View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2918-Insertion-1 (Length: 733)

Name: NF2918-Insertion-1
Description: NF2918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2918-Insertion-1
NF2918-Insertion-1
[»] chr8 (42 HSPs)
chr8 (8-733)||(1423667-1424384)
chr8 (87-230)||(1977210-1977353)
chr8 (94-250)||(24055942-24056098)
chr8 (93-226)||(8903858-8903991)
chr8 (87-230)||(16983394-16983537)
chr8 (129-227)||(8914813-8914911)
chr8 (132-230)||(17499270-17499368)
chr8 (129-223)||(35797437-35797531)
chr8 (87-230)||(28413906-28414049)
chr8 (134-222)||(9952802-9952890)
chr8 (92-224)||(32072102-32072234)
chr8 (87-230)||(34861229-34861365)
chr8 (87-230)||(43506538-43506678)
chr8 (177-250)||(6098794-6098867)
chr8 (87-228)||(35151768-35151909)
chr8 (87-230)||(5979880-5980022)
chr8 (135-220)||(17741574-17741659)
chr8 (448-559)||(10711976-10712088)
chr8 (129-221)||(23685173-23685265)
chr8 (129-225)||(45246476-45246572)
chr8 (129-224)||(31301157-31301251)
chr8 (92-220)||(11962729-11962856)
chr8 (147-250)||(36804856-36804959)
chr8 (96-230)||(41727439-41727573)
chr8 (177-230)||(7493379-7493432)
chr8 (129-220)||(4674952-4675039)
chr8 (92-230)||(6387568-6387705)
chr8 (155-230)||(14236406-14236481)
chr8 (134-220)||(4319780-4319866)
chr8 (142-212)||(9192056-9192126)
chr8 (129-195)||(35689522-35689588)
chr8 (132-197)||(1961327-1961392)
chr8 (201-250)||(5095777-5095826)
chr8 (134-230)||(13407360-13407457)
chr8 (148-217)||(34952504-34952573)
chr8 (92-196)||(43026298-43026400)
chr8 (132-220)||(9193427-9193515)
chr8 (448-508)||(44420639-44420699)
chr8 (129-196)||(1205869-1205936)
chr8 (144-230)||(25915086-25915175)
chr8 (153-220)||(35819198-35819265)
chr8 (459-508)||(16985659-16985708)
[»] chr3 (54 HSPs)
chr3 (87-230)||(41451932-41452075)
chr3 (87-230)||(24734705-24734848)
chr3 (87-230)||(28529253-28529394)
chr3 (87-230)||(20493482-20493625)
chr3 (87-230)||(37776740-37776883)
chr3 (87-230)||(46450067-46450209)
chr3 (87-230)||(46160949-46161090)
chr3 (131-230)||(29588770-29588869)
chr3 (129-230)||(18427187-18427288)
chr3 (87-250)||(48351436-48351599)
chr3 (129-243)||(38414689-38414803)
chr3 (129-230)||(20791338-20791439)
chr3 (147-250)||(2419481-2419584)
chr3 (96-238)||(8825008-8825150)
chr3 (87-230)||(5452099-5452240)
chr3 (129-229)||(22604602-22604702)
chr3 (93-230)||(55452052-55452187)
chr3 (135-220)||(19345047-19345132)
chr3 (94-230)||(50156697-50156831)
chr3 (87-223)||(29755500-29755636)
chr3 (146-230)||(52123993-52124077)
chr3 (129-230)||(14236061-14236162)
chr3 (448-521)||(50056893-50056966)
chr3 (130-218)||(26310495-26310583)
chr3 (151-238)||(10948589-10948676)
chr3 (92-230)||(27243050-27243189)
chr3 (168-230)||(24429062-24429124)
chr3 (448-536)||(28095952-28096039)
chr3 (85-195)||(30624631-30624739)
chr3 (185-236)||(38138613-38138664)
chr3 (92-230)||(41387568-41387704)
chr3 (146-220)||(49072064-49072138)
chr3 (100-238)||(138778-138914)
chr3 (129-204)||(7419241-7419316)
chr3 (135-230)||(15790407-15790501)
chr3 (176-219)||(22856282-22856325)
chr3 (132-230)||(44844026-44844125)
chr3 (130-220)||(50661568-50661659)
chr3 (156-230)||(752461-752535)
chr3 (177-227)||(29388634-29388684)
chr3 (151-225)||(39186028-39186102)
chr3 (176-230)||(43016502-43016556)
chr3 (514-560)||(50057279-50057325)
chr3 (92-224)||(13809087-13809219)
chr3 (98-216)||(40702173-40702289)
chr3 (129-216)||(41707490-41707577)
chr3 (129-196)||(43657067-43657134)
chr3 (514-593)||(50057409-50057488)
chr3 (448-495)||(50061382-50061429)
chr3 (188-230)||(742057-742099)
chr3 (93-250)||(40715879-40716036)
chr3 (175-220)||(41607499-41607544)
chr3 (129-214)||(42340873-42340958)
chr3 (129-170)||(46237143-46237184)
[»] chr6 (24 HSPs)
chr6 (92-230)||(34905341-34905479)
chr6 (135-227)||(16852013-16852105)
chr6 (97-237)||(10133188-10133328)
chr6 (87-230)||(445818-445961)
chr6 (129-228)||(5106340-5106439)
chr6 (95-230)||(31116161-31116296)
chr6 (129-230)||(21987334-21987435)
chr6 (97-230)||(1392640-1392770)
chr6 (135-220)||(32122843-32122928)
chr6 (129-250)||(32598965-32599086)
chr6 (134-250)||(32112734-32112850)
chr6 (134-221)||(12780805-12780892)
chr6 (147-224)||(12784982-12785059)
chr6 (129-230)||(2675937-2676038)
chr6 (176-230)||(16187469-16187523)
chr6 (176-230)||(16187687-16187741)
chr6 (92-220)||(35128769-35128898)
chr6 (129-230)||(19090251-19090353)
chr6 (181-238)||(17144700-17144757)
chr6 (197-230)||(34882267-34882300)
chr6 (87-230)||(12753797-12753940)
chr6 (175-230)||(8441886-8441941)
chr6 (175-230)||(8450690-8450745)
chr6 (87-120)||(12753758-12753791)
[»] chr4 (49 HSPs)
chr4 (130-250)||(39471200-39471320)
chr4 (93-238)||(43771132-43771277)
chr4 (90-230)||(20454543-20454681)
chr4 (96-228)||(10169684-10169814)
chr4 (92-230)||(8108961-8109099)
chr4 (87-229)||(50164395-50164537)
chr4 (129-230)||(722199-722300)
chr4 (129-230)||(47009231-47009332)
chr4 (87-230)||(33653526-33653669)
chr4 (87-223)||(49077249-49077385)
chr4 (129-230)||(754617-754718)
chr4 (87-225)||(20225383-20225519)
chr4 (134-228)||(24834625-24834719)
chr4 (87-230)||(26361345-26361480)
chr4 (129-250)||(24938432-24938553)
chr4 (129-228)||(50481584-50481683)
chr4 (129-230)||(49242212-49242313)
chr4 (130-236)||(22542424-22542530)
chr4 (97-250)||(19937189-19937341)
chr4 (129-230)||(34129437-34129538)
chr4 (129-250)||(52671872-52671993)
chr4 (129-250)||(37451030-37451149)
chr4 (129-227)||(48339380-48339478)
chr4 (129-222)||(38636379-38636472)
chr4 (135-226)||(31250924-31251015)
chr4 (134-220)||(38537560-38537649)
chr4 (137-226)||(45310989-45311078)
chr4 (448-508)||(11393149-11393209)
chr4 (448-508)||(11402876-11402936)
chr4 (87-230)||(40991626-40991769)
chr4 (96-211)||(46242000-46242113)
chr4 (129-220)||(5044587-5044678)
chr4 (129-220)||(49682838-49682929)
chr4 (93-208)||(50571870-50571985)
chr4 (184-230)||(11895134-11895180)
chr4 (129-250)||(13069983-13070104)
chr4 (129-250)||(25719129-25719251)
chr4 (129-230)||(51206085-51206187)
chr4 (145-222)||(13520007-13520084)
chr4 (128-220)||(18421878-18421968)
chr4 (129-170)||(21776942-21776983)
chr4 (96-217)||(33995985-33996106)
chr4 (87-196)||(47237812-47237921)
chr4 (129-200)||(30866999-30867070)
chr4 (133-228)||(50652375-50652470)
chr4 (146-228)||(46536301-46536383)
chr4 (178-228)||(52279298-52279348)
chr4 (178-219)||(46287532-46287573)
chr4 (129-170)||(48608122-48608163)
[»] chr1 (50 HSPs)
chr1 (129-269)||(32211786-32211922)
chr1 (87-230)||(41958085-41958226)
chr1 (87-230)||(26980299-26980442)
chr1 (135-245)||(33193098-33193208)
chr1 (129-230)||(30678948-30679049)
chr1 (129-230)||(41948183-41948284)
chr1 (129-230)||(19101638-19101739)
chr1 (87-230)||(2225226-2225367)
chr1 (87-222)||(6325858-6325990)
chr1 (87-227)||(11987626-11987766)
chr1 (129-222)||(1093118-1093211)
chr1 (135-228)||(39499442-39499535)
chr1 (87-268)||(6133628-6133804)
chr1 (138-230)||(8899065-8899157)
chr1 (129-221)||(22540410-22540502)
chr1 (146-227)||(10659808-10659889)
chr1 (93-230)||(28218085-28218222)
chr1 (87-231)||(3872670-3872813)
chr1 (129-221)||(15523252-15523344)
chr1 (129-221)||(15531246-15531338)
chr1 (182-238)||(37552978-37553034)
chr1 (87-250)||(8741240-8741405)
chr1 (129-218)||(49730906-49730995)
chr1 (98-250)||(51732290-51732440)
chr1 (132-238)||(31866361-31866466)
chr1 (136-230)||(33114020-33114114)
chr1 (193-245)||(16948551-16948603)
chr1 (134-230)||(29673522-29673618)
chr1 (129-225)||(37525571-37525667)
chr1 (87-228)||(931374-931515)
chr1 (129-226)||(15468262-15468359)
chr1 (132-213)||(46335142-46335223)
chr1 (448-495)||(1286185-1286232)
chr1 (143-222)||(45179291-45179370)
chr1 (129-230)||(13114706-13114808)
chr1 (129-230)||(41918037-41918139)
chr1 (129-230)||(15928597-15928698)
chr1 (134-250)||(15906458-15906573)
chr1 (129-220)||(29418523-29418615)
chr1 (92-224)||(35336871-35336997)
chr1 (135-230)||(39974237-39974326)
chr1 (175-230)||(12767365-12767420)
chr1 (179-226)||(15906632-15906679)
chr1 (177-220)||(44272008-44272051)
chr1 (129-220)||(50539166-50539257)
chr1 (129-230)||(11135781-11135883)
chr1 (129-170)||(15660935-15660976)
chr1 (155-228)||(27570293-27570366)
chr1 (201-250)||(33113990-33114039)
chr1 (177-230)||(47644334-47644387)
[»] chr2 (40 HSPs)
chr2 (129-250)||(44274276-44274397)
chr2 (129-228)||(9470123-9470222)
chr2 (87-230)||(26767798-26767941)
chr2 (92-250)||(6980137-6980295)
chr2 (87-230)||(12989191-12989334)
chr2 (87-250)||(45554567-45554722)
chr2 (134-250)||(25238294-25238411)
chr2 (93-242)||(34142164-34142313)
chr2 (155-226)||(7919311-7919382)
chr2 (129-228)||(19639135-19639234)
chr2 (129-228)||(19837728-19837827)
chr2 (97-230)||(35316438-35316569)
chr2 (97-197)||(2476546-2476644)
chr2 (129-230)||(11539465-11539569)
chr2 (134-238)||(12098895-12099000)
chr2 (146-226)||(38464222-38464302)
chr2 (151-230)||(10981582-10981661)
chr2 (87-221)||(18511255-18511389)
chr2 (166-238)||(472192-472264)
chr2 (92-250)||(16719447-16719605)
chr2 (134-236)||(30849284-30849386)
chr2 (130-220)||(32701513-32701603)
chr2 (134-220)||(37652292-37652378)
chr2 (96-220)||(17188076-17188198)
chr2 (87-230)||(32856172-32856319)
chr2 (97-230)||(36471875-36472008)
chr2 (182-230)||(4552877-4552925)
chr2 (453-556)||(25476329-25476432)
chr2 (180-242)||(14489564-14489626)
chr2 (156-222)||(15884498-15884564)
chr2 (448-521)||(17508848-17508921)
chr2 (134-230)||(43414402-43414498)
chr2 (129-230)||(28898073-28898175)
chr2 (23-64)||(2816572-2816613)
chr2 (129-170)||(41805873-41805914)
chr2 (92-230)||(24895303-24895440)
chr2 (200-250)||(25730456-25730506)
chr2 (182-220)||(30718374-30718412)
chr2 (129-226)||(42182931-42183029)
chr2 (448-508)||(38500219-38500282)
[»] chr7 (44 HSPs)
chr7 (85-230)||(46517291-46517434)
chr7 (142-230)||(27888337-27888425)
chr7 (87-227)||(31502504-31502644)
chr7 (87-230)||(32205079-32205219)
chr7 (87-230)||(22189939-22190082)
chr7 (97-238)||(7459353-7459494)
chr7 (134-268)||(25686838-25686968)
chr7 (87-235)||(33008104-33008252)
chr7 (129-228)||(7775042-7775140)
chr7 (92-230)||(12263473-12263611)
chr7 (96-230)||(27949282-27949416)
chr7 (146-238)||(6442224-6442316)
chr7 (87-230)||(14795131-14795274)
chr7 (87-230)||(15242123-15242266)
chr7 (132-230)||(32212907-32213004)
chr7 (129-230)||(11692221-11692322)
chr7 (129-230)||(11824113-11824214)
chr7 (87-230)||(48374476-48374617)
chr7 (143-226)||(23564076-23564159)
chr7 (93-230)||(19422871-19423008)
chr7 (92-238)||(39254088-39254234)
chr7 (102-228)||(32178843-32178966)
chr7 (472-557)||(39364335-39364420)
chr7 (129-230)||(44350839-44350940)
chr7 (132-236)||(10933996-10934100)
chr7 (87-198)||(12270988-12271096)
chr7 (96-220)||(25092708-25092832)
chr7 (129-230)||(24539159-24539261)
chr7 (177-222)||(36845567-36845612)
chr7 (129-220)||(19494385-19494477)
chr7 (96-204)||(44510999-44511107)
chr7 (129-230)||(17749736-17749838)
chr7 (188-245)||(1316374-1316431)
chr7 (177-230)||(6580039-6580092)
chr7 (87-188)||(8073367-8073468)
chr7 (145-222)||(9648982-9649059)
chr7 (192-228)||(36845530-36845566)
chr7 (199-238)||(12167319-12167358)
chr7 (132-230)||(17354563-17354662)
chr7 (152-230)||(1688048-1688126)
chr7 (129-230)||(25428515-25428617)
chr7 (188-230)||(31874117-31874159)
chr7 (177-226)||(3855851-3855900)
chr7 (146-230)||(13919839-13919924)
[»] chr5 (34 HSPs)
chr5 (87-230)||(10142013-10142154)
chr5 (87-230)||(28490759-28490902)
chr5 (136-229)||(39246657-39246750)
chr5 (129-227)||(34368402-34368500)
chr5 (129-230)||(5413774-5413875)
chr5 (129-238)||(25710501-25710610)
chr5 (93-228)||(28090268-28090401)
chr5 (129-228)||(17537141-17537240)
chr5 (129-222)||(41330438-41330531)
chr5 (129-228)||(43405435-43405534)
chr5 (129-227)||(27592492-27592590)
chr5 (128-230)||(37455390-37455491)
chr5 (129-230)||(30325911-30326012)
chr5 (132-222)||(28434863-28434951)
chr5 (130-230)||(41105607-41105707)
chr5 (87-226)||(28611819-28611958)
chr5 (132-238)||(34384720-34384826)
chr5 (446-593)||(1678916-1679066)
chr5 (134-222)||(1923597-1923685)
chr5 (92-228)||(25630812-25630948)
chr5 (177-220)||(31885878-31885921)
chr5 (136-238)||(10666717-10666819)
chr5 (95-228)||(17434888-17435019)
chr5 (130-223)||(28155746-28155837)
chr5 (129-230)||(42224627-42224729)
chr5 (179-230)||(28223813-28223864)
chr5 (177-220)||(36337937-36337980)
chr5 (146-224)||(10950145-10950223)
chr5 (146-220)||(25919270-25919344)
chr5 (177-230)||(14553602-14553655)
chr5 (131-192)||(43541895-43541956)
chr5 (131-230)||(24915099-24915199)
chr5 (134-228)||(2525621-2525715)
chr5 (166-220)||(4427321-4427375)
[»] scaffold0018 (1 HSPs)
scaffold0018 (133-238)||(27858-27963)
[»] scaffold0204 (1 HSPs)
scaffold0204 (129-227)||(26902-27000)
[»] scaffold0543 (1 HSPs)
scaffold0543 (129-224)||(9706-9801)
[»] scaffold0492 (1 HSPs)
scaffold0492 (129-224)||(11252-11347)
[»] scaffold0245 (1 HSPs)
scaffold0245 (448-495)||(12452-12499)
[»] scaffold0118 (1 HSPs)
scaffold0118 (448-507)||(18936-18995)


Alignment Details
Target: chr8 (Bit Score: 565; Significance: 0; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 565; E-Value: 0
Query Start/End: Original strand, 8 - 733
Target Start/End: Original strand, 1423667 - 1424384
Alignment:
Q  8 tagaaatcttaaagcattgaatatgcaaaacttggaccaagaaagatcaaagatccaatatatatgtaacatgttccatgaatactagcaacactcactt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1423667 tagaaatcttaaagcattgaatatgcaaaacttggaccaagaaagatcaaagatccaatatatatgtgacatgttccatgaatactagcaacactcactt 1423766  T
Q  108 ttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag---atccacaa 204  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | ||||||    
T  1423767 ttcaacactctttagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagtagacccacaa 1423866  T
Q  205 tgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaattaagagagtgttgctaattaattagggacaataaatactcttataaagctttg 304  Q
    |||         |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1423867 tga---------ataagagaatgaattttagagaaaatgtttaaaattaagagagtgttgctaattaattagggacaataagtactcttataaagctttg 1423957  T
Q  305 ccgatttcagttcaatcctatgacaagaataacatactcccctgccagtagcaaaatgattatagcta-ttttttatctccgtatgaatattttccccct 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  1423958 ccgatttcagttcaatcctatgacaagaataacatactcccctgctagtagcaaaatgattatagctatttttttatctccgtatgaatatttttcccct 1424057  T
Q  404 gctagtagcaaaatgaatatttcttggggagctggatccctatatatataaacacattagtagttgtgcattttttatctctgaaatataatgtttagtt 503  Q
    ||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  1424058 gctagtagcaaaatgaatatttcttggagagctggatccc--tatatataaacacattagtagttgtacattttttgtctctgaaatataatgtttagtt 1424155  T
Q  504 ttcacgtggcatcagagctcctgatcttggggggtcttgtttccgcataaaccctagttgcagtccttgcaattacttttgcttttttcgtctttattgt 603  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||    
T  1424156 ttcacgtggcatcagagctcccgatcttgggaggtcttgtttccgcataaaccctagttgcagt-ctttcggttacttttgcttttttcgtctttattgt 1424254  T
Q  604 gagtttttgccttcatcgcggactctttgagatcctaaaagccctgttcattagaaaacactattcaccatgcaaactgtttatcgcaagtactgttcat 703  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1424255 gagtttatgcgttcatcgcggactctttgagatcctaaaagccctgttcattagaaaacactattcaccatgcacactgtttatcgcaagtactgttcat 1424354  T
Q  704 tccgagtgcactttccgtagtacgccactg 733  Q
    | |||||||||||||| |||| ||||||||    
T  1424355 ttcgagtgcactttccatagtgcgccactg 1424384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 1977353 - 1977210
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||| ||||||| |||||||||| ||||||||||  || | |  ||||||| | || ||| |||||||||||||||||||||||||||  | ||||||||    
T  1977353 gaatgctagcaatactcactttttaacactctctctagcact--cactcttctgttggatgaaatcaatgtatgtccaaccactttgtgtgggttcaatt 1977256  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  1977255 ttcaaagtgtagatccacaatgatttaaaccaataaaagagtgagt 1977210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 94 - 250
Target Start/End: Complemental strand, 24056098 - 24055942
Alignment:
Q  94 agcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 191  Q
    |||||||||||||||||||| ||||||  || | |  | ||||||||| |||| |||| ||||||||||| ||||||||||   ||||||||||||||||    
T  24056098 agcaacactcacttttcaacgctctctttagcact--cgctcttttatcagatgaaattaatgtatgtcccaccactttgtgtaagttcaattttcaaag 24056001  T
Q  192 tgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 250  Q
    |||||| ||||||| |||||||||||||||||||||||| ||| ||||| |||| ||||    
T  24056000 tgtagacccacaattatttaaaccaataagagagtgagtgttagagaaagtgttcaaaa 24055942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 8903858 - 8903991
Alignment:
Q  93 tagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaa 190  Q
    |||||||||||| |||||||||||||||  |||| |  ||||  |||||| ||| |||||||||||||||| ||||||||||    ||||||||||||||    
T  8903858 tagcaacactcatttttcaacactctctctagtact--cacttgtttatttgatgaaatcaatgtatgtcccaccactttgtgtcggttcaattttcaaa 8903955  T
Q  191 gtgtagatccacaatgatttaaaccaataagagagt 226  Q
    ||||||| ||||||||||||||||||||||||||||    
T  8903956 gtgtagacccacaatgatttaaaccaataagagagt 8903991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 16983394 - 16983537
Alignment:
Q  87 gaatactagcaacactcacttttcaacactct--ctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||| |||||||||||||||||||||||||||  |||| | |  ||||  |||||| |||||||||| | ||||||| | ||||||||  | ||||||||    
T  16983394 gaatgctagcaacactcacttttcaacactctatctagcact--cactgatttattggataaaatcattttatgtcccatcactttgtgggggttcaatt 16983491  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||||||  |||||||||||||||||||||||||||||||    
T  16983492 ttcaaagtgtagactcacaatgatttaaaccaataagagagtgagt 16983537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 8914813 - 8914911
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 227  Q
    |||||||| ||| ||||||| |||||||||||| ||||||||||  | ||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  8914813 cactctttcattggataaaaccaatgtatgtcccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgatttaaaccaataagagagtg 8914911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 132 - 230
Target Start/End: Complemental strand, 17499368 - 17499270
Alignment:
Q  132 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||| ||| |||||||| ||||||| |||| |||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17499368 tcttttattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 17499270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 35797437 - 35797531
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagag 223  Q
    |||||||||||| |||||||||||||||||| | ||||||||||  |||||||||||| |||||||| ||||||||||||||||| |||||||||    
T  35797437 cactcttttattggataaaatcaatgtatgttccaccactttgtgcgagttcaatttttaaagtgtaaatccacaatgatttaaatcaataagag 35797531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 28414049 - 28413906
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| ||| |||||||||||||||||||||||||        |||| ||||||| ||| |||||||||||||||| ||||||||||  ||||||||||||    
T  28414049 gaatgctaacaacactcacttttcaacactctctctagcgctcacttttttattcgatgaaatcaatgtatgtcccaccactttgtgtgagttcaatttt 28413950  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||| |||| ||| |||||||||||||||||| ||| |||||    
T  28413949 caaagtatagacccataatgatttaaaccaataaaagaatgagt 28413906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 9952890 - 9952802
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 222  Q
    ||||||| ||| ||||||||| |||||| ||||||||||  ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  9952890 ttttattggatgaaatcaatgcatgtcccaccactttgtgtgagttcaattttcaaagtgtaaacccacaatgatttaaaccaataaga 9952802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 92 - 224
Target Start/End: Original strand, 32072102 - 32072234
Alignment:
Q  92 ctagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaa 189  Q
    ||||||||| |||||||||||||||||||  || | |  |||||||||||| ||| |||| ||||||||||| ||||||||||  | |||||||||| ||    
T  32072102 ctagcaacattcacttttcaacactctctctagcact--cactcttttattggatgaaatgaatgtatgtcccaccactttgtgtgggttcaatttttaa 32072199  T
Q  190 agtgtagatccacaatgatttaaaccaataagaga 224  Q
    |||||||| ||||||| ||||||| ||||||||||    
T  32072200 agtgtagacccacaattatttaaatcaataagaga 32072234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 34861365 - 34861229
