View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2918R-Insertion-4 (Length: 835)

Name: NF2918R-Insertion-4
Description: NF2918R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2918R-Insertion-4
NF2918R-Insertion-4
[»] chr7 (55 HSPs)
chr7 (9-833)||(35262470-35263266)
chr7 (355-525)||(15827849-15828019)
chr7 (355-525)||(20947279-20947449)
chr7 (355-525)||(27557934-27558104)
chr7 (379-525)||(34454608-34454754)
chr7 (562-667)||(47121554-47121659)
chr7 (355-556)||(44545692-44545893)
chr7 (355-669)||(5636111-5636408)
chr7 (562-667)||(34454756-34454861)
chr7 (355-499)||(19980036-19980180)
chr7 (355-559)||(47081941-47082145)
chr7 (384-559)||(26825724-26825899)
chr7 (563-667)||(25049438-25049542)
chr7 (387-559)||(37563448-37563620)
chr7 (355-521)||(47121364-47121529)
chr7 (562-667)||(26825906-26826011)
chr7 (384-559)||(43937988-43938163)
chr7 (562-667)||(43938170-43938275)
chr7 (355-499)||(5280425-5280569)
chr7 (568-667)||(5280553-5280652)
chr7 (583-669)||(19980190-19980276)
chr7 (562-667)||(12928315-12928420)
chr7 (568-669)||(20947194-20947295)
chr7 (562-667)||(26825633-26825738)
chr7 (562-659)||(12931014-12931111)
chr7 (393-458)||(47121595-47121660)
chr7 (560-667)||(27558126-27558233)
chr7 (562-667)||(43937897-43938002)
chr7 (562-667)||(12929530-12929635)
chr7 (560-667)||(34454487-34454594)
chr7 (379-489)||(12928203-12928313)
chr7 (562-667)||(37563357-37563462)
chr7 (562-667)||(37563630-37563735)
chr7 (604-669)||(44545913-44545978)
chr7 (575-667)||(44545598-44545690)
chr7 (604-667)||(27557973-27558036)
chr7 (604-667)||(34454676-34454739)
chr7 (592-667)||(47081850-47081925)
chr7 (384-458)||(12929449-12929523)
chr7 (394-448)||(12931056-12931110)
chr7 (562-616)||(23191130-23191184)
chr7 (604-669)||(47082041-47082106)
chr7 (780-825)||(6562021-6562066)
chr7 (562-635)||(15827756-15827829)
chr7 (568-667)||(5280275-5280374)
chr7 (604-667)||(12928235-12928298)
chr7 (604-667)||(12929450-12929513)
chr7 (604-667)||(15827917-15827980)
chr7 (604-667)||(19980075-19980138)
chr7 (604-667)||(26825826-26825889)
chr7 (568-667)||(27557851-27557950)
chr7 (394-458)||(34454798-34454862)
chr7 (394-458)||(47081849-47081913)
chr7 (412-458)||(27558188-27558234)
chr7 (326-355)||(43937908-43937937)
[»] chr4 (75 HSPs)
chr4 (355-667)||(37677851-37678146)
chr4 (355-667)||(8287018-8287314)
chr4 (355-499)||(27813135-27813278)
chr4 (357-490)||(48507502-48507635)
chr4 (562-667)||(13872345-13872450)
chr4 (384-559)||(54961546-54961721)
chr4 (384-525)||(12691521-12691662)
chr4 (384-559)||(47862267-47862442)
chr4 (384-559)||(53559502-53559677)
chr4 (384-681)||(22249722-22250002)
chr4 (562-674)||(48507693-48507805)
chr4 (355-499)||(35730815-35730959)
chr4 (560-667)||(47980688-47980795)
chr4 (560-667)||(54961434-54961541)
chr4 (355-559)||(19916750-19916954)
chr4 (384-523)||(20086567-20086706)
chr4 (562-667)||(12691681-12691786)
chr4 (568-667)||(37678130-37678229)
chr4 (355-525)||(489311-489482)
chr4 (355-525)||(515103-515274)
chr4 (562-667)||(12691409-12691514)
chr4 (384-559)||(13872163-13872338)
chr4 (562-667)||(54961707-54961812)
