View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2911-Insertion-8 (Length: 1073)
Name: NF2911-Insertion-8
Description: NF2911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2911-Insertion-8 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 945; Significance: 0; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 945; E-Value: 0
Query Start/End: Original strand, 8 - 1047
Target Start/End: Complemental strand, 19937567 - 19936524
Alignment:
| Q |
8 |
ctcctaacacatccttcggtccaattttgtttattccattcctctttgttccttggctcaaaccctttcaaacagctacatattggtgagctttgtgaat |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19937567 |
ctcctaacacatccttcggtccaattttgtttattccattcctctttgttccttggctcaaaccctttcaaacagctacatattggtgagctttgtgaat |
19937468 |
T |
|
| Q |
108 |
tacagcttgcaaaatgtccacatacaccataaacatcacattccatttcatgactattccatgttactttccattctttcttcttttcatcccaccattt |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19937467 |
tacagcttgcaaaatgtccacatacaccataaacatcacattccatttcatgactattccatgttactttccattctttcttcttttcatcccaccattt |
19937368 |
T |
|
| Q |
208 |
ctcttcacaatttccttctgaactcaaattatagattataagaccaactgtatctgatgttatttgaaagaatgaaacatttccttctccatcatctcca |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19937367 |
ctcttcacaatttccttctgaactcaaattatagattataagaccaactgtatctgatgttatttgaaagaatgaaacatttccttctccatcatctcca |
19937268 |
T |
|
| Q |
308 |
acatgtaaaccaccgagataatgagttgtcatatatggaagccctgtaaaaatcttaccattccacggaccagttcgccaatacggttgattttcattcc |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
19937267 |
acatgtaaaccaccgagataatgagttgtcatatatggaagccctgtaaaaatcttaccattccacggaccagttcgccaatatggttgattttcattcc |
19937168 |
T |
|
| Q |
408 |
atatgaacacttcaggtattgtaagcctttcaacactcaaagagaagcttccaatggatggatcataaggtattttccatgatgtttgttttactttctc |
507 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
19937167 |
atatgaacacttcaggtatagtaagcctttcaacactcaaagagaagcttccaatggatggatcataaggtgttttccatgatgtttgttttactttctc |
19937068 |
T |
|
| Q |
508 |
acctgttattttgttgctagtaagtttcatgtttggcagcattacatttgaaggatgctggaaactctcccacatggttctttctgttgtgccttcaagt |
607 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19937067 |
acctgttattttgttgctagtaagtttcatgtttggcagcattacatttgaaggatgctggaaactctcccacatggttctttctgttgtgccttcaagt |
19936968 |
T |
|
| Q |
608 |
agtacaaggttccctgaatctaaaagcttcaaacttgaattggttgcaacattcggtgcgttggatgtccaaatcacctctttctttccattcaatacca |
707 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
19936967 |
agtacaaggttccctgaatctaaaagcttcgaacttgaattggttgcaacattcggtgcgttggatgtccaaatcacctctttctttccgttcaatacca |
19936868 |
T |
|
| Q |
708 |
caagatcattgccatcatcagatattttaacaacaccagaagaatctttgagaggttggtctctgttaagcacccataggattgtgaattgaggctgcca |
807 |
Q |
| |
|
| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
19936867 |
cgagatcattaccattatcagatattttaacaacaccagaagaatctttgagaggttggtctctgttaagcacccataggattgtgaaatgaggctgcca |
19936768 |
T |
|
| Q |
808 |
ccaaattccgacatagcgattcgtagaattttcaggactaaaaaagcctaaggtgaagttaccactcttggagcttagagtttcagggtccttgataaag |
907 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19936767 |
ccaaattccaacataacgattcgtagaattttcaggactaaaaaagcctaaggtgaagttaccactcttggagcttagagtttcagggtccttgataaac |
19936668 |
T |
|
| Q |
908 |
tgagttgatgtaatggtgtctatggcatcactaacatctagaaaattaaaacaccagcatggtc-aaatg-agaacatgaacatatttttgt-attgttg |
1004 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
19936667 |