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| |||||| | |||||||||||||||||||||| | |  |||||||||||| ||| |||||||||||||||| ||||||||||    ||||||||||    
T  34861365 gaatgctagcacctctcacttttcaacactctctagcact--cactcttttattggatgaaatcaatgtatgtcccaccactttgtgtaggttcaatttt 34861268  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||      ||||||| ||||||||||||||||||||||||    
T  34861267 caaagt-----cccacaataatttaaaccaataagagagtgagt 34861229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 43506538 - 43506678
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| |||||||||||||||||| |||||||||||  | |  |||| ||||||| |||| ||||||||||||| | ||||||||||  | |||| | |||    
T  43506538 gaatgctagcaacactcacttttgaacactctctaacact--cact-ttttattggatataatcaatgtatgttccaccactttgtgtgggttctacttt 43506634  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||| ||||||| |||||||||||||| |||||||||||||||||    
T  43506635 caatgtgtagacccacaatgatttaagccaataagagagtgagt 43506678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 6098867 - 6098794
Alignment:
Q  177 gttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 250  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| ||| |||||||||||    
T  6098867 gttcaattttcaaagtgtagatccacaataatttaaatcaataagagagtgagtattagagagaatgtttaaaa 6098794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 87 - 228
Target Start/End: Complemental strand, 35151909 - 35151768
Alignment:
Q  87 gaatactagcaacactcacttttcaacactc--tctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    ||||||||||||||||||||||| |||||||  | ||| ||||  ||||||||||| ||| |||||||||||||||| |||| |||||  |  |||||||    
T  35151909 gaatactagcaacactcactttttaacactctttttagcattt--actcttttattggatgaaatcaatgtatgtcccaccattttgtggggattcaatt 35151812  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    || |||||||||| ||||||| ||| |||| ||||||| |||||    
T  35151811 tttaaagtgtagacccacaataattcaaactaataagaaagtga 35151768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 5979880 - 5980022
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| ||||||||||| |||||||||||||||||    |  |||||||| |||| ||| | |||||||||||||| ||||||||||  | ||||||||||    
T  5979880 gaatgctagcaacacttacttttcaacactctctctagtagacactcttctattggatgagatcaatgtatgtcccaccactttgtgtgggttcaatttt 5979979  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||  |  ||||||| ||| |||||||||||||||||||    
T  5979980 caaagtgtgaactcacaatggttt-aaccaataagagagtgagt 5980022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 135 - 220
Target Start/End: Complemental strand, 17741659 - 17741574
Alignment:
Q  135 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    |||||| ||| |||||||||||||||| |||| ||||| |||||||||||||||||||||||| | | |||| |||||||||||||    
T  17741659 tttattggatgaaatcaatgtatgtcccaccattttgtgagagttcaattttcaaagtgtagacctataatggtttaaaccaataa 17741574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 448 - 559
Target Start/End: Original strand, 10711976 - 10712088
Alignment:
Q  448 tatataaacacattagtagttgtgcatt-ttttatctctgaaatataatgtttagttttcacgtggcatcagagctcctgatcttggggggtcttgtttc 546  Q
    |||||||| |||||||| | | | |||| |||||||||||| ||||||| || ||||||||| |||||||||| |||   ||||||||| ||||||||||    
T  10711976 tatataaatacattagtggatatacattattttatctctgacatataatattcagttttcacatggcatcagaactctcaatcttggggagtcttgtttc 10712075  T
Q  547 cgcataaacccta 559  Q
    |||||||||||||    
T  10712076 cgcataaacccta 10712088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 23685173 - 23685265
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataag 221  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| |||| |||||||||||| | ||||||||||||||||||||    
T  23685173 cactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagattcgcaatgatttaaaccaataag 23685265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 45246476 - 45246572
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagag 225  Q
    |||| ||||||| |||||||||||||||||||  |||||||| |  |||||| |||| |||||||||||||  |||||||||||| |||||||||||    
T  45246476 cactattttattggataaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaatcaataagagag 45246572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 31301157 - 31301251
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagaga 224  Q
    |||||||||||| ||| |||||||||||||| | ||||||||||  |||||| |||||||| |||||||| || ||| ||||||||||||||||||    
T  31301157 cactcttttattggatgaaatcaatgtatgttccaccactttgtgtgagttctattttcaatgtgtagat-cataataatttaaaccaataagaga 31301251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 11962856 - 11962729
Alignment:
Q  92 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 191  Q
    ||||| |||||||||||||||||| ||||   ||   ||||||||||||  |||||||||| |||| ||| |||| ||| |    |||||||||||||||    
T  11962856 ctagcgacactcacttttcaacacgctctttaatactcactcttttattgaataaaatcaaagtatatcccaccattttatgtaggttcaattttcaaag 11962757  T
Q  192 tgtagatccacaatgatttaaaccaataa 220  Q
    |||||||||| ||||||||||||||||||    
T  11962756 tgtagatcca-aatgatttaaaccaataa 11962729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 250
Target Start/End: Complemental strand, 36804959 - 36804856
Alignment:
Q  147 aatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgttt 246  Q
    ||||||||||||||| |||| |||||  | |||||||||||||| | || ||||||||| ||||||| |||||||||||| ||| ||| ||| ||||||     
T  36804959 aatcaatgtatgtcccaccattttgtgtgggttcaattttcaaaatatacatccacaataatttaaatcaataagagagtaagtattagagagaatgttg 36804860  T
Q  247 aaaa 250  Q
    ||||    
T  36804859 aaaa 36804856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 41727439 - 41727573
Alignment:
Q  96 caacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtg 193  Q
    |||||||||||||| ||||||||||  || | |  ||||||||| ||||||||||||||||||||||| ||| ||||||    ||||  |||| || |||    
T  41727439 caacactcacttttgaacactctctttagcaat--cactcttttgttagataaaatcaatgtatgtcccaccgctttgtgtaggttctgtttttaatgtg 41727536  T
Q  194 tagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||  || ||||||||||||||| ||||||||||||    
T  41727537 tagactcataatgatttaaaccaacaagagagtgagt 41727573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 7493432 - 7493379
Alignment:
Q  177 gttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  7493432 gttctattttcaaagtgtagactcacaatgatttaaaccaataagagagtgagt 7493379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 4674952 - 4675039
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    |||||||||||||||| ||||||||||    || | ||||||||  ||||| ||||||||||||||||   |||||||||||||||||||||    
T  4674952 cactcttttattagatgaaatcaatgt----cctatcactttgtgtgagtttaattttcaaagtgtagtcacacaatgatttaaaccaataa 4675039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 230
Target Start/End: Original strand, 6387568 - 6387705
Alignment:
Q  92 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 191  Q
    |||||||||||| |||||  ||||||||||  | |  |||||||||||| |||||||||||||||||||| |||| ||| |  | |||| |||| |||||    
T  6387568 ctagcaacactctcttttggacactctctaacact--cactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaag 6387665  T
Q  192 tgta-gatccacaatgatttaaaccaataagagagtgagt 230  Q
    | || || ||||| || ||||| ||||||||||| |||||    
T  6387666 tatacgacccacattgttttaacccaataagagaatgagt 6387705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 14236406 - 14236481
Alignment:
Q  155 tatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||| ||||||||||   ||||||||||| |||||||||   |||||| ||||||||||| ||||||||||||    
T  14236406 tatgtcccaccactttgtgtaagttcaattttgaaagtgtaggcgcacaataatttaaaccaacaagagagtgagt 14236481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 4319866 - 4319780
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    ||||||||||||||||||||| |||||  | ||||||||  || || ||||||||||||||||| | ||| | ||||||| ||||||    
T  4319866 ttttattagataaaatcaatgcatgtctcatcactttgtgtgaatttaattttcaaagtgtagacctacactaatttaaatcaataa 4319780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 9192056 - 9192126
Alignment:
Q  142 gataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaa 212  Q
    |||||||||||||||| ||| ||||||||||  | |||||||||| ||| ||||||  |||||||||||||    
T  9192056 gataaaatcaatgtatatcccaccactttgtgtgggttcaatttttaaattgtagactcacaatgatttaa 9192126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 35689522 - 35689588
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta 195  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| ||||||||||||||    
T  35689522 cacttttttattggatgaaatcaatgtatgtcccaccactttatgtgagttccattttcaaagtgta 35689588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 1961327 - 1961392
Alignment:
Q  132 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtaga 197  Q
    ||||||||| ||||||||||| ||| |||| |||||||||   | |||||||||||||||||||||    
T  1961327 tcttttattggataaaatcaaggtacgtcccaccactttgcgtgggttcaattttcaaagtgtaga 1961392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 5095826 - 5095777
Alignment:
Q  201 acaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 250  Q
    |||||||||||||||||||||||||||||| ||| |||  ||||||||||    
T  5095826 acaatgatttaaaccaataagagagtgagtattagagaggatgtttaaaa 5095777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 13407457 - 13407360
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta-gatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||| |||||||||||||||||||| |||| |||    | |||| |||||||||||||| || ||||| |||||||| ||||| ||||| |||||    
T  13407457 ttttattggataaaatcaatgtatgtcccaccattttaagtgggttctattttcaaagtgtatgacccacattgatttaacccaatgagagaatgagt 13407360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 34952504 - 34952573
Alignment:
Q  148 atcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaa 217  Q
    |||||||||||||| |||| |||||  || ||||||||||||  |||||| || ||||||||||||||||    
T  34952504 atcaatgtatgtcccaccattttgtgggatttcaattttcaatatgtagacccgcaatgatttaaaccaa 34952573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 43026298 - 43026400
Alignment:
Q  92 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 191  Q
    ||||||||| || ||||| |||||||||||| | |  |||| ||||||||| ||||||||||||||||||  ||||||| |  | |||| |||| |||||    
T  43026298 ctagcaacattctcttttaaacactctctagcact--cacttttttattaggtaaaatcaatgtatgtcctgccactttatgtgggttccatttccaaag 43026395  T
Q  192 tgtag 196  Q
    |||||    
T  43026396 tgtag 43026400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 9193427 - 9193515
Alignment:
Q  132 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    ||||||||| ||| |||| | ||||||||  || |||||||   |||||||||||||||||||||| | ||||| ||| ||||||||||    
T  9193427 tcttttatttgatgaaattagtgtatgtctcactactttgtgtaagttcaattttcaaagtgtagacctacaataattaaaaccaataa 9193515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 448 - 508
Target Start/End: Original strand, 44420639 - 44420699
Alignment:
Q  448 tatataaacacattagtagttgtgcattttttatctctgaaatataatgtttagttttcac 508  Q
    ||||||||||||||||| |||||  ||  ||||||||||||||||||| || |||||||||    
T  44420639 tatataaacacattagtggttgtatatcatttatctctgaaatataatattcagttttcac 44420699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 1205869 - 1205936
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 196  Q
    |||||||||||||| |||||| ||||||||||  |||||||| || | |||| |||| ||||||||||    
T  1205869 cactcttttattaggtaaaattaatgtatgtctcaccactttatatgggttctatttccaaagtgtag 1205936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 25915086 - 25915175
Alignment:
Q  144 taaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtaga---tccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||||||||||| || ||||| |  | |||| ||||||||||||||||   |||||| |||||| | ||||||| |||||||||    
T  25915086 taaaatcaatgtatgtcctactactttatttgggttccattttcaaagtgtagaggttccacattgatttcacccaataaaagagtgagt 25915175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 35819198 - 35819265
Alignment:
Q  153 tgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    ||||||||| |||| |||||  | | |||||||||||||| |||| |||||||||||||||| |||||    
T  35819198 tgtatgtcccaccattttgtgtgggctcaattttcaaagtatagacccacaatgatttaaactaataa 35819265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 508
Target Start/End: Complemental strand, 16985708 - 16985659
Alignment:
Q  459 attagtagttgtgcattttttatctctgaaatataatgtttagttttcac 508  Q
    |||||| ||||| |||| ||||||||||||||||||| || |||||||||    
T  16985708 attagtggttgtacattatttatctctgaaatataatattcagttttcac 16985659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 2e-39; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 41452075 - 41451932
Alignment:
Q  87 gaatactagcaacactcacttttcaacac--tctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||||||||||||||||||||||||||||  ||||||||| |  |||||||||||| ||| ||||||| |||||||| ||||||||||  | ||||||||    
T  41452075 gaatactagcaacactcacttttcaacacaatctctagtact--cactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaatt 41451978  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  41451977 ttcaaagagtagacccacaatgatttaaaccaataagagagtgagt 41451932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 24734705 - 24734848
Alignment:
Q  87 gaatactagcaacactcacttttcaacac--tctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||||||||||||||||||||||||||||  ||||||||| |  |||||||||||| ||| ||||||| |||||||| ||||||||||  | ||||||||    
T  24734705 gaatactagcaacactcacttttcaacacaatctctagtact--cactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaatt 24734802  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||||    
T  24734803 ttcaaagagtaggcccacaatgatttaaaccaataagagagtgagt 24734848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 28529253 - 28529394
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||| |||||||||||||||||||||||||||||  || | |  |||||||||||| ||| |||||||||||||||| |||||| |||  | ||||||||    
T  28529253 gaatgctagcaacactcacttttcaacactctctctagcact--cactcttttattggatgaaatcaatgtatgtcccaccactgtgt--gggttcaatt 28529348  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  28529349 ttcaaagtgtagacccacaatgatttaaaccaataagagagtgagt 28529394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 20493625 - 20493482
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| |||||||||||||||||||||||||||||   |    ||||| |||||| ||| |||||||||||||||| ||||||||||  | ||||||| ||    
T  20493625 gaatgctagcaacactcacttttcaacactctctctaacactcactcatttattggatgaaatcaatgtatgtcctaccactttgtgggggttcaatatt 20493526  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  20493525 caaagtgtagacccacaatgatttaaaccaataagagagtgagt 20493482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 37776883 - 37776740
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||| ||||||||||||||||||||||||| |||  || | |  |||||||||||||||| |||||||||||||||| ||||||||||  | ||||||||    
T  37776883 gaatgctagcaacactcacttttcaacactttctccagcact--cactcttttattagatgaaatcaatgtatgtcctaccactttgtgtgggttcaatt 37776786  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||||| | |||||||||||||||| |||||||||||||    
T  37776785 ttcaaagtgtagacctacaatgatttaaaccactaagagagtgagt 37776740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 46450067 - 46450209
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccacttt-gtaagagttcaattt 185  Q
    |||| |||||||||||||||||| |||||||||||| | |  ||||||||||||||||  ||||||||||||||| |||||||| ||  | |||| ||||    
T  46450067 gaatgctagcaacactcacttttgaacactctctagcact--cactcttttattagatggaatcaatgtatgtcccaccacttttgtgtgggttctattt 46450164  T
Q  186 tcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
     ||||||||||| ||||||||||||||||||||||||||||||||    
T  46450165 gcaaagtgtagacccacaatgatttaaaccaataagagagtgagt 46450209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 46160949 - 46161090
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| |||||||||||||||||| |||||||||||| | |  |||||||||||| ||| ||||||||  |||||| ||||||||||    |||| ||||     
T  46160949 gaatgctagcaacactcacttttgaacactctctagcact--cactcttttattggatgaaatcaatacatgtccgaccactttgtgttggttctatttc 46161046  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  46161047 caaagtgtagatccataatgatttaaaccaataagagagtgagt 46161090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 29588869 - 29588770
Alignment:
Q  131 ctcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||| ||||||||||||||||||||   |||||| |  ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  29588869 ctcttttattggataaaatcaatgtatgtcctttcactttatgtgagttcaattttcaaagtgtagacccacaatgatttaaatcaataagagagtgagt 29588770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 18427288 - 18427187
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    ||||| |||||| ||| |||||||||||||||| |||| |||||  | |||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  18427288 cactcatttattggatgaaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgtagacccacaatgatttaaaccaataagagagtga 18427189  T
Q  229 gt 230  Q
    ||    
T  18427188 gt 18427187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 48351436 - 48351599
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| ||| ||||||||| |||| ||||||||||   |   ||||||||||||| |||||||||||| ||||||  || |||||||  | ||||||||||    
T  48351436 gaatgctaacaacactcagtttttaacactctctttaagacacactcttttattggataaaatcaatatatgtctcactactttgtgtgggttcaatttt 48351535  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 250  Q
    ||||||||| ||||| ||||||||||| ||||||||||  |||| ||| |||||||||| ||||    
T  48351536 caaagtgtatatccataatgatttaaatcaataagagaaagagtattagagaaaatgttcaaaa 48351599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 38414689 - 38414803
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||| | ||||||||| |||||||||||||| |||| |||||  | ||| |||||| ||||||||||||||| || ||||||||||||||||||||||    
T  38414689 cactctctcattagataagatcaatgtatgtcccaccattttgtgtgggtttaatttttaaagtgtagatccacgataatttaaaccaataagagagtga 38414788  T
Q  229 gttttaaagaaaatg 243  Q
    || ||||||| ||||    
T  38414789 gtgttaaagagaatg 38414803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 20791338 - 20791439
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| |||| |||||||||||||| ||||||||||||||||||||| |||||    
T  20791338 cactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaaccaataagaaagtga 20791437  T
Q  229 gt 230  Q
    ||    
T  20791438 gt 20791439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 147 - 250
Target Start/End: Complemental strand, 2419584 - 2419481
Alignment:
Q  147 aatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgttt 246  Q
    |||||||| |||||| ||||||||| | |||||| |||| ||| ||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||     
T  2419584 aatcaatgcatgtcctaccactttgcatgagttctatttccaatgtgtagacccacaatgatttaaaccaataagaaagtgagtattaaagaaagtgttc 2419485  T
Q  247 aaaa 250  Q
    ||||    
T  2419484 aaaa 2419481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 96 - 238
Target Start/End: Complemental strand, 8825150 - 8825008
Alignment:
Q  96 caacactcacttttcaaca--ctctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtg 193  Q
    ||||||||||||||||||   |||||||||| |  ||| |||||||||||| |||||||| ||||||| |||| ||| |  | ||||||||||||||||     
T  8825150 caacactcacttttcaaccatctctctagtact--cacccttttattagatgaaatcaatatatgtcccaccattttatgcgggttcaattttcaaagtc 8825053  T
Q  194 tagatccacaatgatttaaaccaataagagagtgagttttaaaga 238  Q
    || |  |||||| |||||||||||||||||||||||| |||||||    
T  8825052 tacactcacaataatttaaaccaataagagagtgagtattaaaga 8825008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 5452240 - 5452099
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| |||||||||||||||||||||||||||||   |  | |||||||||||| ||| |||||||||||| ||| ||||||||||  |  |||||||||    
T  5452240 gaatgctagcaacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgtgtggattcaatttt 5452141  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    | |||||||||  | ||| |||||||| ||||||||||| ||||    
T  5452140 ctaagtgtaga--cccaaggatttaaatcaataagagagcgagt 5452099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 22604602 - 22604702
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    ||||| |||||| |||||||| ||||||||||| |||| |||||  |||||||||||||||| ||||||  |||||||||||||||  ||||||||||||    
T  22604602 cactcatttattggataaaattaatgtatgtcccaccattttgtgggagttcaattttcaaaatgtagactcacaatgatttaaacttataagagagtga 22604701  T
