View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2911-6-Insertion-23 (Length: 132)
Name: NF2911-6-Insertion-23
Description: NF2911-6
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2911-6-Insertion-23 |
 | |
|
| [»] chr8 (1 HSPs) |
| |
|
Alignment Details
Target: chr8 (Bit Score: 125; Significance: 9e-65; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 125; E-Value: 9e-65
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 32815697 - 32815573
Alignment:
| Q |
8 |
ccagttgttgcgttgaatgaaagaatactttcttccatggctgataagaaagatgctgctgctcatccatggcatgacttagagattggtattattatta |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32815697 |
ccagttgttgcgttgaatgaaagaatactttcttccatggctgataagaaagatgctgctgctcatccatggcatgacttagagattggtattattatta |
32815598 |
T |
|
| Q |
108 |
actaactcttttttacgtttcttta |
132 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
32815597 |
actaactcttttttacgtttcttta |
32815573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University