tgagttgatgtaatggtgtctatggcatcactaacatctagaaaattaaaaca-cagcatggtcaaaatgaagaacatgaacatatttttgtaattgttg |
19936569 |
T |
|
| Q |
1005 |
aaatccattactgagatga-tgcttctag-tatgataaattatga |
1047 |
Q |
| |
|
|||| |||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
19936568 |
aaattcattactgagatgattgcttctagttatgataaattatga |
19936524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 945; E-Value: 0
Query Start/End: Original strand, 8 - 1047
Target Start/End: Complemental strand, 19968706 - 19967663
Alignment:
| Q |
8 |
ctcctaacacatccttcggtccaattttgtttattccattcctctttgttccttggctcaaaccctttcaaacagctacatattggtgagctttgtgaat |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19968706 |
ctcctaacacatccttcggtccaattttgtttattccattcctctttgttccttggctcaaaccctttcaaacagctacatattggtgagctttgtgaat |
19968607 |
T |
|
| Q |
108 |
tacagcttgcaaaatgtccacatacaccataaacatcacattccatttcatgactattccatgttactttccattctttcttcttttcatcccaccattt |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19968606 |
tacagcttgcaaaatgtccacatacaccataaacatcacattccatttcatgactattccatgttactttccattctttcttcttttcatcccaccattt |
19968507 |
T |
|
| Q |
208 |
ctcttcacaatttccttctgaactcaaattatagattataagaccaactgtatctgatgttatttgaaagaatgaaacatttccttctccatcatctcca |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19968506 |
ctcttcacaatttccttctgaactcaaattatagattataagaccaactgtatctgatgttatttgaaagaatgaaacatttccttctccatcatctcca |
19968407 |
T |
|
| Q |
308 |
acatgtaaaccaccgagataatgagttgtcatatatggaagccctgtaaaaatcttaccattccacggaccagttcgccaatacggttgattttcattcc |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
19968406 |
acatgtaaaccaccgagataatgagttgtcatatatggaagccctgtaaaaatcttaccattccacggaccagttcgccaatatggttgattttcattcc |
19968307 |
T |
|
| Q |
408 |
atatgaacacttcaggtattgtaagcctttcaacactcaaagagaagcttccaatggatggatcataaggtattttccatgatgtttgttttactttctc |
507 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
19968306 |
atatgaacacttcaggtatagtaagcctttcaacactcaaagagaagcttccaatggatggatcataaggtgttttccatgatgtttgttttactttctc |
19968207 |
T |
|
| Q |
508 |
acctgttattttgttgctagtaagtttcatgtttggcagcattacatttgaaggatgctggaaactctcccacatggttctttctgttgtgccttcaagt |
607 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19968206 |
acctgttattttgttgctagtaagtttcatgtttggcagcattacatttgaaggatgctggaaactctcccacatggttctttctgttgtgccttcaagt |
19968107 |
T |
|
| Q |
608 |
agtacaaggttccctgaatctaaaagcttcaaacttgaattggttgcaacattcggtgcgttggatgtccaaatcacctctttctttccattcaatacca |
707 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
19968106 |
agtacaaggttccctgaatctaaaagcttcgaacttgaattggttgcaacattcggtgcgttggatgtccaaatcacctctttctttccgttcaatacca |
19968007 |
T |
|
| Q |
708 |
caagatcattgccatcatcagatattttaacaacaccagaagaatctttgagaggttggtctctgttaagcacccataggattgtgaattgaggctgcca |
807 |
Q |
| |
|
| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
19968006 |
cgagatcattaccattatcagatattttaacaacaccagaagaatctttgagaggttggtctctgttaagcacccataggattgtgaaatgaggctgcca |
19967907 |
T |
|
| Q |
808 |
ccaaattccgacatagcgattcgtagaattttcaggactaaaaaagcctaaggtgaagttaccactcttggagcttagagtttcagggtccttgataaag |
907 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19967906 |
ccaaattccaacataacgattcgtagaattttcaggactaaaaaagcctaaggtgaagttaccactcttggagcttagagtttcagggtccttgataaac |
19967807 |
T |
|
| Q |
908 |
tgagttgatgtaatggtgtctatggcatcactaacatctagaaaattaaaacaccagcatggtc-aaatg-agaacatgaacatatttttgt-attgttg |
1004 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
19967806 |