Q  229 g 229  Q
    |    
T  22604702 g 22604702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 93 - 230
Target Start/End: Complemental strand, 55452187 - 55452052
Alignment:
Q  93 tagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagt 192  Q
    ||||||||||||||||| |||||||||| ||| |  |||||||||||| |||  |||  |||||||||| ||||||||||  | |||| |||| ||||||    
T  55452187 tagcaacactcacttttgaacactctctggtact--cactcttttattggatggaatacatgtatgtcccaccactttgtgtgggttctatttccaaagt 55452090  T
Q  193 gtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||  || |||||||||||||||| | |||||||||    
T  55452089 gtagactcataatgatttaaaccaatgaaagagtgagt 55452052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 135 - 220
Target Start/End: Complemental strand, 19345132 - 19345047
Alignment:
Q  135 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    |||||| ||| |||||||||||||||| ||||||||||  | |||||||||||||| ||||||  |||||||||||||||||||||    
T  19345132 tttattggatgaaatcaatgtatgtcccaccactttgttggggttcaattttcaaattgtagactcacaatgatttaaaccaataa 19345047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 94 - 230
Target Start/End: Complemental strand, 50156831 - 50156697
Alignment:
Q  94 agcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtg 193  Q
    |||||||||||||||||||||| ||||  || ||||  |  ||||||  || |||| ||||||||| | || ||||||   | |||||||||| ||||||    
T  50156831 agcaacactcacttttcaacacactctgatacttac--ttatttattgaatgaaattaatgtatgttccacaactttgcgggggttcaattttaaaagtg 50156734  T
Q  194 tagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||| ||||||||||||||||||||||||||||||||    
T  50156733 tagacccacaatgatttaaaccaataagagagtgagt 50156697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 29755500 - 29755636
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| ||||||||||||||||||||||| |||||   |    |||||||||||   ||| ||||||| |||||   || |||||||  | ||||||||||    
T  29755500 gaatgctagcaacactcacttttcaacattctctttaacacccactcttttatcgaatagaatcaatatatgtttcactactttgtgtgggttcaatttt 29755599  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagag 223  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29755600 caaagtgtagatcaacaatgatttaaaccaataagag 29755636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 52124077 - 52123993
Alignment:
Q  146 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||| ||||||||||| || | |||||  | ||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  52124077 aaattaatgtatgtcccactattttgtgggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagaaagtgagt 52123993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 14236061 - 14236162
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||| ||||||| ||| |||||||| ||||||| |||||||| |  |||||| |||| ||||||||||||||||||| ||||| |||||||| | |||||    
T  14236061 cactattttattggatgaaatcaatatatgtcccaccactttatgcgagttctatttccaaagtgtagatccacaataatttagaccaataaaaaagtga 14236160  T
Q  229 gt 230  Q
    ||    
T  14236161 gt 14236162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 448 - 521
Target Start/End: Original strand, 50056893 - 50056966
Alignment:
Q  448 tatataaacacattagtagttgtgcattttttatctctgaaatataatgtttagttttcacgtggcatcagagc 521  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||| || ||||||||| ||| ||||||||    
T  50056893 tatataaacacattagtggttgtacattatttatctctgaaatataatattcagttttcacatggtatcagagc 50056966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 26310583 - 26310495
Alignment:
Q  130 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaat 218  Q
    ||||||||||| ||| |||||||||||||||| |||| ||| |    ||||||||||||||||||||| ||| ||||||||||||||||    
T  26310583 actcttttattggatgaaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgtagacccataatgatttaaaccaat 26310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 10948676 - 10948589
Alignment:
Q  151 aatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaaga 238  Q
    ||||||||| | ||||||||||    |||||||||| |||||||| | |||||||||||||||||||||| ||||||||| |||||||    
T  10948676 aatgtatgttccaccactttgtgtttgttcaatttttaaagtgtaaacccacaatgatttaaaccaataaaagagtgagtattaaaga 10948589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 230
Target Start/End: Original strand, 27243050 - 27243189
Alignment:
Q  92 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 191  Q
    |||||||||||| ||||| ||||||||||   |    |||||||||||| ||||||||||||| |||||| |||||||| |  | |||| |||| |||||    
T  27243050 ctagcaacactctcttttgaacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaag 27243149  T
Q  192 tgta-gatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||| || ||||| |||||||| ||||| |||||||||||    
T  27243150 tgtatgacccacattgatttaacccaatgagagagtgagt 27243189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 24429124 - 24429062
Alignment:
Q  168 tttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||| || |||||||||| ||||||||||||||||||||||||||||||||| | |||||||    
T  24429124 tttgtgagggttcaatttttaaagtgtagatccacaatgatttaaaccaataaaatagtgagt 24429062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 448 - 536
Target Start/End: Complemental strand, 28096039 - 28095952
Alignment:
Q  448 tatataaacacattagtagttgtgcatt-ttttatctctgaaatataatgtttagttttcacgtggcatcagagctcctgatcttggggg 536  Q
    ||||||||||||||||| |||||  ||| |||||||||||||||||||| ||| |||||||| ||||||  ||||||| |||||||||||    
T  28096039 tatataaacacattagtggttgtaaattattttatctctgaaatataatattttgttttcacatggcat--gagctcccgatcttggggg 28095952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 195
Target Start/End: Original strand, 30624631 - 30624739
Alignment:
Q  85 atgaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||||| |||||||||||||||||| | |||||||||  | |  ||||||||||||  ||||||| |||||||||   ||||||||||  ||||||||||    
T  30624631 atgaatgctagcaacactcacttttgagcactctctaacact--cactcttttattgaataaaattaatgtatgtttcaccactttgtgtgagttcaatt 30624728  T
Q  185 ttcaaagtgta 195  Q
    |||||| ||||    
T  30624729 ttcaaaatgta 30624739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 38138664 - 38138613
Alignment:
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaa 236  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| |||||    
T  38138664 ttcaaagtatagatccacaatgatttaaaccaataagagagtaagtattaaa 38138613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 230
Target Start/End: Original strand, 41387568 - 41387704
Alignment:
Q  92 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 191  Q
    ||||||||||||| | ||||||||||||||| | |  ||||| |||||| ||| ||||| |||||| ||  || | |||||  | ||| |||||||||||    
T  41387568 ctagcaacactcattattcaacactctctagcact--cactcatttattggattaaatcgatgtatatcacactattttgtgtgggtttaattttcaaag 41387665  T
Q  192 tgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    || ||| |||||||||||||| | ||||||||| |||||    
T  41387666 tgcagacccacaatgatttaatcaaataagagattgagt 41387704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 49072064 - 49072138
Alignment:
Q  146 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    |||| ||| ||||||  ||||||||||| |||||  |||||||||||||||| ||||||| ||||||||||||||    
T  49072064 aaattaatttatgtctcaccactttgtatgagttatattttcaaagtgtagacccacaataatttaaaccaataa 49072138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 100 - 238
Target Start/End: Original strand, 138778 - 138914
Alignment:
Q  100 actcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatc 199  Q
    ||||| ||||||| ||||||||| | |  ||||||||||||  || |||||||||||||||  |||| |||||| |  ||||||||| ||| |||| |      
T  138778 actcagttttcaagactctctagcact--cactcttttattgaatgaaatcaatgtatgtctcaccattttgtatgtattcaatttttaaaatgtaaact 138875  T
Q  200 cacaatgatttaaaccaataagagagtgagttttaaaga 238  Q
     ||||||||||||| |||||| ||||| ||| |||||||    
T  138876 tacaatgatttaaatcaataaaagagtaagtattaaaga 138914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 7419316 - 7419241
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaa 204  Q
    ||||||||||||||||||||| ||| |||||||  | | |||||  |||||| |||| ||||||||||||||||||    
T  7419316 cactcttttattagataaaataaatatatgtccctctattttgtgtgagttctatttccaaagtgtagatccacaa 7419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 15790501 - 15790407
Alignment:
Q  135 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||| |||||||||||||||||||  |||| ||| |    |  |||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  15790501 tttattggataaaatcaatgtatgtctcaccattttatggtgggacaattttcaaagtgtagg-ccataatgatttaaaccaataagagagtgagt 15790407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 22856325 - 22856282
Alignment:
Q  176 agttcaattttcaaagtgtagatccacaatgatttaaaccaata 219  Q
    |||| ||||||||||||||||||||||||| |||||||||||||    
T  22856325 agtttaattttcaaagtgtagatccacaattatttaaaccaata 22856282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 132 - 230
Target Start/End: Original strand, 44844026 - 44844125
Alignment:
Q  132 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta-gatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||  ||||||| ||||||||||| |||| ||  |  |||||||||||| |||||||| || |||||||||||||| ||||||| | |||||||    
T  44844026 tcttttattgaataaaataaatgtatgtcccaccatttcatgtgagttcaatttttaaagtgtatgacccacaatgatttaatccaataaaaaagtgagt 44844125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 130 - 220
Target Start/End: Complemental strand, 50661659 - 50661568
Alignment:
Q  130 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta-gatccacaatgatttaaaccaataa 220  Q
    ||||||||||||||||||||||||| |||||| |||||||| |  | |||| |||| |||| |||| || ||||| |||||||| |||||||    
T  50661659 actcttttattagataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaaatgtatgacccacattgatttaacccaataa 50661568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 752461 - 752535
Alignment:
Q  156 atgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||| ||||||||||  | |||| ||||  |||||||||| |||||||||||||||| ||||||||| |||||    
T  752461 atgtcccaccactttgtgtgggttctatttctaaagtgtagacccacaatgatttaaactaataagagaatgagt 752535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 29388684 - 29388634
Alignment:
Q  177 gttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 227  Q
    |||||||||||||||||||||  |||||||||||||  |||||||||||||    
T  29388684 gttcaattttcaaagtgtagactcacaatgatttaagtcaataagagagtg 29388634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 39186028 - 39186102
Alignment:
Q  151 aatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagag 225  Q
    ||||||||||  |||||||| |  |||||| |||| |||||||||||||  |||||||||||| |||||||||||    
T  39186028 aatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaatcaataagagag 39186102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 43016502 - 43016556
Alignment:
Q  176 agttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||| ||||| ||||| || ||||||||||| ||||||||||||||||    
T  43016502 agttcaatttttaaagtatagattcataatgatttaaatcaataagagagtgagt 43016556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 560
Target Start/End: Original strand, 50057279 - 50057325
Alignment:
Q  514 atcagagctcctgatcttggggggtcttgtttccgcataaaccctag 560  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  50057279 atcagagctcccgatcttggggggtgttgcttccgcataaaccctag 50057325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 224
Target Start/End: Original strand, 13809087 - 13809219
Alignment:
Q  92 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 191  Q
    |||||||||||| |||||  |||||||||   | || |||||||||||| |||||||||||||||||||| |||| ||| |  | |||| |||| |||||    
T  13809087 ctagcaacactctcttttacacactctctctaactt-cactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaag 13809185  T
Q  192 tgta-gatccacaatgatttaaaccaataagaga 224  Q
    | || || ||||| || ||||| |||||||||||    
T  13809186 tatatgacccacattgttttaacccaataagaga 13809219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 40702289 - 40702173
Alignment:
Q  98 acactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtaga 197  Q
    ||||||||||||||||||||||||| | ||  ||||||||||  ||| |||| ||||||||  | | |||||| |  | |||||||||| ||||| | ||    
T  40702289 acactcacttttcaacactctctagcactt--actcttttatatgatgaaattaatgtatgatccatcactttatgtgggttcaatttttaaagttttga 40702192  T
Q  198 tccacaatgatttaaacca 216  Q
    |||||| | ||||||||||    
T  40702191 tccacagtaatttaaacca 40702173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 41707577 - 41707490
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaacca 216  Q
    |||||| | ||| ||||||||||||||||||   | ||||||||  | |||||||||| ||||| |||| ||||||| ||||||||||    
T  41707577 cactctctcattggataaaatcaatgtatgtttcatcactttgtgtgggttcaatttttaaagtatagacccacaataatttaaacca 41707490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 43657134 - 43657067
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 196  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| |||| ||||||||||    
T  43657134 cactattttatttgatgaaatcaatgtatgtcccaccactttatgtgagttccatttccaaagtgtag 43657067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 593
Target Start/End: Original strand, 50057409 - 50057488
Alignment:
Q  514 atcagagctcctgatcttggggggtcttgtttccgcataaaccctagttgcagtccttgcaattacttttgcttttttcg 593  Q
    ||||||||||| ||||||||||||  ||| |||| ||||||||||||  || ||| ||||  |||||||| |||||||||    
T  50057409 atcagagctcccgatcttggggggcgttgcttccacataaaccctagccgccgtctttgcggttactttttcttttttcg 50057488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 495
Target Start/End: Original strand, 50061382 - 50061429
Alignment:
Q  448 tatataaacacattagtagttgtgcattttttatctctgaaatataat 495  Q
    ||||||||||||||||| ||| | |||| |||||||||||||||||||    
T  50061382 tatataaacacattagtcgttctacattatttatctctgaaatataat 50061429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 742057 - 742099
Alignment:
Q  188 aaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||| |||||||||||||||| ||||||||| |||||    
T  742057 aaagtgtagacccacaatgatttaaactaataagagaatgagt 742099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 250
Target Start/End: Complemental strand, 40716036 - 40715879
Alignment:
Q  93 tagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaa 190  Q
    ||||||||||||||||||||||||||||  || | |  |||||||||||  | | |||| |||||||| |  | ||||||||  | |||||||||| |||    
T  40716036 tagcaacactcacttttcaacactctctctagcact--cactcttttatatggtgaaattaatgtatgactcatcactttgtgtgggttcaatttttaaa 40715939  T
Q  191 gtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 250  Q
     ||| ||   |||||||||||||| |||| |||| ||| | ||||| || ||||||||||    
T  40715938 atgttgacatacaatgatttaaactaataggagattgaatattaaaaaatatgtttaaaa 40715879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 41607499 - 41607544
Alignment:
Q  175 gagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    ||||| ||||||||||||||||||||||| | ||||||| ||||||    
T  41607499 gagtttaattttcaaagtgtagatccacagttatttaaatcaataa 41607544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 42340873 - 42340958
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaac 214  Q
    |||||||||||||||  | || |||| |||||  |||||||||||   | | ||||||||||||| ||| ||||||||||||||||    
T  42340873 cactcttttattagaagatataaatgcatgtctcaccactttgtattggcttaattttcaaagtgcagacccacaatgatttaaac 42340958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 46237184 - 46237143
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccacttt 170  Q
    |||||||||||| ||| |||||||||||||||| ||||||||    
T  46237184 cactcttttattggatgaaatcaatgtatgtcccaccacttt 46237143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 2e-36; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 92 - 230
Target Start/End: Original strand, 34905341 - 34905479
Alignment:
Q  92 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 191  Q
    ||||||||||||| |||||||||||||||   |    |||||||||||| ||| |||||||||||||||| ||||||||||  | |||||||||||||||    
T  34905341 ctagcaacactcatttttcaacactctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaag 34905440  T
Q  192 tgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  34905441 tgtagacccacaatgatttaaaccaataagagagtgagt 34905479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 16852105 - 16852013
Alignment:
Q  135 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 227  Q
    |||||||||| |||| ||||||||||| ||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16852105 tttattagatgaaataaatgtatgtcccaccactttgtaggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtg 16852013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 10133328 - 10133188
Alignment:
Q  97 aacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 196  Q
    ||||||||||||||||||||||||   |    ||||| |||||| ||| |||| | ||||||||| |||||||| |  | ||||||||||||||||||||    
T  10133328 aacactcacttttcaacactctctctaacactcactcatttattggatgaaattattgtatgtcccaccactttatgggggttcaattttcaaagtgtag 10133229  T
Q  197 atccacaatgatttaaaccaataagagagtgagttttaaag 237  Q
    | |||||||||||||||||||||| ||||||||| ||||||    
T  10133228 aaccacaatgatttaaaccaataaaagagtgagtattaaag 10133188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 445818 - 445961
Alignment:
Q  87 gaatactagcaacactcacttttcaacact--ctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||| ||||||| ||||| |||||||||||  |||||| | |  |||| ||||||| ||| |||||||||||||||  ||||||||||  | ||||||||    
T  445818 gaatgctagcaatactcatttttcaacactatctctagcact--cacttttttattggatgaaatcaatgtatgtcacaccactttgtgtgggttcaatt 445915  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||| ||||  ||||||||||||||||||||||||| |||||    
T  445916 ttcaaagtctagagtcacaatgatttaaaccaataagagaatgagt 445961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 5106340 - 5106439
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||| ||||||| |||||||||||||||||||| ||||||||||  | | ||||||||||||||||| | |||||| ||||||||||||||| |||||||    
T  5106340 cacttttttattggataaaatcaatgtatgtcccaccactttgtgtgggatcaattttcaaagtgtacacccacaaggatttaaaccaataatagagtga 5106439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 95 - 230
Target Start/End: Complemental strand, 31116296 - 31116161
Alignment:
Q  95 gcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgt 194  Q
    ||||||||||||||| ||||||||||   |  | ||||||| |||| ||| |||||||||||||||| || |||||||  | |||| |||| ||| ||||    
T  31116296 gcaacactcacttttgaacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgt 31116197  T
Q  195 agatccacaatgatttaaaccaataagagagtgagt 230  Q
    | | ||||||||||||||||||||||||||||||||    
T  31116196 aaacccacaatgatttaaaccaataagagagtgagt 31116161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 21987334 - 21987435
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||| ||||||| ||| |||||||||||| ||| |||||||| |  |||||| |||| |||||||||||||| ||||||||||||||||||||| |||||    
T  21987334 cactattttattggatgaaatcaatgtatatcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaaccaataagaaagtga 21987433  T
Q  229 gt 230  Q
    ||    
T  21987434 gt 21987435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 97 - 230
Target Start/End: Original strand, 1392640 - 1392770
Alignment:
Q  97 aacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 196  Q
    ||||||||||||| |||||||||||| | |  |  | ||||||| ||| |||||||||||||||  || |||||||| | |||||||||| ||| |||||    
T  1392640 aacactcactttttaacactctctagcact--ctattttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag 1392737  T
Q  197 atccacaatgatttaaaccaataagagagtgagt 230  Q
      ||||||||||||||||||||||||||||||||    
T  1392738 c-ccacaatgatttaaaccaataagagagtgagt 1392770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 32122843 - 32122928
Alignment:
Q  135 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    |||||| ||| |||||||| ||||||| |||| |||||  ||||||||||||||||||||||| |||||||||||||| |||||||    
T  32122843 tttattggatgaaatcaatatatgtcccaccattttgtgggagttcaattttcaaagtgtagacccacaatgatttaagccaataa 32122928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 129 - 250
Target Start/End: Complemental strand, 32599086 - 32598965
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||||||| |||  |||  ||||||||||  |||||||||  | || | |||| |||||||||||| |||||||||||||| |||||| |||||||    
