||| |||||  ||   ||| ||| |||||| ||||| ||| ||||||||||||||||| ||    
T  7544227 aaaataaatcaagtgtgattgaagtattatatgattgtttattatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatga 7544326  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    ||    |  |||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  7544327 aaaccaaaccctccccttccttcccctcctaaaccctccatccaaacacaccttaaa 7544383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 319 - 475
Target Start/End: Complemental strand, 10043162 - 10043007
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||| ||| |||||||||| ||||||||||| || ||||||||||||||||||| ||||||||| |||| ||| | ||||||   |||||||| |||||    
T  10043162 aaaattaattaagtgtttttaaagtattatatgatcatttatcatgttgttaattcaattttctagaaataattctttaatgtttataatttaagaaaga 10043063  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    || || |||| | |||||  ||  |||||||||| ||| || |||||||||||||||    
T  10043062 aaagtaagtcat-ccctcatttttcctcctaaaccctcgattcaaacacaccctaaa 10043007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 319 - 471
Target Start/End: Original strand, 13634802 - 13634954
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| | ||||  ||||| |||||||| ||  |||||||||||  ||  |||| ||| |||||| ||||| ||| ||| ||||||||||||| ||    
T  13634802 aaaataaattatgtgtgattgaattattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgttcgtaatttaaaaatga 13634901  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccc 471  Q
    || || |  ||||||||||||||||||||||||| ||| ||||||||||||||    
T  13634902 aaagtaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 13634954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 357 - 475
Target Start/End: Original strand, 2183943 - 2184061
Alignment:
Q  357 ttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctc 456  Q
    |||||||||||||| || |||||| |||| | ||||||||||||||||||||||||| | ||||  | || ||||  ||  ||||||||| ||||| |||    
T  2183943 ttatcatgttgttatttcaattttttaaataacattttataatgtccgtaatttaaagaggaaaaataagccctcttctatcttcccctcttaaaccctc 2184042  T
Q  457 catccaaacacaccctaaa 475  Q
    |||||||||||||||||||    
T  2184043 catccaaacacaccctaaa 2184061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 337 - 475
Target Start/End: Original strand, 11437048 - 11437189
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtga---gtcctccc 433  Q
    |||||||||||||  || |||||||  | ||||| ||||||||| |||||| ||||||||| ||| | || ||||||||||||| || |   ||||||||    
T  11437048 ttgaagtattatacgatcatttatcgcgctgttattttaattttttaaaaaacattttatagtgttcctattttaaaaaagaaaagtaagtcgtcctccc 11437147  T
Q  434 ctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
     ||||||||||| |||||| ||| ||||||| ||||||||||    
T  11437148 ttcccttccccttctaaaccctcaatccaaaaacaccctaaa 11437189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 319 - 474
Target Start/End: Complemental strand, 28279629 - 28279474
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||  ||||||  |||||||||||||| || ||||||||||||  ||  |||| ||| |||||| ||||| ||||||||| ||||||||||| ||    
T  28279629 aaaataaactaagtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcataatgtccataatttaaaaatga 28279530  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    || || | |  || || || ||||| ||| |||| |||||||||||||||||||||    
T  28279529 aaagtaaattttcaccccctttcccatcccaaaccctccatccaaacacaccctaa 28279474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 319 - 472
Target Start/End: Complemental strand, 8502988 - 8502835
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||| ||||| | |||||| ||  |   |||| ||| ||||||  |||| ||||||||||||||||||||| ||    
T  8502988 aaaataaattaagtgtgattgaagtattatgtaattgtgtatcatattaatttgttaactttttaaaaaatatttcataatgtccgtaatttaaaaatga 8502889  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || ||||  |||||| ||| ||||| || |||||  ||||||||||||||||||    
T  8502888 aaagtgaaccctcccatccattcccttcataaaccatccatccaaacacaccct 8502835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 319 - 472
Target Start/End: Original strand, 16938570 - 16938723
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  ||||| |||||||| || ||||||||||||   |  |||| | | |||||| ||||| ||| |||| |||||||||||| ||    
T  16938570 aaaataaattaagtgtgattgaaatattatatgatcatttatcatgttaacatgttaactctttaaaaaacatttcatagtgtcagtaatttaaaaatga 16938669  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||  | |  |||||||||| |||| ||||||||| |||||||||||||||||||    
T  16938670 aatctaaaccctcccctccattcctctcctaaaccctccatccaaacacaccct 16938723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 7544208 - 7544136
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||||||||||  | || |||||||||||||||| |||||||| ||| |||||||||||||||    
T  7544208 gtccgtaatttaaaaaagaaaatttagccctcccctcccttcccttcctaaaccctcaatccaaacacaccct 7544136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 404 - 472
Target Start/End: Complemental strand, 10204644 - 10204576
Alignment:
Q  404 gtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||||||||| ||| ||||| |||| |||||||||||||||||||| ||| |||||||||||||||    
T  10204644 gtaatttaaaaaataaaagtgagccctcacctcccttcccctcctaaaccctcgatccaaacacaccct 10204576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 13634783 - 13634711
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||| |||||||||||||| || |  ||||||||||||||||||||||||| ||| |||||||||||||||    
T  13634783 gtccgttatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 13634711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 389 - 472
Target Start/End: Original strand, 15986785 - 15986868
Alignment:
Q  389 cattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||| | ||| |||||||||||||| ||| ||||| ||||| || |||||||||||||||| ||| |||||||||||||||    
T  15986785 cattttacattgttcgtaatttaaaaaataaaagtgagccctcctcttccttcccctcctaaaccctcaatccaaacacaccct 15986868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 429 - 475
Target Start/End: Original strand, 10476229 - 10476275
Alignment:
Q  429 ctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  10476229 ctcccctcccttcccctcctaaaccctccatccaaacacaccctaaa 10476275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 11437017 - 11436939
Alignment:
Q  394 tataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||| ||||||||||||||||||| || || || ||||| ||||||||||||||||||| ||| |||||||||| ||||    
T  11437017 tatattgtccgtaatttaaaaaaggaaagtaagccctcctctcccttcccctcctaaaccctcaatccaaacacgccct 11436939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 403 - 472
Target Start/End: Original strand, 40305840 - 40305909
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||| |||  ||||| ||||||||||||| |||||||||| ||| |||||||||||||||    
T  40305840 cgtaatttaaaaaataaaaatgagttctcccctcccttctcctcctaaaccctcaatccaaacacaccct 40305909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 26414965 - 26414893
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||||| |||| || |  |||||||||||||| |||||||||| ||| |||||||||||||||    
T  26414965 gtccgtaatttaaaaacgaaaagtaaaccctcccctcccttctcctcctaaaccctcaatccaaacacaccct 26414893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 399 - 474
Target Start/End: Original strand, 14245217 - 14245292
Alignment:
Q  399 tgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||||||||||| ||||    |  ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  14245217 tgtccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 14245292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 399 - 469
Target Start/End: Original strand, 11757074 - 11757144
Alignment:
Q  399 tgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    ||||||||||||||||| ||||  | |  ||||||||||||||||||| ||||| ||||||||||||||||    
T  11757074 tgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 11757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 473
Target Start/End: Original strand, 14684639 - 14684729
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacccta 473  Q
    ||||| ||||||||| || |||||||| |||||||||| || || ||||| ||| || |||||||||||| ||  ||||||||||||||||    
T  14684639 aaaaaacattttatattgcccgtaattaaaaaaagaaaagtaagccctcctctctctgcccctcctaaaccctaaatccaaacacacccta 14684729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 428 - 474
Target Start/End: Complemental strand, 16938523 - 16938477
Alignment:
Q  428 cctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  16938523 cctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 16938477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 4373738 - 4373814
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaat 476  Q
    ||||||||||||||||||||| || | |||||| ||   ||||| |||||||| ||| |||||||||||||||||||    
T  4373738 gtccgtaatttaaaaaagaaaagtaaatcctccactattttcccttcctaaaccctcaatccaaacacaccctaaat 4373814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 409 - 468
Target Start/End: Original strand, 2550533 - 2550592
Alignment:
Q  409 ttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacaca 468  Q
    |||||||||||| || |  ||||||||||||||||||||||||| ||| |||||||||||    
T  2550533 ttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 427 - 474
Target Start/End: Original strand, 5688589 - 5688636
Alignment:
Q  427 tcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||||    
T  5688589 tcctcccttcccttcccctcctaaaccctcaatccaaacacaccctaa 5688636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 403 - 470
Target Start/End: Original strand, 8551593 - 8551660
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    |||||||||||||| ||| ||||| || |||||| |||||||||||||||  || |||||||||||||    
T  8551593 cgtaatttaaaaaataaaagtgagaccccccctctcttcccctcctaaaccttcaatccaaacacacc 8551660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 452
Target Start/End: Complemental strand, 10043334 - 10043272
Alignment:
Q  390 attttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaac 452  Q
    |||||| | ||| |||||||||||||| ||| ||||||| ||||||||||||||||| |||||    
T  10043334 attttacattgttcgtaatttaaaaaataaaagtgagtcatcccctcccttcccctcataaac 10043272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 470
Target Start/End: Complemental strand, 10650517 - 10650429
Alignment:
Q  384 aaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctccc--ttcccctcctaaactctccatccaaacacacc 470  Q
    |||| ||||| ||| |||||||||||||||||  ||| || | ||||||||||||  |||||||||||||  |||||||||||| ||||    
T  10650517 aaaaacatttcatagtgtccgtaatttaaaaataaaaagtaaatcctcccctcccttttcccctcctaaatcctccatccaaacgcacc 10650429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 432 - 477
Target Start/End: Original strand, 20147074 - 20147119
Alignment:
Q  432 ccctcccttcccctcctaaactctccatccaaacacaccctaaatg 477  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  20147074 ccctcccttcccctcctaaaccctcaatccaaacacacccttaatg 20147119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 403 - 472
Target Start/End: Original strand, 33744368 - 33744437
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||| | ||| ||||| ||||||||||||||  ||||||||| ||| ||||||| |||||||    
T  33744368 cgtaatttaaaatataaaagtgagccctcccctcccttcatctcctaaaccctcaatccaaatacaccct 33744437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 433 - 477
Target Start/End: Original strand, 10650619 - 10650663
Alignment:
Q  433 cctcccttcccctcctaaactctccatccaaacacaccctaaatg 477  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||    
T  10650619 cctcccttcccctcccaaactttcaatccaaacacaccctaaatg 10650663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 404 - 472
Target Start/End: Complemental strand, 40815365 - 40815297
Alignment:
Q  404 gtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||||||||||||| || | ||||| | |||||||||||||||||   || |||||||||||||||    
T  40815365 gtaatttaaaaaagaaaagtaaatcctctcttcccttcccctcctaaatcttcaatccaaacacaccct 40815297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 13839863 - 13839780
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
    |||||||||||||| ||| | ||||||||| ||| || || |||  ||||  ||||||||| ||||| ||||||||||||||||    
T  13839863 ttgaagtattatatgattgtctatcatgttattatttcaacttttcaaaatacattttatagtgtccataatttaaaaaagaaa 13839780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 474
Target Start/End: Original strand, 15858915 - 15858986
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||| |||| ||| ||||||| |||||||||||| ||||| |||  ||| || ||||||||||||||    
T  15858915 cgtaatttagaaaataaatgtgagtcatcccctcccttcacctcccaaagcctcaattcaaacacaccctaa 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 472
Target Start/End: Complemental strand, 18199575 - 18199528
Alignment:
Q  425 agtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||||| |||||| ||||||| |||||||||| |||||    
T  18199575 agtcctcccctccctttccctccgaaactcttcatccaaacataccct 18199528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 470
Target Start/End: Complemental strand, 34980879 - 34980812
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    |||||||||||||  ||| ||||  ||| |||||||||||||||||||||  || |||||||||||||    
T  34980879 cgtaatttaaaaattaaaagtgaacccttccctcccttcccctcctaaaccttcaatccaaacacacc 34980812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 319 - 421
Target Start/End: Original strand, 9856971 - 9857073
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||  ||||| |||||  ||  |||| ||| |||||| ||||| ||| ||||||||| ||||||| ||    
T  9856971 aaaataaatcaagtgtgattgaagtattatatgatcgtttattatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaacttaaaaatga 9857070  T
Q  419 aag 421  Q
    |||    
T  9857071 aag 9857073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 440 - 474
Target Start/End: Original strand, 22023571 - 22023605
Alignment:
Q  440 tcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||||||| |||||||||||||||||||||    
T  22023571 tcccctcctaaaccctccatccaaacacaccctaa 22023605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 384 - 475
Target Start/End: Original strand, 35176815 - 35176908
Alignment:
Q  384 aaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcct--cccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||| ||||||||| ||||| |||||||||||||||| || | | ||  |||| ||| |||||| |||||| || || ||||||||||||||||    
T  35176815 aaaagcattttatagtgtccataatttaaaaaagaaaagtaaattctccccccccccctccccttctaaaccctacaaccaaacacaccctaaa 35176908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 320 - 369
Target Start/End: Complemental strand, 14684634 - 14684585
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||||||| ||||||  ||||| ||||||||| |||||||||||||||||    
T  14684634 aaataaattaagtgtgattgaaatattatatacttatttatcatgttgtt 14684585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 420
Target Start/End: Complemental strand, 16501943 - 16501842
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  || |||| |||||| || |||||| |||||  ||  |||| |||  ||||| ||||| ||||||||||||||||||||| ||    
T  16501943 aaaataaatcaagtgtgattaaagttttatatgatcatttattatgttaatatgttaacttttaaaaaaacatttcataatgtccgtaatttaaaaatga 16501844  T
Q  419 aa 420  Q
    ||    
T  16501843 aa 16501842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 1e-62; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 272 - 474
Target Start/End: Complemental strand, 48881759 - 48881556
Alignment:
Q  272 ggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaa-taaataaagtgtttttgaagtattatataattatttatcatgttgtta 370  Q
    ||||||||||||||||||| ||||||||||||||||||||       |||| ||||| |||| ||||||||| |||||||||| ||||||||||||||||    
T  48881759 ggttcacttttaatttttaaattacaaacaacgtaaaatgtttttttaaaaataaattaagtatttttgaagcattatataatcatttatcatgttgtta 48881660  T
Q  371 atttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    ||| |||||||| ||||| ||||||||||||||||||||||||||||||| || || | ||||||||||||||||||||||| |||||||||||||||||    
T  48881659 attcaattttctgaaaattattttataatgtccgtaatttaaaaaagaaaagtaagccatcccctcccttcccctcctaaaccctccatccaaacacacc 48881560  T
Q  471 ctaa 474  Q
    ||||    
T  48881559 ctaa 48881556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 320 - 472
Target Start/End: Complemental strand, 28074255 - 28074103
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||||||| |||||||||||||||||||||| || |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28074255 aaataaattaagtgtttttgaagtattatatgatcatttatcaggttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 28074156  T
Q  420 aggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    | |||||| ||||||||||||||||||||||||  || |||||||||||||||    
T  28074155 aagtgagttctcccctcccttcccctcctaaaccttcaatccaaacacaccct 28074103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 270 - 474
Target Start/End: Original strand, 33519090 - 33519294
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||| ||||||||| |||||| ||||| |||||  |||||||        |||||||| |||||||||||||||||||||| || |||||||||||||||    
T  33519090 agggctcacttttattttttaaattacgaacaatataaaatgtttttttgaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgtt 33519189  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    |||| |||||||||||||||||||||||||||| |||||||||| |||||| || |  ||||||||||||||||||||||||| ||||||||||||||||    
T  33519190 aattcaattttctaaaaatcattttataatgtctgtaatttaaagaagaaaagtaatccctcccctcccttcccctcctaaaccctccatccaaacacac 33519289  T
Q  470 cctaa 474  Q
    |||||    
T  33519290 cctaa 33519294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 270 - 474
Target Start/End: Complemental strand, 36267755 - 36267551
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||| ||| ||||| |||||| ||||||| ||| ||||||||       |||||| |  |||||||||||||||||||||| || ||||||||| |||||    
T  36267755 agggctcatttttattttttaaattacaaccaatgtaaaatgttttttcaaaatatagtaagtgtttttgaagtattatatgatcatttatcatattgtt 36267656  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
     ||| ||||||||||||||||||||||||| ||||||||||||||||||||  | || ||||||||||||||||||||||||| ||||||||||||||||    
T  36267655 gattcaattttctaaaaatcattttataatatccgtaatttaaaaaagaaaactaagccctcccctcccttcccctcctaaaccctccatccaaacacac 36267556  T
Q  470 cctaa 474  Q
    |||||    
T  36267555 cctaa 36267551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 270 - 451
Target Start/End: Original strand, 37925883 - 37926064
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||||||||||||| |||||| ||||| ||||| ||||||||        ||||| || |||||||||||||||||||||| || ||  |||||||||||    
T  37925883 agggttcacttttattttttaaattacgaacaatgtaaaatgttttttttaaatagattaagtgtttttgaagtattatatcatcatcaatcatgttgtt 37925982  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaa 451  Q
    |||| ||||||||||| ||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| |||||||    
T  37925983 aattcaattttctaaacatcattttataatgtccgtaatttagaaaagaaaaatgagtcctcccctcccttcccttcctaaa 37926064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 279 - 462
Target Start/End: Original strand, 35422015 - 35422198
Alignment:
Q  279 ttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaatt 378  Q
    ||||| |||||| ||||||||||| ||||||||       ||||||||| ||||||||||||||||| |||| ||||||||| |||||||||||| ||||    
T  35422015 ttttattttttaaattacaaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtatcatatgattatttattatgttgttaattcaatt 35422114  T
Q  379 ttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatcca 462  Q
    |||||||||| ||||||||||||||||||||| ||||||||| || |  ||||| |||  || ||||||||||| ||| |||||    
T  35422115 ttctaaaaattattttataatgtccgtaattttaaaaagaaaagtaaaccctccactctatttccctcctaaaccctcaatcca 35422198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 273 - 466
Target Start/End: Original strand, 37620819 - 37621012
Alignment:
Q  273 gttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaat 372  Q
    |||||||||| ||||| | ||||  ||||| ||||||||       ||||||||| || ||||||||||||||||||||||  |||||||||||| ||||    
T  37620819 gttcactttttattttcaaattatgaacaatgtaaaatgattttttaaaataaattaaatgtttttgaagtattatataatcttttatcatgttgataat 37620918  T
Q  373 ttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaaca 466  Q
    | ||||||| ||||||||||||||||||||| |||||||||||||||| |  |  |||||||||||||||| ||  |||| |||||||||||||    
T  37620919 tcaattttccaaaaatcattttataatgtccataatttaaaaaagaaaagcaaaccctcccctcccttcccttctcaaaccctccatccaaaca 37621012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 319 - 437
Target Start/End: Original strand, 39646560 - 39646678
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| || ||||||||||||||||||| || ||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  39646560 aaaataaattaactgtttttgaagtattatatcatcatcaatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaata 39646659  T
Q  419 aaggtgagtcctcccctcc 437  Q
    || ||||||| ||||||||    
T  39646660 aaagtgagtcatcccctcc 39646678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 320 - 472
Target Start/End: Original strand, 48015299 - 48015451
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||||||| |||||||||||||  ||||||| || ||||||||||||||||||| ||||||| |||||| ||||||||| ||| |||||||||||| |||    
T  48015299 aaataaattaagtgtttttgaaaaattatatgatcatttatcatgttgttaattcaattttccaaaaattattttataaagtctgtaatttaaaaacgaa 48015398  T
Q  420 aggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    | || ||  |||  ||||||||||||||||| | ||||||||||||| |||||    
T  48015399 aagtaagctctcatctcccttcccctcctaatccctccatccaaacaaaccct 48015451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 326 - 472
Target Start/End: Complemental strand, 30592399 - 30592253
Alignment:
Q  326 ataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtga 425  Q
    |||||||| | |||||||||||||| |||||||||||| |  ||| || |||||| |||||||||||||||| |||| ||||||||||||||||| || |    
T  30592399 ataaagtgctattgaagtattatatgattatttatcatatgattatttcaattttttaaaaatcattttatagtgtctgtaatttaaaaaagaaaagtaa 30592300  T