tgagttgatgtaatggtgtctatggcatcactaacatctagaaaattaaaaca-cagcatggtcaaaatgaagaacatgaacatatttttgtaattgttg |
19967708 |
T |
|
| Q |
1005 |
aaatccattactgagatga-tgcttctag-tatgataaattatga |
1047 |
Q |
| |
|
|||| |||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
19967707 |
aaattcattactgagatgattgcttctagttatgataaattatga |
19967663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 688 - 953
Target Start/End: Original strand, 20170249 - 20170511
Alignment:
| Q |
688 |
tttctttccattcaataccacaagatcattgccatcatcagatattttaacaacaccagaagaatctttgagaggttggtctctgttaagcacccatagg |
787 |
Q |
| |
|
||||| |||||||||||||||||||| | ||||| ||| ||||| | |||| ||| |||||| || || |||| || ||||||| |||||||| | |
|
|
| T |
20170249 |
tttctgtccattcaataccacaagat---ttccatcttcaaatattgtgacaatcccattagaatcattcagtggttagtttctgttagccacccatatg |
20170345 |
T |
|
| Q |
788 |
attgtgaattgaggctgccaccaaattccgacatagcgattcgtagaattttcaggactaaaaaagcctaaggtgaagttaccactcttggagcttagag |
887 |
Q |
| |
|
||||| |||||| || |||||||||||| || ||||| || |||||||||| ||| ||||| || || |||||||||||||| |||||| |||||| |
|
|
| T |
20170346 |
attgtagattgagacttccaccaaattccaacgtagcggtttgtagaatttttagggctaaagaatccaaaggtgaagttaccgtctttggagattagag |
20170445 |
T |
|
| Q |
888 |
tttcagggtccttgataaagtgagttgatgtaatggtgtctatggcatcactaacatctagaaaat |
953 |
Q |
| |
|
|||||||||| |||||||| |||| |||||| ||||||||||| || ||||||||| ||| |||| |
|
|
| T |
20170446 |
tttcagggtctttgataaattgagatgatgtgatggtgtctataccaacactaacatgtagcaaat |
20170511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 688 - 953
Target Start/End: Original strand, 20172242 - 20172504
Alignment:
| Q |
688 |
tttctttccattcaataccacaagatcattgccatcatcagatattttaacaacaccagaagaatctttgagaggttggtctctgttaagcacccatagg |
787 |
Q |
| |
|
||||| |||||||||||||||||||| | ||||| ||| ||||| | |||| ||| |||||| || || |||| || ||||||| |||||||| | |
|
|
| T |
20172242 |
tttctgtccattcaataccacaagat---ttccatcttcaaatattgtgacaatcccattagaatcattcagtggttagtttctgttagccacccatatg |
20172338 |
T |
|
| Q |
788 |
attgtgaattgaggctgccaccaaattccgacatagcgattcgtagaattttcaggactaaaaaagcctaaggtgaagttaccactcttggagcttagag |
887 |
Q |
| |
|
||||| |||||| || |||||||||||| || ||||| || |||||||||| ||| ||||| || || |||||||||||||| |||||| |||||| |
|
|
| T |
20172339 |
attgtagattgagacttccaccaaattccaacgtagcggtttgtagaatttttagggctaaagaatccaaaggtgaagttaccgtctttggagattagag |
20172438 |
T |
|
| Q |
888 |
tttcagggtccttgataaagtgagttgatgtaatggtgtctatggcatcactaacatctagaaaat |
953 |
Q |
| |
|
|||||||||| |||||||| |||| |||||| ||||||||||| || ||||||||| ||| |||| |
|
|
| T |
20172439 |
tttcagggtctttgataaattgagatgatgtgatggtgtctataccaacactaacatgtagcaaat |
20172504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 135 - 368
Target Start/End: Original strand, 47602241 - 47602464
Alignment:
| Q |
135 |
cataaacatcacattccatttcatgactattccatgttactttccattctttcttcttttcatcccaccatttctcttcacaatttccttctgaactcaa |
234 |
Q |
| |
|
||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
47602241 |
cataaacatcacattccatttgagaactattccacgttactttccattctttcttcttttcaccccaccatttctcttcaaaatttccttctga------ |
47602334 |
T |
|
| Q |
235 |
attatagattataagaccaactgtatctgatgttatttg----aaagaatgaaacatttccttctccatcatctccaacatgtaaaccaccgagataatg |
330 |
Q |
| |
|
|||| ||||||||||||| ||| |||| |||||||||||| |||| |||||||| ||| |||||||||| |||| |||||| |
|
|
| T |
47602335 |
--------ttatgagaccaactgtattcaccgttgtttgttacaaagaatgaaacgtttctttctccattatcaccaacatgtataccattgagatatca |
47602426 |
T |
|
| Q |
331 |