T  32599086 cactcttttattggatggaatacatgtatgtcccgccactttgtgtgggtgctatttccaaagtgtagattcacaatgatttaaatcaataaaagagtga 32598987  T
Q  229 gttttaaagaaaatgtttaaaa 250  Q
    || ||||||| |||||||||||    
T  32598986 gtattaaagagaatgtttaaaa 32598965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 32112850 - 32112734
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtttt 233  Q
    ||||||| ||| ||||||||| |||||  |||| |||||  | |||  |||||||||||||||||||||||||||||||| |||||||||||||| | ||    
T  32112850 ttttattggatgaaatcaatgcatgtcacaccattttgtgtgggttttattttcaaagtgtagatccacaatgatttaaaacaataagagagtgaatatt 32112751  T
Q  234 aaagaaaatgtttaaaa 250  Q
    | ||| |||||| ||||    
T  32112750 agagagaatgttcaaaa 32112734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 12780892 - 12780805
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataag 221  Q
    ||||||||| |  ||||||||||||||  || |||||||    |||||||||||||||||||||||||||||||||||||||||||||    
T  12780892 ttttattaggtggaatcaatgtatgtctcactactttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataag 12780805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 12785059 - 12784982
Alignment:
Q  147 aatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagaga 224  Q
    ||||||||||||||  || ||||| |   |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12785059 aatcaatgtatgtcttactactttatgttagttcaattttcaaagtgtagatccataatgatttaaaccaataagaga 12784982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 2675937 - 2676038
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    ||||||||||||  || || ||||||||||||| ||||||||||    ||| |||||||||| |||||| |||||||| ||||||||||||| | |||||    
T  2675937 cactcttttattgaatgaattcaatgtatgtcccaccactttgtttaggtttaattttcaaaatgtagacccacaatggtttaaaccaataaaaaagtga 2676036  T
Q  229 gt 230  Q
    ||    
T  2676037 gt 2676038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 16187523 - 16187469
Alignment:
Q  176 agttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||| ||||||||    
T  16187523 agttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagt 16187469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 16187741 - 16187687
Alignment:
Q  176 agttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||| ||||||||    
T  16187741 agttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagt 16187687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 35128898 - 35128769
Alignment:
Q  92 ctagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaa 189  Q
    |||||||||||| ||||| ||||||||||  || | |  |||||||||||| | |||||||||||||||||| |||||||| |  | |||| ||||||||    
T  35128898 ctagcaacactctcttttgaacactctctctagcagt--cactcttttattgggtaaaatcaatgtatgtcccaccactttatgtgggttccattttcaa 35128801  T
Q  190 agtgtagatcc-acaatgatttaaaccaataa 220  Q
    ||||||| ||| ||| |||||| | |||||||    
T  35128800 agtgtaggtcctacattgatttcacccaataa 35128769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 19090353 - 19090251
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 227  Q
    |||||||||||| | | |||||||||||||||| |||||||| |  | |||| |||| |||||||||| ||| ||| ||| || ||||||||| ||||||    
T  19090353 cactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgaattcaaccaataaaagagtg 19090254  T
Q  228 agt 230  Q
    |||    
T  19090253 agt 19090251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 17144757 - 17144700
Alignment:
Q  181 aattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaaga 238  Q
    ||||||||||||||||| |||||||||||||||| |||||  |||| ||| |||||||    
T  17144757 aattttcaaagtgtagacccacaatgatttaaactaataaaggagtaagtattaaaga 17144700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 230
Target Start/End: Complemental strand, 34882300 - 34882267
Alignment:
Q  197 atccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||||||||||||||||||||||||||    
T  34882300 atccacaatgatttaaaccaataagagagtgagt 34882267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 12753940 - 12753797
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattt 185  Q
    |||| |||||||||||||||||| |||||||| || ||   | |||||||| ||| ||||||||  ||| |||||| ||||||||||  | |||| ||||    
T  12753940 gaatgctagcaacactcacttttgaacactcttta-tagcaatcactctttcattggataaaatacatgcatgtcccaccactttgtgtgggttctattt 12753842  T
Q  186 tcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||  ||||| |  ||||||||||||||| ||||| |||| ||||    
T  12753841 tcagggtgtacactcacaatgatttaaactaataaaagagcgagt 12753797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 8441941 - 8441886
Alignment:
Q  175 gagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||||||||||||||| |  |||| || ||||||||||| |||||||||    
T  8441941 gagttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagt 8441886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 8450745 - 8450690
Alignment:
Q  175 gagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||||||||||||||| |  |||| || ||||||||||| |||||||||    
T  8450745 gagttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagt 8450690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 120
Target Start/End: Original strand, 12753758 - 12753791
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctct 120  Q
    ||||||||||||||||| ||||||||||||||||    
T  12753758 gaatactagcaacactctcttttcaacactctct 12753791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 2e-35; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 130 - 250
Target Start/End: Original strand, 39471200 - 39471320
Alignment:
Q  130 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgag 229  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  39471200 actcttttattagatgaaatcaatgtatgtcccaccactttgtgttggttcaatcttcaaagtgtagacccacaatgatttaaaccaataagagagtgag 39471299  T
Q  230 ttttaaagaaaatgtttaaaa 250  Q
    | ||| ||| |||||||||||    
T  39471300 tattagagagaatgtttaaaa 39471320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 43771132 - 43771277
Alignment:
Q  93 tagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 191  Q
    ||||||||||||||||| ||||||||||  |||    |||||||||||| ||| |||||||||||||||| |||||| |||  | |||||||||||||||    
T  43771132 tagcaacactcacttttgaacactctctc-tatgactcactcttttattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaattttcaaag 43771230  T
Q  192 tgtagatccacaatgatttaaaccaataagagagtgagttttaaaga 238  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||    
T  43771231 tgtagacccacaatgatttaaaccaataagagagtgagtattaaaga 43771277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 90 - 230
Target Start/End: Original strand, 20454543 - 20454681
Alignment:
Q  90 tactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttc 187  Q
    ||||||||||||| |||||||||||||||||  || | |  ||||||||||||||||||||||||||||||||||  ||||||||    |||||||||||    
T  20454543 tactagcaacacttacttttcaacactctctctagcact--cactcttttattagataaaatcaatgtatgtcca--cactttgtgttggttcaattttc 20454638  T
Q  188 aaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||||||||||||||||||| |||||| |||||||||    
T  20454639 aaagtgtagatccacaatgatttaaatcaataacagagtgagt 20454681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 96 - 228
Target Start/End: Complemental strand, 10169814 - 10169684
Alignment:
Q  96 caacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta 195  Q
    ||||| |||||||||||||||||||| ||||  |||||| ||||| ||| |||||||| ||||||| ||||||||||  ||||||||||||||||   ||    
T  10169814 caacattcacttttcaacactctctaatatt--cactctattattggatgaaatcaatatatgtcctaccactttgtgtgagttcaattttcaaaacata 10169717  T
Q  196 gatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||||| ||||||||||||||||||||||    
T  10169716 gatccacaattatttaaaccaataagagagtga 10169684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 92 - 230
Target Start/End: Original strand, 8108961 - 8109099
Alignment:
Q  92 ctagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaa 189  Q
    |||||||||||||||||||||||||||||  || | |  |||||||||||| | | |||||||||||||||| || | |||||    |||||||||||||    
T  8108961 ctagcaacactcacttttcaacactctctctagcact--cactcttttattgggtgaaatcaatgtatgtcccactaatttgtgtttgttcaattttcaa 8109058  T
Q  190 agtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||| |||||||||||||||||||||||| |||||||    
T  8109059 agtgtagacccacaatgatttaaaccaataagaaagtgagt 8109099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 50164395 - 50164537
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    ||||||||| ||||||||||||| ||||||||||  || | |  ||||| |||||| |||||||||||||||| ||| |||| |||||  | ||||||||    
T  50164395 gaatactagtaacactcactttttaacactctctctagcact--cactcatttattggataaaatcaatgtatctcccaccattttgtgggggttcaatt 50164492  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgag 229  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||    
T  50164493 ttcaaagtgtagactcacaatgatttaaaccaataagaaagtgag 50164537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 722199 - 722300
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||| ||||||| ||| ||||||| |||||||| ||||||||||   ||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  722199 cacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtga 722298  T
Q  229 gt 230  Q
    ||    
T  722299 gt 722300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 47009231 - 47009332
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||||||| |||||||| ||||| ||||  ||| ||||||  |||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  47009231 cactcttttattggataaaattaatgtttgtctcaccgctttgtgtgagttcaattttcaaagtgtagatacacaatgatttaaaccaataagaaagtga 47009330  T
Q  229 gt 230  Q
    ||    
T  47009331 gt 47009332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 33653669 - 33653526
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattt 185  Q
    |||| ||||||||||||| |||||||||||||||  |||| | ||||| |||||| ||| |||||||||||||||| |||| |||||  |  ||||||||    
T  33653669 gaatgctagcaacactcagttttcaacactctctc-tattaatcactcatttatttgatgaaatcaatgtatgtcccaccattttgtggggtttcaattt 33653571  T
Q  186 tcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||| | | ||||||||||||||||||||||||||| |||||||    
T  33653570 tcaaaatattgatccacaatgatttaaaccaataagaaagtgagt 33653526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 49077249 - 49077385
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||| ||||||||||||| ||||||||| |||||  || | |  || |||||||||||||||||| ||| ||||||| ||||||||||  | ||||||||    
T  49077249 gaatgctagcaacactcagttttcaacattctctttagcact--cattcttttattagataaaattaatatatgtcccaccactttgtgtgggttcaatt 49077346  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagag 223  Q
    || |||||||||| |||||||||||||||||||||||||    
T  49077347 tttaaagtgtagacccacaatgatttaaaccaataagag 49077385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 754718 - 754617
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||| ||||||| ||| || |||| |||||||| ||||||||||   ||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  754718 cacttttttattggatgaactcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtga 754619  T
Q  229 gt 230  Q
    ||    
T  754618 gt 754617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 87 - 225
Target Start/End: Complemental strand, 20225519 - 20225383
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| |||||||||||||||||| |||||||||||| | |  |||||||||||| |||  |||| ||| |||||| |||||||| |  | |||| ||||     
T  20225519 gaatgctagcaacactcacttttgaacactctctagcact--cactcttttattggatggaatccatgcatgtcccaccactttttgtgggttctatttc 20225422  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagag 225  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  20225421 caaagtgtagactcacaatgatttaaaccaataagagag 20225383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 24834625 - 24834719
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    ||||||| |||  ||||||||||||||| |||| |||||  | ||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  24834625 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtga 24834719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 26361480 - 26361345
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| |||||||||||||||||||||||||||         ||||||||||||| ||| || |||||||||| || |||| |||||  | ||||||| ||    
T  26361480 gaatgctagcaacactcacttttcaacactcta--------acactcttttattggatgaagtcaatgtatgacccaccattttgtgtgggttcaatatt 26361389  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||    
T  26361388 caaagtgtagacccataatgatttaaaccaataagtgagtgagt 26361345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 129 - 250
Target Start/End: Complemental strand, 24938553 - 24938432
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||||||| |||  ||||||||||||||| |||| |||||  |  ||||||||| |||||||||| | |||||||||||||||||||||||||| |    
T  24938553 cactcttttattggatgtaatcaatgtatgtcccaccattttgtttggattcaatttttaaagtgtagacctacaatgatttaaaccaataagagagtaa 24938454  T
Q  229 gttttaaagaaaatgtttaaaa 250  Q
    || ||| ||||| |||| ||||    
T  24938453 gtattagagaaagtgttgaaaa 24938432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 50481683 - 50481584
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||||||| ||| ||||||| |||||||  ||||||||||| |  ||| ||||||||||||||||  |||||| ||||||||||||||||||||||    
T  50481683 cactcttttattggatgaaatcaaagtatgtctcaccactttgtatggtttctattttcaaagtgtagacacacaatcatttaaaccaataagagagtga 50481584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 49242212 - 49242313
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||| ||| ||| ||| |||||||| ||||||| | ||||||||  | ||||||||||||| |||||||| ||||||||||||||||||||||||| |||    
T  49242212 cactttttaattggatgaaatcaatatatgtcccatcactttgtgtgggttcaattttcaatgtgtagattcacaatgatttaaaccaataagagaatga 49242311  T
Q  229 gt 230  Q
    ||    
T  49242312 gt 49242313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 22542424 - 22542530
Alignment:
Q  130 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgag 229  Q
    |||||||||||  || ||||||| |||||| | ||||||||||  | |||||||||||||||  |||  |||||||||||||||| ||||||||||||||    
T  22542424 actcttttattgaatgaaatcaaagtatgttccaccactttgtgtgggttcaattttcaaagaatagtcccacaatgatttaaactaataagagagtgag 22542523  T
Q  230 ttttaaa 236  Q
    | |||||    
T  22542524 tattaaa 22542530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 19937341 - 19937189
Alignment:
Q  97 aacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 196  Q
    ||||||||||||| ||  |||||||| ||||| | | ||| ||| |||| ||||||||||||||| |||| | | |  |||||| ||||||||||| |||    
T  19937341 aacactcacttttaaattctctctagcattta-attttttaattggatacaatcaatgtatgtcccaccattatatgtgagttctattttcaaagtatag 19937243  T
Q  197 atccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 250  Q
    ||| ||||||||| ||||||| || ||||||||  ||||||| | |||||||||    
T  19937242 atcgacaatgattcaaaccaacaaaagagtgagaattaaagagagtgtttaaaa 19937189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 34129538 - 34129437
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    ||||||| |||| ||| | |||||||||| ||| ||||||||||  | |||||||||||||||||| ||  ||||||| ||||||||||||| |||||||    
T  34129538 cactcttctattggatgagatcaatgtatatcccaccactttgtgtgtgttcaattttcaaagtgtggactcacaatggtttaaaccaataaaagagtga 34129439  T
Q  229 gt 230  Q
    ||    
T  34129438 gt 34129437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 129 - 250
Target Start/End: Original strand, 52671872 - 52671993
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||| ||||||| ||| |||| ||||||||||| |||| ||| |   ||||||||||| |||||||| || | ||||||||||||| ||||||| |||||    
T  52671872 cacttttttattggatgaaataaatgtatgtcccaccattttatgtaagttcaatttttaaagtgtaaattctcaatgatttaaactaataagatagtga 52671971  T
Q  229 gttttaaagaaaatgtttaaaa 250  Q
    || ||||||| | |||||||||    
T  52671972 gtattaaagagagtgtttaaaa 52671993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 250
Target Start/End: Complemental strand, 37451149 - 37451030
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||||||| |||| |||| |||||  ||  |||| |||||  |||||| ||||||||||||||||  | ||||||||||||||||||| |||||||    
T  37451149 cactcttttattggatagaatccatgtacatcttaccaatttgt--gagttctattttcaaagtgtagactcgcaatgatttaaaccaataaaagagtga 37451052  T
Q  229 gttttaaagaaaatgtttaaaa 250  Q
    || ||| ||||  |||||||||    
T  37451051 gtattagagaaggtgtttaaaa 37451030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 48339478 - 48339380
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 227  Q
    |||||| ||||| ||  |||||||||||||| | ||||||||||  | ||||||||||||||| ||||| ||| |||| ||||||||||||| ||||||    
T  48339478 cactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaaaccaataaaagagtg 48339380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 38636379 - 38636472
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 222  Q
    |||||||||||| |||||||||||||||||||  || ||||| |  | ||  |||||| |||||||||||||||||||||||| | ||||||||    
T  38636379 cactcttttatttgataaaatcaatgtatgtctcactactttatgtgggtctaatttttaaagtgtagatccacaatgatttatatcaataaga 38636472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 31251015 - 31250924
Alignment:
Q  135 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 226  Q
    |||||| ||| |||||||||||||||| |||| ||| |    |||||||||||||| |||||| ||||||||||||||| |||||| |||||    
T  31251015 tttattggatgaaatcaatgtatgtcccaccattttatggacgttcaattttcaaaatgtagacccacaatgatttaaatcaataaaagagt 31250924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 38537649 - 38537560
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt---caaagtgtagatccacaatgatttaaaccaataa 220  Q
    ||||||| ||| |||||||||||||||  || |||||||| ||||||||||||   |||||||||||| || ||||||||||| ||||||    
T  38537649 ttttatttgatgaaatcaatgtatgtcttactactttgtatgagttcaattttcaacaaagtgtagattcataatgatttaaatcaataa 38537560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 45311078 - 45310989
Alignment:
Q  137 tattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 226  Q
    |||| ||| |||||||| ||||||| ||||||||||  |  |||||||||||||||| |||   ||||||||||||| ||||||||||||    
T  45311078 tattggatgaaatcaatatatgtcccaccactttgtggggattcaattttcaaagtgaagacttacaatgatttaaatcaataagagagt 45310989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 448 - 508
Target Start/End: Original strand, 11393149 - 11393209
Alignment:
Q  448 tatataaacacattagtagttgtgcattttttatctctgaaatataatgtttagttttcac 508  Q
    ||||||||||||| ||| ||||| |||| ||||||||||||||||||| || |||||||||    
T  11393149 tatataaacacatcagtggttgtacattatttatctctgaaatataatattaagttttcac 11393209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 448 - 508
Target Start/End: Original strand, 11402876 - 11402936
Alignment:
Q  448 tatataaacacattagtagttgtgcattttttatctctgaaatataatgtttagttttcac 508  Q
    ||||||||||||| ||| ||||| |||| ||||||||||||||||||| || |||||||||    
T  11402876 tatataaacacatcagtggttgtacattatttatctctgaaatataatattaagttttcac 11402936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 40991769 - 40991626
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattt 185  Q
    |||| |||||||||||||||||||||||||||||  |||    |||||||| ||| ||| |||||||| ||||||| ||| | |||||   |  | ||||    
T  40991769 gaatgctagcaacactcacttttcaacactctctc-tatcactcactctttcattggatgaaatcaatatatgtcccaccccattgtattggcactattt 40991671  T
Q  186 tcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
       ||||||||| |||||||||||||||||||||| |||||||||    
T  40991670 ctgaagtgtagacccacaatgatttaaaccaataaaagagtgagt 40991626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 211
Target Start/End: Complemental strand, 46242113 - 46242000
Alignment:
Q  96 caacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta 195  Q
    |||||||||||||| |||||||||||| | | |||||  |||||  ||| |||||| ||||||||| |||| |||||    |||||||||||||| | ||    
T  46242113 caacactcactttttaacactctctagaactcacact--tttatgggatgaaatcattgtatgtcccaccattttgtgtaggttcaattttcaaaatata 46242016  T
Q  196 gatccacaatgattta 211  Q
    || |||||||||||||    
T  46242015 gacccacaatgattta 46242000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 5044678 - 5044587
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    |||| ||||||| ||| |||||||| ||||||  || | |||||  |||||||||||| ||| |||||| |||||| |||||||||||||||    
T  5044678 cacttttttattggatgaaatcaatatatgtcacactattttgtgtgagttcaatttttaaaatgtagacccacaacgatttaaaccaataa 5044587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 49682929 - 49682838