Q  426 gtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    | |||||| |||||| ||||||||||  ||||||||||| |||||||    
T  30592299 gccctcccttccctttccctcctaaatcctccatccaaatacaccct 30592253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 319 - 437
Target Start/End: Original strand, 21857438 - 21857555
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||||||||| |||| ||| || ||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| |||    
T  21857438 aaaataaattaagtgtttttgaaatattgtatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgttcgtaa-ttaaaagaga 21857536  T
Q  419 aaggtgagtcctcccctcc 437  Q
    || || ||||||| |||||    
T  21857537 aaagtaagtcctctcctcc 21857555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 319 - 478
Target Start/End: Original strand, 16833786 - 16833948
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataat---gtccgtaatttaaaaa 415  Q
    |||| |||| ||||||||||||||||||| || || |||||||||||| |||||| |||||| ||||||| || |||||||   ||| ||||||| ||||    
T  16833786 aaaaaaaattaagtgtttttgaagtattacatgatcatttatcatgttattaattcaattttataaaaattatattataatgaagtctgtaattttaaaa 16833885  T
Q  416 agaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaatga 478  Q
    ||||| || | ||||| ||| |||||||||| ||||  || ||||||||||||||||||||||    
T  16833886 agaaaagtaactcctctccttccttcccctcttaaatcctgcatccaaacacaccctaaatga 16833948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 319 - 474
Target Start/End: Complemental strand, 40196685 - 40196530
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||| ||||||| |||| ||  |||| ||| || ||| ||||||||| ||||||||||| ||||| ||    
T  40196685 aaaataaattaagtgtgattgaagtattatatgattgtttatcaggttgatatgttaactttttataaaacattttatagtgtccgtaattcaaaaatga 40196586  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    || || |  ||||| |||||||||||||| |||| |||||||||||||||||||||    
T  40196585 aaagtaaaccctcctctcccttcccctcccaaaccctccatccaaacacaccctaa 40196530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 319 - 474
Target Start/End: Complemental strand, 41497110 - 41496955
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||| ||||||| || ||||||||||||  ||  |||| ||| |||||| |||||  || |||||||||||||||||  |    
T  41497110 aaaataaattaagtgtgattgaagaattatatgatcatttatcatgttaatatgttaaatttttaaaaaacatttcctattgtccgtaatttaaaaataa 41497011  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    || || | || ||||||||||||||||||||||| |||||||||||||||||||||    
T  41497010 aaagtaaatcatcccctcccttcccctcctaaaccctccatccaaacacaccctaa 41496955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 2087896 - 2087765
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatat----aattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaa 414  Q
    |||||||||  | |||||||||||||||||||    ||||||||||||||||||||||| | |||| ||||||| |||||||||| ||||||||||||||    
T  2087896 aaaataaatttaatgtttttgaagtattatatgatcaattatttatcatgttgttaattcatttttttaaaaattattttataatatccgtaatttaaaa 2087797  T
Q  415 aagaaaggtgagtcctcccctcccttcccctc 446  Q
    |||||| || |||| | | |||||||||||||    
T  2087796 aagaaaagtaagtctttctctcccttcccctc 2087765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 337 - 472
Target Start/End: Original strand, 18231695 - 18231830
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctc 436  Q
    |||||||||||||| ||  |||||||||||  ||  |||| ||| |||||| ||||| ||| |||  |||||||||||| |||| || | ||||||||||    
T  18231695 ttgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtttgtaatttaaaaatgaaaagtaaatcctcccctc 18231794  T
Q  437 ccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||||| |||||||||||||||||||    
T  18231795 ccttcccctcctaaacgctccatccaaacacaccct 18231830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 331 - 447
Target Start/End: Complemental strand, 31364183 - 31364070
Alignment:
Q  331 gtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcct 430  Q
    |||||||||||||||||||| || ||||||   || ||| ||| |||||||| |||||||||||||||||||||||||||| |||||||| || ||  ||    
T  31364183 gtgtttttgaagtattatatgatcatttat---gtcgttgattcaattttcttaaaatcattttataatgtccgtaatttagaaaagaaaagtaagctct 31364087  T
Q  431 cccctcccttcccctcc 447  Q
    |||||||||||||||||    
T  31364086 cccctcccttcccctcc 31364070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 319 - 464
Target Start/End: Complemental strand, 3216013 - 3215870
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||| ||| ||||||||||||| || ||||||||| ||||||||| |||||||||||||||||||||||| ||  ||||||| |||||||    
T  3216013 aaaataaatcaagtatttatgaagtattatatgatcatttatcatattgttaattcaattttctaaaaatcattttataa-gtttgtaatttgaaaaaga 3215915  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaa 464  Q
    ||  | || ||| ||||||||||||||| ||||   ||||||||||    
T  3215914 aaactaagccct-ccctcccttcccctcttaaatcttccatccaaa 3215870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 378 - 472
Target Start/End: Complemental strand, 33519142 - 33519048
Alignment:
Q  378 tttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||| ||||| ||||||||| ||| |||||||||||||| ||| ||||| ||||||||||||||||||||||||  |||||||||||||| ||||    
T  33519142 tttcaaaaaaacattttatattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaacctccatccaaacactccct 33519048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 319 - 472
Target Start/End: Complemental strand, 4833684 - 4833531
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| || |||  || ||||||||||| ||| |||||||||||  ||  |||| ||| || ||| ||||| ||| |||| |||||||||||| ||    
T  4833684 aaaataaattaaatgtgatttaagtattatatgattgtttatcatgttaataggttaactttttataaaacatttcatagtgtctgtaatttaaaaatga 4833585  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || || |  ||||||||||||||||||||||||| ||||||||||||| |||||    
T  4833584 aaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacataccct 4833531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 284 - 437
Target Start/End: Original strand, 48013558 - 48013712
Alignment:
Q  284 atttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtatt-atataattatttatcatgttgttaatttaattttct 382  Q
    ||||||| ||||| ||||| ||||||||       ||||||||| |||||||||||||  ||| |||| || ||||||||||||||||||| ||||||||    
T  48013558 atttttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaaaaattcatatgatcatttatcatgttgttaattcaattttct 48013657  T
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcc 437  Q
    |||||| ||||||||| ||| || ||||||||| |||| || ||  |||||||||    
T  48013658 aaaaattattttataaagtctgtgatttaaaaacgaaaagtaagctctcccctcc 48013712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 390 - 479
Target Start/End: Complemental strand, 8122226 - 8122137
Alignment:
Q  390 attttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaatgag 479  Q
    ||||||||  || |||||||||||||| ||| ||||||| |||||||||||| ||||||||| |||| || |||||||||||||||||||    
T  8122226 attttatatggttcgtaatttaaaaaataaaagtgagtcttcccctcccttctcctcctaaattctcaattcaaacacaccctaaatgag 8122137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 383 - 472
Target Start/End: Complemental strand, 37925930 - 37925841
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||| ||||||| | ||| |||||||||||||| ||| ||||  ||||||||||||||||||||||||| ||| |||||||||||||||    
T  37925930 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 37925841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 400 - 472
Target Start/End: Original strand, 39856037 - 39856109
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||||||||||||||||| || |  ||||||||||||||||||||||||| ||| |||||||||||||||    
T  39856037 gtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 39856109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 319 - 419
Target Start/End: Original strand, 3143571 - 3143675
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttg----ttaatttaattttctaaaaatcattttataatgtccgtaatttaaaa 414  Q
    ||||||||| |||| ||||||||||||||||| || ||||||||| |||    |||||| |||||| ||||||| |||||||||||||  ||||||||||    
T  3143571 aaaataaattaagtttttttgaagtattatatgatcatttatcattttgttaattaattcaattttttaaaaattattttataatgtcattaatttaaaa 3143670  T
Q  415 aagaa 419  Q
    |||||    
T  3143671 aagaa 3143675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 390 - 476
Target Start/End: Complemental strand, 13771030 - 13770944
Alignment:
Q  390 attttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaat 476  Q
    |||||||| |||||||||||||||||  | | || | |||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  13771030 attttatagtgtccgtaatttaaaaataataagtaaatcctcccctcccttcccctcctaaatcctcaatccaaacacaccctaaat 13770944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 404 - 472
Target Start/End: Original strand, 36267729 - 36267797
Alignment:
Q  404 gtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||||||||| |||  |||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  36267729 gtaatttaaaaaataaaaatgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 36267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 405 - 477
Target Start/End: Complemental strand, 39646536 - 39646464
Alignment:
Q  405 taatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaatg 477  Q
    |||||||||||| ||| |||| |||||||||||||||| |||||||||  || ||||||||||||||||||||    
T  39646536 taatttaaaaaataaaagtgattcctcccctcccttcctctcctaaaccgtcaatccaaacacaccctaaatg 39646464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 319 - 433
Target Start/End: Complemental strand, 23116413 - 23116298
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatca-ttttataatgtccgtaatttaaaaaag 417  Q
    |||| |||| ||||||  ||||||||||||||||| ||||||||||||| || || |||||| ||| || || ||||||| |||| ||||||||||||||    
T  23116413 aaaaaaaattaagtgtgattgaagtattatataatcatttatcatgttgctatttcaattttttaataaacacttttatagtgtctgtaatttaaaaaag 23116314  T
Q  418 aaaggtgagtcctccc 433  Q
    ||| || || ||||||    
T  23116313 aaaagtaagccctccc 23116298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 319 - 402
Target Start/End: Original strand, 8122235 - 8122322
Alignment:
Q  319 aaaataaataaagtgtttttgaagtatta----tataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtc 402  Q
    ||||||||| || ||||||||||||||||    ||| || ||||||||| ||||||||| |||||||||||||| |||||||||||||    
T  8122235 aaaataaattaattgtttttgaagtattaattatatgataatttatcatcttgttaattcaattttctaaaaattattttataatgtc 8122322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 403 - 472
Target Start/End: Original strand, 1051673 - 1051742
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||||||||||||||  | | ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  1051673 cgtaatttaaaaaagaaaaataaatcctctcctcccttcccctcctaaaccctcaatccaaacacaccct 1051742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 319 - 420
Target Start/End: Complemental strand, 33655261 - 33655160
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| || ||||||||||||  ||  |||| ||| |||||| ||||| ||| ||||||||||||||||| ||    
T  33655261 aaaataaattaagtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatga 33655162  T
Q  419 aa 420  Q
    ||    
T  33655161 aa 33655160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 320 - 380
Target Start/End: Complemental strand, 12670988 - 12670928
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaatttt 380  Q
    |||| ||| |||||||||||||||||||||| || ||||||||||||||||||| ||||||    
T  12670988 aaatgaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaatttt 12670928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 383 - 471
Target Start/End: Original strand, 31571625 - 31571713
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccc 471  Q
    ||||| ||| |||||  ||||||||||||||||||||| || |   |||||||| ||||||||||||||| ||| ||||||||||||||    
T  31571625 aaaaagcatgttatatggtccgtaatttaaaaaagaaaagtaaactctcccctcgcttcccctcctaaaccctcaatccaaacacaccc 31571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 337 - 472
Target Start/End: Original strand, 10315742 - 10315877
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctc 436  Q
    |||||||||||||||||  |||||| ||||  ||  |||| ||| |||||| ||||| ||| |||||||| |||||||| ||||  | | ||  || |||    
T  10315742 ttgaagtattatataatcgtttatcttgttaatatgttaaatttttaaaaaacatttcatagtgtccgtattttaaaaatgaaaaataaatcaccctctc 10315841  T
Q  437 ccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||||||||||||  ||||||||||||| ||||    
T  10315842 ccttcccctcctaaaccttccatccaaacacgccct 10315877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 31553281 - 31553182
Alignment:
Q  373 ttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||| ||| |||||| ||||| ||||||||||| ||||||||   |||| |||  |||| |||||||||||||||||||| |||||||||||||||||||    
T  31553281 ttaactttttaaaaaacatttcataatgtccgttatttaaaattaaaag-tgac-cctctcctcccttcccctcctaaac-ctccatccaaacacaccct 31553185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 469
Target Start/End: Complemental strand, 34235160 - 34235010
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||| |||||||| ||  ||  |||| ||| || ||| ||||| ||| ||||||||||||||||| ||    
T  34235160 aaaataaattaagtgtgattgaagtattatatgattgtttatcatattaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatga 34235061  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    || || | | |||||||| | ||||  |  |||| ||||||||||||||||    
T  34235060 aaagtaaattctcccctctcgtccctactcaaaccctccatccaaacacac 34235010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 405 - 475
Target Start/End: Complemental strand, 47390922 - 47390852
Alignment:
Q  405 taatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||||||||||||||| || |  ||||| ||||||||||||||||| | ||| ||||||||||||||||||    
T  47390922 taatttaaaaaagaaaagtaaaccctccactcccttcccctcctaacccctcaatccaaacacaccctaaa 47390852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 437
Target Start/End: Original strand, 48093984 - 48094102
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  || ||||||||||| || ||||||||| || ||| || |||| | ||||||  ||||||||  || ||||||||||||||||    
T  48093984 aaaataaattaagtgtggttaaagtattatatgatcatttatcattttattatttcaattctataaaaaagattttatagcgttcgtaatttaaaaaaga 48094083  T
Q  419 aaggtgagtcctcccctcc 437  Q
    || || | |||||||||||    
T  48094084 aaagtaaatcctcccctcc 48094102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 391 - 472
Target Start/End: Original strand, 47391019 - 47391100
Alignment:
Q  391 ttttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||| ||||||||||||||||| ||||    |   |||||||||||||||||| ||||| |||||||||||||||||||    
T  47391019 ttttatagtgtccgtaatttaaaaatgaaaaccaaactctcccctcccttcccctcttaaaccctccatccaaacacaccct 47391100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 383 - 474
Target Start/End: Original strand, 18795750 - 18795840
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||| ||||||||| ||| ||||||||||||||||||    || | |||||| ||||||||| |||||||||| |||||||||||| ||||    
T  18795750 aaaaaacattttatattgttcgtaatttaaaaaagaaaatcaagccttcccct-ccttccccttctaaactctcaatccaaacacactctaa 18795840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 427 - 474
Target Start/End: Complemental strand, 25887237 - 25887190
Alignment:
Q  427 tcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||||||||||||||||| ||||| ||| |||||||||||||||||    
T  25887237 tcctcccctcccttcccctcataaaccctcaatccaaacacaccctaa 25887190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 319 - 472
Target Start/End: Original strand, 25887283 - 25887436
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaa-ttttctaaaaatcattttataatgtccgtaatttaaaaaag 417  Q
    ||||||||| ||||||  ||| |||||||||| ||| |||||||| ||  ||  |||| ||||  ||||| ||||| || || | ||||||||||||| |    
T  25887283 aaaataaattaagtgtgattggagtattatatgattgtttatcatattaatatgttaacttttaaaaaaaacatttcatgattttcgtaatttaaaaatg 25887382  T
Q  418 aaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||| || |   |||||||||||||||||||||||| || || |||||||||||||    
T  25887383 aaatgtaaactctcccctcccttcccctcctaaacccttca-ccaaacacaccct 25887436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 405 - 475
Target Start/End: Original strand, 33655285 - 33655355
Alignment:
Q  405 taatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||||||||||||||| || |  |||| |||| ||||||||||||||| ||| |||||||||||| |||||    
T  33655285 taatttaaaaaagaaaagtaaaccctcgcctctcttcccctcctaaaccctcaatccaaacacactctaaa 33655355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 472
Target Start/End: Original strand, 13771101 - 13771190
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||| ||| |||||  |||||||||||||||| |||| || |   ||| |||||||||||||||||||| ||| ||| |||||||||||    
T  13771101 aaaaaacatgttatatagtccgtaatttaaaaacgaaaagtaaactctcacctcccttcccctcctaaaccctcaatctaaacacaccct 13771190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 472
Target Start/End: Complemental strand, 24970318 - 24970167
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||  ||||||| |||  ||  |||| ||| ||||||  |||| ||| | ||||||||||||||| ||    
T  24970318 aaaataaattaagtgtgattgaagtattatatgatcgtttatcaagttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatga 24970219  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || || | || |||||| ||||||||||||||| ||| |||||  |||||||||    
T  24970218 aaagtaaatcatcccct-ccttcccctcctaaa-tcttcatccgtacacaccct 24970167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 401 - 474
Target Start/End: Original strand, 34228492 - 34228565
Alignment:
Q  401 tccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||||||| |||| |||| || | ||||||||||||||| ||||||||||  || || ||||||||||||||    
T  34228492 tccgtaattttaaaatgaaaagtaaatcctcccctcccttctcctcctaaaccttcaattcaaacacaccctaa 34228565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 319 - 415
Target Start/End: Complemental strand, 22163262 - 22163167
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaa 415  Q
    ||||||||| ||||||  |||||||||||||| ||  |||||||||||  | || | | |||||||||| ||||| ||| |||||||||||||||||    
T  22163262 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaat-atgttactttctaaaaaacatttcatagtgtccgtaatttaaaaa 22163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 319 - 415
Target Start/End: Complemental strand, 22221970 - 22221875
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaa 415  Q
    ||||||||| ||||||  |||||||||||||| ||  |||||||||||  | || | | |||||||||| ||||| ||| |||||||||||||||||    
T  22221970 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaat-atgttactttctaaaaaacatttcatagtgtccgtaatttaaaaa 22221875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 477
Target Start/End: Original strand, 41008387 - 41008427
Alignment:
Q  437 ccttcccctcctaaactctccatccaaacacaccctaaatg 477  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  41008387 ccttcccctcctaaaccctgcatccaaacacaccctaaatg 41008427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 472
Target Start/End: Complemental strand, 4835550 - 4835479
Alignment:
Q  401 tccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||||||||| || ||  | |||||||||| | ||||||||| ||| ||| |||||||||||    
T  4835550 tccgtaatttaaaaaagaaaagtaagcacacccctccctttctctcctaaaccctcaatctaaacacaccct 4835479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 340 - 403
Target Start/End: Original strand, 7791831 - 7791894
Alignment:
Q  340 aagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtcc 403  Q
    ||||||||||| ||||||||||||||| ||| || ||||||| |||||  |||||||| |||||    
T  7791831 aagtattatatgattatttatcatgtttttatttcaattttcaaaaaagtattttatagtgtcc 7791894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 383 - 470
Target Start/End: Complemental strand, 37620863 - 37620776
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    ||||||||||||| | ||| | |||||| ||||  ||| ||||   ||||||||||||||||||| |||| ||| |||||||||||||    
T  37620863 aaaaatcattttacattgttcataatttgaaaataaaaagtgaactctcccctcccttcccctcccaaaccctcaatccaaacacacc 37620776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 469
Target Start/End: Original strand, 42306484 - 42306571
Alignment:
Q  382 taaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    |||||| ||||| ||| ||||||||||||||||| ||||  | |  | |||||||  |||||||||||||| ||| ||||||||||||    
T  42306484 taaaaaacatttcatagtgtccgtaatttaaaaatgaaaattaaaccatcccctcaattcccctcctaaaccctcaatccaaacacac 42306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 375 - 472
Target Start/End: Complemental strand, 12670630 - 12670532
Alignment:
Q  375 aattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctccc-ctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||| ||| || ||||||  || ||||||||||||||||| ||  |||||||| |||  ||||| ||||||||||| |||| ||| |||||||    
T  12670630 aattttctaacaattatattataaaatctgtaatttaaaaaagaaaagtatgtcctccctctcaattcccttcctaaactctgcatctaaagacaccct 12670532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 319 - 437
Target Start/End: Original strand, 17852962 - 17853079
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||| ||||||||| ||  ||||||||||||||| ||||  ||| |||||| | ||| ||| ||  ||||||||||||| ||    
T  17852962 aaaataaattaagtgtgattgaggtattatatgatcgtttatcatgttgttattttatctttttaaaaa-cttttcatagtgctcgtaatttaaaaatga 17853060  T
Q  419 aaggtgagtcctcccctcc 437  Q
    || || || ||||||||||    
T  17853061 aaagtaagccctcccctcc 17853079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 428 - 474
Target Start/End: Original strand, 28074308 - 28074354
Alignment:
Q  428 cctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||||| |||||| ||||||||| ||| |||||||||||||||||    
T  28074308 cctccccttccttcctctcctaaaccctcaatccaaacacaccctaa 28074354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 428 - 474
Target Start/End: Complemental strand, 40282241 - 40282195
Alignment:
Q  428 cctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||| ||||||||||||||||||| ||| ||||||||| |||||||    
T  40282241 cctcctctcccttcccctcctaaaccctcaatccaaacataccctaa 40282195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 470