agttgtcatatatggaagccctgtaaaaatcttaccat |
368 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||| ||||| |
|
|
| T |
47602427 |
agttttcatatatggaagccctttaaaaatctcaccat |
47602464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 779 - 944
Target Start/End: Complemental strand, 20229446 - 20229281
Alignment:
| Q |
779 |
acccataggattgtgaattgaggctgccaccaaattccgacatagcgattcgtagaattttcaggactaaaaaagcctaaggtgaagttaccactcttgg |
878 |
Q |
| |
|
||||||| |||||| |||||| || |||||||||||| || ||||| || |||||||||| ||| ||||| || || ||||||||||||||| |||| |
|
|
| T |
20229446 |
acccatatgattgtagattgagacttccaccaaattccaacgtagcggtttgtagaatttttagggctaaagaatccaaaggtgaagttaccatctttgg |
20229347 |
T |
|
| Q |
879 |
agcttagagtttcagggtccttgataaagtgagttgatgtaatggtgtctatggcatcactaacat |
944 |
Q |
| |
|
|| |||||||||||||||| |||||||| |||| |||||| ||||||||||| || ||||||||| |
|
|
| T |
20229346 |
agattagagtttcagggtctttgataaattgagatgatgtgatggtgtctataccaacactaacat |
20229281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 779 - 944
Target Start/End: Complemental strand, 20262029 - 20261864
Alignment:
| Q |
779 |
acccataggattgtgaattgaggctgccaccaaattccgacatagcgattcgtagaattttcaggactaaaaaagcctaaggtgaagttaccactcttgg |
878 |
Q |
| |
|
||||||| |||||| |||||| || |||||||||||| || ||||| || |||||||||| ||| ||||| || || ||||||||||||||| |||| |
|
|
| T |
20262029 |
acccatatgattgtagattgagacttccaccaaattccaacgtagcggtttgtagaatttttagggctaaagaatccaaaggtgaagttaccatctttgg |
20261930 |
T |
|
| Q |
879 |
agcttagagtttcagggtccttgataaagtgagttgatgtaatggtgtctatggcatcactaacat |
944 |
Q |
| |
|
|| |||||||||||||||| |||||||| |||| |||||| ||||||||||| || ||||||||| |
|
|
| T |
20261929 |
agattagagtttcagggtctttgataaattgagatgatgtgatggtgtctataccaacactaacat |
20261864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 591 - 718
Target Start/End: Original strand, 47602475 - 47602602
Alignment:
| Q |
591 |
ctgttgtgccttcaagtagtacaaggttccctgaatctaaaagcttcaaacttgaattggttgcaacattcggtgcgttggatgtccaaatcacctcttt |
690 |
Q |
| |
|
||||| ||| |||||||||||||||| || ||||| ||||||| || |||| ||||||||||||| |||||| || || |||| | |||||||||||| |
|
|
| T |
47602475 |
ctgttctgcattcaagtagtacaaggctctctgaacctaaaagtttggaactcgaattggttgcaatattcggcgcttttgatgactaaatcacctcttc |
47602574 |
T |
|
| Q |
691 |
ctttccattcaataccacaagatcattg |
718 |
Q |
| |
|
||||||||||| |||||||||||||||| |
|
|
| T |
47602575 |
ctttccattcagtaccacaagatcattg |
47602602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 688 - 926
Target Start/End: Complemental strand, 20271686 - 20271451
Alignment:
| Q |
688 |
tttctttccattcaataccacaagatcattgccatcatcagatattttaacaacaccagaagaatctttgagaggttggtctctgttaagcacccatagg |
787 |
Q |
| |
|
||||| |||||||||||||||||||| | ||||| ||||||||| | |||| ||| || ||| || | ||||||| |||||| |||||||| | |
|
|
| T |
20271686 |
tttctgtccattcaataccacaagat---ttccatcttcagatattgtgacaatcccattagtatcattcaatggttggtttctgtttgccacccatatg |
20271590 |
T |
|
| Q |
788 |
attgtgaattgaggctgccaccaaattccgacatagcgattcgtagaattttcaggactaaaaaagcctaaggtgaagttaccactcttggagcttagag |
887 |
Q |
| |
|
|| || |||||| || |||||||||||| |||||||| || |||||||||| || |||||| || || ||||||||||||||| |||||| |||||| |
|
|
| T |
20271589 |
atagtagattgagacttccaccaaattccaacatagcggtttgtagaatttttagcactaaagaatcccaaggtgaagttaccatctttggaggttagag |
20271490 |
T |
|
| Q |
888 |
tttcagggtccttgataaagtgagttgatgtaatggtgt |
926 |
Q |
| |
|
||||||||| |||||| | |||| |||||| ||||||| |
|
|
| T |
20271489 |
cttcagggtctttgatatattgagatgatgtgatggtgt |