chr4 (562-669)||(19916657-19916764)
chr4 (568-667)||(50246140-50246239)
chr4 (384-499)||(33294259-33294374)
chr4 (562-676)||(53559663-53559777)
chr4 (568-669)||(35730943-35731044)
chr4 (563-667)||(22250010-22250114)
chr4 (562-667)||(27813329-27813433)
chr4 (563-667)||(47862155-47862259)
chr4 (563-635)||(20086472-20086544)
chr4 (384-499)||(47980800-47980915)
chr4 (563-669)||(50245858-50245964)
chr4 (384-490)||(34238585-34238691)
chr4 (562-667)||(47981912-47982017)
chr4 (562-666)||(34238474-34238578)
chr4 (355-499)||(50246011-50246156)
chr4 (568-667)||(19916938-19917037)
chr4 (386-559)||(20601064-20601236)
chr4 (604-667)||(48507539-48507602)
chr4 (597-667)||(19740863-19740933)
chr4 (562-667)||(33294419-33294524)
chr4 (568-669)||(45199128-45199229)
chr4 (568-667)||(8286935-8287034)
chr4 (612-667)||(27813181-27813236)
chr4 (604-667)||(47862277-47862340)
chr4 (394-458)||(47981954-47982018)
chr4 (394-458)||(54961433-54961497)
chr4 (562-633)||(33294181-33294252)
chr4 (394-457)||(48507735-48507798)
chr4 (604-669)||(13872263-13872328)
chr4 (397-459)||(47980686-47980748)
chr4 (611-667)||(35730665-35730721)
chr4 (394-458)||(8287251-8287315)
chr4 (604-667)||(12691531-12691594)
chr4 (604-667)||(20086633-20086696)
chr4 (568-667)||(27813052-27813151)
chr4 (394-458)||(37677850-37677914)
chr4 (394-458)||(47862154-47862218)
chr4 (562-634)||(47862428-47862500)
chr4 (394-458)||(50246176-50246240)
chr4 (604-663)||(53559512-53559571)
chr4 (563-673)||(20086714-20086824)
chr4 (604-667)||(34238595-34238658)
chr4 (403-458)||(35730664-35730719)
chr4 (394-457)||(35730979-35731042)
chr4 (394-457)||(50245860-50245923)
chr4 (394-461)||(54961749-54961816)
chr4 (562-667)||(13872072-13872177)
chr4 (384-458)||(26601271-26601345)
chr4 (355-437)||(32846448-32846530)
chr4 (394-460)||(34238781-34238847)
chr4 (562-635)||(26601352-26601425)
chr4 (604-667)||(50246053-50246117)
[»] chr5 (82 HSPs)
chr5 (355-559)||(22533484-22533688)
chr5 (355-523)||(27753609-27753777)
chr5 (351-559)||(8323138-8323346)
chr5 (386-559)||(6421716-6421889)
chr5 (355-560)||(41339447-41339651)
chr5 (384-559)||(12990903-12991078)
chr5 (384-559)||(33735407-33735582)
chr5 (355-499)||(16118105-16118249)
chr5 (562-676)||(33735589-33735703)
chr5 (384-559)||(13064524-13064699)
chr5 (384-559)||(25253201-25253376)
chr5 (562-669)||(6421898-6422005)
chr5 (355-499)||(7015663-7015807)
chr5 (355-525)||(34404569-34404740)
chr5 (562-667)||(14745451-14745556)
chr5 (384-559)||(32052318-32052493)
chr5 (562-667)||(32052500-32052605)
chr5 (384-559)||(37945109-37945284)
chr5 (568-667)||(7015791-7015890)
chr5 (384-559)||(25316991-25317167)
chr5 (355-521)||(18934799-18934965)
chr5 (560-667)||(12991062-12991169)
chr5 (560-667)||(37945268-37945374)
chr5 (562-667)||(7015511-7015616)
chr5 (562-667)||(13064685-13064790)
chr5 (562-667)||(25253089-25253194)
chr5 (562-667)||(25253362-25253467)
chr5 (562-667)||(25316879-25316984)
chr5 (562-667)||(25317153-25317258)
chr5 (562-667)||(37944997-37945102)
chr5 (562-643)||(41339380-41339462)
chr5 (384-525)||(18013727-18013868)