Target Start/End: Original strand, 23116425 - 23116470
Alignment:
Q  425 agtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    |||||||||||||||||||||| ||||| |||  ||||||||||||    
T  23116425 agtcctcccctcccttcccctcgtaaaccctcggtccaaacacacc 23116470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 6e-61; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 270 - 474
Target Start/End: Complemental strand, 8815343 - 8815139
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    ||||||||||||||||||||| ||||| ||||  ||||||||       |||  || ||||||||||||||||||||||||||| |||||||||||||||    
T  8815343 agggttcacttttaatttttaaattacgaacactgtaaaatgttttttcaaataaattaaagtgtttttgaagtattatataatcatttatcatgttgtt 8815244  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||||| || |||| || |||| ||||||||||||||| ||||||||||||||||    
T  8815243 gattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaagtcatcacctctcttcccctcctaaaccctccatccaaacacac 8815144  T
Q  470 cctaa 474  Q
    |||||    
T  8815143 cctaa 8815139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 319 - 474
Target Start/End: Original strand, 43732778 - 43732933
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||||||||||||||||||||| || ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  43732778 aaaataaattaagtgtttttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttataatgtccgtaatttaaaaaaga 43732877  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    || || |  ||||||||||||||||||||||||| |||||||||||||||||||||    
T  43732878 aaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccctaa 43732933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 270 - 474
Target Start/End: Complemental strand, 12022345 - 12022140
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||| ||||||||| |||||| |||||  |||| ||||||||       ||||||||| |||||||||||||||||||||| || |||||||||||||||    
T  12022345 agggctcacttttattttttaaattacggacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgtt 12022246  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcct-aaactctccatccaaacaca 468  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||| || || |||||||||||||||||| || |||| |||||||| ||||||    
T  12022245 aattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaagtaagccctcccctcccttccccttctcaaaccctccatcctaacaca 12022146  T
Q  469 ccctaa 474  Q
    ||||||    
T  12022145 ccctaa 12022140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 273 - 472
Target Start/End: Original strand, 30365175 - 30365374
Alignment:
Q  273 gttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaat 372  Q
    |||||||||||||||||| ||||| |||||| ||||||        | ||||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  30365175 gttcacttttaatttttaaattacgaacaacataaaatatttttttagaataaattaagtgtttttgaagtgttatataatcatttatcatgttgttaat 30365274  T
Q  373 ttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    | ||||||||||||||||||| |||||||| ||||||||||||||||| |  || ||||||||||||| |||| |||||  |||||||||||||||||||    
T  30365275 tcaattttctaaaaatcatttcataatgtctgtaatttaaaaaagaaaaggaagccctcccctcccttacccttctaaatcctccatccaaacacaccct 30365374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 320 - 469
Target Start/End: Original strand, 16024246 - 16024394
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||||||| |||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  16024246 aaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaattt-aaaaagaa 16024344  T
Q  420 aggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    | || |   |||||||||||||||||||||||  ||||||||||||||||    
T  16024345 aagtaaactctcccctcccttcccctcctaaatcctccatccaaacacac 16024394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 272 - 475
Target Start/End: Complemental strand, 40633189 - 40632993
Alignment:
Q  272 ggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaa 371  Q
    |||||| |||||||||||  ||||| ||||||||||||||       ||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||    
T  40633189 ggttcaattttaatttttcaattacgaacaacgtaaaatgttgttttaaaataaattaagtgtttttgaaatattatacaatcatttatcatgttgttaa 40633090  T
Q  372 tttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccc 471  Q
    || |||||||||||||| |||||||||||||||||||||||||       || || ||||| ||||||||||||||||||| |||||| |||||||||||    
T  40633089 ttcaattttctaaaaattattttataatgtccgtaatttaaaa-------gtaagccctcctctcccttcccctcctaaaccctccattcaaacacaccc 40632997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 320 - 474
Target Start/End: Original strand, 34196402 - 34196553
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||||||||| |||||||||||||||||||| ||  |||||| ||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||    
T  34196402 aaataaataa-gtgtttttgaagtattatatgatcgtttatcttgttgttaattcaattttctaaaaatcattttataatgtctgtaattt-aaaaagaa 34196499  T
Q  420 aggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    | || || ||||||| ||||||||||||||||| |||||||||||| ||||||||    
T  34196500 aagtaagccctcccc-cccttcccctcctaaaccctccatccaaacgcaccctaa 34196553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 6453275 - 6453408
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    |||||| || |||||||||||||||||||||| |||| |||||||||| |||||| ||||||||||||||||||||||||||   |||||||||||| ||    
T  6453275 aaaatatattaagtgtttttgaagtattatatgattacttatcatgttattaattcaattttctaaaaatcattttataatgattgtaatttaaaaagga 6453374  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaac 452  Q
    || |  ||||||||||| ||||||||| ||||||    
T  6453375 aaagcaagtcctccccttccttccccttctaaac 6453408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 29937614 - 29937742
Alignment:
Q  340 aagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctccct 439  Q
    ||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| ||  || || |||| ||     
T  29937614 aagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccataattttaaaaagaaaagtatgttcttcccttccc 29937713  T
Q  440 tcccctcctaaactctccatccaaacaca 468  Q
    ||| ||| ||||| |||||||||||||||    
T  29937714 tccactcttaaaccctccatccaaacaca 29937742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 319 - 420
Target Start/End: Complemental strand, 20472845 - 20472744
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||||||||||||||||||||| || || |||||| ||||||||| |||||||||||| | ||||||||||||| |||||||||||||||    
T  20472845 aaaataaatcaagtgtttttgaagtattatatgatcatatatcatattgttaattcaattttctaaaatttattttataatgtctgtaatttaaaaaaga 20472746  T
Q  419 aa 420  Q
    ||    
T  20472745 aa 20472744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 279 - 415
Target Start/End: Complemental strand, 8671987 - 8671849
Alignment:
Q  279 ttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttat--catgttgttaatttaa 376  Q
    ||||| |||||| |||||||| || ||||||||       ||||||||| |||| ||||||||||||||||| || |||| |  ||| ||||||||| ||    
T  8671987 ttttattttttaaattacaaataatgtaaaatgtatttttaaaataaattaagtatttttgaagtattatatgatcatttttttcatattgttaattcaa 8671888  T
Q  377 ttttctaaaaatcattttataatgtccgtaatttaaaaa 415  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8671887 ttttctaaaaatcattttataatgtccgtaatttaaaaa 8671849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 319 - 437
Target Start/End: Original strand, 9933332 - 9933450
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||| |||||||| |||||||| || ||||||||||||||||||| |||||| | ||||||||||||||||||||  | |||||||||||    
T  9933332 aaaataaattaagtatttttgaaatattatatgatcatttatcatgttgttaattcaatttttttaaaatcattttataatgtccaaattttaaaaaaga 9933431  T
Q  419 aaggtgagtcctcccctcc 437  Q
    || || |  ||||||||||    
T  9933432 aaagtaaaccctcccctcc 9933450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 275 - 472
Target Start/End: Original strand, 39449351 - 39449543
Alignment:
Q  275 tcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaattt 374  Q
    ||||||||| |||||| ||||| ||||| || |||||       || |||||| || ||||||||||||||||||| || ||| |||||||||||||||     
T  39449351 tcacttttattttttaaattacgaacaatgtgaaatgtctttttaagataaattaactgtttttgaagtattatatgatcattaatcatgttgttaattc 39449450  T
Q  375 aattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||| ||||||| ||||||||| |||  ||| ||||||||| || || ||     ||||||| |||||||||||||||||   |||||||||||||    
T  39449451 aattttttaaaaataattttataacgtctttaaattaaaaaaggaatgtaag-----ccctcccctcccctcctaaactctcttcccaaacacaccct 39449543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 321 - 474
Target Start/End: Original strand, 31738516 - 31738669
Alignment:
Q  321 aataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaatt-ttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    ||||||| ||||||  |||||||||||||| || ||||||||||||  ||  |||| | ||| |||||| |||||||| ||||||||||||||||| |||    
T  31738516 aataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaat-attttatagtgtccgtaatttaaaaatgaa 31738614  T
Q  420 aggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |  | |  ||||||||  ||||||||||||||| |||||||||||||||||||||    
T  31738615 atttaaaccctcccctttcttcccctcctaaaccctccatccaaacacaccctaa 31738669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 383 - 472
Target Start/End: Original strand, 12022298 - 12022387
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||| ||||||| | |||||||||||||||||| ||| ||||| |||||||||| |||||||||||||| ||| |||||||||||||||    
T  12022298 aaaaaacattttacattgtccgtaatttaaaaaataaaagtgagccctcccctcctttcccctcctaaaccctcaatccaaacacaccct 12022387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 320 - 472
Target Start/End: Complemental strand, 24243199 - 24243050
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||| ||| ||||||  |||||||||||||| || |||||||||||| ||| || |||||| |||||  ||||||||| |||| ||||||| |||| |||    
T  24243199 aaattaattaagtgtgattgaagtattatatgatcatttatcatgttattatttcaatttt-taaaagacattttatagtgtc-gtaatttcaaaatgaa 24243102  T
Q  420 aggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    | || |||| |||| ||||||||| || |||||||||||||||||||||||||    
T  24243101 aagtaagtcatcccttcccttccc-tcttaaactctccatccaaacacaccct 24243050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 321 - 410
Target Start/End: Complemental strand, 9434450 - 9434360
Alignment:
Q  321 aataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatca-ttttataatgtccgtaattt 410  Q
    ||||||| ||||| |||||||||||||||| || ||||||||||||||||||| |||||| ||||||| | ||||||||| ||||||||||    
T  9434450 aataaattaagtggttttgaagtattatattatcatttatcatgttgttaattcaattttttaaaaattatttttataatatccgtaattt 9434360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 273 - 396
Target Start/End: Original strand, 43826377 - 43826500
Alignment:
Q  273 gttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaat 372  Q
    ||||| ||||| ||| || ||||| ||||| ||||||||       ||||||| | |||||||||||||||||| ||| || ||||||||||||||||||    
T  43826377 gttcatttttattttgtaaattacgaacaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaat 43826476  T
Q  373 ttaattttctaaaaatcattttat 396  Q
    | |||||||||||||| |||||||    
T  43826477 tcaattttctaaaaattattttat 43826500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 383 - 472
Target Start/End: Complemental strand, 43732768 - 43732679
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||| ||||||| | |||  ||||||||||||| ||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  43732768 aaaaaacattttacattgttagtaatttaaaaaataaaagtgagtcctcctctcccttcccctcctaaaccctcaatccaaacacaccct 43732679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 319 - 472
Target Start/End: Complemental strand, 31543225 - 31543072
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| |   ||||| |||||  ||  |||| ||| | |||| ||||| ||| | ||||||||||||||| ||    
T  31543225 aaaataaattaagtgtgattgaagtattatatgaccgtttatgatgttaatatgttaacttttttaaaaacatttcatagtttccgtaatttaaaaatga 31543126  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || || |  ||||||||||||||||||| ||||| ||||||||||||| |||||    
T  31543125 aaagtaaaccctcccctcccttcccctcttaaaccctccatccaaacataccct 31543072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 400 - 477
Target Start/End: Original strand, 31543244 - 31543321
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaatg 477  Q
    |||| |||||||||||||||| || |  ||||||||||||||||||||||||| ||| ||| ||||||||||||||||    
T  31543244 gtccataatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatcgaaacacaccctaaatg 31543321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 402 - 474
Target Start/End: Complemental strand, 2248522 - 2248450
Alignment:
Q  402 ccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||||||||||||| ||  |||   |||||||||||||||||||||||||||| |||||||||||||||||    
T  2248522 ccgtaatttaaaaaaggaaattgaactctcccctcccttcccctcctaaactctcaatccaaacacaccctaa 2248450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 319 - 472
Target Start/End: Complemental strand, 41103659 - 41103504
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaattt--aaaaaa 416  Q
    ||||||||| ||||||  |||||||||||||| ||  ||||||||||| ||  ||||||||| | |||| | ||| ||| ||||| ||||||  |||||     
T  41103659 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttattgttttaatttttttaaaaacgtttcatagtgtccataatttttaaaaac 41103560  T
Q  417 gaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||    |  ||||||||| ||||||||||||||| |||||||||||||||||||    
T  41103559 gaaaatcaaaccctcccctctcttcccctcctaaaccctccatccaaacacaccct 41103504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 383 - 470
Target Start/End: Complemental strand, 16024242 - 16024155
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    ||||||||||||||| ||| |||||||||||||  |||  ||||  ||||||||||||||| |||||||| ||| |||||||||||||    
T  16024242 aaaaatcattttatattgttcgtaatttaaaaacaaaaactgagctctcccctcccttcccttcctaaaccctcaatccaaacacacc 16024155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 481
Target Start/End: Original strand, 34634305 - 34634396
Alignment:
Q  390 attttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaatgagaa 481  Q
    |||| ||| |||||||||||||||||  |||  |||  |||| | |||||||||||||||||||||||||||||||||||||| ||| ||||    
T  34634305 atttcatagtgtccgtaatttaaaaataaaaaatgaaccctcacatcccttcccctcctaaactctccatccaaacacacccttaataagaa 34634396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 383 - 472
Target Start/End: Original strand, 8815296 - 8815385
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||| ||||||| | ||| |||||||||||||  ||| ||||  |||||||||||| |||||||||||| ||| |||||||||||||||    
T  8815296 aaaaaacattttacagtgttcgtaatttaaaaattaaaagtgaaccctcccctccctccccctcctaaaccctcaatccaaacacaccct 8815385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 337 - 474
Target Start/End: Original strand, 11785635 - 11785772
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctc 436  Q
    ||||||||||||||  || |||||||||||  ||   ||| ||| ||||||  |||| ||||||||||||||||||||| ||||    |  |||||| ||    
T  11785635 ttgaagtattatatgtttgtttatcatgttaatatgctaactttttaaaaaatatttcataatgtccgtaatttaaaaatgaaaatcaaaccctcccttc 11785734  T
Q  437 ccttcccctcctaaactctccatccaaacacaccctaa 474  Q
     ||| ||||||||||| |||||||||||||||||||||    
T  11785735 tcttaccctcctaaaccctccatccaaacacaccctaa 11785772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 30479870 - 30479721
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| || ||||||||  ||  ||  |||| ||| |||||  ||||| ||| |||| |||||||||||| ||    
T  30479870 aaaataaatcaagtgtgattgaagtattatattatcatttatcaccttaatatgttaactttttaaaagacatttcatagtgtctgtaatttaaaaatga 30479771  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacaca 468  Q
    || ||||   ||||||||| | |||||||||||  |||||||||||||||    
T  30479770 aaagtgaactctcccctccatccccctcctaaatcctccatccaaacaca 30479721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 400 - 472
Target Start/End: Original strand, 1027020 - 1027092
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||||||||||||||||| ||||  ||| |||||||||||| |||||||| ||  |||||||||||||||    
T  1027020 gtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccttcctaaacccttaatccaaacacaccct 1027092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 319 - 466
Target Start/End: Original strand, 36308934 - 36309081
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatc-attttataatgtccgtaatttaaaaaag 417  Q
    ||||||||  ||||||  |||||||||||||| ||| |||||||||||  ||  || | ||| |||||||  |||| | ||||| ||||||||||| | |    
T  36308934 aaaataaactaagtgtgattgaagtattatatgattgtttatcatgttaatatgtttacttt-taaaaatatatttcacaatgtacgtaatttaaagatg 36309032  T
Q  418 aaaggtgagtcctcccctcccttcccctcctaaactctccatccaaaca 466  Q
    ||| || |  ||||||||||||||||||||||||| |||||||||||||    
T  36309033 aaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaaca 36309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 469
Target Start/End: Original strand, 16653040 - 16653190
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||  |||||  ||||  ||  |||| ||| | |||| ||||| ||||||||||||||||||||| ||    
T  16653040 aaaataaatcaagtgtgattgaagtattatatgatcgtttattttgttaatatgttaactttttcaaaaacatttcataatgtccgtaatttaaaaatga 16653139  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    ||  | |  |||| |||||||||||||| |||||  | |||||||||||||    
T  16653140 aaattaaaccctctcctcccttcccctcttaaaccattcatccaaacacac 16653190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 403 - 468
Target Start/End: Original strand, 7394636 - 7394701
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacaca 468  Q
    |||||||||||||| ||| ||||  | ||||||||||||||||||||||| ||| |||||||||||    
T  7394636 cgtaatttaaaaaataaaagtgaaccatcccctcccttcccctcctaaaccctcaatccaaacaca 7394701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 435 - 475
Target Start/End: Complemental strand, 3726900 - 3726860
Alignment:
Q  435 tcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  3726900 tcccttcccctcctaaaccctccatccaaacacaccctaaa 3726860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 448
Target Start/End: Original strand, 30581985 - 30582033
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcct 448  Q
    ||||||||||||||||||||| || || |||||||||||||||||||||    
T  30581985 gtccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcct 30582033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 383 - 474
Target Start/End: Original strand, 2481934 - 2482019
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||| ||||||||| |||| | |||||||||| ||||||| ||     ||||||||||||||||||||| ||||||||||||| |||||||    
T  2481934 aaaaaacattttatagtgtcggaaatttaaaaa-gaaaggtaag-----ccctcccttcccctcctaaaccctccatccaaacataccctaa 2482019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 1281215 - 1281149
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaaca 466  Q
    ||||||||||||||||||||| || |  |||| | |||||||||||||||||| ||| |||||||||    
T  1281215 gtccgtaatttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaatccaaaca 1281149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 407 - 472
Target Start/End: Complemental strand, 13405041 - 13404976
Alignment:
Q  407 atttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||| || | | ||||| |||||||||||||||||| ||| |||||| ||||||||    
T  13405041 atttaaaaaagaaaagtaatttctcccatcccttcccctcctaaaccctcaatccaaccacaccct 13404976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 369
Target Start/End: Original strand, 27483652 - 27483701
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||||||||||||||| |||||||||||||| || |||||||||| ||||    
T  27483652 aaataaataaagtgttattgaagtattatatgataatttatcatgctgtt 27483701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 475
Target Start/End: Complemental strand, 30365212 - 30365127
Alignment:
Q  390 attttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||||||  ||| |||||||||||||  ||| ||||   ||||||||| ||| |||||||||| ||| ||||||||||||||||||    
T  30365212 attttatgttgttcgtaatttaaaaattaaaagtgaactctcccctcctttctcctcctaaaccctcaatccaaacacaccctaaa 30365127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 322 - 442
Target Start/End: Original strand, 1281237 - 1281357
Alignment:
Q  322 ataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaag 421  Q
    |||||| ||||||  |||||||||||||| ||  ||||| |||||  ||  |||| ||| ||||||  |||| ||| ||||||||||||||||| ||||     
T  1281237 ataaatcaagtgtggttgaagtattatattatcgtttattatgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaa 1281336  T
Q  422 gtgagtcctcccctcccttcc 442  Q
     | | ||||||||||||||||    
T  1281337 ctaaatcctcccctcccttcc 1281357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 404 - 476
Target Start/End: Original strand, 8671970 - 8672042
Alignment:
Q  404 gtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaat 476  Q
    ||||||||||||| |||  | |||| |||||| ||||||||| |||||  ||| |||||||||||||||||||    
T  8671970 gtaatttaaaaaataaaattaagtcatcccctaccttccccttctaaatcctcaatccaaacacaccctaaat 8672042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 7979212 - 7979137
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    ||||||||||||||||||||| || |   |||| ||||||||| || |||||| ||| ||||||||||| ||||||    
T  7979212 gtccgtaatttaaaaaagaaaagtaaactctcctctcccttcctcttctaaaccctcaatccaaacacatcctaaa 7979137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 9718614 - 9718531
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
    |||||||||||||| ||| |||||||||||  ||   ||| ||| |||||| ||||| ||| ||||||||||||||||| ||||    
T  9718614 ttgaagtattatatgattgtttatcatgttaatatgctaactttttaaaaaccatttcatagtgtccgtaatttaaaaatgaaa 9718531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 472
Target Start/End: Original strand, 9718656 - 9718723
Alignment:
Q  405 taatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||||| || |    |||||||||||| |||||||||| ||| |||||||||||||||    