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    |||| ||||||  ||| |||||||||||| ||  |||||||| |  || |||||||||||||||||||| |||||  |||||||||||||||    
T  49682929 cacttttttatcggatgaaatcaatgtatatctcaccactttatttgaattcaattttcaaagtgtagagccacatcgatttaaaccaataa 49682838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 93 - 208
Target Start/End: Original strand, 50571870 - 50571985
Alignment:
Q  93 tagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaa 190  Q
    |||||||| |||||||||||||||||||  || | ||||  ||||||||||||| ||||||||||||| || | || ||| |  |  |||||||||||||    
T  50571870 tagcaacagtcacttttcaacactctctctagcacttac--tcttttattagatgaaatcaatgtatgccccatcaatttatgtggcttcaattttcaaa 50571967  T
Q  191 gtgtagatccacaatgat 208  Q
    ||||||| || |||||||    
T  50571968 gtgtagacccgcaatgat 50571985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 11895134 - 11895180
Alignment:
Q  184 tttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||    
T  11895134 tttcaaagtgtagacccacaatgatttgaacgaataagagagtgagt 11895180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 250
Target Start/End: Original strand, 13069983 - 13070104
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 227  Q
    |||||||||||| | | |||||||||||||| | |||||||| |  | |||| ||||||||||||||| ||| ||| |||||| |  |||||| ||||||    
T  13069983 cactcttttattgg-tgaaatcaatgtatgttccaccactttatgtgggttccattttcaaagtgtaggtcctacattgattttactcaataaaagagtg 13070081  T
Q  228 agttttaaagaaaatgtttaaaa 250  Q
    ||| ||| |||||||||| ||||    
T  13070082 agtgttagagaaaatgttcaaaa 13070104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 250
Target Start/End: Complemental strand, 25719251 - 25719129
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag-atccacaatgatttaaaccaataagagagtg 227  Q
    |||||| ||||| | | |||||||||||||||| |||||||| |  | |||  |||| |||| ||||| | |||||||||||||| ||||| ||||||||    
T  25719251 cactctcttattggttgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaaatgtaggacccacaatgatttaacccaatcagagagtg 25719152  T
Q  228 agttttaaagaaaatgtttaaaa 250  Q
    ||| ||| ||||| |||| ||||    
T  25719151 agtattagagaaattgttcaaaa 25719129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 51206085 - 51206187
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 227  Q
    ||||| |||||||||| |||||||||||||||| | |||||| |  |||||  ||||||||| ||||| ||| ||| |||||| | ||||||| ||||||    
T  51206085 cactcatttattagatgaaatcaatgtatgtcccatcactttatgtgagtttcattttcaaaatgtaggtcctacattgatttcacccaataaaagagtg 51206184  T
Q  228 agt 230  Q
    |||    
T  51206185 agt 51206187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 13520007 - 13520084
Alignment:
Q  145 aaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 222  Q
    ||||||||||||||| | ||||||||||  | ||||  ||| ||| ||||| | ||||||||||||||||||||||||    
T  13520007 aaaatcaatgtatgttccaccactttgtgcgggttctgtttccaatgtgtatacccacaatgatttaaaccaataaga 13520084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 18421968 - 18421878
Alignment:
Q  128 acactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    ||||| ||||||||||| |||||||||||||||| |||||| |||  | ||| |||||| ||||| |  ||  ||||||||||||||||||||    
T  18421968 acacttttttattagatgaaatcaatgtatgtcccaccactgtgt--gtgtttaatttttaaagtatgtatttacaatgatttaaaccaataa 18421878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 21776983 - 21776942
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccacttt 170  Q
    |||||||||||| |||||||||||||||||||| ||||||||    
T  21776983 cactcttttattggataaaatcaatgtatgtcctaccacttt 21776942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 217
Target Start/End: Complemental strand, 33996106 - 33995985
Alignment:
Q  96 caacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta 195  Q
    |||||||| ||||||||||| ||||   |  | ||||||||||||| || |||||||||||||||  |||||||| |  | |||||||||||||| | ||    
T  33996106 caacactctcttttcaacacactctctaacattcactcttttattaaatcaaatcaatgtatgtctcaccactttttgtgggttcaattttcaaaattta 33996007  T
Q  196 gatccacaatgatttaaaccaa 217  Q
     |  ||||||| ||||||||||    
T  33996006 aactcacaatggtttaaaccaa 33995985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 47237921 - 47237812
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||| ||| |||||||| ||||| ||||||||||  || |||  |||||||||||| ||| |||||||| ||||||| |||||||| ||  ||||  |||    
T  47237921 gaatgctatcaacactctcttttgaacactctctctagcatt--cactcttttattggatgaaatcaatatatgtcccaccactttatataagtttcatt 47237824  T
Q  185 ttcaaagtgtag 196  Q
    ||||||||||||    
T  47237823 ttcaaagtgtag 47237812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 30867070 - 30866999
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc 200  Q
    |||| ||||||| ||| |||| ||||||||||| |||||||| |  | |||| |||||||||||||||||||    
T  30867070 cacttttttattggattaaattaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagatcc 30866999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 50652470 - 50652375
Alignment:
Q  133 cttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    ||||||||  ||||||||||||||| ||  ||||||||||    |||||||||||||| ||||||   ||||| ||||||| |||||||| |||||    
T  50652470 cttttattgcataaaatcaatgtatatctcaccactttgtgtaggttcaattttcaaaatgtagacgtacaataatttaaatcaataagaaagtga 50652375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 228
Target Start/End: Complemental strand, 46536383 - 46536301
Alignment:
Q  146 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||| ||||||  ||||||||||    ||||||||||||||||||| | ||||| |  |||||| ||||||||||||||    
T  46536383 aaatcaatatatgtcataccactttgtgtatgttcaattttcaaagtgtaaacccacactattttaaagcaataagagagtga 46536301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 52279348 - 52279298
Alignment:
Q  178 ttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    ||||||||||||||| |||| ||||||||||||| | ||||| ||||||||    
T  52279348 ttcaattttcaaagtttagacccacaatgatttagatcaataggagagtga 52279298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 46287532 - 46287573
Alignment:
Q  178 ttcaattttcaaagtgtagatccacaatgatttaaaccaata 219  Q
    ||||||||||||||||| ||  ||||||||||||||||||||    
T  46287532 ttcaattttcaaagtgttgactcacaatgatttaaaccaata 46287573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 48608122 - 48608163
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccacttt 170  Q
    |||||||||||| |||||||| ||||||||||| ||||||||    
T  48608122 cactcttttattggataaaattaatgtatgtcccaccacttt 48608163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 9e-35; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 129 - 269
Target Start/End: Complemental strand, 32211922 - 32211786
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||||||||||| ||||||||||||||||||| |||||||  |||||||||||| || ||||||| ||||||||||||||||||||||||||||||    
T  32211922 cactcttttattagatgaaatcaatgtatgtccaactactttgtgtgagttcaatttttaaggtgtagacccacaatgatttaaaccaataagagagtga 32211823  T
Q  229 gttttaaagaaaatgtttaaaattaagagagtgttgctaat 269  Q
       ||||||||| |||| ||    |||||||||||||||||    
T  32211822 tcattaaagaaagtgttgaa----aagagagtgttgctaat 32211786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 41958085 - 41958226
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| |||| ||||||||||||||||||||||| || | |  ||||| |||||| ||| |||||||||||||||| |||| |||||  | ||||||||||    
T  41958085 gaatgctagtaacactcacttttcaacactctcaagcact--cactcatttattggatgaaatcaatgtatgtcccaccattttgtgggggttcaatttt 41958182  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||    
T  41958183 caaagtgtagacccacagtgatttaaaccaataagagagtgagt 41958226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 26980442 - 26980299
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| ||| |||||||||||||||||||||||||   ||   |||||| ||||| ||| |||||||||||||||| |||| |||||  ||||||||||||    
T  26980442 gaatgctaacaacactcacttttcaacactctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgtgtgagttcaatttt 26980343  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||| | || ||||||||||||||||| ||||||||||||||||    
T  26980342 caaaatatacatccacaatgatttaaatcaataagagagtgagt 26980299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 33193098 - 33193208
Alignment:
Q  135 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtttta 234  Q
    |||||| ||| |||||||||||||| | |||| ||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  33193098 tttattggatgaaatcaatgtatgtgccaccattttgtgagggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagaatgagtatta 33193197  T
Q  235 aagaaaatgtt 245  Q
     ||||| ||||    
T  33193198 gagaaagtgtt 33193208  T

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Target: chr1; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 30679049 - 30678948
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||| | | |||||||||||||||||||| ||||||||||  | |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  30679049 cactctttcaatggataaaatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtagactcacaatgatttaagccaataagagagtga 30678950  T
Q  229 gt 230  Q
    ||    
T  30678949 gt 30678948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 41948284 - 41948183
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||||||| |||||||||||||||| | | ||||||||||    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  41948284 cactcttttattggataaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgtaaatccacaatgatttaaatcaataagagagtga 41948185  T
Q  229 gt 230  Q
    ||    
T  41948184 gt 41948183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 19101739 - 19101638
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| ||||||||||||||||||  ||||||||||||||||||||| |||||    
T  19101739 cactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctattttcaaagtgtagatctgcaatgatttaaaccaataagaaagtga 19101640  T
Q  229 gt 230  Q
    ||    
T  19101639 gt 19101638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 2225226 - 2225367
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| |||| |||||||| ||||||||||||||||| |    |||||||||||| ||| |||||||||||||||| ||||||||||  | ||||  |||     
T  2225226 gaatgctagtaacactcaattttcaacactctctagcacc--cactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcggttta 2225323  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||| | ||| |||||||||||||||||| |||||||    
T  2225324 caaagtgtagaccgacagtgatttaaaccaataagaaagtgagt 2225367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 87 - 222
Target Start/End: Complemental strand, 6325990 - 6325858
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    ||||||||||||| ||||||||| ||||||||||| || |  ||||| ||||||| ||||||||||||||||||| |||| |||||  ||||||  ||||    
T  6325990 gaatactagcaacgctcacttttgaacactctctaataat--cactcatttattaaataaaatcaatgtatgtcccaccattttgtgtgagttc-ttttt 6325894  T
Q  187 caaagtgtagatccacaatgatttaaaccaataaga 222  Q
    ||||||||| | |||||||||| |||||||| ||||    
T  6325893 caaagtgtaaacccacaatgatgtaaaccaacaaga 6325858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 87 - 227
Target Start/End: Original strand, 11987626 - 11987766
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||||||| |||||||||||||||||||||||||   |  |  | || |||||| ||| |||| ||||||||| | ||||||| ||  | ||||||||||    
T  11987626 gaatactaacaacactcacttttcaacactctctccaacatttattcatttattggatgaaattaatgtatgttccaccacttagtgcgggttcaatttt 11987725  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtg 227  Q
    ||||||||||| |||||||||||||||||| ||||||||||    
T  11987726 caaagtgtagacccacaatgatttaaaccattaagagagtg 11987766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 1093211 - 1093118
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 222  Q
    ||||| |||||||||| |||||||||||||| | ||||||||||| |||||  |||| |||||||||| ||||||||||||||||| |||||||    
T  1093211 cactcgtttattagatgaaatcaatgtatgttccaccactttgtatgagttatatttccaaagtgtagttccacaatgatttaaactaataaga 1093118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 39499442 - 39499535
Alignment:
Q  135 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    ||||||||||||||||||||||||||  | |||||| |  |||||||||||||||| |||||||||||||||||||||  |||||||| |||||    
T  39499442 tttattagataaaatcaatgtatgtcatatcactttttgtgagttcaattttcaaaatgtagatccacaatgatttaattcaataagaaagtga 39499535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 87 - 268
Target Start/End: Complemental strand, 6133804 - 6133628
Alignment:
Q  87 gaatactagcaacactcacttttcaaca--ctctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||| |||||||||||||||||||||||  |||||||| | |  ||| |||||||| ||| |||||||| ||||||| ||||  ||||  | ||||||||    
T  6133804 gaatgctagcaacactcacttttcaacaatctctctagcact--cacccttttattggatgaaatcaatatatgtcccaccatattgtgtgggttcaatt 6133707  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaattaagagagtgttgctaa 268  Q
    |||||||| || | ||||||||| |||||||||||||||||||||| ||| |||  ||||| ||    ||||||||||||||||    
T  6133706 ttcaaagtctacacccacaatga-ttaaaccaataagagagtgagtattagagaggatgttcaa----aagagagtgttgctaa 6133628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 138 - 230
Target Start/End: Original strand, 8899065 - 8899157
Alignment:
Q  138 attagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||| |||| || |||||||| ||| ||||||  | |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  8899065 attagatgaaataaaggtatgtcccacccctttgtgtgggttcaattttcaaagtgtaggtccacaataatttaaaccaataagagagtgagt 8899157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 22540410 - 22540502
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataag 221  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| |||| |||||||||||||| ||||||||||||||||||||    
T  22540410 cactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaaccaataag 22540502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 10659889 - 10659808
Alignment:
Q  146 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 227  Q
    ||||||||| |||||| ||||||||||    ||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  10659889 aaatcaatggatgtccgaccactttgtgtaggttcaattttcaaagtgtagacccacgatgatttaaaccaataagagagtg 10659808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 93 - 230
Target Start/End: Complemental strand, 28218222 - 28218085
Alignment:
Q  93 tagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaa 190  Q
    |||||||||||| |||||||| ||||||  || |||  |||||||||||| ||| |||||||||||||||  ||||||||||  |  |||||||||||||    
T  28218222 tagcaacactcatttttcaaccctctctttagcatt--cactcttttattggatgaaatcaatgtatgtctcaccactttgtgtggattcaattttcaaa 28218125  T
Q  191 gtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||| ||||| | |||||||  ||||||| |||||||    
T  28218124 gtgtagaaccacagtaatttaaattaataagatagtgagt 28218085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 3872813 - 3872670
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||| |||||||||||||||||||||||||||||  || | |  ||||||| ||||| ||||| ||||| ||||||  ||||||||||    ||||||||    
T  3872813 gaatgctagcaacactcacttttcaacactctctctagcact--cactcttctattaaataaa-tcaatatatgtcacaccactttgtgtaggttcaatt 3872717  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtt 231  Q
    | ||||||||||| ||||||||||| |||||||||| |||| |||||    
T  3872716 tccaaagtgtagacccacaatgattcaaaccaataaaagagagagtt 3872670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 15523252 - 15523344
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataag 221  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| ||||  ||||||||||||| ||||||||||||||||||||    
T  15523252 cactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgatttaaaccaataag 15523344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 15531246 - 15531338
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataag 221  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| ||||  ||||||||||||| ||||||||||||||||||||    
T  15531246 cactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgatttaaaccaataag 15531338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 37553034 - 37552978
Alignment:
Q  182 attttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaaga 238  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  37553034 attttcaaagtgtagatccacaatgatttaaatcaataagagagtgagtattaaaga 37552978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 87 - 250
Target Start/End: Complemental strand, 8741405 - 8741240
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctct----agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaa 182  Q
    |||| ||||||||||||||||||||| |||||||    |||  |  |||| ||||||| ||| |||||||||||||||  || | |||||  | ||||||    
T  8741405 gaatgctagcaacactcacttttcaaaactctctctttagtggt--cacttttttattggatgaaatcaatgtatgtctcactaatttgtgtgggttcaa 8741308  T
Q  183 ttttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 250  Q
    |||||||||| || |  ||||||||||||||| ||||||||||||||| ||| ||||| |||| ||||    
T  8741307 ttttcaaagtataaacacacaatgatttaaactaataagagagtgagtattagagaaattgttcaaaa 8741240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 49730906 - 49730995
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaat 218  Q
    |||||||||||||||| |||  ||| ||||||  || |||||||  | ||||||||||||||||||||| ||||||||||||||||||||    
T  49730906 cactcttttattagattaaactaatatatgtcacactactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaat 49730995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 98 - 250
Target Start/End: Original strand, 51732290 - 51732440
Alignment:
Q  98 acactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtaga 197  Q
    |||||||||||||||| |||||||  |||  |||| ||||||| ||| |||| ||||||| | | || ||||| |  ||||| |||||||||||| || |    
T  51732290 acactcacttttcaacgctctctaacatt--cacttttttatttgatgaaattaatgtattttccactactttatgtgagtttaattttcaaagtataaa 51732387  T
Q  198 tccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 250  Q
     ||||||| |||||||||||||| ||||||||| ||| |||||| ||| ||||    
T  51732388 cccacaataatttaaaccaataaaagagtgagtattagagaaaacgttcaaaa 51732440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 31866361 - 31866466
Alignment:
Q  132 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtt 231  Q
    |||||| || ||| |||||||||||||||| || | ||| | |  |||||||||| |||||||| |||||||||||||||||| ||||||| |||||||     
T  31866361 tcttttgttggatgaaatcaatgtatgtcccactattttttgaaggttcaatttttaaagtgta-atccacaatgatttaaactaataagaaagtgagta 31866459  T
Q  232 ttaaaga 238  Q
    |||||||    
T  31866460 ttaaaga 31866466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 230
Target Start/End: Original strand, 33114020 - 33114114
Alignment:
Q  136 ttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||| | |||||| ||||||||| |||| ||| |    ||||||||||||||||||||||||| |||||||||||||||||| | |||||||    
T  33114020 ttattagtttaaatcattgtatgtcccaccattttatgtaggttcaattttcaaagtgtagatccagaatgatttaaaccaataaaaaagtgagt 33114114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 16948603 - 16948551
Alignment:
Q  193 gtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtt 245  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  16948603 gtagatccacaatgatttaaatcaataagagagtgagtattagagaaaatgtt 16948551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 29673522 - 29673618
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||| |||||||||||| ||||||| |||| |||||     |||||||||||||||||||| | ||||| |||||||||||||| | |||||||    
T  29673522 ttttattggataaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgtagaactacaattatttaaaccaataaaaaagtgagt 29673618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 37525571 - 37525667
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagag 225  Q
    |||||||| ||| ||||||| | |||||||| | |||| ||| |  | |||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  37525571 cactctttcattggataaaacccatgtatgttccaccattttatgtgggttcaattttcaaagtctagatctacaatgatttaaactaataagagag 37525667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 87 - 228
Target Start/End: Original strand, 931374 - 931515
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| |||||||||||||||||||||| || |||   ||   ||||||||||||  ||  || |||||||||||| | || ||| |  | ||||||||||    
T  931374 gaatgctagcaacactcacttttcaactctatctctaatactcactcttttattgaatggaagcaatgtatgtcccatcattttttgtgggttcaatttt 931473  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||| | || | |||||||||||||||||||||| |||||||    
