View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2912_low_8 (Length: 362)
Name: NF2912_low_8
Description: NF2912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2912_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 14 - 361
Target Start/End: Complemental strand, 31098124 - 31097778
Alignment:
| Q |
14 |
acataacatgagaaggtgatgtgttcacatactgagattcaattgtgactcataaagatcgagcaatatcatatgaggcaaatgatagacttcctgcttc |
113 |
Q |
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| T |
31098124 |
acataacatgagaaggtgatgtgttcacataccgagattcaattgtgaa-cacaaagatcgagcaatatcatatgaggcaaatgatagacttcctgcttc |
31098026 |
T |
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| Q |
114 |
tgttatgtcatggacgaaagagagaaattaatgactagttaatcaatgctgaatcactcgatgtattcaaggttaagggagatgccatctcaaacaattg |
213 |
Q |
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| T |
31098025 |
tgttatgtcatggacgaaagagagaaattaatgaccagttaatcaatgctgaatcacttgatgtattcaaggttaagggagatgccatctcaaacaattg |
31097926 |
T |
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| Q |
214 |
tggacgattgagatggtatggttcgaacaatatggcccattatttggatcgcagagaaaaaagtaggtgattggtgtttccaagcacagtaattgctaca |
313 |
Q |
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| T |
31097925 |
tggacgattgagatagtatggttccaacaatatggcccattatttggatcgcagagaaaaaagtaggtgattggtgtttccaagcacagtaattgctaca |
31097826 |
T |
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| Q |
314 |
agatagtttaaaggtaatggaagcattgagaatgcgagacggattggt |
361 |
Q |
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| T |
31097825 |
agatagtttaaaggtaatggaagcattgagaatgcgagacggattggt |
31097778 |
T |
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