T  9718656 taatttaaaaaagaaaagtaaactttcccctcccttctcctcctaaaccctcaatccaaacacaccct 9718723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 366
Target Start/End: Original strand, 26167847 - 26167894
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgtt 366  Q
    ||||||||||||| ||| |||||||||||||| || ||||||||||||    
T  26167847 aaaataaataaagagttattgaagtattatatgatcatttatcatgtt 26167894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 414
Target Start/End: Original strand, 30664452 - 30664547
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaa 414  Q
    ||||||||| ||||||  ||||||||||||||||   |||||||| ||  ||  |||| ||| ||||||  ||||| |||||||||||||||||||    
T  30664452 aaaataaattaagtgtgattgaagtattatataaccgtttatcatattaatatgttaactttttaaaaaatattttgtaatgtccgtaatttaaaa 30664547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 432 - 474
Target Start/End: Complemental strand, 2413004 - 2412962
Alignment:
Q  432 ccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||| ||||||||||||| |||||||||||||||| ||||    
T  2413004 ccctcccctcccctcctaaaccctccatccaaacacactctaa 2412962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 405 - 475
Target Start/End: Original strand, 7503131 - 7503201
Alignment:
Q  405 taatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    ||||||||||| |||| || |  ||||||||||| |||||||| |||  ||| ||||||||||||||||||    
T  7503131 taatttaaaaacgaaaagtaaaccctcccctcccctcccctcccaaagcctcaatccaaacacaccctaaa 7503201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 403 - 469
Target Start/End: Original strand, 20472867 - 20472933
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    |||||||||||||| ||| ||||||||| || |||||| |||| ||||||  || ||||||||||||    
T  20472867 cgtaatttaaaaaataaaagtgagtccttccttccctttcccttctaaaccttcaatccaaacacac 20472933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 464
Target Start/End: Complemental strand, 11575559 - 11575415
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  || ||||||||||| ||  |||||||||||  ||  |||| ||| |||||| ||||| ||| | ||| |||||||| || ||    
T  11575559 aaaataaattaagtgtgattaaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtatccttaatttaagaatga 11575460  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaa 464  Q
    || || |  ||| ||||||||||| ||||||||  |||||||||||    
T  11575459 aaagtaaaccct-ccctcccttcctctcctaaatcctccatccaaa 11575415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 420
Target Start/End: Original strand, 28083833 - 28083934
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  ||| |||||||||| ||| ||||||||||||  |  |||| | | |||||| ||| | ||| | ||||||||||||||||||    
T  28083833 aaaataaattaagtgtgattggagtattatatgattgtttatcatgttgacatgttaactctttaaaaaacatatcatagtatccgtaatttaaaaaaga 28083932  T
Q  419 aa 420  Q
    ||    
T  28083933 aa 28083934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 6e-58; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 270 - 472
Target Start/End: Original strand, 34641034 - 34641234
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||| ||||||||| |||||| ||||| ||||| |||||| |       ||||||||| |||||||||||||||||||||| || |||||||||||||||    
T  34641034 agggctcacttttattttttaaattacgaacaatgtaaaaggattttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgtt 34641133  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||| ||||||||||||||||    
T  34641134 aattcaattttctaaa--tcattttataatgtccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacacac 34641231  T
Q  470 cct 472  Q
    |||    
T  34641232 cct 34641234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 273 - 475
Target Start/End: Original strand, 24253767 - 24253969
Alignment:
Q  273 gttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaat 372  Q
    |||||||||||||||||| ||||  | ||| |||||||        ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  24253767 gttcacttttaatttttaaattatgagcaatgtaaaataattttttaaaataaattaagtgtttttgaagtgttatataatcatttatcatgttgttaat 24253866  T
Q  373 ttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    | || ||||||||| ||||||||||||||||||||||||||||||||| || | |||| |||||||||||||| |||||| |||||||||||||||||||    
T  24253867 tcaactttctaaaactcattttataatgtccgtaatttaaaaaagaaaagtaaatccttccctcccttccccttctaaaccctccatccaaacacaccct 24253966  T
Q  473 aaa 475  Q
    |||    
T  24253967 aaa 24253969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 275 - 475
Target Start/End: Original strand, 26135844 - 26136044
Alignment:
Q  275 tcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaattt 374  Q
    ||||||||| |||||| ||||  ||||| ||||||||       ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||     
T  26135844 tcacttttattttttaaattatgaacaatgtaaaatgttttttaaaaataaattaagtgtttttgaagtattatataattatttatcatattgttaattc 26135943  T
Q  375 aattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||| || |  ||||| ||||||||||||||||||| |||||| ||| |||||| |||    
T  26135944 aattttcaaaaaattattttataatgtccgtaatttaaaaaagaaaagtaaaccctccactcccttcccctcctaaaccctccattcaatcacaccttaa 26136043  T
Q  475 a 475  Q
    |    
T  26136044 a 26136044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 270 - 475
Target Start/End: Complemental strand, 10943816 - 10943611
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    ||||||||||||||||||||| ||||| ||||| | ||||||       ||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  10943816 agggttcacttttaatttttaaattacgaacaatgcaaaatgtttttttaaaataaattaagtgtttttgaagtattatataattatttattatgttgtt 10943717  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    |||| ||||||||||||||||||||||||| ||  ||||||||||||||||  | | || || ||||| |||||||| ||||| ||||||||||||| ||    
T  10943716 aattcaattttctaaaaatcattttataatatctataatttaaaaaagaaaattaaatcttctcctcctttcccctcttaaaccctccatccaaacatac 10943617  T
Q  470 cctaaa 475  Q
    | ||||    
T  10943616 cataaa 10943611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 270 - 472
Target Start/End: Complemental strand, 8432461 - 8432261
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||||||| |||||||||||| | ||| ||||| | ||||||       ||||| ||| ||||||||||||||||||||| |||||||||||||||||||    
T  8432461 agggttcaattttaatttttaaactacgaacaatgaaaaatgtttttttaaaatgaattaagtgtttttgaagtattataaaattatttatcatgttgtt 8432362  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    |||| |||||| ||||||||||||||||||||| ||||||  ||||| ||| || |||||||||||| ||||||||| ||||| |||||| |||||||||    
T  8432361 aattcaattttgtaaaaatcattttataatgtctgtaatt--aaaaaaaaaagtaagtcctcccctctcttcccctcgtaaaccctccattcaaacacac 8432264  T
Q  470 cct 472  Q
    |||    
T  8432263 cct 8432261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 319 - 475
Target Start/End: Original strand, 44412452 - 44412608
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||||||| ||||||| ||||||||||||| | ||| |||||||||||||| |    
T  44412452 aaaataaattaagtgtttttgaagtattatatgatgatttatcatgttgttaattcaattttcaaaaaatcattttacattgttcgtaatttaaaaaata 44412551  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    || |||||||||||||||||||||||||  ||||  || ||||||||||||| ||||    
T  44412552 aaagtgagtcctcccctcccttcccctcacaaaccatcaatccaaacacaccttaaa 44412608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 270 - 420
Target Start/End: Original strand, 40858607 - 40858757
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||| ||||||||| |||||| ||||| ||||| ||||||||       |||||||||  ||||||||||||||||||||| || |||||||||||||||    
T  40858607 agggctcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaatttagtgtttttgaagtattatatgatcatttatcatgttgtt 40858706  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
    |||| ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  40858707 aattcaattttcaaaagatcattttataatgtccgtaatttaaaaaagaaa 40858757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 341 - 468
Target Start/End: Original strand, 55428492 - 55428619
Alignment:
Q  341 agtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctccctt 440  Q
    |||||||||| || |||||||| |||||||||| ||||||||||||||||| || |||||||||||||||||| |||||| || | || |||||||||||    
T  55428492 agtattatatgatcatttatcacgttgttaattcaattttctaaaaatcatcttgtaatgtccgtaatttaaagaagaaaagtaaatcatcccctccctt 55428591  T
Q  441 cccctcctaaactctccatccaaacaca 468  Q
    |||||||||||| ||| |||||||||||    
T  55428592 cccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 319 - 410
Target Start/End: Original strand, 42772123 - 42772214
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaattt 410  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  42772123 aaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttcaaaaaatcattttataatgtccgtaattt 42772214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 319 - 420
Target Start/End: Complemental strand, 17474359 - 17474258
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||||||||||||||||||| | |||||||||||| ||||||||| ||||||  |||||| |||||||||||||||||||||||||||||    
T  17474359 aaaataaattaagtgtttttgaagtattatttgattatttatcatattgttaattcaatttttaaaaaattattttataatgtccgtaatttaaaaaaga 17474260  T
Q  419 aa 420  Q
    ||    
T  17474259 aa 17474258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 270 - 416
Target Start/End: Original strand, 41414120 - 41414266
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||| ||||||||| |||||| ||||  ||||| ||||||||       ||||||||| ||| |||||||||||||||||| || |||||||||||||||    
T  41414120 agggctcacttttattttttaaattatgaacaaggtaaaatgtttttttaaaataaatcaagcgtttttgaagtattatatgatcatttatcatgttgtt 41414219  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaa 416  Q
    || | ||||||||||||||||||||||||||||| | ||||||||||    
T  41414220 aactcaattttctaaaaatcattttataatgtccctgatttaaaaaa 41414266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 275 - 420
Target Start/End: Original strand, 48683659 - 48683805
Alignment:
Q  275 tcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatca-tgttgttaatt 373  Q
    ||||||||| || ||| ||||| ||||| ||||||||       ||||||||| ||||||||||||| |||||||| || |||||||| |||||||||||    
T  48683659 tcacttttatttcttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaaatattatatgatcatttatcaatgttgttaatt 48683758  T
Q  374 taattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
     ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  48683759 caatttcctaaaaatcattttataatgttcgtaatttaaaaaagaaa 48683805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 319 - 478
Target Start/End: Original strand, 36727268 - 36727425
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||||||| | |    
T  36727268 aaaataaataa-gtgtttttgaagtattatatgataatttatcatgttgttaagttaattttcttaaaattattttataatgttcgtaatttaaaagata 36727366  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaatga 478  Q
    || |  |||  | |||| ||||||| || ||||| ||||||||||||||| ||| |||||    
T  36727367 aaaggaagtttttccct-ccttcccttcttaaaccctccatccaaacacatccttaatga 36727425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 270 - 395
Target Start/End: Original strand, 46978469 - 46978594
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    ||||||||||||||||||||| ||||| |||   ||||||||       ||||||||| || |||||||||||||||||||||| |||||||||||||||    
T  46978469 agggttcacttttaatttttaaattacgaacggtgtaaaatgtttttttaaaataaattaaatgtttttgaagtattatataatcatttatcatgttgtt 46978568  T
Q  370 aatttaattttctaaaaatcatttta 395  Q
    |||| |||||| ||||||||||||||    
T  46978569 aattaaattttataaaaatcatttta 46978594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 320 - 420
Target Start/End: Complemental strand, 18086133 - 18086032
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattattt-atcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    |||||||| |||||||||||||||||| ||| || |||| || |||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  18086133 aaataaattaagtgtttttgaagtattttatgatcattttattatgttgttaattcaattttctaaaaaacattttataatgtctgtaatttaaaaaaga 18086034  T
Q  419 aa 420  Q
    ||    
T  18086033 aa 18086032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 319 - 415
Target Start/End: Complemental strand, 42699765 - 42699669
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaa 415  Q
    ||||||||| |||||||||||||||||||||| || ||||||||| ||| ||||| |||||||||||| | |||||||||||||| |||||||||||    
T  42699765 aaaataaattaagtgtttttgaagtattatatgatcatttatcatattgataattcaattttctaaaatttattttataatgtccataatttaaaaa 42699669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 319 - 414
Target Start/End: Complemental strand, 21090224 - 21090129
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaa 414  Q
    ||||||||| |||||||||||||||||||||| || || |||||||||||||||| ||||||| ||||||| ||||||||| || |||||||||||    
T  21090224 aaaataaattaagtgtttttgaagtattatatgataatatatcatgttgttaattcaattttcaaaaaatcgttttataatatctgtaatttaaaa 21090129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 275 - 472
Target Start/End: Complemental strand, 16884168 - 16883974
Alignment:
Q  275 tcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaattt 374  Q
    ||||||||| ||||||  |||| ||||| ||||||||       ||||||||| |||||||||||||||||||||| || ||||||||||||||| |||     
T  16884168 tcacttttattttttaagttacgaacaatgtaaaatgtctttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgtt-attc 16884070  T
Q  375 aattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||| ||||| |  |||||| || |  |||| |||||||||||| || || |||||||| ||||||||  |||||| |||  ||||||||||||||    
T  16884069 aattttttaaaattttttttat-atatttgtaaattaaaaaagaaatgtaagccctccccttccttcccc-actaaaccctctttccaaacacaccct 16883974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 319 - 475
Target Start/End: Complemental strand, 41110474 - 41110318
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||| |||||||||||  ||  |||| ||| || |||  |||| ||| ||||||||||||||||| ||    
T  41110474 aaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaatatttcatagtgtccgtaatttaaaaatga 41110375  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    || || |  | || |||||||||||||||||||  ||||||||||||||||| ||||    
T  41110374 aaagtaaaccttctcctcccttcccctcctaaatcctccatccaaacacaccataaa 41110318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 319 - 474
Target Start/End: Original strand, 24560308 - 24560463
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| || |||  |||||||||||||| ||  |||||||||||  ||  |||| ||| |||||| ||||| ||| |||| |||||||||||| ||    
T  24560308 aaaataaattaaatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtcggtaatttaaaaatga 24560407  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    || || |   ||||| ||| |||||||||||||| |||||||||||||||||||||    
T  24560408 aaagtaaactctcccatccgttcccctcctaaaccctccatccaaacacaccctaa 24560463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 400 - 477
Target Start/End: Original strand, 220569 - 220646
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaatg 477  Q
    ||||||||||||||||||||| || | | ||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  220569 gtccgtaatttaaaaaagaaaagtaaattctcccctcccttctcctcctaaaccctccatccaaacagaccctaaatg 220646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 319 - 475
Target Start/End: Complemental strand, 18654753 - 18654597
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaatt-ttctaaaaatcattttataatgtccgtaatttaaaaaag 417  Q
    ||||||||| ||||||  |||||||||||||| || ||||||||||||  ||  |||| | ||| |||||| ||||||||  |||||||||||||||| |    
T  18654753 aaaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaat-attttatagggtccgtaatttaaaaatg 18654655  T
Q  418 aaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||  | |  |||||| || ||| ||||||||||| ||||||||||||||||||||||    
T  18654654 aaatctaaaccctcccatctctttccctcctaaaccctccatccaaacacaccctaaa 18654597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 355 - 420
Target Start/End: Complemental strand, 54985810 - 54985745
Alignment:
Q  355 atttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
    ||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||    
T  54985810 atttatcatattgttaattcaattttctaaaaatcaatttataatgtccgtaatttaaaaacgaaa 54985745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 319 - 470
Target Start/End: Complemental strand, 16275858 - 16275707
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  ||||||||||||||  || |||||||||||  ||| |||| ||| || ||| ||||| |||||||||| |||||||||| ||    
T  16275858 aaaataaatcaagtgtgattgaagtattatatggttgtttatcatgttaataagttaactttttataaaacatttcataatgtccgaaatttaaaaatga 16275759  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    |  ||||   |||||||||||| ||||  |||||  ||||||||||||||||    
T  16275758 atagtgaactctcccctccctttcccttataaaccatccatccaaacacacc 16275707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 28582681 - 28582757
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaat 476  Q
    ||||||||||||||||||||| || |  ||||||||||||||||||||||||  |||  ||||||||||||||||||    
T  28582681 gtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaatcctcagtccaaacacaccctaaat 28582757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 42772112 - 42772046
Alignment:
Q  404 gtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| |||||  || |||||||||||||    
T  42772112 gtaatttaaaaaataaaagtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 42772046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 403 - 472
Target Start/End: Complemental strand, 44412430 - 44412361
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||  |||  |||||||||||||| ||||||||||||||| ||| || ||||||||||||    
T  44412430 cgtaatttaaaaataaaaaatgagtcctcccctctcttcccctcctaaaccctcaattcaaacacaccct 44412361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 405 - 469
Target Start/End: Original strand, 21090248 - 21090312
Alignment:
Q  405 taatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    |||||||||||| ||| |||||||||| |||||||||| |||||||||  || ||||||||||||    
T  21090248 taatttaaaaaataaaagtgagtcctctcctcccttcctctcctaaaccatcaatccaaacacac 21090312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 470
Target Start/End: Original strand, 23028088 - 23028168
Alignment:
Q  390 attttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    |||| ||| |||||||||||||||||  ||| || |||||| |||||  ||||||||| |||| |||||||||||||||||    
T  23028088 atttcatagtgtccgtaatttaaaaataaaaagtaagtcctgccctcttttcccctcccaaaccctccatccaaacacacc 23028168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 24560289 - 24560217
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||||||||||    |  ||||||||||||||||||||||||| ||  |||||||||||||||    
T  24560289 gtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 24560217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 27197802 - 27197734
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaa 387  Q
    ||||||||| |||| | ||| ||||||||||| || || |||||||||||||||| |||||||||||||    
T  27197802 aaaataaattaagtatatttaaagtattatatgatcatctatcatgttgttaattcaattttctaaaaa 27197734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 477
Target Start/End: Complemental strand, 41040085 - 41039945
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctc 436  Q
    |||||||||||||| ||| |||||||||||  ||  |||| ||| || |||  |||| ||| |||| |||||||||||  ||||  | |  ||| | |||    
T  41040085 ttgaagtattatatgattgtttatcatgttaatatgttaactttttataaaatatttcatagtgtctgtaatttaaaattgaaaattaaagcctacgctc 41039986  T
Q  437 ccttcccctcctaaactctccatccaaacacaccctaaatg 477  Q
     |||||||||||||||  |||||||||||||||||||||||    
T  41039985 tcttcccctcctaaaccttccatccaaacacaccctaaatg 41039945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 319 - 474
Target Start/End: Complemental strand, 36569056 - 36568902
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  ||||| |||||||  ||| |||||||||||  ||  |||| ||| | |||| ||||| ||| ||| || |||||||||| ||    
T  36569056 aaaataaattaagtgtgattgaactattatacgattgtttatcatgttaatatgttaactttttgaaaaacatttcatagtgttcgaaatttaaaaatga 36568957  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||    | || |||||||| |||| ||||||||| |||||||||||||||||||||    
T  36568956 aaataaactc-tcccctccattccactcctaaaccctccatccaaacacaccctaa 36568902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 405 - 472
Target Start/End: Complemental strand, 41414145 - 41414078
Alignment:
Q  405 taatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||| ||| ||||| ||||||||||||| ||||||||||| ||| ||| ||||| |||||    
T  41414145 taatttaaaaaataaaagtgagccctcccctccctttccctcctaaaccctcaatctaaacataccct 41414078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 319 - 474
Target Start/End: Complemental strand, 25655125 - 25654969
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatata--attatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaa 416  Q
    ||||||||| ||||||  |||||||||||||||  || ||||||||| ||  ||  |||| | |  ||||| |||||  || ||| |||||| ||||||     
T  25655125 aaaataaattaagtgtgattgaagtattatatatgatcatttatcatattaatatgttaactcttcaaaaaacatttcttagtgttcgtaatataaaaat 25655026  T
Q  417 gaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||| || |  |||||||||||||||||||||||| |||||||| ||| |||||||||    
T  25655025 gaaaagtaaaccctcccctcccttcccctcctaaa-tctccatctaaatacaccctaa 25654969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 355 - 468
Target Start/End: Complemental strand, 10748407 - 10748299
Alignment:
Q  355 atttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactc 454  Q
    ||||||||||||  ||  |||| ||| |||||| |||||||||||| |||||||||||||| | ||  |     |||  ||||||||||||||||||| |    
T  10748407 atttatcatgttaatatgttaactttttaaaaaacattttataatgcccgtaatttaaaaatgtaaact-----ctcttctcccttcccctcctaaaccc 10748313  T
Q  455 tccatccaaacaca 468  Q
    ||||||||||||||    
T  10748312 tccatccaaacaca 10748299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 472
Target Start/End: Original strand, 14898135 - 14898224