chr5 (560-667)||(27753482-27753588)
chr5 (560-667)||(32052227-32052334)
chr5 (592-669)||(6421623-6421700)
chr5 (562-676)||(16117955-16118061)
chr5 (570-667)||(22533393-22533490)
chr5 (562-667)||(33735316-33735421)
chr5 (429-559)||(20704873-20705003)
chr5 (562-669)||(18934990-18935096)
chr5 (568-667)||(21260868-21260967)
chr5 (355-523)||(21260951-21261118)
chr5 (562-667)||(20704989-20705095)
chr5 (355-466)||(22024057-22024168)
chr5 (604-667)||(22533586-22533649)
chr5 (606-667)||(41339550-41339611)
chr5 (371-448)||(12628317-12628394)
chr5 (604-667)||(8323181-8323244)
chr5 (394-458)||(14745450-14745514)
chr5 (562-634)||(14745589-14745661)
chr5 (568-667)||(18934716-18934815)
chr5 (394-458)||(21260867-21260931)
chr5 (568-667)||(22024152-22024251)
chr5 (604-667)||(33735509-33735572)
chr5 (394-458)||(33735631-33735695)
chr5 (604-666)||(6421819-6421881)
chr5 (597-667)||(8323367-8323437)
chr5 (568-669)||(27753761-27753864)
chr5 (604-677)||(22533708-22533781)
chr5 (396-458)||(31118957-31119019)
chr5 (562-635)||(18013647-18013720)
chr5 (563-643)||(20704763-20704844)
chr5 (604-667)||(147424-147487)
chr5 (604-667)||(7015705-7015768)
chr5 (604-667)||(12990913-12990976)
chr5 (394-458)||(12991106-12991170)
chr5 (604-667)||(13064534-13064597)
chr5 (604-667)||(16118147-16118210)
chr5 (604-667)||(18013737-18013800)
chr5 (604-667)||(25253211-25253274)
chr5 (394-458)||(25253404-25253468)
chr5 (394-458)||(25317195-25317259)
chr5 (604-667)||(27753675-27753738)
chr5 (604-667)||(32052420-32052483)
chr5 (394-458)||(32052542-32052606)
chr5 (394-458)||(34404486-34404550)
chr5 (604-667)||(34404487-34404550)
chr5 (604-667)||(37945119-37945182)
chr5 (441-499)||(9915503-9915561)
chr5 (562-659)||(18013888-18013984)
chr5 (607-663)||(22024070-22024126)
chr5 (326-355)||(37945008-37945037)
[»] chr2 (70 HSPs)
chr2 (355-499)||(41846546-41846690)
chr2 (355-559)||(22309525-22309729)
chr2 (560-669)||(18476908-18477017)
chr2 (379-667)||(32519265-32519536)
chr2 (355-559)||(9693836-9694040)
chr2 (355-559)||(37984813-37985017)
chr2 (384-525)||(17580443-17580584)
chr2 (355-499)||(5608748-5608892)
chr2 (355-499)||(28599513-28599657)
chr2 (351-525)||(17284817-17284991)
chr2 (562-667)||(4375827-4375932)
chr2 (355-559)||(17366712-17366912)
chr2 (562-667)||(20911133-20911238)
chr2 (384-559)||(20911245-20911420)
chr2 (355-523)||(43681988-43682155)
chr2 (355-521)||(4375635-4375801)
chr2 (562-667)||(28599703-28599808)
chr2 (562-669)||(19606918-19607025)
chr2 (568-667)||(22309713-22309812)
chr2 (384-499)||(1150052-1150167)
chr2 (562-676)||(1150213-1150327)
chr2 (562-667)||(1149940-1150045)
chr2 (562-667)||(16366966-16367071)
chr2 (384-559)||(16367057-16367232)
chr2 (562-667)||(22731808-22731913)
chr2 (568-669)||(9959107-9959208)
chr2 (355-525)||(9958953-9959123)
chr2 (560-665)||(37985001-37985106)
chr2 (562-667)||(45663784-45663889)
chr2 (560-621)||(5608641-5608702)
chr2 (563-667)||(41846395-41846499)
chr2 (562-634)||(9693778-9693850)
chr2 (568-667)||(9694024-9694123)
chr2 (570-667)||(10446835-10446932)
chr2 (562-659)||(16367239-16367336)