T  931474 caaaatatacacccacaatgatttaaaccaataaaagagtga 931515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 15468262 - 15468359
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 226  Q
    ||||||||||||| ||| ||||||||||||||  |  |||||||  | |||||||||||| |||||||| ||||||| |||||||  ||||| |||||    
T  15468262 cactcttttattaaatagaatcaatgtatgtctcattactttgtgtgggttcaattttcatagtgtagacccacaataatttaaattaataaaagagt 15468359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 46335142 - 46335223
Alignment:
Q  132 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaa 213  Q
    ||||||||| ||| |||||||| ||| ||| |||||||||| ||||||  |||||||| || |||| |||||||||||||||    
T  46335142 tcttttattggatgaaatcaatctatatcctaccactttgtcagagttatattttcaatgtatagacccacaatgatttaaa 46335223  T

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Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 448 - 495
Target Start/End: Complemental strand, 1286232 - 1286185
Alignment:
Q  448 tatataaacacattagtagttgtgcattttttatctctgaaatataat 495  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  1286232 tatataaacacattagtggttgtacattatttatctctgaaatataat 1286185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 45179370 - 45179291
Alignment:
Q  143 ataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 222  Q
    ||||||||||||||||| | | |||||||| || ||||||||||||||||||| | ||||||| | |||||  |||||||    
T  45179370 ataaaatcaatgtatgttccatcactttgtgagggttcaattttcaaagtgtaaacccacaataacttaaattaataaga 45179291  T

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Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 13114808 - 13114706
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta-gatccacaatgatttaaaccaataagagagtg 227  Q
    ||||||||||||||||||||||||| ||||||| |||||||| || |  ||| |||| |||| ||||  | ||||| |||||||| ||||| ||| ||||    
T  13114808 cactcttttattagataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtataacccacattgatttaacccaatgagatagtg 13114709  T
Q  228 agt 230  Q
    |||    
T  13114708 agt 13114706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 41918037 - 41918139
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 227  Q
    |||||||||||| | | |||||||||||||||| |||||||| |  |  ||| ||||||||||||||| ||| ||| |||||| | ||||||| ||||||    
T  41918037 cactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggattccattttcaaagtgtaggtcctacattgattttacccaataaaagagtg 41918136  T
Q  228 agt 230  Q
    |||    
T  41918137 agt 41918139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 15928597 - 15928698
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||||||| |||  |||  |||||||||  |||| |||||  |||||| |||||||| |||||||   ||| |||||||||||||||| |||||||    
T  15928597 cactcttttatttgatggaattcatgtatgtctcaccattttgtgtgagttctattttcaaggtgtagacttacagtgatttaaaccaataaaagagtga 15928696  T
Q  229 gt 230  Q
    ||    
T  15928697 gt 15928698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 15906458 - 15906573
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtttt 233  Q
    |||||||  |||||||||||||||||||| | |||||||  ||  ||||||| |||| |||||||  ||||||||||||| ||||||  || ||||| ||    
T  15906458 ttttattgcataaaatcaatgtatgtccatc-actttgtgtgaactcaatttacaaaatgtagatttacaatgatttaaatcaataaacgaatgagtatt 15906556  T
Q  234 aaagaaaatgtttaaaa 250  Q
    | ||| |||||| ||||    
T  15906557 agagataatgttaaaaa 15906573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 29418523 - 29418615
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataa 220  Q
    |||||||||||| |||||||| ||||||| ||  |||||||| |  |||||| |||| |||||||||||||| ||| |||||| | |||||||    
T  29418523 cactcttttattggataaaattaatgtatatctcaccactttatgtgagttctatttccaaagtgtagatcctacattgatttcacccaataa 29418615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 224
Target Start/End: Original strand, 35336871 - 35336997
Alignment:
Q  92 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 191  Q
    |||||||||||||||||||||||  |||||| | |  || | ||||||| ||| |||||||||| |     ||||||||||  | |||||||||||  |     
T  35336871 ctagcaacactcacttttcaacatcctctagcact--cattattttattggatgaaatcaatgtctc----accactttgtgtgggttcaattttcttaa 35336964  T
Q  192 tgtagatccacaatgatttaaaccaataagaga 224  Q
    ||||||  |||||||||||||||||||||||||    
T  35336965 tgtagacacacaatgatttaaaccaataagaga 35336997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 39974326 - 39974237
Alignment:
Q  135 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||| ||||||||| |||| | |||| |||||| | ||||||      ||||| ||||  ||||||||||||||||||||||||||||||    
T  39974326 tttattagatgaaatcaatggatgttccaccattttgtatgggttcaa------aagtgcagatttacaatgatttaaaccaataagagagtgagt 39974237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 12767420 - 12767365
Alignment:
Q  175 gagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||| ||||| ||||||||||  || |||||||||||||||||| |||||||||    
T  12767420 gagttctatttttaaagtgtagactcataatgatttaaaccaataaaagagtgagt 12767365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 15906632 - 15906679
Alignment:
Q  179 tcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 226  Q
    ||||||||||||||||||||| ||||| |||||||  |||||||||||    
T  15906632 tcaattttcaaagtgtagatctacaataatttaaattaataagagagt 15906679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 44272008 - 44272051
Alignment:
Q  177 gttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||    
T  44272008 gttcaattttcaaagtgtagaacaacaatgatttaaatcaataa 44272051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 50539166 - 50539257
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    |||||||||||| ||| ||||||| |||||| | |||||||| |  | |||||||||||  ||||||||  | ||||||||||||| |||||    
T  50539166 cactcttttattggatgaaatcaaagtatgttccaccactttatgtgggttcaattttctcagtgtagacacgcaatgatttaaactaataa 50539257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 11135781 - 11135883
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 227  Q
    |||| ||||||| | | |||||||||||||||| |||||||| |  | |||| |||| |||||||||| ||| ||| |||||| | ||||||| ||||||    
T  11135781 cactattttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaagagtg 11135880  T
Q  228 agt 230  Q
    |||    
T  11135881 agt 11135883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 15660935 - 15660976
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccacttt 170  Q
    |||||||||||| ||||||||||||| |||||| ||||||||    
T  15660935 cactcttttattggataaaatcaatgcatgtcccaccacttt 15660976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 27570293 - 27570366
Alignment:
Q  155 tatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    ||||||| |||| |||||  ||||| |||||| |||||||| | |||||||||||| ||| ||||||| |||||    
T  27570293 tatgtcccaccaatttgtgtgagtttaatttttaaagtgtaaacccacaatgatttgaactaataagaaagtga 27570366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 33114039 - 33113990
Alignment:
Q  201 acaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 250  Q
    |||||||||||||| ||||||| ||||||| ||||||||| | |||||||    
T  33114039 acaatgatttaaactaataagaaagtgagtattaaagaaagtatttaaaa 33113990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 47644387 - 47644334
Alignment:
Q  177 gttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||| |||||||| ||||| | ||||||||||||||| ||||||||||| ||||    
T  47644387 gttctattttcaatgtgtaaacccacaatgatttaaatcaataagagagcgagt 47644334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 129 - 250
Target Start/End: Original strand, 44274276 - 44274397
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||| ||| |||||||||||||||||||| ||||||||||  | |||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  44274276 cactctttcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaactttcaaagtgtagatccacaatgatttaaaccaataacagagtga 44274375  T
Q  229 gttttaaagaaaatgtttaaaa 250  Q
    || ||| ||| ||| |||||||    
T  44274376 gtgttagagagaatatttaaaa 44274397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 9470123 - 9470222
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||  | ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9470123 cactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtga 9470222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 26767941 - 26767798
Alignment:
Q  87 gaatactagcaacactcacttttcaaca--ctctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||| |||||||||||||||||||||||  |||||||| | ||||  ||||||| | ||| |||||||||||||||| |||||||||| || ||||||||    
T  26767941 gaatgctagcaacactcacttttcaacattctctctagcacttac--tcttttactggatgaaatcaatgtatgtcccaccactttgtgagggttcaatt 26767844  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||| ||||||  ||||||||||||||||||||| |||||||||    
T  26767843 ttcaaattgtagactcacaatgatttaaaccaataaaagagtgagt 26767798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 6980295 - 6980137
Alignment:
Q  92 ctagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaa 189  Q
    ||||||||| |||||||||||||||||||  || | |  |||||||||||| ||| ||||||| |||||| | ||||||||||  |||||||||||||||    
T  6980295 ctagcaacattcacttttcaacactctctctagcact--cactcttttattggatgaaatcaaggtatgttctaccactttgtgtgagttcaattttcaa 6980198  T
Q  190 agtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 250  Q
    ||| |||| |||||||||||| ||| ||||||||||||||| ||| ||||| |||| ||||    
T  6980197 agtatagacccacaatgatttcaactaataagagagtgagtattagagaaagtgttcaaaa 6980137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 12989191 - 12989334
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| |||||||||||||||||||||||||||||        |||||||| ||| ||| |||||||||||||||| ||||||||||| |  ||| ||||     
T  12989191 gaatgctagcaacactcacttttcaacactctctttctcactcactctttcattggatgaaatcaatgtatgtcccaccactttgtatggattctatttc 12989290  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    | ||||||||| ||||||||||||||||||||||||||||||||    
T  12989291 cgaagtgtagacccacaatgatttaaaccaataagagagtgagt 12989334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 45554567 - 45554722
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||| |||||||||||||||||||||||||||||  || | |  |||||||||||| ||| |||||||||||||||| |||||||||        |||||    
T  45554567 gaatgctagcaacactcacttttcaacactctctctagcact--cactcttttattggatgaaatcaatgtatgtcccaccactttg--------caatt 45554656  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 250  Q
    ||| ||||||||| |||||||||||||||||||||||| ||||||| ||| ||| |||||| ||||    
T  45554657 ttccaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagagagaatgttcaaaa 45554722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 25238411 - 25238294
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactt-tgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttt 232  Q
    |||||||||||||||||||||||||||  | ||||| | |  | |||| ||||||||||||||||||||||||||||||||||||||| | |||||||      
T  25238411 ttttattagataaaatcaatgtatgtctcatcacttctttgtgggttctattttcaaagtgtagatccacaatgatttaaaccaataaaaaagtgagtgc 25238312  T
Q  233 taaagaaaatgtttaaaa 250  Q
    || ||||| |||||||||    
T  25238311 tagagaaagtgtttaaaa 25238294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 93 - 242
Target Start/End: Complemental strand, 34142313 - 34142164
Alignment:
Q  93 tagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagt 192  Q
    |||||||||| ||||||||||| |||||   |  | |||| ||||||| ||| ||||  |||||||||  || |||||||  | ||||||||||||||||    
T  34142313 tagcaacacttacttttcaacaatctctcaaacattcacttttttattggatgaaattcatgtatgtctcactactttgtgtgggttcaattttcaaagt 34142214  T
Q  193 gtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaat 242  Q
    |||||  ||||||| ||||||||||||||||||||| | |||||||||||    
T  34142213 gtagagtcacaatggtttaaaccaataagagagtgaatattaaagaaaat 34142164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 7919382 - 7919311
Alignment:
Q  155 tatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 226  Q
    ||||||| ||||||||||  |  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7919382 tatgtcccaccactttgtgtggattcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 7919311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 19639135 - 19639234
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||| ||||||||||| |||||||||||||||  | ||| | ||  ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  19639135 cactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgcagacctacaatgatttaaaccaataagagagtga 19639234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 19837728 - 19837827
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||| ||||||||||| |||||||||||||||  | ||| | ||  ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  19837728 cactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgcagacctacaatgatttaaaccaataagagagtga 19837827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 97 - 230
Target Start/End: Complemental strand, 35316569 - 35316438
Alignment:
Q  97 aacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 196  Q
    |||||| | ||||||||| |||||| || |  ||||||||||||||||||||| ||||||||||| |||| ||| |     ||||||||| ||| |||||    
T  35316569 aacacttatttttcaacattctctattact--cactcttttattagataaaattaatgtatgtcccaccattttatgttgattcaatttttaaattgtag 35316472  T
Q  197 atccacaatgatttaaaccaataagagagtgagt 230  Q
    | ||||||||||||||| ||||||||||||||||    
T  35316471 acccacaatgatttaaatcaataagagagtgagt 35316438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 2476546 - 2476644
Alignment:
Q  97 aacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 196  Q
    |||||||||||||||||| ||||||| | ||||  |||||||||||||||||||||||||||||| || |||||||   | ||||||||||||| |||||    
T  2476546 aacactcacttttcaacattctctagcacttac--tcttttattagataaaatcaatgtatgtcccactactttgtgtaacttcaattttcaaaatgtag 2476643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 11539465 - 11539569
Alignment:
Q  129 cactcttttattagataaaatcaat--gtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaa-tgatttaaaccaataagagag 225  Q
    |||||||||||| ||| ||||||||  |||||| | | ||||||||  |||||| |||||||||||||||||||| || |||||||||||||||||||||    
T  11539465 cactcttttattggatgaaatcaatatgtatgttccatcactttgtgtgagttctattttcaaagtgtagatccagaattgatttaaaccaataagagag 11539564  T
Q  226 tgagt 230  Q
    |||||    
T  11539565 tgagt 11539569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 12099000 - 12098895
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccac-aatgatttaaaccaataagagagtgagttt 232  Q
    ||||||| ||| ||||||| |||||||   |||||||||| ||||||||||||||||||||| |  ||| |||||||||||| ||||||||||||||| |    
T  12099000 ttttatttgatgaaatcaaagtatgtctcgccactttgtatgagttcaattttcaaagtgtaaactcacaaatgatttaaactaataagagagtgagtat 12098901  T
Q  233 taaaga 238  Q
    ||||||    
T  12098900 taaaga 12098895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 38464222 - 38464302
Alignment:
Q  146 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 226  Q
    |||||||||||||||  | |||||||   | ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  38464222 aaatcaatgtatgtctcatcactttgcgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagt 38464302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 10981582 - 10981661
Alignment:
Q  151 aatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||| ||||||||||  | |||| |||| ||| ||||||| ||||||||||||||||||||||||||||||||    
T  10981582 aatgtatgtcccaccactttgtgtgggttctatttccaatgtgtagacccacaatgatttaaaccaataagagagtgagt 10981661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 87 - 221
Target Start/End: Complemental strand, 18511389 - 18511255
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattt 185  Q
    |||| |||||||||||||||||| ||||||||| | |||    |||||||||||| |||||||||||||||||||| || | ||| |  | |||||||||    
T  18511389 gaatgctagcaacactcactttttaacactctc-actatcactcactcttttattggataaaatcaatgtatgtcccactattttatgtgggttcaattt 18511291  T
Q  186 tcaaagtgtagatccacaatgatttaaaccaataag 221  Q
    |||||||| ||| | |||||| ||||||||||||||    
T  18511290 tcaaagtgaagacctacaatgttttaaaccaataag 18511255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 472264 - 472192
Alignment:
Q  166 actttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaaga 238  Q
    |||||||  |||||||||||||||| | || ||||||||||||||||||||||||||||| |||| |||||||    
T  472264 actttgtgtgagttcaattttcaaaatatatatccacaatgatttaaaccaataagagagcgagtattaaaga 472192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 16719605 - 16719447
Alignment:
Q  92 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 191  Q
    ||||||||||||||||||||||||| |||       | ||||||||||||||| |||||||||||| ||| |||| ||  |    ||||||||||||||     
T  16719605 ctagcaacactcacttttcaacactgtctttagcacatactcttttattagatgaaatcaatgtatatcccaccatttcatgtaggttcaattttcaaaa 16719506  T
Q  192 tgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 250  Q
    |||||| || ||||||||||||||||||  | | ||||| ||||| |||||||| ||||    
T  16719505 tgtagacccgcaatgatttaaaccaatacaaaaatgagtattaaacaaaatgttaaaaa 16719447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 236
Target Start/End: Original strand, 30849284 - 30849386
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtttt 233  Q
    ||||||||||| ||||||||||| |||| |||| |||||| | |||| ||||| ||||  || ||||||||||||||||| |||||||| |||| || ||    
T  30849284 ttttattagatgaaatcaatgtacgtcccaccaatttgtatgggttctatttttaaaggataaatccacaatgatttaaatcaataagaaagtgcgtatt 30849383  T
Q  234 aaa 236  Q
    |||    
T  30849384 aaa 30849386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 220
Target Start/End: Original strand, 32701513 - 32701603
Alignment:
Q  130 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    ||||||||||| |||||||||||||||| ||| |||||||| |    |||||||||| || ||||| ||||| ||||||||||||||||||    
T  32701513 actcttttattggataaaatcaatgtatatcccaccactttatgtatgttcaatttttaacgtgtaaatccataatgatttaaaccaataa 32701603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 37652378 - 37652292
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    ||||||||||| |||||||||||||| | ||| ||||||    ||||||||| ||| |||||||| |||||||||||||||||||||    
T  37652378 ttttattagatgaaatcaatgtatgttccacccctttgtgtatgttcaatttccaacgtgtagattcacaatgatttaaaccaataa 37652292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 17188076 - 17188198
Alignment:
Q  96 caacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta 195  Q
    |||||||||||||||||| |||||||  | |  |||| ||||||| ||| |||||||||| | ||  ||||||||||  ||  |||||||||||||||||    
T  17188076 caacactcacttttcaactctctctatcact--cactattttattggatgaaatcaatgtgtatctcaccactttgtgtgaactcaattttcaaagtgta 17188173  T
Q  196 gatccacaatgatttaaaccaataa 220  Q
    |  ||| ||||||||||||||||||    
T  17188174 ggcccagaatgatttaaaccaataa 17188198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 32856319 - 32856172
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctct--agtatttac--actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaa 182  Q
    |||| ||| |||||||||||||| ||||||||||  ||||   ||  ||||||||||  ||| |||| ||| |||||   ||||||||||  | ||| ||    
T  32856319 gaatgctaacaacactcacttttgaacactctctccagtacgcactgactcttttatcggatgaaattaatatatgtttcaccactttgtgtgggttgaa 32856220  T
Q  183 ttttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||||||||||| | |||||||||||||||||||| |||||    
T  32856219 ttttcaaagtgtagatccatagtgatttaaaccaataagagattgagt 32856172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 230
Target Start/End: Complemental strand, 36472008 - 36471875
Alignment:
Q  97 aacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 196  Q
    ||||||||||||||||||||||||   |    || ||| ||||| ||| ||||||| |||||||  |||||||| || |  ||||||||||||| ||||     
T  36472008 aacactcacttttcaacactctctctgacactcaatctcttattggatgaaatcaaagtatgtctcaccactttttatggattcaattttcaaaatgtaa 36471909  T
Q  197 atccacaatgatttaaaccaataagagagtgagt 230  Q
    |  ||||||||||||||||||||| |||||||||    
T  36471908 actcacaatgatttaaaccaataaaagagtgagt 36471875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 4552925 - 4552877
Alignment:
Q  182 attttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  4552925 attttcaatgtgtagacccacaatgatttaaaccaataagagagtgagt 4552877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 453 - 556