20271451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 748 - 934
Target Start/End: Complemental strand, 20292436 - 20292250
Alignment:
| Q |
748 |
agaatctttgagaggttggtctctgttaagcacccataggattgtgaattgaggctgccaccaaattccgacatagcgattcgtagaattttcaggacta |
847 |
Q |
| |
|
|||||| || || ||||||| |||||| |||||||| |||||| | |||| || |||||||||||| || |||||||| ||||| |||| ||||||| |
|
|
| T |
20292436 |
agaatcattcagtggttggtttctgttcgccacccatatgattgtagactgagacttccaccaaattccaacgtagcgatttgtagagtttttaggacta |
20292337 |
T |
|
| Q |
848 |
aaaaagcctaaggtgaagttaccactcttggagcttagagtttcagggtccttgataaagtgagttgatgtaatggtgtctatggca |
934 |
Q |
| |
|
|| || || ||||||||||||||| |||||| | |||||||||| ||||||||| || || | |||||| ||||||| ||||||| |
|
|
| T |
20292336 |
aagaatccaaaggtgaagttaccatctttggagataagagtttcagcgtccttgatgaattgggatgatgtgatggtgtttatggca |
20292250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 778 - 929
Target Start/End: Complemental strand, 20281913 - 20281762
Alignment:
| Q |
778 |
cacccataggattgtgaattgaggctgccaccaaattccgacatagcgattcgtagaattttcaggactaaaaaagcctaaggtgaagttaccactcttg |
877 |
Q |
| |
|
|||||| | |||||| |||||| || |||||||||||| |||| |||||| ||||||||| | | ||||| || || ||||||||||||||| ||| |
|
|
| T |
20281913 |
cacccacatgattgtagattgagacttccaccaaattccaacattgcgatttgtagaatttctacggctaaagaatcccaaggtgaagttaccatctttg |
20281814 |
T |
|
| Q |
878 |
gagcttagagtttcagggtccttgataaagtgagttgatgtaatggtgtcta |
929 |
Q |
| |
|
||| |||||||||||||||| |||||||| |||| |||||| || ||||||| |
|
|
| T |
20281813 |
gagattagagtttcagggtctttgataaattgagatgatgttatagtgtcta |
20281762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 20293176 - 20293037
Alignment:
| Q |
8 |
ctcctaacacatccttcggtccaattttgtttattccattcctctttgttccttggctcaaaccctttcaaacagctacatattggtgagctttgtgaat |
107 |
Q |
| |
|
||||||||||| || |||||||||| |||||| ||||||| ||| |||| || || |||| ||| ||||||||||||||||||||||||| |||| |
|
|
| T |
20293176 |
ctcctaacacacccaccggtccaattatgtttactccattcttctatgtttctgggtacaaatcctctcaaacagctacatattggtgagctcaatgaac |
20293077 |
T |
|
| Q |
108 |
tacagcttgcaaaatgtccacatacaccataaacatcaca |
147 |
Q |
| |
|
||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
20293076 |
tacagcttgcaaaggccccacatataccataaacatcaca |
20293037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 47602093 - 47602182
Alignment:
| Q |
8 |
ctcctaacacatccttcggtccaattttgtttattccattcctctttgttccttggctcaaaccctttcaaacagctacatattggtgag |
97 |
Q |
| |
|
||||||||||| || | ||||| |||||| ||||||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||| |
|
|
| T |
47602093 |
ctcctaacacacccaccagtccatttttgtctattccatttctctttgttccttggttcaaaccctttcaaatagctacatattagtgag |
47602182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 879 - 957
Target Start/End: Original strand, 47602644 - 47602721
Alignment:
| Q |
879 |
agcttagagtttcagggtccttgataaagtgagttgatgtaatggtgtctatggcatcactaacatctagaaaattaaa |
957 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||| |||||| |||| |||| ||||||| ||||||||| |
|
|
| T |
47602644 |
agcttagagtttcagggtccttgataaactgagttgatgtaatagtgtctctggcgacactgacatcta-aaaattaaa |
47602721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 805 - 934
Target Start/End: Complemental strand, 20296805 - 20296676
Alignment:
| Q |
805 |
ccaccaaattccgacatagcgattcgtagaattttcaggactaaaaaagcctaaggtgaagttaccactcttggagcttagagtttcagggtccttgata |
904 |
Q |
| |
|
|||||||||||| ||||||||||| ||||| ||| ||||||||| | || ||||||||||||||| || ||| |||||||||||||||||||||| |