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||| |||||| |||||||||||||||||||| ||||| | | | ||| |||| ||||| ||| ||||| ||| || ||||||||||||    
T  14898135 aaaaaacattttgtaatgtccgtaatttaaaaatgaaagctaaattctctcctctcttcctctcttaaaccctcaattcaaacacaccct 14898224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 420
Target Start/End: Complemental strand, 40464024 - 40463923
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||||   ||||| | |||||| ||| ||||||||||| ||  |||||| || |||||| || |||||| ||||||||||||||||| ||    
T  40464024 aaaataaattaagtgagattgaatttttatatgattgtttatcatgttattgttttaatattttaaaaaacaatttatagtgtccgtaatttaaaaatga 40463925  T
Q  419 aa 420  Q
    ||    
T  40463924 aa 40463923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 472
Target Start/End: Original strand, 25655144 - 25655216
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||||| ||||| | |  |||||||||||||| |||| | ||| ||| |||||||||||||||    
T  25655144 gtccgtaatttaaaaatgaaagttaaaccctcccctcccttctcctcttcaaccctcaatccaaacacaccct 25655216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 475
Target Start/End: Original strand, 5961945 - 5962015
Alignment:
Q  404 gtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    ||||||| ||||| ||| ||||||| || ||||||||||| |||||||| ||| || |||||||||||||||    
T  5961945 gtaattttaaaaacaaaagtgagtcttcacctcccttccc-tcctaaaccctcaatacaaacacaccctaaa 5962015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 467
Target Start/End: Complemental strand, 14898044 - 14897981
Alignment:
Q  404 gtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacac 467  Q
    ||||||||||||||||| || |    ||| ||||||||||||||||||||||| ||||||||||    
T  14898044 gtaatttaaaaaagaaaagtaaaatttcctctcccttcccctcctaaactctcaatccaaacac 14897981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 407 - 474
Target Start/End: Original strand, 25499074 - 25499141
Alignment:
Q  407 atttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||||||||||| || |  ||| ||||| || |||||| |||||||||||||||||||| ||||||    
T  25499074 atttaaaaaagaaaagtaaacccttccctctctccccctcttaaactctccatccaaacaccccctaa 25499141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 466
Target Start/End: Complemental strand, 27542084 - 27541937
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| || |||  |||||||||||||| ||  |||||||||||  ||  |||  ||| ||| ||  |||| ||| ||||  ||||||||||| ||    
T  27542084 aaaataaattaactgtgattgaagtattatatgatcgtttatcatgttaatatgttagatttttaacaagtatttcatagtgtctctaatttaaaaatga 27541985  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaaca 466  Q
    || ||||  | || |||||||||||||||||||| ||| |||||||||    
T  27541984 aatgtgaaccatctcctcccttcccctcctaaaccctcaatccaaaca 27541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 472
Target Start/End: Original strand, 30200263 - 30200339
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctcc----atccaaacacaccct 472  Q
    ||||||||||||||||||||| || |  ||| |||||||||||||||||| || ||||    |||||||||||||||    
T  30200263 gtccgtaatttaaaaaagaaaagtaaacccttccctcccttcccctcctataccctccctcaatccaaacacaccct 30200339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 416
Target Start/End: Complemental strand, 45663279 - 45663202
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaa 416  Q
    |||||||||||||  || |||||||||||||||| || ||||||| |||||| |||||||| ||| ||| ||||||||||    
T  45663279 ttgaagtattataagatcatttatcatgttgttatttcaattttcaaaaaat-attttatagtgttcgt-atttaaaaaa 45663202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 391 - 437
Target Start/End: Original strand, 1816051 - 1816097
Alignment:
Q  391 ttttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcc 437  Q
    ||||||||||||| |||||||||| ||||| || |||||||||||||    
T  1816051 ttttataatgtccttaatttaaaatagaaaagtaagtcctcccctcc 1816097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 440 - 474
Target Start/End: Complemental strand, 30200130 - 30200096
Alignment:
Q  440 tcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||||||| |||||||||||||||||||||    
T  30200130 tcccctcctaaaccctccatccaaacacaccctaa 30200096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 420
Target Start/End: Complemental strand, 220550 - 220449
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||| |  ||||||| |||||  ||| ||||| |||||  ||  |||| ||| |||||| ||||| ||||||||||||||||||||| ||    
T  220550 aaaataaatcaagtatgattgaagtgttataagattgtttattatgttaatatgttaactttttaaaaaacatttcataatgtccgtaatttaaaaatga 220451  T
Q  419 aa 420  Q
    ||    
T  220450 aa 220449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 403 - 468
Target Start/End: Original strand, 17474381 - 17474446
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacaca 468  Q
    |||||||||||||| ||| || |   |||||||||||||||||||| ||| ||| |||||||||||    
T  17474381 cgtaatttaaaaaataaaagttaactctcccctcccttcccctcctcaaccctcaatccaaacaca 17474446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 472
Target Start/End: Complemental strand, 24253762 - 24253721
Alignment:
Q  431 cccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||| ||||||||||| ||| |||||||||||||||    
T  24253762 cccctccctttccctcctaaaccctcaatccaaacacaccct 24253721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 428 - 469
Target Start/End: Complemental strand, 28581230 - 28581189
Alignment:
Q  428 cctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    ||||||||||||||| || |||||| ||||||||||||||||    
T  28581230 cctcccctcccttcctcttctaaaccctccatccaaacacac 28581189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 477
Target Start/End: Complemental strand, 37102191 - 37102154
Alignment:
Q  440 tcccctcctaaactctccatccaaacacaccctaaatg 477  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  37102191 tcccctcctaaaccctccatccaaacacacccttaatg 37102154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 474
Target Start/End: Original strand, 37102348 - 37102385
Alignment:
Q  437 ccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  37102348 ccttcccctcctaaaccctcaatccaaacacaccctaa 37102385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 42699761 - 42699821
Alignment:
Q  376 attttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcc 437  Q
    ||||| ||||||| |||||||| ||| |||||||||||||  ||| ||||||||||||||||    
T  42699761 attttttaaaaat-attttatattgttcgtaatttaaaaacaaaaagtgagtcctcccctcc 42699821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 474
Target Start/End: Original strand, 42772231 - 42772268
Alignment:
Q  437 ccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  42772231 ccttcccctcctaaaccctccattcaaacacaccctaa 42772268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 4e-50; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 275 - 472
Target Start/End: Complemental strand, 1085687 - 1085489
Alignment:
Q  275 tcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaattt 374  Q
    ||||||||| |||||| ||||| ||| | ||||||||       ||||||||| |||||||||||||||||||||| || |||||||||| ||||| ||     
T  1085687 tcacttttattttttaaattacgaaccatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgctgttagttc 1085588  T
Q  375 aattttctaaaaatcattttataatgtccgtaatttaaaaaa-gaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| || ||||||||||||| | |||||||||||| |||||||||||||||||||    
T  1085587 aattttctaaaaatcattttctaatgtccgtaatttaaaaaaggaaaagtaagtcctcccctccatccccctcctaaaccctccatccaaacacaccct 1085489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 35512909 - 35513037
Alignment:
Q  340 aagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctccct 439  Q
    ||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||| || || ||||||||||||    
T  35512909 aagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccataatttaaaaaataaaagtaagccctcccctccct 35513008  T
Q  440 tcccctcctaaactctccatccaaacaca 468  Q
    ||||||||||||| |||||||||||||||    
T  35513009 tcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 319 - 474
Target Start/End: Complemental strand, 40709445 - 40709290
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    |||| |||| |||||||||||||||||||||| || ||||||||| | |||||||||||||||||||||| |||||||||| | ||||||||||||||||    
T  40709445 aaaagaaattaagtgtttttgaagtattatatgatcatttatcatatcgttaatttaattttctaaaaattattttataatattcgtaatttaaaaaaga 40709346  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    || || |||||||| ||||||||||||| |||||  |  |||||||||||||||||    
T  40709345 aaagtaagtcctcctctcccttcccctcttaaaccttaaatccaaacacaccctaa 40709290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 319 - 464
Target Start/End: Original strand, 25268355 - 25268500
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||||||||||||||||||||| || |||||||| |||||| ||| ||||||||||||||||||||||||| |||||||||||||||||     
T  25268355 aaaataaattaagtgtttttgaagtattatatgatcatttatcacgttgttgattaaattttctaaaaatcattttataatttccgtaatttaaaaaagg 25268454  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaa 464  Q
    || || |  ||||||||| |||||||| |||||| |||||||||||    
T  25268455 aaagtaaaccctcccctcacttccccttctaaaccctccatccaaa 25268500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 319 - 472
Target Start/End: Complemental strand, 51303537 - 51303384
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||||||| ||||||  ||||||||||||| | |||  ||||| ||||||| |    
T  51303537 aaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttaaaaaaatcattttacattgttggtaatataaaaaata 51303438  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || ||||| ||||||||||| ||||||||||||| ||| |||||||||||||||    
T  51303437 aaagtgagccctcccctcccctcccctcctaaaccctcaatccaaacacaccct 51303384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 319 - 470
Target Start/End: Original strand, 2506630 - 2506781
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||||||||||||||||||||| || |||||| || |||||||||  ||||| ||||||| |||||||||| || |||||||||||||||    
T  2506630 aaaataaattaagtgtttttgaagtattatatgatcatttattatattgttaattcgattttttaaaaattattttataatatctgtaatttaaaaaaga 2506729  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    ||  | |||| || |||||||||| || ||||||||||||||||||||||||    
T  2506730 aaactaagtcatctcctcccttcctcttctaaactctccatccaaacacacc 2506781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 320 - 472
Target Start/End: Original strand, 20607311 - 20607461
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||||||| |||||||||||||||||||||| || || |||||||||   |||||||||||| ||||||||||||||||||||| ||||| |||||| ||    
T  20607311 aaataaattaagtgtttttgaagtattatatgataatatatcatgtt---aatttaattttcaaaaaatcattttataatgtccataattaaaaaaaaaa 20607407  T
Q  420 a-ggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |  || |  ||||||||||||||||||||||||| |||||||||||||||||||    
T  20607408 atagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 20607461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 319 - 433
Target Start/End: Original strand, 47071142 - 47071256
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||| | ||||||||||||| |||| ||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47071142 aaaataagttaagtgtttttgaaatattttatgatcatttatcatgttgttaattaaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 47071241  T
Q  419 aaggtgagtcctccc 433  Q
    || || |||| ||||    
T  47071242 aaagttagtcttccc 47071256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 273 - 437
Target Start/End: Complemental strand, 525299 - 525137
Alignment:
Q  273 gttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnn-aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaa 371  Q
    |||||||||||||||||| ||||||||||||||||||||        ||||||||| |||| | |||||||||||||||||| ||||||||| |||||||    
T  525299 gttcacttttaatttttaaattacaaacaacgtaaaatgttttttttaaaataaattaagtttgtttgaagtattatataatcatttatcatattgttaa 525200  T
Q  372 tttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcc 437  Q
    || || ||||||||||| ||||||| ||||||||||||||||||||||| || | |||||||||||    
T  525199 ttcaa-tttctaaaaattattttat-atgtccgtaatttaaaaaagaaaagt-aatcctcccctcc 525137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 319 - 475
Target Start/End: Original strand, 35927904 - 35928059
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||| ||||||||||||||||| || ||||||||||||||||||| |||||||| ||||| |||||||||  || |||||||||||||||    
T  35927904 aaaataaattaagtatttttgaagtattatatgatcatttatcatgttgttaattcaattttct-aaaattattttataaaatctgtaatttaaaaaaga 35928002  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    || || | || ||||  |||||||||| |||| | ||| ||||||||||||||||||    
T  35928003 aaagtaaatcatccctccccttccccttctaagccctcaatccaaacacaccctaaa 35928059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 275 - 420
Target Start/End: Original strand, 1344596 - 1344740
Alignment:
Q  275 tcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaattt 374  Q
    ||||||||| |||||| ||||||||||| | ||||||       |||| |||| |||||||||||| ||| |||||  |||||||||||||||||  ||     
T  1344596 tcacttttattttttaaattacaaacaatgcaaaatgttttttaaaaa-aaattaagtgtttttgatgtaatatatgtttatttatcatgttgttggttc 1344694  T
Q  375 aattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  1344695 aattttctaaaaatcattttacaatgtccgtaatttaaaaaagaaa 1344740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 275 - 420
Target Start/End: Original strand, 33643315 - 33643460
Alignment:
Q  275 tcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaattt 374  Q
    ||||||||| |||||| ||||| || || ||||||||       ||||||||| |||||||||||||||||||||| || ||| ||||| || ||||||     
T  33643315 tcacttttattttttaaattacgaaaaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcattcatcatattattaattc 33643414  T
Q  375 aattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
    ||||||||||||||||||||| ||||| | ||||||||||||||||    
T  33643415 aattttctaaaaatcattttaaaatgttcataatttaaaaaagaaa 33643460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 337 - 476
Target Start/End: Original strand, 41498513 - 41498653
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctc 436  Q
    |||||||||||||| ||  |||||||||||  ||  |||| ||| || ||| ||||| ||| ||||||||||||||||| |||| || | ||||||||||    
T  41498513 ttgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaatcctcccctc 41498612  T
Q  437 cctt-cccctcctaaactctccatccaaacacaccctaaat 476  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  41498613 ccttacccctcctaaactctccatccaaacacaccctaaat 41498653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 319 - 475
Target Start/End: Complemental strand, 38510047 - 38509891
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||  |||||| ||||   |  |||||||| |||||  ||||| ||| ||||||||||||||||| ||    
T  38510047 aaaataaatcaagtgtgattgaagtattatattatcgtttatcgtgttaagatgttaattttttaaaagacatttcatagtgtccgtaatttaaaaatga 38509948  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    || ||||  ||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  38509947 aaagtgaaccctcctctcccttcccctcctaaaccctctatccaaacacaccctaaa 38509891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 319 - 474
Target Start/End: Complemental strand, 40095086 - 40094931
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||  |||||||||||  |   |||| ||| || ||| ||||| ||| ||||||||||||||||| ||    
T  40095086 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatttgttaactttttataaaacatttcatagtgtccgtaatttaaaaatga 40094987  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    || || |  |||||||| |||||||||||||||| |||||||||||||||||||||    
T  40094986 aaagtaaaccctccccttccttcccctcctaaaccctccatccaaacacaccctaa 40094931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 320 - 417
Target Start/End: Complemental strand, 40287407 - 40287311
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaag 417  Q
    |||||||| ||||||||||||||||||||||||| |||||| || ||||||||| |||||||||||| |||||| | ||||||| |||||||||||||    
T  40287407 aaataaattaagtgtttttgaagtattatataatcatttatgattttgttaattcaattttctaaaactcatttcacaatgtcc-taatttaaaaaag 40287311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 320 - 420
Target Start/End: Complemental strand, 13387071 - 13386971
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||||||| ||||||||||   ||||||||| || ||||||||||||||||||| ||||||||||||||| |||||| |||||| ||||| |||||||||    
T  13387071 aaataaattaagtgttttttgtgtattatatgatcatttatcatgttgttaattcaattttctaaaaatcgttttatgatgtccataattaaaaaaagaa 13386972  T
Q  420 a 420  Q
    |    
T  13386971 a 13386971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 400 - 474
Target Start/End: Complemental strand, 30010404 - 30010330
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||||||||||| |||||| || | |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  30010404 gtccgtaatttaaacaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 30010330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 403 - 476
Target Start/End: Original strand, 1085665 - 1085738
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaat 476  Q
    |||||||||||||| ||| ||||||| || |||||||||||||||||||| ||| |||||||||||||||||||    
T  1085665 cgtaatttaaaaaataaaagtgagtcatctcctcccttcccctcctaaaccctctatccaaacacaccctaaat 1085738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 319 - 472
Target Start/End: Original strand, 30010423 - 30010576
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||  ||||| |||||  ||  |||| | | |||||| |||||  || |||||||||||| |||| ||    
T  30010423 aaaataaattaagtgtggttgaagtattatatgatcgtttataatgttaatatgttaactatttaaaaaacatttcgtagtgtccgtaatttcaaaatga 30010522  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || || |  |||||||||||||||||| |||||| |||||||||||||||||||    
T  30010523 aaagtaaaccctcccctcccttccccttctaaaccctccatccaaacacaccct 30010576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 275 - 420
Target Start/End: Original strand, 52707692 - 52707837
Alignment:
Q  275 tcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaattt 374  Q
    ||||||||| |||||| | ||||||||| ||||||||       ||||||||| | || ||||||||||||||||| || |||||||||||||||| |      
T  52707692 tcacttttattttttaaactacaaacaatgtaaaatgttttttaaaaataaattatgtatttttgaagtattatatcatcatttatcatgttgttattaa 52707791  T
Q  375 aattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
    | ||||  |||||| |||| |||||||  |||||||||||||||||    
T  52707792 atttttaaaaaaattatttgataatgttggtaatttaaaaaagaaa 52707837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 319 - 473
Target Start/End: Complemental strand, 2859085 - 2858931
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||| ||||| ||||   ||  |||| ||| |||| | ||||| |||  ||| |||||||| ||| ||    
T  2859085 aaaataaattaagtgtgattgaagtattatatgattgtttataatgtaagtatgttaactttttaaataacatttcatagggtctgtaatttagaaatga 2858986  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacccta 473  Q
    || || |  ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  2858985 aaagtaaaccctcccctccctttccctcctaaaccctccatccaaacacacccta 2858931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 382 - 475
Target Start/End: Original strand, 12234164 - 12234257
Alignment:
Q  382 taaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||||| |||||  || ||||||||||||||||| ||||  | |  ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  12234164 taaaaaacatttcgtagtgtccgtaatttaaaaatgaaaactaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccataaa 12234257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 337 - 469
Target Start/End: Original strand, 7444604 - 7444736
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctc 436  Q
    |||||||||||||| ||  ||||| |||||  ||  |||| ||| |||||||||||||||| |||||||||||| |||| ||||  | |  |||||||||    
T  7444604 ttgaagtattatatgatcgtttattatgttaatatgttaactttttaaaaatcattttatagtgtccgtaattttaaaatgaaaactaaaccctcccctc 7444703  T
Q  437 ccttcccctcctaaactctccatccaaacacac 469  Q
     |||||| | ||||||||| |||||||||||||    
T  7444704 tcttccctttctaaactcttcatccaaacacac 7444736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 320 - 468
Target Start/End: Original strand, 8529891 - 8530039
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||||||| ||||||  |||||||||||||| ||  |||| ||||||  ||  |||| ||| ||||||  |||| ||| ||||||||||||||||| |||    
T  8529891 aaataaattaagtgtgattgaagtattatatgatcgtttaccatgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaa 8529990  T
Q  420 aggtgagtcctcccctcccttcccctcctaaactctccatccaaacaca 468  Q
    | || |    || ||||||||||||||||||||||| ||||||||||||    
T  8529991 aagtaaactttcacctcccttcccctcctaaactcttcatccaaacaca 8530039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 12234082 - 12234010
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||||||||||  | || ||| ||||||||||||||||||||| ||| |||||||||||||||    
T  12234082 gtccgtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacaccct 12234010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 32951490 - 32951565
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||||||||||||||| |||| || |   |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  32951490 gtccgtaatttaaaaacgaaaagtaaactctcccctcccttcctctcctaaactctcaatccaaacacaccctaaa 32951565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 35349634 - 35349710
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaat 476  Q
    |||||||||||||||| |||| || |  ||||||||||||||||||| ||||| ||  |||||||||||||||||||    
T  35349634 gtccgtaatttaaaaacgaaaagtaaaccctcccctcccttcccctcataaacccttaatccaaacacaccctaaat 35349710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 403 - 474
Target Start/End: Complemental strand, 33643337 - 33643266
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||||||||||| ||| ||||||| |||| ||||||||||||||||||  || ||| |||||||||||||    
T  33643337 cgtaatttaaaaaataaaagtgagtcatcccttcccttcccctcctaaaccttcaatctaaacacaccctaa 33643266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 405 - 472
Target Start/End: Complemental strand, 35927881 - 35927814