Target Start/End: Complemental strand, 25476432 - 25476329
Alignment:
Q  453 aaacacattagtagttgtgcattttttatctctgaaatataatgtttagttttcacgtggcatcagagctcctgatcttggggggtcttgtttccgcata 552  Q
    |||||||||||| |||||  ||| ||||||| ||||||||||| || ||||||||| ||||||||||||||  ||||    |||| |||| |||||||||    
T  25476432 aaacacattagtggttgtaaattatttatctttgaaatataatcttcagttttcacatggcatcagagctctcgatcactaggggccttgcttccgcata 25476333  T
Q  553 aacc 556  Q
    ||||    
T  25476332 aacc 25476329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 14489626 - 14489564
Alignment:
Q  180 caattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaat 242  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||| ||||| ||| |||||||    
T  14489626 caatttttaaagtgtagatccacaataatttaaaccaataaaagaatgagtattagagaaaat 14489564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 15884498 - 15884564
Alignment:
Q  156 atgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 222  Q
    |||||| ||||||||||  | |||||||||||||| |||||| ||||||| ||||||||||||||||    
T  15884498 atgtcccaccactttgtgtgggttcaattttcaaaatgtagacccacaattatttaaaccaataaga 15884564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 448 - 521
Target Start/End: Original strand, 17508848 - 17508921
Alignment:
Q  448 tatataaacacattagtagttgtgcattttttatctctgaaatataatgtttagttttcacgtggcatcagagc 521  Q
    ||||||||||||||||| ||||| |||| ||||| ||||||||||||| || | ||||||| ||| ||||||||    
T  17508848 tatataaacacattagtggttgtacattatttatttctgaaatataatattcaattttcacatggtatcagagc 17508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 43414402 - 43414498
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||| ||| |||||||||||||| | |||| ||||    ||| | ||||||| ||| |||||||||||||||||||||||| ||||| ||||||    
T  43414402 ttttattggatgaaatcaatgtatgttctaccattttgcgtaagtgctattttcagagtatagatccacaatgatttaaaccaagaagagggtgagt 43414498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 28898175 - 28898073
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 227  Q
    |||||||||||| | | |||||||||||||||| |||||||| |  | |||  |||| |||||||||||||| ||| |||||| | ||||||| ||||||    
T  28898175 cactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaagtgtagatcctacattgatttcatccaataaaagagtg 28898076  T
Q  228 agt 230  Q
    |||    
T  28898075 agt 28898073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 2816613 - 2816572
Alignment:
Q  23 attgaatatgcaaaacttggaccaagaaagatcaaagatcca 64  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  2816613 attgaatatgcaaaacttggaccaacaaagatcaaagctcca 2816572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 41805914 - 41805873
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccacttt 170  Q
    |||||||||||| |||||||||||||||||||| ||||||||    
T  41805914 cactcttttattggataaaatcaatgtatgtcccaccacttt 41805873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 230
Target Start/End: Complemental strand, 24895440 - 24895303
Alignment:
Q  92 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 191  Q
    |||||||||||| |||||  ||| |||||| || |  |||||||||| | |||||||||||||||| | | |||| ||| |  |||||| |||| |||||    
T  24895440 ctagcaacactctcttttggacagtctctaatact--cactcttttaatggataaaatcaatgtatattccaccattttatgtgagttccatttccaaag 24895343  T
Q  192 tgta-gatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||| || ||||| |||||||| ||||| | |||||||||    
T  24895342 tgtatgacccacattgatttaacccaatgaaagagtgagt 24895303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 25730506 - 25730456
Alignment:
Q  200 cacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 250  Q
    |||| |||||||||||||||| ||||||| | ||||| |||||||||||||    
T  25730506 cacagtgatttaaaccaataaaagagtgaatattaaaaaaaatgtttaaaa 25730456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 30718412 - 30718374
Alignment:
Q  182 attttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  30718412 attttcaaagtgtagactcacaatgatttaaaccaataa 30718374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 42182931 - 42183029
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagt 226  Q
    |||||||||||| | | |||||||||||||||| |||||||| |  | |||| |||| |||||||||| ||| ||| |||||| | ||||||| |||||    
T  42182931 cactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaagagt 42183029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 448 - 508
Target Start/End: Original strand, 38500219 - 38500282
Alignment:
Q  448 tatataaacacattagtagttgtgcattttttatc---tctgaaatataatgtttagttttcac 508  Q
    ||||||||||||||||| ||||| |||| ||||||   ||||||||||||| || |||||||||    
T  38500219 tatataaacacattagtggttgtacattatttatctcgtctgaaatataatattcagttttcac 38500282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 9e-32; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 85 - 230
Target Start/End: Original strand, 46517291 - 46517434
Alignment:
Q  85 atgaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||||| |||||||||||||||||| |||||||||||| | |  ||||| |||||| |||||||||||||||| ||| |||| | |||  | ||||||||    
T  46517291 atgaatgctagcaacactcactttttaacactctctagcact--cactcatttattggataaaatcaatgtatatcccaccattctgtgggggttcaatt 46517388  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||||||  ||||||||||||||||||||||||| |||||    
T  46517389 ttcaaagtgtagactcacaatgatttaaaccaataagagaatgagt 46517434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 142 - 230
Target Start/End: Original strand, 27888337 - 27888425
Alignment:
Q  142 gataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||||||||||||| ||||||||||  | |||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  27888337 gataaaatcaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtgagt 27888425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 87 - 227
Target Start/End: Complemental strand, 31502644 - 31502504
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| ||||||||||||||||||||||| |||||   |    |||||||||||| ||| ||||||| |||||||| |||| |||||  | ||||||||||    
T  31502644 gaatgctagcaacactcacttttcaacagtctctctaacactcactcttttattggatgaaatcaaggtatgtcccaccattttgtgtgcgttcaatttt 31502545  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtg 227  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  31502544 caaagtgtagactcacaatgatttaaaccaataagagagtg 31502504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 32205079 - 32205219
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| |||||||||||||||||| ||||||||||  || |  |||||||||||| ||| |||||||||||||||| |||| |||||  | ||||||||||    
T  32205079 gaatgctagcaacactcacttttgaacactctctc-tact--cactcttttattggatgaaatcaatgtatgtcctaccattttgtgtgggttcaatttt 32205175  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
     ||||| ||| || |||||||||||||| |||||||||||||||    
T  32205176 taaagtataggtctacaatgatttaaactaataagagagtgagt 32205219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 22189939 - 22190082
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||| |||| |||||||| |||||||||||||||  || | |  |||||||||||| ||| ||||||||||||| || ||||||||||  | ||||||||    
T  22189939 gaatgctagaaacactcatttttcaacactctctctagcact--cactcttttattggatgaaatcaatgtatggcccaccactttgtgtgggttcaatt 22190036  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||||| || |||||||||||||||||||  ||||||||    
T  22190037 ttcaaagtgtagacccgcaatgatttaaaccaataaacgagtgagt 22190082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 97 - 238
Target Start/End: Original strand, 7459353 - 7459494
Alignment:
Q  97 aacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 196  Q
    ||||||||||||| |||| ||||||  ||   || ||||||||| |||||||||||||||| | | |||||||| |  ||| |||||||||||| | |||    
T  7459353 aacactcactttttaacattctctataatactcattcttttattcgataaaatcaatgtatattccaccactttatgtgagctcaattttcaaaatatag 7459452  T
Q  197 atccacaatgatttaaaccaataagagagtgagttttaaaga 238  Q
    ||||||||| |||||||||||||| ||||||||| |||||||    
T  7459453 atccacaataatttaaaccaataaaagagtgagtattaaaga 7459494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 134 - 268
Target Start/End: Complemental strand, 25686968 - 25686838
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtttt 233  Q
    ||||||| ||| |||||||||||||||  |||||||| || | ||||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||    
T  25686968 ttttatttgatgaaatcaatgtatgtcataccactttttatgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagataatgagtatt 25686869  T
Q  234 aaagaaaatgtttaaaattaagagagtgttgctaa 268  Q
    | | | |||||| ||    ||||||||||||||||    
T  25686868 agaaagaatgttcaa----aagagagtgttgctaa 25686838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 87 - 235
Target Start/End: Original strand, 33008104 - 33008252
Alignment:
Q  87 gaatactagcaacactcacttttcaacact--ctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||| |||||||||||||||||| ||||||  |||||| | |  |||||||||||| ||| |||||| ||||||||| ||||||||||  | |||| |||    
T  33008104 gaatgctagcaacactcacttttgaacactatctctagcact--cactcttttattggatgaaatcattgtatgtcccaccactttgtgtgggttctatt 33008201  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaa 235  Q
    | ||| ||||||| |||||||||||||||||||||| |||| |||| ||||    
T  33008202 tccaatgtgtagacccacaatgatttaaaccaataaaagagagagtattaa 33008252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 7775042 - 7775140
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||  |||||||||||||||||||| || ||| |||||||||||| |||||| ||||||    
T  7775042 cactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtgtgga-ccagaatgatttaaacaaataagtgagtga 7775140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 92 - 230
Target Start/End: Complemental strand, 12263611 - 12263473
Alignment:
Q  92 ctagcaacactcacttttcaacactctctagtatt-tacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaa 190  Q
    ||||||||||| |||||||||||||||||  |||  | |||||||||||  |||  ||||||||||||||| | ||||||||    | ||||||||||||    
T  12263611 ctagcaacacttacttttcaacactctctc-tatcatccactcttttatcggatggaatcaatgtatgtcccatcactttgtgtaggatcaattttcaaa 12263513  T
Q  191 gtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  12263512 gtgtagacccacaatgatttaaaccaataagatagtgagt 12263473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 27949282 - 27949416
Alignment:
Q  96 caacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta 195  Q
    |||||||||||||| ||||||||||   |    ||||||| |||| ||| |||||||  ||||||| |||| |||||  |||||||| ||||||||||||    
T  27949282 caacactcactttttaacactctctctaacactcactcttgtattggatgaaatcaagttatgtcctaccattttgtgtgagttcaaatttcaaagtgta 27949381  T
Q  196 gatccacaatgatttaaaccaataagagagtgagt 230  Q
    || |||||||||||||||| |||||||||||||||    
T  27949382 gacccacaatgatttaaactaataagagagtgagt 27949416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 6442224 - 6442316
Alignment:
Q  146 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaaga 238  Q
    |||||||||||||| | |||| |||||  |  |||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  6442224 aaatcaatgtatgttccaccattttgtggggattcaattttcaaagtgtagacccacaatgatttaaaccaataaaagagtgagtattaaaga 6442316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 14795131 - 14795274
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattt 185  Q
    |||| |||||||||||||||||||||||||||||  |||    |||| ||||||| ||| |||||||||||||||| |||| ||| |    |||||||||    
T  14795131 gaatgctagcaacactcacttttcaacactctctc-tatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaattt 14795229  T
Q  186 tcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    | |||||||| ||||| |||||||||||| |||||||||||||||    
T  14795230 ttaaagtgtatatccataatgatttaaactaataagagagtgagt 14795274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 15242123 - 15242266
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattt 185  Q
    |||| |||||||||||||||||||||||||||||  |||    |||| ||||||| ||| |||||||||||||||| |||| ||| |    |||||||||    
T  15242123 gaatgctagcaacactcacttttcaacactctctc-tatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaattt 15242221  T
Q  186 tcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    | |||||||| ||||| |||||||||||| |||||||||||||||    
T  15242222 ttaaagtgtatatccataatgatttaaactaataagagagtgagt 15242266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 132 - 230
Target Start/End: Complemental strand, 32213004 - 32212907
Alignment:
Q  132 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||| ||| |||||||||||||||  || |||||||| | |||||||||| ||| |||||  ||||||||||||||||||||||||||||||||    
T  32213004 tcttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtagc-ccacaatgatttaaaccaataagagagtgagt 32212907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 11692221 - 11692322
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||    ||||||||||||||||||| |  |||| |||||||||| |||| ||||||||    
T  11692221 cactcttttattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgtaaactcacagtgatttaaactaatatgagagtga 11692320  T
Q  229 gt 230  Q
    ||    
T  11692321 gt 11692322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 11824113 - 11824214
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||||||| ||| |||||||||||||||| |||| |||||     |||||||||||||||||| | ||||||||||||||| |||||||| |||||    
T  11824113 cactcttttattggatgaaatcaatgtatgtcccaccattttgtgtagcttcaattttcaaagtgtaaacccacaatgatttaaatcaataagaaagtga 11824212  T
Q  229 gt 230  Q
    ||    
T  11824213 gt 11824214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 48374617 - 48374476
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| |||||||||||||||||| |||||||||||||| |  ||||||||||||  ||  |||  ||| |||||| |||||||| || | |||| ||||     
T  48374617 gaatgctagcaacactcacttttgaacactctctagtact--cactcttttattgaatggaattcatgcatgtcccaccactttctatgggttctatttc 48374520  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||| |  |||||| ||||||||||| ||||||||||||    
T  48374519 caaagtgtatactcacaataatttaaaccaacaagagagtgagt 48374476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 23564159 - 23564076
Alignment:
Q  143 ataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 226  Q
    ||||||| ||||||||||  ||||||||||| |||||| |||||||||||||||||||||  | |||||||||||||| |||||    
T  23564159 ataaaattaatgtatgtcgcaccactttgtatgagttctattttcaaagtgtagatccactgtaatttaaaccaataaaagagt 23564076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 93 - 230
Target Start/End: Complemental strand, 19423008 - 19422871
Alignment:
Q  93 tagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 191  Q
    ||||||||||||||||||||||||||||  |||    |||||||| ||| ||| |||||||||||||||| ||| | |||||      | |||||| |||    
T  19423008 tagcaacactcacttttcaacactctctc-tatcactcactctttcattggatgaaatcaatgtatgtcccaccccattgtattgtcactattttcgaag 19422910  T
Q  192 tgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  19422909 tgtagatccacaatgatttaaaccaataaaagagtgagt 19422871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 92 - 238
Target Start/End: Original strand, 39254088 - 39254234
Alignment:
Q  92 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 191  Q
    ||||||||| ||||||||||||| ||||||       ||||||||||||  ||||||| |||||||||   ||||||||||    |||||||||| |||     
T  39254088 ctagcaacattcacttttcaacattctctatagcactcactcttttattgaataaaattaatgtatgtttcaccactttgtgttggttcaatttttaaaa 39254187  T
Q  192 tgtagatccacaatgatttaaaccaataagagagtgagttttaaaga 238  Q
    |||||| ||||||| ||||||| |||||||||||||||| |||||||    
T  39254188 tgtagacccacaataatttaaatcaataagagagtgagtgttaaaga 39254234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 32178966 - 32178843
Alignment:
Q  102 tcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcca 201  Q
    ||||||||||||||||||||| | ||||  | ||||||| ||| |||| ||||||||| | |||||| |||   | |||||||||||||||||| |  ||    
T  32178966 tcacttttcaacactctctagcacttac--tattttattggatgaaattaatgtatgttccaccactctgtttta-ttcaattttcaaagtgtatacaca 32178870  T
Q  202 caatgatttaaaccaataagagagtga 228  Q
    |||||||||||| ||||||||||||||    
T  32178869 caatgatttaaatcaataagagagtga 32178843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 39364420 - 39364335
Alignment:
Q  472 cattttttatctctgaaatataatgtttagttttcacgtggcatcagagctcctgatcttggggggtcttgtttccgcataaaccc 557  Q
    |||| ||||||| ||||||||||  || ||||||||| ||  ||||||||||||||||||| |||| |||| ||||||||||||||    
T  39364420 cattatttatctttgaaatataacattcagttttcacatgatatcagagctcctgatcttgaggggccttgcttccgcataaaccc 39364335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 44350940 - 44350839
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||| ||||||| ||| |||||||||||||||    ||||||||    |||||||||||||||||||||  |||||||||||||||||| || |||||||    
T  44350940 cacttttttattggatcaaatcaatgtatgtctcgtcactttgtttaggttcaattttcaaagtgtagactcacaatgatttaaaccaacaaaagagtga 44350841  T
Q  229 gt 230  Q
    ||    
T  44350840 gt 44350839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 10934100 - 10933996
Alignment:
Q  132 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtt 231  Q
    ||||||||| |||||||| ||| ||||||  ||||||||||| |  ||| |||| |||||| || | |||||||||||||||| ||||||||| |||||     
T  10934100 tcttttattggataaaattaatatatgtctcaccactttgtatggtttctatttccaaagtataaacccacaatgatttaaactaataagagattgagta 10934001  T
Q  232 ttaaa 236  Q
    |||||    
T  10934000 ttaaa 10933996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 12270988 - 12271096
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| ||||||||||  ||||||||||||||||||     | ||||||||||| |||| |||||||||||||||| ||||||||||  | |||| |||||    
T  12270988 gaatgctagcaacac--acttttcaacactctctatagcatccactcttttatcagatgaaatcaatgtatgtcccaccactttgtgtg-gttctatttt 12271084  T
Q  187 caaagtgtagat 198  Q
    ||||||||||||    
T  12271085 caaagtgtagat 12271096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 96 - 220
Target Start/End: Complemental strand, 25092832 - 25092708
Alignment:
Q  96 caacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta 195  Q
    |||||||||||||||||||||||||        |||||||| ||| |||  ||||||||||||||| || |||||||  ||||||||||||| |||| ||    
T  25092832 caacactcacttttcaacactctcttccgcacccactctttcatttgatgcaatcaatgtatgtcctactactttgtgtgagttcaattttctaagtata 25092733  T
Q  196 gatccacaatgatttaaaccaataa 220  Q
    ||  |||||| ||||||||||||||    
T  25092732 gacacacaataatttaaaccaataa 25092708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 24539261 - 24539159
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta-gatccacaatgatttaaaccaataagagagtg 227  Q
    |||||||||||| |||||||||||| ||||||| |||||||| || |  ||| |||| |||| |||| || ||||| |||||||| ||||| ||||||||    
T  24539261 cactcttttattggataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtatgacccacattgatttaacccaatgagagagtg 24539162  T
Q  228 agt 230  Q
    |||    
T  24539161 agt 24539159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 36845612 - 36845567
Alignment:
Q  177 gttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 222  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||    
T  36845612 gttcaattttcaaagtatagacccacaatgatttaaaccaataaga 36845567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 19494477 - 19494385
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataa 220  Q
    |||||||||||| | | |||||||||||||||| |||||||| |  | |||| ||||||||||||||||||| ||| |||||| | |||||||    
T  19494477 cactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagatcctacattgatttcacccaataa 19494385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 44511107 - 44510999
Alignment:
Q  96 caacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtg 193  Q
    ||||||| |||||||||||||||||  || | |  |||| ||||||| ||| |||||||||||||||  | ||||||||  | ||||||||||||| |||    
T  44511107 caacacttacttttcaacactctctctagcact--cacttttttattggatgaaatcaatgtatgtctcatcactttgtctgtgttcaattttcaatgtg 44511010  T
Q  194 tagatccacaa 204  Q
    |||||||||||    
T  44511009 tagatccacaa 44510999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 17749736 - 17749838
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta-gatccacaatgatttaaaccaataagagagtg 227  Q
    |||||||||||| |||||||||||| ||||||| |||||||| || |  ||  |||| |||| |||| || ||||| |||||||| ||||| ||||||||    
T  17749736 cactcttttattggataaaatcaatatatgtcccaccactttatatggatttcatttccaaaatgtatgacccacattgatttaacccaatgagagagtg 17749835  T
Q  228 agt 230  Q
    |||    