chr2 (562-667)||(17285011-17285116)
chr2 (584-677)||(22309424-22309517)
chr2 (568-669)||(28599428-28599529)
chr2 (562-667)||(32519158-32519263)
chr2 (384-525)||(8089567-8089708)
chr2 (562-669)||(8089453-8089560)
chr2 (604-670)||(17580453-17580519)
chr2 (562-667)||(9958829-9958933)
chr2 (582-667)||(20911426-20911510)
chr2 (436-525)||(18477035-18477124)
chr2 (560-667)||(17580331-17580438)
chr2 (394-458)||(20911132-20911196)
chr2 (604-667)||(41846588-41846651)
chr2 (570-667)||(17366629-17366726)
chr2 (384-458)||(22731727-22731801)
chr2 (568-634)||(41846674-41846740)
chr2 (413-522)||(19607049-19607158)
chr2 (603-667)||(28599551-28599615)
chr2 (563-667)||(43681859-43681963)
chr2 (394-458)||(1149939-1150003)
chr2 (604-667)||(1150062-1150125)
chr2 (394-458)||(9694060-9694124)
chr2 (604-667)||(16367159-16367222)
chr2 (394-458)||(17284745-17284809)
chr2 (604-667)||(17366751-17366814)
chr2 (582-676)||(17580620-17580715)
chr2 (394-458)||(22309749-22309813)
chr2 (604-667)||(22731728-22731791)
chr2 (394-458)||(32519157-32519221)
chr2 (394-458)||(41846394-41846458)
chr2 (592-635)||(8089756-8089799)
chr2 (394-457)||(28599430-28599493)
chr2 (384-458)||(45663703-45663777)
chr2 (604-669)||(4375674-4375739)
chr2 (413-458)||(22309433-22309478)
[»] chr1 (101 HSPs)
chr1 (355-667)||(24701273-24701567)
chr1 (355-559)||(46544825-46545029)
chr1 (355-509)||(33030420-33030574)
chr1 (384-559)||(25414938-25415113)
chr1 (384-559)||(26953195-26953370)
chr1 (355-525)||(30830259-30830429)
chr1 (355-525)||(35312104-35312274)
chr1 (355-524)||(8890338-8890507)
chr1 (384-558)||(46849753-46849927)
chr1 (384-499)||(29042870-29042985)
chr1 (384-667)||(33347419-33347685)
chr1 (384-499)||(46364729-46364844)
chr1 (384-559)||(739334-739508)
chr1 (562-667)||(12577288-12577393)
chr1 (562-667)||(19755681-19755786)
chr1 (384-525)||(29980766-29980907)
chr1 (564-675)||(35311969-35312080)
chr1 (563-677)||(37152815-37152929)
chr1 (384-523)||(49003005-49003144)
chr1 (562-667)||(1040301-1040406)
chr1 (562-667)||(1047207-1047312)
chr1 (384-559)||(37152632-37152807)
chr1 (384-497)||(12577168-12577281)
chr1 (560-667)||(29043029-29043136)
chr1 (568-667)||(33030337-33030436)
chr1 (562-668)||(49002878-49002984)
chr1 (384-559)||(1047319-1047494)
chr1 (562-667)||(2953467-2953572)
chr1 (384-559)||(2953558-2953733)
chr1 (562-667)||(2953740-2953845)
chr1 (562-667)||(26953104-26953209)
chr1 (562-659)||(33030611-33030708)
chr1 (562-667)||(46364577-46364682)
chr1 (562-667)||(46849934-46850039)
chr1 (562-667)||(49003151-49003256)
chr1 (384-525)||(6056491-6056632)
chr1 (384-525)||(19755533-19755674)
chr1 (562-665)||(5926524-5926627)
chr1 (355-559)||(10019466-10019671)
chr1 (562-667)||(739222-739327)
chr1 (384-559)||(5183600-5183775)
chr1 (562-667)||(5926797-5926902)
chr1 (562-663)||(33347692-33347793)
chr1 (354-524)||(51933903-51934073)
chr1 (412-525)||(34176051-34176164)
chr1 (568-667)||(48380684-48380783)
chr1 (562-667)||(6056654-6056760)
chr1 (560-662)||(46364849-46364951)
chr1 (562-667)||(1047480-1047585)
chr1 (562-667)||(5183509-5183614)
chr1 (562-667)||(6056379-6056484)