Alignment:
Q  405 taatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||| ||| ||||| |||||||||| |||||||||||||  ||| |||||||||||||||    
T  35927881 taatttaaaaaataaatgtgagccctcccctccattcccctcctaaaacctcaatccaaacacaccct 35927814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 428 - 472
Target Start/End: Complemental strand, 26324058 - 26324014
Alignment:
Q  428 cctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||    
T  26324058 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 26324014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 50079537 - 50079473
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttcta 383  Q
    ||||||||| |||||||||| ||||||||||| || ||||||||| |||||| || |||||||||    
T  50079537 aaaataaattaagtgtttttaaagtattatatgatcatttatcatattgttagttaaattttcta 50079473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 399 - 474
Target Start/End: Complemental strand, 20576206 - 20576131
Alignment:
Q  399 tgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||||||||||| ||||  | |   |||||||||||||||||||||||| ||| |||||||||||| ||||    
T  20576206 tgtccgtaatttaaaaatgaaatctaaactctcccctcccttcccctcctaaaccctctatccaaacacactctaa 20576131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 319 - 472
Target Start/End: Complemental strand, 35349615 - 35349466
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||  ||| ||| |||||||||||||| ||| |||||||||||  ||  |||| ||| || ||| ||||| |   ||||||||||||||||| ||    
T  35349615 aaaataaactaagggttattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaacatttcag--tgtccgtaatttaaaaatga 35349518  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || || |  ||||||| ||  ||||||| ||||| |||||||||||||||||||    
T  35349517 aaagtaaaccctccccccc--tcccctcttaaaccctccatccaaacacaccct 35349466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 405 - 472
Target Start/End: Complemental strand, 41498471 - 41498404
Alignment:
Q  405 taatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||||||| |||| || |  ||||||||| ||||||||||||||| ||| |||||||||||||||    
T  41498471 taatttaaaaacgaaaagtaaaccctcccctcacttcccctcctaaaccctcaatccaaacacaccct 41498404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 340 - 472
Target Start/End: Original strand, 47261381 - 47261515
Alignment:
Q  340 aagtattatata--attatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcc 437  Q
    ||||||||||||  ||||||||||||||| ||| || |||||   ||||   |||||||| |||||||| |||||||||||||  | |  ||| |||||     
T  47261381 aagtattatatatgattatttatcatgtttttatttcaatttaaaaaaatgtattttatagtgtccgtactttaaaaaagaaaattaaaccctaccctct 47261480  T
Q  438 cttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||| |||||  | |||||||||||||||||    
T  47261481 cttccccttctaaatcccccatccaaacacaccct 47261515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 476
Target Start/End: Complemental strand, 2470764 - 2470726
Alignment:
Q  438 cttcccctcctaaactctccatccaaacacaccctaaat 476  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  2470764 cttcccctcctaaaccctccatccaaacacaccctaaat 2470726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 2859104 - 2859169
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaac 465  Q
    ||||||||||||||||| ||| || |  |||||||||||||||||||||||||  || ||||||||    
T  2859104 gtccgtaatttaaaaaataaaagtaaaccctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 38510066 - 38510135
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    ||||||| |||||||||||||  | |  ||||||||||||||||||||||||| ||  ||||||||||||    
T  38510066 gtccgtagtttaaaaaagaaaactaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 38510135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 380
Target Start/End: Complemental strand, 44211058 - 44210997
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaatttt 380  Q
    ||||||||| ||||||  |||||||||||||| ||  ||||||||||||||| |||||||||    
T  44211058 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttgttattttaatttt 44210997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 17622630 - 17622694
Alignment:
Q  321 aataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaa 385  Q
    ||||||| ||||||||| |||||||||||| || | |||||||||| |||||| |||||| ||||    
T  17622630 aataaattaagtgttttagaagtattatatgatcacttatcatgttattaattcaattttttaaa 17622694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 319 - 415
Target Start/End: Complemental strand, 49946741 - 49946645
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaa 415  Q
    ||||||||| || |||  |||||||||||||| || ||||||||||||  ||  |||| |||  |||||  |||||||| |||||||||||||||||    
T  49946741 aaaataaattaaatgtgattgaagtattatatgataatttatcatgttaatatgttaacttttaaaaaaatattttatagtgtccgtaatttaaaaa 49946645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 402
Target Start/End: Original strand, 42230629 - 42230712
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtc 402  Q
    ||||||||| ||||||  |||||||||||||| ||| ||||| |||||  || ||||| ||| |||||| ||||||||| ||||    
T  42230629 aaaataaattaagtgtgattgaagtattatatgattgtttattatgttaatattttaactttataaaaaacattttatagtgtc 42230712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 400 - 474
Target Start/End: Complemental strand, 7444550 - 7444476
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||||||||||||||| || |  |||||| ||||||| ||||| |||| ||| |||| ||||||| ||||    
T  7444550 gtccgtaatttaaaaaagaaaagtaaaccctcccttcccttctcctcccaaaccctcaatcctaacacactctaa 7444476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 403 - 477
Target Start/End: Complemental strand, 17622605 - 17622531
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaatg 477  Q
    |||| ||||||||| ||| |||||||||||| |  ||||||||||| ||| ||  ||||||||||||||| ||||    
T  17622605 cgtagtttaaaaaataaaagtgagtcctcccattgcttcccctcctgaacccttaatccaaacacaccctcaatg 17622531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 432 - 474
Target Start/End: Complemental strand, 20607263 - 20607221
Alignment:
Q  432 ccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||||||||||||||| ||| || ||||||||||||||    
T  20607263 ccctcccttcccctcctaaaccctcaattcaaacacaccctaa 20607221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 474
Target Start/End: Original strand, 26941042 - 26941079
Alignment:
Q  437 ccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  26941042 ccttcccctcctaaaccctcaatccaaacacaccctaa 26941079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 42742463 - 42742406
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaa 376  Q
    ||||||||| ||||||  |||||||| ||||| | |||||||||||||||| ||||||    
T  42742463 aaaataaattaagtgtgattgaagtactatatgactatttatcatgttgttcatttaa 42742406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 51597759 - 51597892
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||| |||||||| ||  ||  |||| ||| |||||| ||||| ||| ||| | ||||||||||  ||    
T  51597759 aaaataaattaagtgtgattgaagtattatatgattgtttatcatcttaatatgttaactttttaaaaaccatttcatagtgttcataatttaaaattga 51597858  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaac 452  Q
    || || | || ||| || |||||| |||||||||    
T  51597859 aaagtaaatcatcctcttccttcctctcctaaac 51597892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 1e-46; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 275 - 475
Target Start/End: Original strand, 45257354 - 45257554
Alignment:
Q  275 tcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaattt 374  Q
    ||||||||| ||| || ||||| ||||| ||||||||       ||||||||| |||||||||||||||||||||| || ||||||||| |||||||||     
T  45257354 tcacttttattttataaattacgaacaatgtaaaatgttttcttaaaataaattaagtgtttttgaagtattatatgatcatttatcatattgttaattc 45257453  T
Q  375 aattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| || |  | || ||||||||||| |||||||  |||||||||||||||||||||    
T  45257454 aattttcaaaaaatcattttataatatccgtaatttaaaaaagaaaagtaaaccatctcctcccttcccatcctaaaacctccatccaaacacaccctaa 45257553  T
Q  475 a 475  Q
    |    
T  45257554 a 45257554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 270 - 466
Target Start/End: Original strand, 31061401 - 31061598
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||| ||||||||| |||||| ||||| ||||| ||||||||       ||||||||| ||||||||||||| |||||||| || |||||||||||||||    
T  31061401 agggctcacttttattttttaaattacgaacaatgtaaaatgtgtttttaaaataaattaagtgtttttgaaatattatatgatcatttatcatgttgtt 31061500  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaattt-aaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaaca 466  Q
    |||| ||||||| |||| ||| ||||||||||| ||||||| |||||||||| || | ||||||||||| |||||||||||||| ||| |||||||||    
T  31061501 aattcaattttcaaaaagtcactttataatgtctgtaatttaaaaaaagaaaagtaaatcctcccctccattcccctcctaaaccctcaatccaaaca 31061598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 320 - 472
Target Start/End: Original strand, 42813712 - 42813864
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||||||| || | ||||| ||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  42813712 aaataaatcaaatatttttaaagtattatatgattatttatcaggttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaa 42813811  T
Q  420 aggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |  | || | ||||||| ||||||||||||||| || ||||||||||||||||    
T  42813812 aaataagccatcccctctcttcccctcctaaacccttcatccaaacacaccct 42813864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 319 - 476
Target Start/End: Complemental strand, 15085853 - 15085695
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaa-tttaaaaaag 417  Q
    ||||||||| |||||||||||||||||||||| || |||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||     
T  15085853 aaaataaattaagtgtttttgaagtattatatgatcatttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaattttaaaaaaa 15085754  T
Q  418 aaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaat 476  Q
    ||| || ||  |||| ||||||||  ||| |||||| | ||||||||||||| ||||||    
T  15085753 aaaagtaagctctcctctcccttcttctcttaaacttttcatccaaacacacactaaat 15085695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 272 - 410
Target Start/End: Original strand, 34187619 - 34187759
Alignment:
Q  272 ggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatata--attatttatcatgttgtt 369  Q
    ||||||||||||||||||| ||||| |||||||||| |||       ||||||||| |||||||||||||||||||||||  || |||||||||||||||    
T  34187619 ggttcacttttaatttttaaattacgaacaacgtaagatgttttattaaaataaattaagtgtttttgaagtattatatataatcatttatcatgttgtt 34187718  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaattt 410  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  34187719 aattcaattttctaaaaatcattttataatgtccataattt 34187759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 273 - 474
Target Start/End: Complemental strand, 2381186 - 2380990
Alignment:
Q  273 gttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaat 372  Q
    ||||||||||| |||||| ||||| ||||| ||||||||       ||||||||| |||||||||||||||||||||| || ||  |||||||||| |||    
T  2381186 gttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatcatcatcaatcatgttgtcaat 2381087  T
Q  373 ttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccct-cccttcccctcctaaactctccatccaaacacaccc 471  Q
    | |||||||||||| |||||||||||      || |||||||||||||  ||||||||||||| ||||||||||||||||| ||| ||||||||||| ||    
T  2381086 tcaattttctaaaattcattttataa------tattttaaaaaagaaaaatgagtcctcccctccccttcccctcctaaaccctctatccaaacacatcc 2380993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 275 - 418
Target Start/End: Complemental strand, 3094550 - 3094407
Alignment:
Q  275 tcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaattt 374  Q
    ||||||||| |||||| ||||||||| | ||||||||       |||||||||   |||||||||||||||||||| ||||||||||||||||||||||     
T  3094550 tcacttttattttttaaattacaaactatgtaaaatgtttttctaaaataaatttcgtgtttttgaagtattatatgattatttatcatgttgttaattc 3094451  T
Q  375 aattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    |||||||||| ||||||||||||| || ||||||||||||||||    
T  3094450 aattttctaagaatcattttataacgttcgtaatttaaaaaaga 3094407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 359 - 475
Target Start/End: Original strand, 22356134 - 22356251
Alignment:
Q  359 atcatgttgttaatttaattttctaaaaatcattttataa-tgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctcc 457  Q
    ||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  |||  ||||||||||||||||||||||||  |||     
T  22356134 atcattttgttaattcaattttctaaaaatcattttataaatgtccgtaatttaaaaaagaaaaatgaaccctcccctcccttcccctcctaaatcctca 22356233  T
Q  458 atccaaacacaccctaaa 475  Q
    ||||||||||||||||||    
T  22356234 atccaaacacaccctaaa 22356251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 270 - 452
Target Start/End: Complemental strand, 42296505 - 42296323
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||||||||||||| |||||| ||||| ||| | |||||||        ||||| ||| |||||||||| || |||||||| || |||||| ||||||||    
T  42296505 agggttcacttttattttttaaattacgaacgatgtaaaatatttttttaaaatgaattaagtgtttttaaattattatatgatcatttattatgttgtt 42296406  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaac 452  Q
    |||| | |||||||||| |||||||||||| |||||||||||||||||||| || |||||| | ||||||||||||| |||||    
T  42296405 aattcatttttctaaaattcattttataatatccgtaatttaaaaaagaaaagtaagtccttcactcccttcccctcataaac 42296323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 319 - 469
Target Start/End: Complemental strand, 31795922 - 31795772
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||  ||||||||||||||| |||| ||||  ||||| | ||| ||| ||||||||||||||||| ||    
T  31795922 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaatttaaaaacga 31795823  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    || || ||||||||||||||||| |||| ||||| ||||||||||||||||    
T  31795822 aaagtaagtcctcccctcccttcacctcataaaccctccatccaaacacac 31795772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 277 - 414
Target Start/End: Original strand, 45098218 - 45098355
Alignment:
Q  277 acttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaa 376  Q
    ||||||| |||||| |||||||| || ||||||||       ||||||||| |||||||||||||||||||||| || ||||||||||||||||||| ||    
T  45098218 acttttattttttacattacaaataatgtaaaatgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaa 45098317  T
Q  377 ttttctaaaaatcattttataatgtccgtaatttaaaa 414  Q
    ||||  ||||| |||||||||||||| |||||||||||    
T  45098318 tttttcaaaaaccattttataatgtctgtaatttaaaa 45098355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 319 - 472
Target Start/End: Original strand, 23748186 - 23748339
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||  |||||||||||  ||  |||| ||| |||||  ||||| ||| |||||||| |||||||| ||    
T  23748186 aaaataaatcaagtgtgattgaagtattatattatcgtttatcatgttaatatgttaactttttaaaagacatttcatagtgtccgtagtttaaaaatga 23748285  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || ||||  ||||||||||||||||||||||||| |||||||||||||||||||    
T  23748286 aaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 23748339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 319 - 435
Target Start/End: Original strand, 33265697 - 33265813
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||||||||||||||||||||| || ||||||||| ||||||||| ||||||| ||||||||||||| | ||| | |||||||||||| |    
T  33265697 aaaataaattaagtgtttttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttacattgttcataatttaaaaaata 33265796  T
Q  419 aaggtgagtcctcccct 435  Q
    || | ||||||||||||    
T  33265797 aaagcgagtcctcccct 33265813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 319 - 437
Target Start/End: Complemental strand, 36052241 - 36052122
Alignment:
Q  319 aaaataaa-taaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaag 417  Q
    |||||||| ||||||||||||||||||| |||| || || ||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||| ||    
T  36052241 aaaataaagtaaagtgtttttgaagtatcatatgatcatgtatgatgttgttaattcaattttctaaaaatcattttataatgtatgtaatttaaaatag 36052142  T
Q  418 aaaggtgagtcctcccctcc 437  Q
    ||| || |||| ||||||||    
T  36052141 aaaagtaagtcgtcccctcc 36052122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 320 - 452
Target Start/End: Complemental strand, 1052907 - 1052774
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaa-aaaaga 418  Q
    |||||||| || |||||||||| |||||||  || ||||||||||||||||||| |||||||||||||| |||||||||| ||  |||||||| ||||||    
T  1052907 aaataaattaaatgtttttgaaatattatacgatcatttatcatgttgttaattcaattttctaaaaattattttataatatcgataatttaaaaaaaga 1052808  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaac 452  Q
    || || | || |||||||| ||| ||||||||||    
T  1052807 aaagtaaatcttcccctccattctcctcctaaac 1052774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 319 - 420
Target Start/End: Original strand, 21502124 - 21502225
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||||||||||||||||||||| |  ||||||| ||||||||||  |||||||| ||||| |||||||||| |||||| |||||||||||    
T  21502124 aaaataaattaagtgtttttgaagtattatatgaccatttatcttgttgttaatgcaattttcttaaaattattttataatatccgtagtttaaaaaaga 21502223  T
Q  419 aa 420  Q
    ||    
T  21502224 aa 21502225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 319 - 420
Target Start/End: Original strand, 35325360 - 35325461
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||| ||||||||||||||||| || |||||||||||| |||||| |||||| ||||||| |||||||||||||  ||||||||||| ||    
T  35325360 aaaataaattaagtatttttgaagtattatatgatcatttatcatgttattaattcaattttttaaaaattattttataatgtcgttaatttaaaaagga 35325459  T
Q  419 aa 420  Q
    ||    
T  35325460 aa 35325461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 324 - 476
Target Start/End: Original strand, 9313079 - 9313236
Alignment:
Q  324 aaataaagtgtttttgaagtattatataatt----atttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||| ||||||||||||||||| |||| ||     |||||||| |||||||||| ||||||| |||||||||||||||||||| |||||||||||| |||    
T  9313079 aaattaagtgtttttgaagtataatatgatcgatcatttatcaagttgttaattcaattttcgaaaaatcattttataatgtctgtaatttaaaaaggaa 9313178  T
Q  420 aggtgag-tcctcccctcccttcccctcctaaactctccatccaaacacaccctaaat 476  Q
    | || ||  |||| |||| | ||||||||||||| ||||||| ||  |||||||||||    
T  9313179 aagtaagcccctctcctctcatcccctcctaaaccctccatcgaagaacaccctaaat 9313236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 339 - 472
Target Start/End: Original strand, 35736302 - 35736431
Alignment:
Q  339 gaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctccc 438  Q
    |||||||||||| ||  |||||||||||    |||| ||||| |||||| | ||| ||| |||||| |||||||||| |||| ||||| |||||||||||    
T  35736302 gaagtattatatgatcgtttatcatgtt----attttattttttaaaaaacttttcatagtgtccgaaatttaaaaacgaaaagtgagccctcccctccc 35736397  T
Q  439 ttcccctcctaaactctccatccaaacacaccct 472  Q
    ||| |||||||||| |||||||||||||||||||    
T  35736398 ttcacctcctaaaccctccatccaaacacaccct 35736431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 421
Target Start/End: Complemental strand, 8554441 - 8554350
Alignment:
Q  330 agtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaag 421  Q
    ||||||||||||||||| ||  || |||||||||| |||||||| ||||||  |||||| ||||||||||||||||||||| ||||||||||    
T  8554441 agtgtttttgaagtattgtacgatcatttatcatgatgttaattcaatttttaaaaaattattttataatgtccgtaatttgaaaaagaaag 8554350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 355 - 474
Target Start/End: Original strand, 16713652 - 16713771
Alignment:
Q  355 atttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactc 454  Q
    |||| ||||||| |||||| |||||||||||||| |||||||||| |||||| ||| |||||||||    ||  ||| ||||||||||  |||||||| |    
T  16713652 atttctcatgttattaattcaattttctaaaaattattttataatatccgtagttttaaaaagaaaaacaagctctctcctcccttcctttcctaaaccc 16713751  T
Q  455 tccatccaaacacaccctaa 474  Q
    ||||||||||||||||||||    
T  16713752 tccatccaaacacaccctaa 16713771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 320 - 395
Target Start/End: Complemental strand, 31928196 - 31928121
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcatttta 395  Q
    |||||||| |||||||||||||||||||||| || |||||||||||| |||||| ||||||  |||||||||||||    
T  31928196 aaataaattaagtgtttttgaagtattatatgatcatttatcatgttattaattcaattttaaaaaaatcatttta 31928121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 389 - 472
Target Start/End: Complemental strand, 45257390 - 45257307
Alignment:
Q  389 cattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||| | ||| ||||||||| |||| ||| |||||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  45257390 cattttacattgttcgtaatttataaaataaaagtgagtcctcccttcctttcccctcctaaactctcaatccaaacacaccct 45257307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 35736247 - 35736170
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaatg 477  Q
    |||||| ||||||||||||||  | |  ||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  35736247 gtccgtgatttaaaaaagaaaattaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaatg 35736170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 319 - 472
Target Start/End: Complemental strand, 36347694 - 36347541
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||||||| |||||||||||  ||  |||| | | ||||||  || | ||| | |||||||| |||||| ||    
T  36347694 aaaataaattaagtgtgattgaagtattatataattgtttatcatgttaatatgttaactatttaaaaaatatgtcatagtatccgtaatataaaaatga 36347595  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || ||||   ||| | |||||||||||||||||| || ||||||||||||||||    
T  36347594 aaagtgaactctctcttcccttcccctcctaaacccttcatccaaacacaccct 36347541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 337 - 474
Target Start/End: Original strand, 887225 - 887355
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctc 436  Q
    |||||||||||||| ||  |||||||||||     ||||||||| |||||| |||||||||   |||||||||||||||||||| || ||  ||||||||    
T  887225 ttgaagtattatatgatcgtttatcatgtt----ttttaatttt-taaaaa-cattttatagcatccgtaatttaaaaaagaaaagtaagcgctcccctc 887318  T