|
|
| T |
20296805 |
ccaccaaattccaacatagcgatttgtagagtttataggactaaagcatccaaaggtgaagttaccatcttttgagattagagtttcagggtccttgatg |
20296706 |
T |
|
| Q |
905 |
aagtgagttgatgtaatggtgtctatggca |
934 |
Q |
| |
|
|| || | ||||| || |||||||||||| |
|
|
| T |
20296705 |
aattgggaagatgttatagtgtctatggca |
20296676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 890 - 1024
Target Start/End: Original strand, 19980749 - 19980885
Alignment:
| Q |
890 |
tcagggtccttgataaagtgagttgatgtaatggtgtctatggcatcactaacatctagaaaattaaaacaccagcatggtc-aaatg-agaacatgaac |
987 |
Q |
| |
|
|||| |||||| ||||| | |||||||||||| |||| ||||||| ||||||| ||||||||||||||||| |||| | || ||||| |||||| ||| |
|
|
| T |
19980749 |
tcagtgtccttcataaactaagttgatgtaatagtgtatatggcaacactaacttctagaaaattaaaaca-tagcaggatcaaaatgaagaacagaaac |
19980847 |
T |
|
| Q |
988 |
atatttttgt-attgttgaaatccattactgagatgat |
1024 |
Q |
| |
|
|||||| ||| |||| |||||||||||||| ||||||| |
|
|
| T |
19980848 |
atatttgtgtaattgctgaaatccattactaagatgat |
19980885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 671 - 898
Target Start/End: Original strand, 20092260 - 20092484
Alignment:
| Q |
671 |
gatgtccaaatcacctctttctttccattcaataccacaagatcattgccatcatcagatattttaacaacaccagaagaatctttgagaggttggtctc |
770 |
Q |
| |
|
|||| |||||| || | |||||||||||| ||||||||||||| | ||||| ||| ||||| | |||| ||| |||||| || || ||||||| || |
|
|
| T |
20092260 |
gatgaccaaatgacttgtttctttccatttaataccacaagat---ttccatcttcaaatattatgacaatcccattagaatcattcagtggttggtttc |
20092356 |
T |
|
| Q |
771 |
tgttaagcacccataggattgtgaattgaggctgccaccaaattccgacatagcgattcgtagaattttcaggactaaaaaagcctaaggtgaagttacc |
870 |
Q |
| |
|
|||| |||||||| || | | |||||| || |||||||||||| || |||||| | ||||| ||| ||| ||||| || || |||||||||||||| |
|
|
| T |
20092357 |
tgtttgccacccatatgaatctagattgagacttccaccaaattccaacgtagcgacttgtagagtttgtagggctaaagaatccaaaggtgaagttacc |
20092456 |
T |
|
| Q |
871 |
actcttggagcttagagtttcagggtcc |
898 |
Q |
| |
|
|| |||||| ||||| ||||||||||| |
|
|
| T |
20092457 |
acctttggagattagattttcagggtcc |
20092484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 20242110 - 20242025
Alignment:
| Q |
65 |
tcaaaccctttcaaacagctacatattggtgagctttgtgaattacagcttgcaaaatgtccacatacaccataaacatcacattc |
150 |
Q |
| |
|
||||| ||||||||||| || || | ||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||| |
|
|
| T |
20242110 |
tcaaatcctttcaaacaactgcaaactggtgagctcaatgaattacagcttgtaaaatctccacatagaccataaacatcacattc |
20242025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 20262743 - 20262603
Alignment:
| Q |
65 |
tcaaaccctttcaaacagctacatattggtgagctttgtgaattacagcttgcaaaatgtccacatacaccataaacatcacattccatttcatgactat |
164 |
Q |
| |
|
||||| ||||||||||| || |||| |||||||| |||||||||||||| ||| | |||||| | |||||||||||||||||| | | || || | |
|
|
| T |
20262743 |
tcaaatcctttcaaacaactgcataccggtgagctcaatgaattacagcttgtaaattctccacagagaccataaacatcacattctgtgttttggcttt |
20262644 |
T |
|
| Q |
165 |
tccatgttactttccattctttcttcttttcatcccaccat |
205 |
Q |
| |
|
||||||| |||||| |||||| ||||| |||||||||||| |
|
|
| T |
20262643 |
tccatgtcactttcatttctttattcttatcatcccaccat |
20262603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 694 - 903
Target Start/End: Complemental strand, 20287116 - 20286910
Alignment:
| Q |
694 |
tccattcaataccacaagatcattgccatcatcagatattttaacaacaccagaagaatctttgagaggttggtctctgttaagcacccataggattgtg |
793 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||||||| | |||| ||| |||||| | || |||| || |||||| |||||||| ||||| |
