View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2911-Insertion-42 (Length: 148)
Name: NF2911-Insertion-42
Description: NF2911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2911-Insertion-42 |
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Alignment Details
Target: chr7 (Bit Score: 136; Significance: 3e-71; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 136; E-Value: 3e-71
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 46962158 - 46962019
Alignment:
| Q |
8 |
aaatgagcatgctgaaagaacattttgtgaaagtagcctgtcctgattttgcaaatgcaaaggtccttgttcatctacaccaactgtcacaagtacatat |
107 |
Q |
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| T |
46962158 |
aaatgagcatgctgaaagaacattttgtgaaagtagcctgtcctgattgtgcaaatgcaaaggtccttgttcatctacaccaactgtcacaagtacatat |
46962059 |
T |
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| Q |
108 |
ataccatcaattgctcctacacacaaaccttaaaatatga |
147 |
Q |
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| T |
46962058 |
ataccatcaattgctcctacacacaaaccttaaaatatga |
46962019 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 49; Significance: 2e-19; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 25183558 - 25183494
Alignment:
| Q |
66 |
aaaggtccttgttcatctacaccaactgtcacaagtacatatataccatcaattgctcctacaca |
130 |
Q |
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| T |
25183558 |
aaaggtccttgctcatctacaccaacggtcacaggtacatatataccatcaattgctcccacaca |
25183494 |
T |
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