Q  437 ccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||||||||||||| || |||||| |||||||||||    
T  887319 ccttcccctcctaaac-cttcatccagacacaccctaa 887355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 337 - 471
Target Start/End: Complemental strand, 36046339 - 36046205
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctc 436  Q
    |||||||||||| | || ||||| ||||||  ||  |||| ||| |||||| |||||| || ||||||||||||||||| ||||  | |   ||||||||    
T  36046339 ttgaagtattatgtgatcatttaacatgttaatatgttaactttttaaaaaacattttctagtgtccgtaatttaaaaatgaaaaataaactctcccctc 36046240  T
Q  437 ccttcccctcctaaactctccatccaaacacaccc 471  Q
      |||||||||||||| ||||||||||||||||||    
T  36046239 atttcccctcctaaaccctccatccaaacacaccc 36046205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 400 - 474
Target Start/End: Original strand, 36347713 - 36347787
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||||||||||||||| || |   ||||| |||||||||||||||||| ||| |||||||||||||||||    
T  36347713 gtccgtaatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaacacaccctaa 36347787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 320 - 472
Target Start/End: Original strand, 9631652 - 9631804
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||||||| ||||||   ||||||||||||| ||  |||||||||||  ||  |||| ||| ||||   ||||| ||  ||||||||||||||||| |||    
T  9631652 aaataaatcaagtgtgaatgaagtattatattatcgtttatcatgttaatatgttaactttttaaaggacatttcatggtgtccgtaatttaaaaacgaa 9631751  T
Q  420 aggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    | || |  ||||  ||||||| ||||||||||| |||||||||||||||||||    
T  9631752 aagttaaccctcttctccctttccctcctaaaccctccatccaaacacaccct 9631804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 403 - 475
Target Start/End: Original strand, 42296478 - 42296550
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||||||||||||| ||| ||||  |||| |||||||||||||||||| | ||| ||||||||||||||||||    
T  42296478 cgtaatttaaaaaataaaagtgaaccctctcctcccttcccctcctaatccctcaatccaaacacaccctaaa 42296550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 389 - 472
Target Start/End: Complemental strand, 31061442 - 31061359
Alignment:
Q  389 cattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||| | ||| |||||||||||||| ||| ||||| |||||| ||| ||||||||||||||  || |||||||||||||||    
T  31061442 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcctttcccctcctaaaccttcaatccaaacacaccct 31061359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 3094529 - 3094595
Alignment:
Q  404 gtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    ||||||||||||| ||| ||||||| ||||||||||| || |||||||| ||| |||||||||||||    
T  3094529 gtaatttaaaaaataaaagtgagtcttcccctccctttccttcctaaaccctcaatccaaacacacc 3094595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 470
Target Start/End: Complemental strand, 8427024 - 8426881
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||||   |||||||||||||| || ||||||||||||        || ||| |||||| ||||| ||| ||||| |||||||||||  |    
T  8427024 aaaataaattaagtgcgattgaagtattatatgatcatttatcatgtt--------aactttttaaaaaacatttcatagtgtccttaatttaaaaatta 8426933  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    || || |  |||||| ||||||||||||||||||||||||| |||| |||||    
T  8426932 aaagtaaaccctcccttcccttcccctcctaaactctccattcaaatacacc 8426881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 402 - 472
Target Start/End: Original strand, 15224868 - 15224938
Alignment:
Q  402 ccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||||||||||||||| || |  | ||||||||||||||||||||||| ||  |||||||||||||||    
T  15224868 ccgtaatttaaaaaagaaaagtaaaccatcccctcccttcccctcctaaacccttgatccaaacacaccct 15224938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 428 - 474
Target Start/End: Complemental strand, 17379890 - 17379844
Alignment:
Q  428 cctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  17379890 cctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 17379844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 383 - 472
Target Start/End: Original strand, 1270433 - 1270522
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||| ||||||| | ||| |||||||||||||| ||| ||||| |||||||||||||  |||||||||  ||| |||||||| ||||||    
T  1270433 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttgtcctcctaaatcctcaatccaaacgcaccct 1270522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 475
Target Start/End: Original strand, 8554446 - 8554498
Alignment:
Q  423 tgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    ||||||||||||||| |||||||| |||||| || ||||||||||||||||||    
T  8554446 tgagtcctcccctccattcccctcttaaactttcaatccaaacacaccctaaa 8554498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 319 - 470
Target Start/End: Original strand, 40022461 - 40022615
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaa---tttaattttctaaaaatcattttataatgtccgtaatttaaaaa 415  Q
    ||||||||| ||||||  |||||||||||||| ||| |||| ||| || | |    |||| ||||  ||||| ||||| ||| |||| ||||||||||||    
T  40022461 aaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttaaaaaaacatttcatagtgtctgtaatttaaaaa 40022560  T
Q  416 agaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
     |||| || |  |||||||||||||| |||| ||||| |||||||||| ||||||    
T  40022561 tgaaatgtaaaccctcccctcccttctcctcttaaaccctccatccaagcacacc 40022615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 321 - 420
Target Start/End: Complemental strand, 15224845 - 15224746
Alignment:
Q  321 aataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
    ||||||| ||||||  |||||||||||||| || ||||||||||||  ||  |||  ||| |||||| ||||| ||| ||||||||||||||||| ||||    
T  15224845 aataaattaagtgtgattgaagtattatatgatcatttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaa 15224746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 411 - 474
Target Start/End: Original strand, 17333995 - 17334058
Alignment:
Q  411 aaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||| ||| |||||||||||||| |||||||||||||||| ||| || |||| |||||||||    
T  17333995 aaaaaataaaagtgagtcctccccttccttcccctcctaaaccctcaattcaaaaacaccctaa 17334058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 383 - 465
Target Start/End: Original strand, 31928204 - 31928286
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaac 465  Q
    ||||| ||||||| | |||  ||||||||||||  ||| ||||| |||||| |||||||||||||||||| ||| ||||||||    
T  31928204 aaaaaacattttacattgtttgtaatttaaaaattaaaagtgagccctcccttcccttcccctcctaaaccctcgatccaaac 31928286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 36046374 - 36046443
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    ||||||||||||||||| ||| || |  ||||||||||||||||||| ||||| ||| |||||||||||||    
T  36046374 gtccgtaatttaaaaaacaaaagtaaa-cctcccctcccttcccctcataaaccctcaatccaaacacacc 36046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 337 - 448
Target Start/End: Complemental strand, 36566986 - 36566874
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaa--ttttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccc 434  Q
    |||||||||||||| || ||||||||||||  ||  ||||  |||| |||||| | ||| ||||||||||||||||||||| |||| || | ||||| |     
T  36566986 ttgaagtattatatgatcatttatcatgttaatatgttaactttttataaaaaac-tttcataatgtccgtaatttaaaaatgaaaagtaaatcctctca 36566888  T
Q  435 tcccttcccctcct 448  Q
    ||||||||||||||    
T  36566887 tcccttcccctcct 36566874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 471
Target Start/End: Original strand, 1052911 - 1053000
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttccc-ctcctaaactctccatccaaacacaccc 471  Q
    ||||| ||||||| | ||| |||||||||||||| ||| |||||  |||| |||| ||||| ||||||||||||| ||||||| ||||||    
T  1052911 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgagctctcctctcctttcccgctcctaaactctcaatccaaatacaccc 1053000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 429 - 474
Target Start/End: Complemental strand, 15224188 - 15224143
Alignment:
Q  429 ctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||    
T  15224188 ctcccctcccttcccctcctaaaccctccatccaaaggcaccctaa 15224143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 403 - 464
Target Start/End: Complemental strand, 33265676 - 33265615
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaa 464  Q
    |||||||||||||| |||  |||||| || |||||||||||||||||||| ||| |||||||    
T  33265676 cgtaatttaaaaaataaaaatgagtcatcgcctcccttcccctcctaaaccctcaatccaaa 33265615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 403 - 472
Target Start/End: Complemental strand, 34187644 - 34187575
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||  ||| ||||  | |||||| |||||| ||||||||||||| |||||||||||||||    
T  34187644 cgtaatttaaaaattaaaagtgaaccttccccttccttccactcctaaactctcaatccaaacacaccct 34187575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 472
Target Start/End: Complemental strand, 41778862 - 41778773
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||| ||||||||| ||||| |||||||||  | ||| || |  ||||||||||||| |||| |||||| ||| |||||||||||||||    
T  41778862 aaaaaacattttatactgtccataatttaaagtacaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacaccct 41778773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 434 - 469
Target Start/End: Complemental strand, 6721710 - 6721675
Alignment:
Q  434 ctcccttcccctcctaaactctccatccaaacacac 469  Q
    |||||||| |||||||||||||||||||||||||||    
T  6721710 ctcccttctcctcctaaactctccatccaaacacac 6721675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 14196823 - 14196878
Alignment:
Q  382 taaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcc 437  Q
    |||||| ||||||||| ||| |||||||||||||||||| || || ||||||||||    
T  14196823 taaaaaacattttatagtgttcgtaatttaaaaaagaaaagtaagccctcccctcc 14196878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 887005 - 886938
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaac 452  Q
    ||||| ||||||||| |||  ||||||||||||||||| || || |||||| | ||||||||||||||||    
T  887005 aaaaagcattttatattgt--gtaatttaaaaaagaaaagtaagccctcccttaccttcccctcctaaac 886938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 428 - 470
Target Start/End: Complemental strand, 9427029 - 9426987
Alignment:
Q  428 cctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    |||| ||||||||||||||||||||| || |||||||||||||    
T  9427029 cctctcctcccttcccctcctaaactttcaatccaaacacacc 9426987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 430 - 472
Target Start/End: Original strand, 17380043 - 17380085
Alignment:
Q  430 tcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||    
T  17380043 tcccctcacttcccctcctaaaccctcaatccaaacacaccct 17380085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 319 - 437
Target Start/End: Complemental strand, 39732882 - 39732764
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||| |  |||||||||||||| ||  |||||||||||  ||  |||| ||| || ||| ||||| ||||||| ||||||||||||| ||    
T  39732882 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatga 39732783  T
Q  419 aaggtgagtcctcccctcc 437  Q
    || || |  ||||||||||    
T  39732782 aaagtaaaccctcccctcc 39732764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 372 - 437
Target Start/End: Original strand, 1583221 - 1583286
Alignment:
Q  372 tttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcc 437  Q
    ||||| ||| |||||| ||||| ||| ||||||||||||||||| |||| ||||  ||||||||||    
T  1583221 tttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccctcccctcc 1583286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 17331500 - 17331415
Alignment:
Q  387 atcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||| | || | |||||||||||| || |  |||||||||| |||||||||| ||| |||  | ||||||||||||    
T  17331500 atcattttataatgccagtgaattaaaaaagaaaagtaaaccctcccctcctttcccctccttaaccctctttgcaaacacaccct 17331415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 31928251 - 31928210
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatg 311  Q
    |||| |||||||||||||||| ||||||||||| ||||||||    
T  31928251 agggctcacttttaatttttaaattacaaacaatgtaaaatg 31928210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 5e-46; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 319 - 469
Target Start/End: Original strand, 26318396 - 26318546
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||||||||||||||||||||| || | ||||||||||||||||| |||||||||||| |||||||||||  ||| ||||||||||||||    
T  26318396 aaaataaattaagtgtttttgaagtattatatgatcaattatcatgttgttaattcaattttctaaaagtcattttataaaatccataatttaaaaaaga 26318495  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    || || | || ||||||||||| ||||||||||||||||||||||||||||    
T  26318496 aaagtaaatcttcccctccctttccctcctaaactctccatccaaacacac 26318546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 319 - 472
Target Start/End: Original strand, 3841176 - 3841330
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaa--atcattttataatgtccgtaatttaaaaaa 416  Q
    ||||||||| |||||||||||||||||||||| || ||||||||| ||||||||| |||||| |||||  ||||||||||||||||||||||||||||||    
T  3841176 aaaataaattaagtgtttttgaagtattatatcatcatttatcat-ttgttaattcaattttgtaaaaaaatcattttataatgtccgtaatttaaaaaa 3841274  T
Q  417 gaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||| || |||| |||  |  ||||||||||||||| || ||||||||||||||||    
T  3841275 gaaaagtaagtcttccattttcttcccctcctaaacccttcatccaaacacaccct 3841330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 319 - 469
Target Start/End: Complemental strand, 25468552 - 25468403
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| |||||||| |||||||||| ||||| |||||||||||||| ||||||||||||||    
T  25468552 aaaataaattaagtgtttttgaagtattatataatcatttatcacgttgttaaattaattttcttaaaattattttataatgtccataatttaaaaaaga 25468453  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    || || |  ||| ||||| ||| |||||||||||||||  || ||||||||    
T  25468452 aaagtaaaacct-ccctctctttccctcctaaactctctgtctaaacacac 25468403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 320 - 474
Target Start/End: Complemental strand, 9051686 - 9051532
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||||||| |||||||||| |||||  |||| || ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||    
T  9051686 aaataaattaagtgtttttaaagtagcatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatatccgtaatttaaaaaaaaa 9051587  T
Q  420 aggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    | || |  | || ||||| || ||||||||||  ||| |||||||| ||||||||    
T  9051586 aagtaaaccatctcctccatttccctcctaaatcctcaatccaaacgcaccctaa 9051532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 334 - 464
Target Start/End: Original strand, 10293354 - 10293484
Alignment:
Q  334 tttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctccc 433  Q
    ||||||||||||||||| ||||||||| ||||||| |||| | ||||||||||||||||||||||| || ||||||| ||||||||| || ||  |||||    
T  10293354 tttttgaagtattatatgattatttatgatgttgtcaattcagttttctaaaaatcattttataatatctgtaatttgaaaaagaaaagtaagctctccc 10293453  T
Q  434 ctcccttcccctcctaaactctccatccaaa 464  Q
    |||||||| |||||||||| || ||||||||    
T  10293454 ctcccttctcctcctaaacccttcatccaaa 10293484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 319 - 472
Target Start/End: Complemental strand, 4097388 - 4097235
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||||| |||||||| ||| || ||||||||||||||||||| |||||||||||||  |||||||||||||||| ||| |||||| |    
T  4097388 aaaataaattaagtgttttggaagtattgtatgatcatttatcatgttgttaattcaattttctaaaaaatattttataatgtccgtgattcaaaaaata 4097289  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || || |   |||  || |||||||||||||||| ||| |||||||||||||||    
T  4097288 aaagtaaactctcatcttccttcccctcctaaaccctcaatccaaacacaccct 4097235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 321 - 475
Target Start/End: Original strand, 31799014 - 31799174
Alignment:
Q  321 aataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
    |||||| ||| ||||||||||||||||||| || ||||||||||||||||||| ||||||  |||||| |||||||||| ||||||||||||||||||||    
T  31799014 aataaaaaaaatgtttttgaagtattatatgatcatttatcatgttgttaattcaatttttaaaaaattattttataatatccgtaatttaaaaaagaaa 31799113  T
Q  421 ggtgagtcctc------ccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
     || |   |||      ||||||||| ||||| |||||||| |||||||||||||||||||    
T  31799114 agtaaactctcccctgaccctccctttccctcttaaactcttcatccaaacacaccctaaa 31799174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 822 - 915
Target Start/End: Complemental strand, 9587912 - 9587819
Alignment:
Q  822 tctctggccgagttatggtgaggtaaattaagcgaccaataagcctatgatagcgtggaggatcaggatatggagagcctgaatcaagagcaag 915  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| | ||||| |||||||||||||||| ||  |||||||||||||||||    
T  9587912 tctctggccgagttatagtgaggtaaattaagcgaccaataagcctacggtagcgcggaggatcaggatatgcaggacctgaatcaagagcaag 9587819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 275 - 409
Target Start/End: Original strand, 15323272 - 15323406
Alignment:
Q  275 tcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaattt 374  Q
    ||||||||| |||||| ||||| ||||| |||||||        ||||||||| |||||||| ||| ||||||||| || |||| ||||||||||||||     
T  15323272 tcacttttattttttaaattacgaacaatgtaaaatatatttttaaaataaattaagtgtttctgatgtattatatgatcatttgtcatgttgttaattc 15323371  T
Q  375 aattttctaaaaatcattttataatgtccgtaatt 409  Q
    |||||||||||||||||||||||||||||||||||    
T  15323372 aattttctaaaaatcattttataatgtccgtaatt 15323406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 275 - 409
Target Start/End: Original strand, 15353411 - 15353544
Alignment:
Q  275 tcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaattt 374  Q
    ||||||||| |||||| ||||| ||||| ||||||||        |||||||||| |||||||||| ||||||||| || |||||| ||||||||||||     
T  15353411 tcacttttattttttaaattacgaacaatgtaaaatgtttttttgaaataaataa-gtgtttttgatgtattatatgatcatttataatgttgttaattc 15353509  T
Q  375 aattttctaaaaatcattttataatgtccgtaatt 409  Q
    |||||||||||||||||||||||||||||||||||    
T  15353510 aattttctaaaaatcattttataatgtccgtaatt 15353544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 332 - 452
Target Start/End: Complemental strand, 34176711 - 34176591
Alignment:
Q  332 tgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctc 431  Q
    |||||||||| |||||||| || |||||| || ||||||||| |||||| ||||||||| |||||||| | |||||||||||||||||| || |||| ||    
T  34176711 tgtttttgaaatattatatgatcatttattatattgttaattcaattttttaaaaatcaatttataattttcgtaatttaaaaaagaaaagtaagtcttc 34176612  T
Q  432 ccctcccttcccctcctaaac 452  Q
    ||||||| |||||||||||||    
T  34176611 ccctcccatcccctcctaaac 34176591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 337 - 471
Target Start/End: Original strand, 10818325 - 10818459
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctc 436  Q
    |||||||||||||| || ||||||||||||  ||  ||||| || |||||| ||||| ||| ||||||||||||||||| |||| || |  |||||||||    
T  10818325 ttgaagtattatatgatcatttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctc 10818424  T
Q  437 ccttcccctcctaaactctccatccaaacacaccc 471  Q
    ||| |||||||||||||||| ||||||||||||||    
T  10818425 cctacccctcctaaactctcaatccaaacacaccc 10818459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 319 - 472
Target Start/End: Complemental strand, 30487458 - 30487306
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||| |||||||||||  ||  || | ||| |||||  ||||| ||| ||||| |||||||| || ||    
T  30487458 aaaataaatcaagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtcc-taatttaacaatga 30487360  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || ||||  ||||||||||||||||||||||||| |||||||||||||||||||    
T  30487359 aaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 30487306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 327 - 403
Target Start/End: Complemental strand, 15373744 - 15373668
Alignment:
Q  327 taaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtcc 403  Q
    |||| ||||||||| ||||||||| || |||| |||||||||||||| |||||||||||||||||||||||||||||    
T  15373744 taaaatgtttttgatgtattatatgatcatttgtcatgttgttaattcaattttctaaaaatcattttataatgtcc 15373668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 378 - 475
Target Start/End: Complemental strand, 15353458 - 15353361
Alignment:
Q  378 tttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||| ||||| ||||||| | ||| |||||||||||||| ||| |||||  ||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  15353458 tttcaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagcgctctcctcccttcccctcctaaaccctcaatccaaacacaccctaaa 15353361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 337 - 469
Target Start/End: Complemental strand, 9719166 - 9719034
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctc 436  Q
    |||||||||||||| ||| |||||||  ||  ||  |||| ||| |||||| ||||  ||| ||||||||||||||||| ||||  | | ||||||||||    
T  9719166 ttgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaatcctcccctc 9719067  T
Q  437 ccttcccctcctaaactctccatccaaacacac 469  Q
    |||||||||||||||| ||| ||||||||||||    
T  9719066 ccttcccctcctaaaccctcaatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 464
Target Start/End: Original strand, 23091121 - 23091195
Alignment:
Q  391 ttttataatgtccgtaatttaaaaaa-gaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaa 464  Q
    ||||||||| |||||||||||||||| |||| || || ||||||||||||||||||||||||| |||||||||||    
T  23091121 ttttataatatccgtaatttaaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaa 23091195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 319 - 437
Target Start/End: Original strand, 31849201 - 31849319
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||| ||||||| |||  ||  |||||||| |||||  ||||||||| ||||||||||||||||| ||    
T  31849201 aaaataaatcaagtgtgattgaagtattatattattgtttatcacgttaatatgttaattttttaaaagacattttatagtgtccgtaatttaaaaatga 31849300  T