|
|
| T |
20287116 |
tccattcaataccacaagat---ttccatcctcagatattgtgacaatcccattagaatcacttagtggtttgtttctgtttgccacccatatgattgaa |
20287020 |
T |
|
| Q |
794 |
aattgaggctgccaccaaattccgacatagcgattcgtagaattttcaggactaaaaaagcctaaggtgaagttaccactcttggagcttagagtttcag |
893 |
Q |
| |
|
|||||| || |||||||||||| ||||||||||| ||||| |||| ||| ||||| || || |||||||| |||||| |||||| ||||||| ||| |
|
|
| T |
20287019 |
gattgagacttccaccaaattccaacatagcgatttgtagagtttttagggctaaagaatccaaaggtgaaattaccatctttggagagtagagttccag |
20286920 |
T |
|
| Q |
894 |
ggtccttgat |
903 |
Q |
| |
|
|||| ||||| |
|
|
| T |
20286919 |
ggtctttgat |
20286910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 452 - 537
Target Start/End: Complemental strand, 20287358 - 20287273
Alignment:
| Q |
452 |
aagcttccaatggatggatcataaggtattttccatgatgtttgttttactttctcacctgttattttgttgctagtaagtttcat |
537 |
Q |
| |
|
|||||||||| |||||||| |||| ||||||||||||| ||| |||||||||||||||| ||||||| || ||||||||||| |
|
|
| T |
20287358 |
aagcttccaacagatggatctgaagggtttttccatgatgtgagttgtactttctcacctgttcttttgtttcttgtaagtttcat |
20287273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 20169585 - 20169681
Alignment:
| Q |
24 |
cggtccaattttgtttattccattcctctttgttccttggctcaaaccctttcaaacagctacatattggtgagctttgtgaattacagcttgcaaa |
120 |
Q |
| |
|
||||||| || ||| ||||||||| ||| |||| || || ||||||||| |||||||||||||| |||||||||| ||||||||| |||||||| |
|
|
| T |
20169585 |
cggtccagttatgtatattccattgttctatgtttctgggttcaaaccctctcaaacagctacatgttggtgagctcaatgaattacaacttgcaaa |
20169681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 761 - 892
Target Start/End: Complemental strand, 20241414 - 20241283
Alignment:
| Q |
761 |
ggttggtctctgttaagcacccataggattgtgaattgaggctgccaccaaattccgacatagcgattcgtagaattttcaggactaaaaaagcctaagg |
860 |
Q |
| |
|
||||||| |||||| |||||||| |||||| |||||| || |||||||||||| || ||||| || |||||||||| ||| ||||| || || || | |
|
|
| T |
20241414 |
ggttggtttctgtttgccacccatatgattgtagattgagacttccaccaaattccaacgtagcggtttgtagaatttttagggctaaagaatccaaaag |
20241315 |
T |
|
| Q |
861 |
tgaagttaccactcttggagcttagagtttca |
892 |
Q |
| |
|
|||||||||| |||||| ||||||||||| |
|
|
| T |
20241314 |
tgaagttaccgtctttggagattagagtttca |
20241283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 20006889 - 20006991
Alignment:
| Q |
9 |
tcctaacacatccttcggtccaattttgtttattccattcctctttgttccttggctcaaaccctttcaaacagctacatattggtgagctttgtgaatt |
108 |
Q |
| |
|
||||||||||||| | |||||||||||| ||||||| || | ||||| ||||| |||||||||| |||||| ||||| ||||| || | || |||||| |
|
|
| T |
20006889 |
tcctaacacatccattagtccaattttgtctattccactcttgattgtttcttggttcaaacccttccaaacacctacaaattggcgacccttttgaatt |
20006988 |
T |
|
| Q |
109 |
aca |
111 |
Q |
| |
|
||| |
|
|
| T |
20006989 |
aca |
20006991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 806 - 891
Target Start/End: Original strand, 20007671 - 20007756
Alignment:
| Q |
806 |
caccaaattccgacatagcgattcgtagaattttcaggactaaaaaagcctaaggtgaagttaccactcttggagcttagagtttc |
891 |
Q |
| |
|
||||||||||| ||||||||||| || ||||||| ||| | ||||| ||||||||||| || ||||| || ||||||| |||||| |
|
|
| T |
20007671 |
caccaaattcctacatagcgatttgtggaattttgaggggtgaaaaatcctaaggtgaaatttccactatttgagcttaaagtttc |
20007756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 20301919 - 20301846
Alignment:
| Q |
464 |
gatggatcataaggtattttccatgatgtttgttttactttctcacctgttattttgttgctagtaagtttcat |
537 |
Q |
| |
|