T  17749836 agt 17749838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 1316374 - 1316431
Alignment:
Q  188 aaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtt 245  Q
    |||||||| ||  |||||||||||||||||||| ||||||||| ||| ||||||||||    
T  1316374 aaagtgtacatttacaatgatttaaaccaataaaagagtgagtattagagaaaatgtt 1316431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 6580092 - 6580039
Alignment:
Q  177 gttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||||||| | | || ||||||| ||||||||||||||||||||||||    
T  6580092 gttcaattttcaaaatatggacccacaataatttaaaccaataagagagtgagt 6580039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 8073468 - 8073367
Alignment:
Q  87 gaatactagcaacactcacttttcaacactct--ctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    ||||||||| |||||||| ||||||||| |||  |||| | |  |||||||||||  ||| |||||||||||||||| ||||||||||   |||||||||    
T  8073468 gaatactagtaacactcatttttcaacattcttcctagcact--cactcttttatcggatgaaatcaatgtatgtcccaccactttgtgtaagttcaatt 8073371  T
Q  185 ttca 188  Q
    ||||    
T  8073370 ttca 8073367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 9648982 - 9649059
Alignment:
Q  145 aaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 222  Q
    ||||||||||||||| | ||||||||||  | ||||  ||| ||| ||||| | ||||||||||||||||||||||||    
T  9648982 aaaatcaatgtatgttccaccactttgtgcgggttctgtttccaatgtgtatacccacaatgatttaaaccaataaga 9649059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 36845566 - 36845530
Alignment:
Q  192 tgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||| ||||||||||||||||||||||||||||||    
T  36845566 tgtagacccacaatgatttaaaccaataagagagtga 36845530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 238
Target Start/End: Original strand, 12167319 - 12167358
Alignment:
Q  199 ccacaatgatttaaaccaataagagagtgagttttaaaga 238  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  12167319 ccacaatgatttaaaccaataagaaagtgagtattaaaga 12167358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 230
Target Start/End: Complemental strand, 17354662 - 17354563
Alignment:
Q  132 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||| ||| |||||||||||||||| |||||||| |  | |||| |||| |||||||||| ||| ||| |||||| | ||||||| | |||||||    
T  17354662 tcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttctatttccaaagtgtaggtcctacattgattttacccaataaaaaagtgagt 17354563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 1688048 - 1688126
Alignment:
Q  152 atgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||  ||||||||| | |||||  |||| ||||||||||| | |||| ||||||| ||||||| |||||||||    
T  1688048 atgtatgtctcaccactttgcatgagttttatttccaaagtgtagacctacaacgatttaacccaataaaagagtgagt 1688126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 25428617 - 25428515
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 227  Q
    ||||||||||||   | |||||||||||||||| |||||||| |  | |||  |||| |||||||||||||| ||| |||||| | ||||||| ||||||    
T  25428617 cactcttttattgtgtgaaatcaatgtatgtcccaccactttatgtgggttacatttccaaagtgtagatcctacattgattttatccaataaaagagtg 25428518  T
Q  228 agt 230  Q
    |||    
T  25428517 agt 25428515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 31874117 - 31874159
Alignment:
Q  188 aaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||  |||||||||||||||| ||||||||||||||    
T  31874117 aaagtgtagactcacaatgatttaaacctataagagagtgagt 31874159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 3855900 - 3855851
Alignment:
Q  177 gttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 226  Q
    ||||||||||||||||  ||| | |||||||||||||||||||| |||||    
T  3855900 gttcaattttcaaagttcagacctacaatgatttaaaccaataaaagagt 3855851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 13919839 - 13919924
Alignment:
Q  146 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||||||||| |||||||| |  | |||| ||||||||||||||| ||| ||| |||||| | |||||||  ||||||||    
T  13919839 aaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtaggtcctacattgatttcacccaataaatgagtgagt 13919924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 10142154 - 10142013
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| ||||||||||||| ||||||||||||| ||| | |  |||||||||||| |||||||||||||||||||| ||||||||||    |||| |||||    
T  10142154 gaatgctagcaacactcatttttcaacactctatagcact--cactcttttattggataaaatcaatgtatgtcccaccactttgtgttggttccatttt 10142057  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  10142056 caaagtgtagaccaacaattatttaaatcaataagagagtgagt 10142013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 28490902 - 28490759
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 184  Q
    |||| ||||||||| ||||||||||| |||||||  || |||  |||| ||||||| ||| ||||||| |||||||| ||||||||||   |||||||||    
T  28490902 gaatgctagcaacagtcacttttcaaaactctctctagcatt--cacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatt 28490805  T
Q  185 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    || |||||||||| ||||||| ||||||||||||||||||||||||    
T  28490804 ttgaaagtgtagacccacaataatttaaaccaataagagagtgagt 28490759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 39246657 - 39246750
Alignment:
Q  136 ttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgag 229  Q
    ||||| |||||||||||||||||||| ||||||||||  ||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||    
T  39246657 ttattggataaaatcaatgtatgtcccaccactttgtgtgagttcagttttcaaagtgtagacccacaatactttaaaccaataagagagtgag 39246750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 34368402 - 34368500
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 227  Q
    |||||||| ||| ||||||| |||||||||| | ||||||||||  | ||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  34368402 cactctttcattggataaaaccaatgtatgttccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgatttaaaccaataagagagtg 34368500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 5413875 - 5413774
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||  | ||||||||| ||||||||||| ||| |||||||||||||||||| | |||||    
T  5413875 cactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgtagacccataatgatttaaaccaataaaaaagtga 5413776  T
Q  229 gt 230  Q
    ||    
T  5413775 gt 5413774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 25710610 - 25710501
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    ||||||||||||   | |||||||||||||||| ||||||| ||| |||||| |||||||||||||||| ||||||| |||||||||||||||||| |||    
T  25710610 cactcttttattgtgtgaaatcaatgtatgtcctaccacttcgtatgagttctattttcaaagtgtagacccacaataatttaaaccaataagagaatga 25710511  T
Q  229 gttttaaaga 238  Q
     | |||||||    
T  25710510 atattaaaga 25710501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 93 - 228
Target Start/End: Complemental strand, 28090401 - 28090268
Alignment:
Q  93 tagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagt 192  Q
    |||||||||| | ||||||||||||||||  | ||||  | || ||||| || ||||||||  |||||| ||||||||||  ||||||||||||||||||    
T  28090401 tagcaacacttatttttcaacactctctatcacttac--tattatattatatgaaatcaattcatgtcccaccactttgtgtgagttcaattttcaaagt 28090304  T
Q  193 gtagatccacaatgatttaaaccaataagagagtga 228  Q
     |||||| |||||||||||||||||||| |||||||    
T  28090303 ttagatcaacaatgatttaaaccaataaaagagtga 28090268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 17537240 - 17537141
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||||||||| ||| |||||||||||||||| |||| ||| |    ||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17537240 cactcttttatttgatcaaatcaatgtatgtcccaccaatttttgttggtttaattttcaaagtgtagatccataatgatttaaaccaataagagagtga 17537141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 41330531 - 41330438
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 222  Q
    |||||||||||||||| |||| ||||||||||| | ||||||||    |||||||||||||||||||||  |||||||||||||||||||||||    
T  41330531 cactcttttattagatgaaattaatgtatgtcccatcactttgtgtaggttcaattttcaaagtgtagactcacaatgatttaaaccaataaga 41330438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 43405435 - 43405534
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    ||||||||||||  || |||||||||||||||  |||||||||||   |||| |||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  43405435 cactcttttattgaatgaaatcaatgtatgtctcaccactttgtatatgttctatttccaaagtgtagacccacaatgatttaaatcaataagagagtga 43405534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 27592590 - 27592492
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 227  Q
    |||| ||||||| ||| |||||||||||||||  |||||||| |  |||||| |||| |||||||||||||  ||||||||||||||||||||||||||    
T  27592590 cactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaaccaataagagagtg 27592492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 37455390 - 37455491
Alignment:
Q  128 acactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 227  Q
    |||||| |||||| |||||||||||||||||| | |||| |||||  | |||||||||||||||||||||  |||||| | |||||||||||||||||||    
T  37455390 acactcatttattcgataaaatcaatgtatgttccaccattttgtgggggttcaattttcaaagtgtagactcacaat-aattaaaccaataagagagtg 37455488  T
Q  228 agt 230  Q
    |||    
T  37455489 agt 37455491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 30326012 - 30325911
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||| ||||||| ||| |||||||||||||||  |||||||| |  |||||| || | |||||||||||||| ||||||||||||||||||||| |||||    
T  30326012 cactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatctccaaagtgtagatccgcaatgatttaaaccaataagaaagtga 30325913  T
Q  229 gt 230  Q
    ||    
T  30325912 gt 30325911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 28434951 - 28434863
Alignment:
Q  132 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 222  Q
    ||||||||| |||||||||||| ||||||| |||||| |||  |  ||||||||||||||| |||| ||||||||||||||||||||||||    
T  28434951 tcttttattggataaaatcaatatatgtcccaccactgtgttgg--ttcaattttcaaagtttagacccacaatgatttaaaccaataaga 28434863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 41105707 - 41105607
Alignment:
Q  130 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgag 229  Q
    ||||||||||| ||| ||||||| | |||||| || |||||||  | ||||||||||||||||| | | ||||| ||||||||||||||||||||| |||    
T  41105707 actcttttattggatgaaatcaagggatgtcccactactttgtgtgggttcaattttcaaagtgcatacccacagtgatttaaaccaataagagagcgag 41105608  T
Q  230 t 230  Q
    |    
T  41105607 t 41105607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 226
Target Start/End: Complemental strand, 28611958 - 28611819
Alignment:
Q  87 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 186  Q
    |||| ||| |||||||||||||| | ||||||||   |  | |||||||| ||| |||| || || ||||||||| | ||||||||| |||||| |||||    
T  28611958 gaatgctaacaacactcacttttgagcactctctctaacattcactctttcattggatataaccagtgtatgtcccatcactttgtatgagttccatttt 28611859  T
Q  187 caaagtgtagatccacaatgatttaaaccaataagagagt 226  Q
     ||||||||||  |||||||||||||| |||||| |||||    
T  28611858 taaagtgtagacgcacaatgatttaaatcaataaaagagt 28611819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 34384826 - 34384720
Alignment:
Q  132 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtt 231  Q
    ||||||||| | | |||||||||||||||| || | |||||  |||||||||||||||| | ||||  |||||||||||| ||| |||| |||||||||     
T  34384826 tcttttattgggtgaaatcaatgtatgtcccactattttgtgtgagttcaattttcaaattatagactcacaatgatttagaccgataaaagagtgagta 34384727  T
Q  232 ttaaaga 238  Q
    |||||||    
T  34384726 ttaaaga 34384720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 446 - 593
Target Start/End: Complemental strand, 1679066 - 1678916
Alignment:
Q  446 tatatataaacacattagtagttgtgcatttttt---atctctgaaatataatgtttagttttcacgtggcatcagagctcctgatcttggggggtcttg 542  Q
    |||||||||||| |||||| ||||| ||||||||   ||||||||||||||||  |  |||||||| |||||||  ||||  ||||||| ||||| ||||    
T  1679066 tatatataaacatattagtggttgtacatttttttttatctctgaaatataatagtatgttttcacatggcatcgaagcttttgatcttagggggccttg 1678967  T
Q  543 tttccgcataaaccctagttgcagtccttgcaattacttttgcttttttcg 593  Q
     |||| |||||||| |||  || | | ||||  ||||||||||||||||||    
T  1678966 cttccacataaaccttagccgccgcctttgcgtttacttttgcttttttcg 1678916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 1923685 - 1923597
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 222  Q
    |||||||||||  ||  ||||||||||  ||||||||||  |||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  1923685 ttttattagatgcaaagaatgtatgtcacaccactttgtgtgagttcaatttttaaagtgtagttttacaatgatttaaaccaataaga 1923597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 92 - 228
Target Start/End: Original strand, 25630812 - 25630948
Alignment:
Q  92 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 191  Q
    ||||||| ||| |||||||||||||||||   |  |  ||| |||||||  ||||||| ||||||| ||| || | ||||||   |||||||||||||||    
T  25630812 ctagcaatacttacttttcaacactctctttaacatttactattttatttaataaaattaatgtatatcccactattttgtataggttcaattttcaaag 25630911  T
Q  192 tgtagatccacaatgatttaaaccaataagagagtga 228  Q
    |||||| |||| ||||||||||||||| ||| |||||    
T  25630912 tgtagacccacgatgatttaaaccaattagaaagtga 25630948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 31885921 - 31885878
Alignment:
Q  177 gttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  31885921 gttcaattttcaaagtgtagatctacaatgatttaaaccaataa 31885878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 10666819 - 10666717
Alignment:
Q  136 ttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaa 235  Q
    |||||||||||||||| ||||| ||| |||||||| |  | |||| ||||| ||| ||||||  |||| | |||||||||||||||||||||| | ||||    
T  10666819 ttattagataaaatcattgtatatcctaccactttatgtgggttccatttttaaattgtagactcacattaatttaaaccaataagagagtgaatgttaa 10666720  T
Q  236 aga 238  Q
    |||    
T  10666719 aga 10666717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 228
Target Start/End: Complemental strand, 17435019 - 17434888
Alignment:
Q  95 gcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgt 194  Q
    |||||||| |||||||||||||||||  |  |||| | |||||||| ||| |||  ||| ||||| | || | |||||| |||||| ||||  |||||||    
T  17435019 gcaacacttacttttcaacactctct--ttattactcacttttattggattaaacaaatatatgttctactattttgtatgagttctatttctaaagtgt 17434922  T
Q  195 agatccacaatgatttaaaccaataagagagtga 228  Q
    ||| ||||| |||||||||||||||| |||||||    
T  17434921 agacccacattgatttaaaccaataaaagagtga 17434888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 28155837 - 28155746
Alignment:
Q  130 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagag 223  Q
    |||||||||||  || |||||||||||||| |||||| ||| || | ||| |||||||||||||||||  ||||||| |||| |||||||||||    
T  28155837 actcttttattgaatgaaatcaatgtatgttcaaccattttttatgggtttaattttcaaagtgtaga--cacaatgttttataccaataagag 28155746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 42224729 - 42224627
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 227  Q
    |||||||||||||| | |||||||||||||||| |||||||| |  | |||| |||| |||||||||| ||| ||| |||||| | ||||||| ||||||    
T  42224729 cactcttttattaggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaagagtg 42224630  T
Q  228 agt 230  Q
    |||    
T  42224629 agt 42224627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 28223864 - 28223813
Alignment:
Q  179 tcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||||||| |||| ||| |||||||||||||||||| |||||||||    
T  28223864 tcaattttcaaagtatagacccataatgatttaaaccaataaaagagtgagt 28223813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 36337980 - 36337937
Alignment:
Q  177 gttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||    
T  36337980 gttcaatttccaaagtgtagacccacaatgatttaaaccaataa 36337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 10950145 - 10950223
Alignment:
Q  146 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagaga 224  Q
    |||||||||||||||| |||| |||||| |  ||| ||||||||||| ||||  || |||||||||||| |||||||||    
T  10950145 aaatcaatgtatgtcccaccattttgtatggattctattttcaaagtatagactcataatgatttaaactaataagaga 10950223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 25919270 - 25919344
Alignment:
Q  146 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    |||||||| ||||||  |||| |||||  | | |||||||||||||||||||  |||||||||||||||||||||    
T  25919270 aaatcaatatatgtctcaccattttgtgtgggatcaattttcaaagtgtagactcacaatgatttaaaccaataa 25919344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 14553602 - 14553655
Alignment:
Q  177 gttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 230  Q
    |||||||||| |||||||||| ||||||| | ||||||||| ||||||||||||    
T  14553602 gttcaatttttaaagtgtagacccacaataaattaaaccaacaagagagtgagt 14553655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 43541895 - 43541956
Alignment:
Q  131 ctcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagt 192  Q
    ||||||||||  ||||||||||||||||||  | ||||||||  ||||||||||||||||||    
T  43541895 ctcttttattgaataaaatcaatgtatgtctcatcactttgtgtgagttcaattttcaaagt 43541956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 24915099 - 24915199
Alignment:
Q  131 ctcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtgag 229  Q
    |||||||||||| | |||||||| ||||||| |||||||| |  | |||| ||||||||||||||  ||| ||| |||||| | ||||||| ||||||||    
T  24915099 ctcttttattaggtgaaatcaatatatgtcccaccactttatgtgggttccattttcaaagtgtatgtcctacattgatttcacccaataaaagagtgag 24915198  T
Q  230 t 230  Q
    |    
T  24915199 t 24915199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 2525621 - 2525715
Alignment:
Q  134 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 228  Q
    ||||||| ||| |||||||||||| |   ||||||||||  || |||  ||||||||||||| || || |||||||||||  |||||||||||||    
T  2525621 ttttattggatgaaatcaatgtatctatcaccactttgtgtgatttctgttttcaaagtgtaaatacataatgatttaaattaataagagagtga 2525715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 4427321 - 4427375
Alignment:
Q  166 actttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 220  Q
    |||||||| || || |||||||||||||||||  ||||||||||||||| |||||    
T  4427321 actttgtatgaatttaattttcaaagtgtagactcacaatgatttaaacaaataa 4427375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 27858 - 27963
Alignment:
Q  133 cttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttt 232  Q
    |||||||| |||  ||||||||||||||| ||||||||||  | |||| |||| ||||||||||| |||||||||||||||||||||||||||||||| |    
T  27858 cttttattggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagacccacaatgatttaaaccaataagagagtgagtat 27957  T
Q  233 taaaga 238  Q
    ||||||    
T  27958 taaaga 27963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 27000 - 26902
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 227  Q
    |||||| ||||| ||  |||||||||||||| | ||||||||||  | ||||||||||||||| ||||| ||| |||| ||||||||||||| ||||||    
T  27000 cactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaaaccaataaaagagtg 26902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 9706 - 9801
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagaga 224  Q
    |||| ||||||| ||| |||||||||||| ||| |||| |||||  | |||||||||| ||||||||||  |||||| |||||||| |||||||||    
T  9706 cacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatttaaacgaataagaga 9801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 11252 - 11347
Alignment:
Q  129 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagaga 224  Q
    |||| ||||||| ||| |||||||||||| ||| |||| |||||  | |||||||||| ||||||||||  |||||| |||||||| |||||||||    
T  11252 cacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatttaaacgaataagaga 11347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 448 - 495
Target Start/End: Complemental strand, 12499 - 12452
Alignment:
Q  448 tatataaacacattagtagttgtgcattttttatctctgaaatataat 495  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  12499 tatataaacacattagtggttgtacattatttatctctgaaatataat 12452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 448 - 507
Target Start/End: Original strand, 18936 - 18995
Alignment:
Q  448 tatataaacacattagtagttgtgcattttttatctctgaaatataatgtttagttttca 507  Q
    ||||||||||||||| | ||||| |||| ||||||||| ||||||||| |||||||||||    
T  18936 tatataaacacattaatggttgtacattatttatctctaaaatataatatttagttttca 18995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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