Q  419 aaggtgagtcctcccctcc 437  Q
    || ||||  ||||||||||    
T  31849301 aaagtgaaccctcccctcc 31849319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 393 - 474
Target Start/End: Original strand, 4097678 - 4097759
Alignment:
Q  393 ttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||| |||||||||||||||||||||| ||||  ||| ||||||||||||||| ||||| ||| |||||||||||| ||||    
T  4097678 ttatattgtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccctcttaaaccctcaatccaaacacactctaa 4097759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 390 - 475
Target Start/End: Complemental strand, 15323307 - 15323222
Alignment:
Q  390 attttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||||| | ||| |||||||||||||| ||| |||||  ||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  15323307 attttacattgttcgtaatttaaaaaataaaagtgagcgctctcctcccttcccctcctaaaccctcaatccaaacacaccctaaa 15323222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 337 - 477
Target Start/End: Complemental strand, 9721273 - 9721133
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctc 436  Q
    |||||||||||||| ||| |||||||  ||  ||  |||| ||| |||||| ||||  ||| ||||||||||||||||| ||||  | |  |||||||||    
T  9721273 ttgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaaccctcccctc 9721174  T
Q  437 ccttcccctcctaaactctccatccaaacacaccctaaatg 477  Q
    ||||||||||||||||  || ||||||||||||||| ||||    
T  9721173 ccttcccctcctaaaccttcaatccaaacacacccttaatg 9721133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 319 - 474
Target Start/End: Original strand, 14515562 - 14515717
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaatt-ttctaaaaatcattttataatgtccgtaatttaaaaaag 417  Q
    ||||||||| ||||||   ||||||||||||| || ||||||||||||  ||  |||| | ||| |||||| |||||||| ||| | ||||||||||| |    
T  14515562 aaaataaattaagtgtgaatgaagtattatattatcatttatcatgttcatatgttaactcttcaaaaaat-attttatagtgttcataatttaaaaatg 14515660  T
Q  418 aaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||  | |  |||||| | |||||||||||||||| |||||||||||||||||||||    
T  14515661 aaatctaaaccctccctttccttcccctcctaaaccctccatccaaacacaccctaa 14515717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 319 - 471
Target Start/End: Complemental strand, 16738149 - 16737997
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||  ||||||| || ||||||||||| ||  | ||||||||| ||| ||||||||   ||||| ||||| ||| | ||| ||||||||||| ||    
T  16738149 aaaataaagtaagtgttatttaagtattatatgatcgtatatcatgttattattttaatttatcaaaaaacatttcatagtttccataatttaaaaacga 16738050  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccc 471  Q
    || || | || ||||||| ||||| ||| ||||| ||||||||||||||||||    
T  16738049 aaagtaaatcttcccctctcttcctctcttaaaccctccatccaaacacaccc 16737997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 319 - 420
Target Start/End: Original strand, 29692969 - 29693078
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatg--------ttgttaatttaattttctaaaaatcattttataatgtccgtaattt 410  Q
    |||| |||| ||||||||||||||||||| || || ||||||||||        ||||||||||| |||||||| ||| ||||||||||||| |||||||    
T  29692969 aaaacaaattaagtgtttttgaagtattacatgatcatttatcatgattttcttttgttaatttatttttctaagaattattttataatgtctgtaattt 29693068  T
Q  411 aaaaaagaaa 420  Q
    ||||||||||    
T  29693069 aaaaaagaaa 29693078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 389 - 472
Target Start/End: Complemental strand, 23091078 - 23090995
Alignment:
Q  389 cattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||| | ||| |||||||||||| | ||| ||||| |||||||||||||||||||||||||  || |||||||||||||||    
T  23091078 cattttagattgttcgtaatttaaaagataaaagtgagccctcccctcccttcccctcctaaaccttcaatccaaacacaccct 23090995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 19278210 - 19278278
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    |||||||||||||||||||||  | |  ||||||||||||||||||||||||||||| ||||||||||||    
T  19278210 gtccgtaatttaaaaaagaaaa-taaaccctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 324 - 420
Target Start/End: Original strand, 28477076 - 28477181
Alignment:
Q  324 aaataaagtgtttttgaagtattatataattatttatcatg---------ttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaa 414  Q
    |||| ||||||||||||||||||| || || ||||||||||         ||||||||||| |||||||| ||| ||||||||||||| |||||||||||    
T  28477076 aaattaagtgtttttgaagtattacatgatcatttatcatgatttttcttttgttaatttatttttctaagaattattttataatgtctgtaatttaaaa 28477175  T
Q  415 aagaaa 420  Q
    ||||||    
T  28477176 aagaaa 28477181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 14515545 - 14515473
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||||||||||||||||||||    |  ||||||||||||||||||||||||| ||| |||||||||||||||    
T  14515545 gtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 14515473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 393 - 472
Target Start/End: Complemental strand, 10818308 - 10818229
Alignment:
Q  393 ttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||| ||||||||||||||||||||||  | |    ||||||||||||||||||||||| ||| |||||||||||||||    
T  10818308 ttatattgtccgtaatttaaaaaagaaaaataaacaatcccctcccttcccctcctaaaccctcaatccaaacacaccct 10818229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 337 - 472
Target Start/End: Original strand, 33236060 - 33236194
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctc 436  Q
    |||||| ||||||| ||| |||||||||||  ||  |||| ||| ||||||  |||| ||| ||||||||||||||||| |||| || |   ||||||||    
T  33236060 ttgaagaattatatgattgtttatcatgttaatatgttaactttttaaaaaa-atttcatagtgtccgtaatttaaaaatgaaaagtaatctctcccctc 33236158  T
Q  437 ccttcccctcctaaactctccatccaaacacaccct 472  Q
    | |||| ||| ||||||||||||||||| |||||||    
T  33236159 ctttcctctcataaactctccatccaaatacaccct 33236194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 472
Target Start/End: Complemental strand, 665994 - 665841
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaat-tttctaaaaatcattttataatgtccgtaatttaaaaaag 417  Q
    |||| |||| ||||||  |||||||||||||| || ||||||||||||  ||  ||||  ||| |||||  ||||| ||||| | | ||||||||||| |    
T  665994 aaaaaaaattaagtgtggttgaagtattatatcatcatttatcatgttaatatgttaaaatttttaaaagacatttcataatattcataatttaaaaatg 665895  T
Q  418 aaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||  |||  ||||||||| ||||||||||||||| || ||||||||||||||||    
T  665894 aaaaatgaaccctcccctcacttcccctcctaaaccct-catccaaacacaccct 665841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 472
Target Start/End: Original strand, 1300714 - 1300864
Alignment:
Q  322 ataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaag 421  Q
    |||||| ||||||  |||||||||||||| ||| ||||||| |||  ||  |||| ||| || |||  |||| ||| ||||||||||||||||| ||||     
T  1300714 ataaattaagtgtgattgaagtattatatgattgtttatcaggttaatatgttaactttttataaaatatttcatattgtccgtaatttaaaaatgaaaa 1300813  T
Q  422 gtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || |  |||||||||| |||  || | |||| |||||||||||||||||||    
T  1300814 gtaaaccctcccctccattcatcttccaaaccctccatccaaacacaccct 1300864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 428 - 474
Target Start/End: Original strand, 9298691 - 9298737
Alignment:
Q  428 cctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||||||||||||||||| | || ||||||||||||||||||    
T  9298691 cctcccctcccttcccctcctaaccccttcatccaaacacaccctaa 9298737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 337 - 438
Target Start/End: Complemental strand, 30850047 - 30849948
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctc 436  Q
    |||||||||||||| ||  ||||||||||| ||| ||||||||  ||||||  |||||||| | | ||||||||||||| |||| || | ||||||||||    
T  30850047 ttgaagtattatatgatcgtttatcatgttattattttaattt--taaaaaatattttatagtatgcgtaatttaaaaacgaaatgtaaatcctcccctc 30849950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 405 - 474
Target Start/End: Original strand, 12811157 - 12811226
Alignment:
Q  405 taatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    ||||||||| |||||| || |  ||||||||| |||||| |||||||| ||| |||||||||||||||||    
T  12811157 taatttaaagaagaaaagtaatccctcccctctcttcccatcctaaaccctcaatccaaacacaccctaa 12811226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 467
Target Start/End: Complemental strand, 19278116 - 19278039
Alignment:
Q  390 attttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacac 467  Q
    |||||||| |||| |||||||||||| |||| || |   ||| ||| |||||||||||||||| ||||||||||||||    
T  19278116 attttatagtgtcagtaatttaaaaatgaaaagtaaactctctccttccttcccctcctaaaccctccatccaaacac 19278039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 355 - 475
Target Start/End: Original strand, 1390446 - 1390566
Alignment:
Q  355 atttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactc 454  Q
    ||||||||||||  ||  |||| ||| ||||||  |||| ||| |||| |||||||||||| |||| || |  || | ||||| |||||||||||||| |    
T  1390446 atttatcatgttaatatgttaactttttaaaaaatatttcatagtgtcagtaatttaaaaatgaaaagtaaaacccctcctccattcccctcctaaaccc 1390545  T
Q  455 tccatccaaacacaccctaaa 475  Q
    | |||||||||||||| ||||    
T  1390546 ttcatccaaacacaccttaaa 1390566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 319 - 415
Target Start/End: Complemental strand, 4097665 - 4097569
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaa 415  Q
    ||||||||| ||||||  |||||||||||||| ||  |||||||||||  ||  |||| ||| |||||| ||||| | | |||||||||||||||||    
T  4097665 aaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcaaagtgtccgtaatttaaaaa 4097569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 474
Target Start/End: Complemental strand, 31798987 - 31798916
Alignment:
Q  403 cgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaa 474  Q
    |||||||||||||| ||| | ||||| || |||| |||  |||||||||| ||| |||||||||||||||||    
T  31798987 cgtaatttaaaaaataaaagcgagtcatctcctctcttatcctcctaaaccctcaatccaaacacaccctaa 31798916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 430 - 472
Target Start/End: Original strand, 9051734 - 9051776
Alignment:
Q  430 tcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||    
T  9051734 tcccctcccttcccctcttaaaccctcaatccaaacacaccct 9051776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 2892775 - 2892844
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    ||||||| ||||||||||||| || | | ||||||||||||| ||| | |||| |||||| |||||||||    
T  2892775 gtccgtagtttaaaaaagaaaagtaaattctcccctcccttcgccttccaaaccctccattcaaacacac 2892844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 382 - 471
Target Start/End: Original strand, 9719184 - 9719273
Alignment:
Q  382 taaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccc 471  Q
    |||||| ||| |||||  ||||| |||||||||||||||  | |  || |||||| ||||||||| ||||| ||| ||||||||||||||    
T  9719184 taaaaagcatgttatatagtccggaatttaaaaaagaaaattaaacccacccctctcttcccctcataaaccctcaatccaaacacaccc 9719273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 475
Target Start/End: Complemental strand, 10293332 - 10293247
Alignment:
Q  390 attttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||||| | ||| |||||||||||||| ||| ||||| |||||||||  || |  |||||||| | | ||||||||||||||||||    
T  10293332 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctctttttctttcctaaacccacaatccaaacacaccctaaa 10293247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 475
Target Start/End: Original strand, 33041662 - 33041699
Alignment:
Q  438 cttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  33041662 cttcccctcctaaactttccatccaaacacaccataaa 33041699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 319 - 473
Target Start/End: Original strand, 242307 - 242461
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| |||| |||||||| |||||||| || ||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  242307 aaaataaatgaagtatttttgaattattatatcatcatttatcatgtcgttaattcaattttttaaaaatcattttataatgtccgtaatttaaaaaaga 242406  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacccta 473  Q
    || || |  ||||||||||||||||||  |||||  |||||||||||||| ||||    
T  242407 aaagtaaaccctcccctcccttccccttataaaccatccatccaaacacagccta 242461  T

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Target: scaffold0012 (Bit Score: 78; Significance: 8e-36; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 320 - 468
Target Start/End: Original strand, 184698 - 184847
Alignment:
Q  320 aaataaataaagtgtttt-tgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    |||||||| ||||||||| ||||||||||||| || || |||||||||||||||| ||||||  ||||||||||||||||||||| ||||||||||||||    
T  184698 aaataaattaagtgttttttgaagtattatatgataatatatcatgttgttaattcaattttaaaaaaatcattttataatgtccataatttaaaaaaga 184797  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacaca 468  Q
    |  || |  |||||| |||||| ||||||||||| |||||||||||||||    
T  184798 atagtaaaccctcccttccctttccctcctaaaccctccatccaaacaca 184847  T

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Target: scaffold0240 (Bit Score: 77; Significance: 3e-35; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 329 - 472
Target Start/End: Original strand, 17641 - 17782
Alignment:
Q  329 aagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtc 428  Q
    |||||| ||||||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||| |  ||||||||||||||||| || |       
T  17641 aagtgtatttgaagtattatatgattatttatcatgttgctaattcaattttcaaaaaatcattttataatatttgtaatttaaaaaagaaaagtaa--a 17738  T
Q  429 ctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    | |||||||||||| ||||||||| |||||||||||||||||||    
T  17739 cccccctcccttccactcctaaaccctccatccaaacacaccct 17782  T

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Target: scaffold0026 (Bit Score: 71; Significance: 1e-31; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 320 - 466
Target Start/End: Complemental strand, 1549 - 1403
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    |||||||| |||| ||||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||| ||||||||||| | ||||||||||||    
T  1549 aaataaattaagtattttttaagtattatatgatcatttatcaagttgttaattcaattttctaaaaatcattctataatgtccgcagtttaaaaaagaa 1450  T
Q  420 aggtgagtcctcccctcccttcccctcctaaactctccatccaaaca 466  Q
    | || ||||||| | ||| ||| | |||||||| ||| |||||||||    
T  1449 aagtaagtcctctcatcctttctcttcctaaaccctcaatccaaaca 1403  T

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Target: scaffold0026; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 384 - 472
Target Start/End: Original strand, 1554 - 1642
Alignment:
Q  384 aaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    |||| ||||||| | ||| |||||||||||||| ||| ||||| |||||||||| |||| ||||||||| ||| || ||||||||||||    
T  1554 aaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctccattcctctcctaaaccctcaattcaaacacaccct 1642  T

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Target: scaffold0026; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 1244 - 1175
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    ||||||||||||||||||||| || |   |||||||| ||||||||||||||| ||| ||||||||||||    
T  1244 gtccgtaatttaaaaaagaaaagtaaactctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

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Target: scaffold0119 (Bit Score: 70; Significance: 4e-31; HSPs: 3)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 270 - 420
Target Start/End: Original strand, 37425 - 37575
Alignment:
Q  270 agggttcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgtt 369  Q
    |||| ||||||||| |||||| ||||| ||||| ||||||||       ||||||||| ||||||||||||||| |||||| || | |||||||||||||    
T  37425 agggctcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaatcaagtgtttttgaagtgttatatgatcacttatcatgttgtt 37524  T
Q  370 aatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaa 420  Q
    |||| | ||||||||||||||| ||||| |||| |||||||||||||||||    
T  37525 aattaagttttctaaaaatcatcttatattgtctgtaatttaaaaaagaaa 37575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 383 - 472
Target Start/End: Complemental strand, 30804 - 30715
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||| ||||||| | ||| |||||||||||||| ||| ||||| |||||||||||||  |||||||||  ||| |||||||| ||||||    
T  30804 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttgtcctcctaaatcctcaatccaaacgcaccct 30715  T

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Target: scaffold0119; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 472
Target Start/End: Complemental strand, 37472 - 37383
Alignment:
Q  383 aaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    ||||| ||||||| | ||| |||||||||||||| ||| ||||| |||||||| |||| ||||||||||  ||| || ||||| ||||||    
T  37472 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctccccttccttgccctcctaaatcctcaattcaaacgcaccct 37383  T

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Target: scaffold0071 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 320 - 420
Target Start/End: Original strand, 52977 - 53077
Alignment:
Q  320 aaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 419  Q
    ||||| || ||||||||||||| |||||||| || |||||||||||||||| || ||||||| ||||||||||| |||||| || |||||||||||||||    
T  52977 aaatacattaagtgtttttgaaatattatatgatcatttatcatgttgttagttcaattttcaaaaaatcatttcataatgcccataatttaaaaaagaa 53076  T
Q  420 a 420  Q
    |    
T  53077 a 53077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 275 - 438
Target Start/End: Original strand, 8194 - 8357
Alignment:
Q  275 tcacttttaatttttatattacaaacaacgtaaaatgnnnnnnnaaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaattt 374  Q
    ||||||||| |||||| ||||| ||||| || |||||       || |||||| || ||||||||||||||||||| || ||| |||||||||||||||     
T  8194 tcacttttattttttaaattacgaacaatgtgaaatgtctttttaagataaattaactgtttttgaagtattatatgatcattaatcatgttgttaattc 8293  T
Q  375 aattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctccc 438  Q
    |||||| ||||||| ||||||||| |||  ||| ||||||||| || || || |||||||||||    
T  8294 aattttttaaaaataattttataacgtctttaaattaaaaaaggaatgtaagccctcccctccc 8357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 54; Significance: 2e-21; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 339 - 475
Target Start/End: Complemental strand, 39320 - 39183
Alignment:
Q  339 gaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcct-cccctcc 437  Q
    |||||||||||| || ||||||||||||  ||  |||| ||| |||||| ||||| ||| ||||||||||||||||| |||| || |  ||| ||||||     
T  39320 gaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctccccctca 39221  T
Q  438 cttcccctcctaaactctccatccaaacacaccctaaa 475  Q
     |||||||||||||| ||||||||||||||||||||||    
T  39220 tttcccctcctaaaccctccatccaaacacaccctaaa 39183  T

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Target: scaffold0067; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 477
Target Start/End: Original strand, 39362 - 39439
Alignment:
Q  400 gtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaatg 477  Q
    ||||||||||||||||||||| || |  ||||||||||||| |||| |||||| ||| ||||||||||||||| ||||    
T  39362 gtccgtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacacccttaatg 39439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1414 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold1414
Description:

Target: scaffold1414; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 329 - 416
Target Start/End: Original strand, 402 - 490
Alignment:
Q  329 aagtgtttttgaagtattatataattatttatcatgttgttaa-tttaattttctaaaaatcattttataatgtccgtaatttaaaaaa 416  Q
    |||||||||||||||||| ||| || |||||||||| |||||| ||||||||||||||||||||||||||||  | ||| |||||||||    
T  402 aagtgtttttgaagtattttattatcatttatcatgctgttaattttaattttctaaaaatcattttataatacctgtagtttaaaaaa 490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 319 - 472
Target Start/End: Complemental strand, 16449 - 16296
Alignment:
Q  319 aaaataaataaagtgtttttgaagtattatataattatttatcatgttgttaatttaattttctaaaaatcattttataatgtccgtaatttaaaaaaga 418  Q
    ||||||||| ||||||  |||||||||||||| ||| |||||||||||  ||  ||||  || || ||| ||||| ||| ||| | ||||||||||| ||    
T  16449 aaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaacgttttataaaacatttcatagtgttcataatttaaaaatga 16350  T
Q  419 aaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccct 472  Q
    || || |  |||||||||| || ||||||||||| ||||||||||||| |||||    
T  16349 aaagtaaaccctcccctccttttccctcctaaaccctccatccaaacaaaccct 16296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 384 - 469
Target Start/End: Complemental strand, 3235 - 3150
Alignment:
Q  384 aaaatcattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacac 469  Q
    |||| ||||| ||| |||| ||||||||||||||||| || |   |||||||||||||||||||||||||||| ||||||||||||    
T  3235 aaaaacatttcatagtgtctgtaatttaaaaaagaaaagtaaactctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 404 - 475
Target Start/End: Complemental strand, 6652 - 6581
Alignment:
Q  404 gtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacaccctaaa 475  Q
    ||||||||||||||||| || |  |||||||||||||| |||||||||   || ||||||||||||||||||    
T  6652 gtaatttaaaaaagaaaagtaaaccctcccctcccttctcctcctaaaacttcaatccaaacacaccctaaa 6581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 37913 - 37946
Alignment:
Q  337 ttgaagtattatataattatttatcatgttgtta 370  Q
    ||||||||||||||||||||||||||||||||||    
T  37913 ttgaagtattatataattatttatcatgttgtta 37946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 389 - 470
Target Start/End: Complemental strand, 122067 - 121987
Alignment:
Q  389 cattttataatgtccgtaatttaaaaaagaaaggtgagtcctcccctcccttcccctcctaaactctccatccaaacacacc 470  Q
    ||||||||||||| |||||||| ||||||||| |  | |||||||||| | ||  ||||||||| ||| |||||||||||||    
T  122067 cattttataatgttcgtaattttaaaaagaaaagcaaatcctcccctctc-tcttctcctaaaccctcaatccaaacacacc 121987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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