||||||||| |||| |||||||||||||| ||||| ||| ||||||||| |||||||| ||| ||||||||| |
|
|
| T |
20301919 |
gatggatcagaagggcttttccatgatgttagttttgatttttcacctgttcttttgttgatagaaagtttcat |
20301846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 20230186 - 20230078
Alignment:
| Q |
39 |
tattccattcctctttgttccttggctcaaaccctttcaaacagctacatattggtgagctttgtgaattacagcttgcaaaatgtccacatacaccata |
138 |
Q |
| |
|
|||||||||||| | ||||| || |||||||||||||||||||| || ||||| | ||| |||||||||||||| ||| ||||||| |||||| |
|
|
| T |
20230186 |
tattccattcctgtatgttcaccggatcaaaccctttcaaacagctgcaaattggcgtgctcaatgaattacagcttgtaaatgccccacatagaccata |
20230087 |
T |
|
| Q |
139 |
aacatcaca |
147 |
Q |
| |
|
||||||||| |
|
|
| T |
20230086 |
aacatcaca |
20230078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 20064059 - 20064140
Alignment:
| Q |
39 |
tattccattcctctttgttccttggctcaaaccctttcaaacagctacatattggtgagctttgtgaattacagcttgcaaa |
120 |
Q |
| |
|
|||||||||||| | || |||| || ||||| |||||||||||||| |||||||||| | | |||| ||||||||||||| |
|
|
| T |
20064059 |
tattccattcctgtatgctcctaggttcaaatcctttcaaacagctgcatattggtgtgttcaatgaactacagcttgcaaa |
20064140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 480 - 537
Target Start/End: Original strand, 20064503 - 20064560
Alignment:
| Q |
480 |
ttttccatgatgtttgttttactttctcacctgttattttgttgctagtaagtttcat |
537 |
Q |
| |
|
||||||||||| || ||||| ||||||||||||| |||||||| ||| ||||||||| |
|
|
| T |
20064503 |
ttttccatgatcttagttttgatttctcacctgttcttttgttgatagaaagtttcat |
20064560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 57; Significance: 3e-23; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 778 - 930
Target Start/End: Original strand, 40826106 - 40826258
Alignment:
| Q |
778 |
cacccataggattgtgaattgaggctgccaccaaattccgacatagcgattcgtagaattttcaggactaaaaaagcctaaggtgaagttaccactcttg |
877 |
Q |
| |
|
|||||||| |||||| | |||| || |||||||||||| || |||||||| |||||||| | ||| ||||| || || ||||||||||||||| ||| |
|
|
| T |
40826106 |
cacccatatgattgtagactgagacttccaccaaattccaacgtagcgatttgtagaattcttagggctaaagaatcccaaggtgaagttaccatctttg |
40826205 |
T |
|
| Q |
878 |
gagcttagagtttcagggtccttgataaagtgagttgatgtaatggtgtctat |
930 |
Q |
| |
|
||| ||||||||||||||||||||| || |||| |||||| ||||||||||| |
|
|
| T |
40826206 |
gagagtagagtttcagggtccttgatgaattgagatgatgtgatggtgtctat |
40826258 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 538
Target Start/End: Original strand, 40825780 - 40825866
Alignment:
| Q |
452 |
aagcttccaatggatggatcataaggtattttccatgatgtttgttttactttctcacctgttattttgttgctagtaagtttcatg |
538 |
Q |
| |
|
|||||||||| |||||||| |||| ||||||||||||| ||| |||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
40825780 |
aagcttccaacagatggatctgaagggtttttccatgatgtgagttgtactttctcacctgttcttttgttgcttgtaagtttcatg |
40825866 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 40820683 - 40820804
Alignment:
| Q |
26 |
gtccaattttgtttattccattcctctttgttccttggctcaaaccctttcaaacagctacatattggtgagctttgtgaattacagcttgcaaaatgtc |
125 |
Q |
| |
|
|||||||| ||| || ||||||| ||| |||| || || |||| ||| | ||||||||||||||||| ||||| | || ||||||||||||| | |
|
|
| T |
40820683 |
gtccaattatgtatactccattcttctatgtttctgggtacaaatcctctaaaacagctacatattggcgagctcaataaactacagcttgcaaatgctg |
40820782 |
T |
|
| Q |
126 |
cacatacaccataaacatcaca |
147 |
Q |
| |
|
|||||| ||||||||||||||| |
|
|
| T |
40820783 |
cacatataccataaacatcaca |
40820804 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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