View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2911-Insertion-38 (Length: 311)
Name: NF2911-Insertion-38
Description: NF2911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2911-Insertion-38 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 2 - 311
Target Start/End: Original strand, 43673563 - 43673872
Alignment:
| Q |
2 |
ccaacaaaaagttgtttgtgctggttctttaatttatccatccacaagtatatannnnnnnnnnnnnnnnnnatgttccatcgcaataatttatatgctg |
101 |
Q |
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| T |
43673563 |
ccaataaaaagttgtttgtgctggttctttaatttatccatccacaagtatatatttttattttatttttttatgttccatcgcaataatttatatgctg |
43673662 |
T |
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| Q |
102 |
tatttgatcattgatagcacaagtacttgattcccattaaaaatagtgtagaatattttttgtggtcatatcattggctacttattaattatatttcctt |
201 |
Q |
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| T |
43673663 |
tatttgatcattgatagcacaagtacttgattcccattaaaaatagtgtagaatattttttgtggtcatatcattggctacttattaattatatttcctt |
43673762 |
T |
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| Q |
202 |
ttcattacaaatttcagaatgacgtgaaaagatcaaagaaaaagaggatggaaatatctgaattcttgtttttaattttcaccttattgatcacttgtct |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43673763 |
ttcattacaaatttcagaatgacgtgaaaagatcaaagaaaaagaggatggaaatatctgaattcttgtttttaattttcaccttattgatcacttgtct |
43673862 |
T |
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| Q |
302 |
atatatattg |
311 |
Q |
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| T |
43673863 |
atatatattg |
43673872 |
T |
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