chr1 (562-667)||(8890215-8890319)
chr1 (560-634)||(30830166-30830240)
chr1 (568-667)||(8890491-8890590)
chr1 (562-656)||(25415120-25415214)
chr1 (562-667)||(5183782-5183887)
chr1 (562-667)||(29980914-29981019)
chr1 (604-669)||(35312170-35312235)
chr1 (359-521)||(48380771-48380933)
chr1 (562-667)||(48380959-48381064)
chr1 (563-667)||(12577013-12577117)
chr1 (560-664)||(37152544-37152648)
chr1 (358-523)||(52454885-52455050)
chr1 (394-458)||(5926839-5926903)
chr1 (604-667)||(10019569-10019632)
chr1 (604-667)||(24701587-24701650)
chr1 (562-669)||(29980640-29980747)
chr1 (604-667)||(30830327-30830390)
chr1 (610-669)||(34176117-34176176)
chr1 (604-667)||(46364771-46364834)
chr1 (604-670)||(26953294-26953360)
chr1 (562-656)||(26953377-26953471)
chr1 (592-635)||(46849693-46849736)
chr1 (560-618)||(10019424-10019482)
chr1 (582-635)||(739514-739567)
chr1 (559-667)||(6334659-6334767)
chr1 (397-458)||(46849979-46850040)
chr1 (604-667)||(2953660-2953723)
chr1 (394-458)||(2953782-2953846)
chr1 (604-667)||(6056501-6056564)
chr1 (604-667)||(12577208-12577271)
chr1 (604-667)||(19755601-19755664)
chr1 (394-458)||(19755723-19755787)
chr1 (394-458)||(25414846-25414910)
chr1 (604-667)||(29980834-29980897)
chr1 (394-458)||(33030336-33030400)
chr1 (604-667)||(33030459-33030522)
chr1 (604-667)||(37152734-37152797)
chr1 (394-458)||(37152856-37152920)
chr1 (394-458)||(46364576-46364640)
chr1 (604-667)||(46849854-46849917)
chr1 (394-458)||(49003193-49003257)
chr1 (604-667)||(739344-739406)
chr1 (568-635)||(46545013-46545080)
chr1 (394-448)||(5926531-5926585)
chr1 (561-635)||(37152468-37152542)
chr1 (562-616)||(49989849-49989903)
chr1 (443-513)||(49989967-49990037)
chr1 (570-635)||(8419743-8419808)
chr1 (326-355)||(29980653-29980682)
chr1 (326-355)||(48380695-48380724)
[»] chr8 (87 HSPs)
chr8 (384-559)||(37342876-37343051)
chr8 (384-559)||(41801910-41802085)
chr8 (560-663)||(38619805-38619908)
chr8 (384-678)||(35163489-35163771)
chr8 (384-559)||(11478260-11478435)
chr8 (355-671)||(22763681-22763981)
chr8 (355-525)||(31689981-31690151)
chr8 (384-525)||(20096135-20096276)
chr8 (562-669)||(20096021-20096128)
chr8 (396-676)||(41182023-41182286)
chr8 (355-525)||(40422289-40422458)
chr8 (384-559)||(40525622-40525797)
chr8 (384-559)||(43866826-43867001)
chr8 (560-667)||(23424515-23424622)
chr8 (563-674)||(29190436-29190547)
chr8 (562-667)||(547711-547816)
chr8 (562-667)||(11478148-11478253)
chr8 (384-490)||(23424627-23424733)
chr8 (562-667)||(40525510-40525615)
chr8 (384-489)||(25287907-25288012)
chr8 (355-499)||(15716030-15716174)
chr8 (384-524)||(29190289-29190428)
chr8 (384-559)||(7487-7662)
chr8 (562-667)||(38600226-38600331)
chr8 (562-667)||(40422163-40422268)
chr8 (384-521)||(547567-547704)
chr8 (384-525)||(36623481-36623622)
chr8 (568-667)||(40422442-40422541)
chr8 (560-667)||(41801819-41801926)
chr8 (562-676)||(9632579-9632693)
chr8 (562-667)||(7396-7501)
chr8 (562-667)||(7669-7774)
chr8 (355-485)||(13566496-13566626)
chr8 (562-667)||(36623355-36623460)
chr8 (562-667)||(36623629-36623734)
chr8 (562-667)||(37343058-37343163)
chr8 (568-669)||(37713697-37713798)
chr8 (562-667)||(41251126-41251231)
chr8 (562-667)||(43866714-43866819)
chr8 (562-667)||(25287795-25287900)
chr8 (562-667)||(26739715-26739825)
chr8 (355-499)||(23514107-23514251)
chr8 (562-669)||(27857018-27857125)
chr8 (355-458)||(9632414-9632517)
chr8 (395-516)||(41251249-41251370)
chr8 (562-634)||(547466-547538)
chr8 (394-458)||(547753-547817)
chr8 (568-667)||(9632331-9632430)
chr8 (604-667)||(23424637-23424700)
chr8 (415-499)||(27856888-27856972)
chr8 (568-667)||(31689898-31689997)
chr8 (562-634)||(37342818-37342890)
chr8 (562-667)||(26739993-26740099)
chr8 (355-458)||(37713782-37713885)
chr8 (562-667)||(23424788-23424893)
chr8 (562-667)||(41251402-41251507)
chr8 (582-667)||(43867007-43867092)
chr8 (384-525)||(26739832-26739972)
chr8 (562-631)||(31690172-31690241)
chr8 (604-667)||(25287917-25287980)
chr8 (562-630)||(29190200-29190268)
chr8 (604-667)||(31690020-31690083)
chr8 (394-458)||(41251125-41251189)
chr8 (394-457)||(7396-7459)
chr8 (562-659)||(20096297-20096397)
chr8 (394-457)||(29190477-29190540)
chr8 (562-633)||(40525783-40525854)
chr8 (568-669)||(13566411-13566512)
chr8 (568-672)||(22763593-22763697)
chr8 (582-667)||(24529952-24530037)
chr8 (570-635)||(28339287-28339352)
chr8 (604-667)||(11478270-11478333)
chr8 (604-667)||(15716194-15716257)
chr8 (604-667)||(29190355-29190418)
chr8 (604-667)||(37342978-37343041)
chr8 (394-458)||(40422162-40422226)
chr8 (604-667)||(40422357-40422419)
chr8 (394-458)||(40422478-40422542)
chr8 (604-667)||(40525632-40525695)
chr8 (361-457)||(40933267-40933363)
chr8 (562-621)||(27856791-27856850)
chr8 (394-453)||(38619805-38619864)
chr8 (605-667)||(41251249-41251311)
chr8 (604-669)||(15716070-15716135)
chr8 (355-525)||(24529764-24529932)
chr8 (604-665)||(36623551-36623612)
chr8 (394-460)||(37343100-37343166)
[»] chr3 (69 HSPs)
chr3 (355-499)||(33989100-33989243)
chr3 (355-667)||(33458002-33458299)
chr3 (354-499)||(24576375-24576520)
chr3 (355-524)||(30890293-30890462)
chr3 (355-524)||(46670385-46670553)
chr3 (355-522)||(30803932-30804100)
chr3 (384-499)||(21300287-21300402)
chr3 (384-559)||(53037142-53037317)
chr3 (563-669)||(30890484-30890590)
chr3 (562-669)||(21300409-21300516)
chr3 (384-499)||(35432466-35432581)
chr3 (562-667)||(1741390-1741495)
chr3 (562-667)||(10749321-10749426)
chr3 (384-559)||(11312829-11313004)
chr3 (562-636)||(30804124-30804198)
chr3 (384-559)||(40256989-40257163)
chr3 (384-525)||(10749433-10749574)
chr3 (562-674)||(10998149-10998261)
chr3 (384-525)||(22129121-22129262)
chr3 (384-525)||(55036784-55036925)
chr3 (568-667)||(30803849-30803948)
chr3 (384-499)||(51279385-51279499)
chr3 (384-559)||(10997989-10998163)
chr3 (568-669)||(33457917-33458018)
chr3 (562-667)||(38642634-38642739)
chr3 (562-667)||(46670251-46670356)
chr3 (570-669)||(55036670-55036769)
chr3 (562-669)||(55036945-55037052)
chr3 (562-676)||(11312729-11312843)
chr3 (562-667)||(28310352-28310456)
chr3 (560-633)||(40257147-40257220)
chr3 (563-667)||(51279234-51279338)
chr3 (779-835)||(16003928-16003984)
chr3 (562-665)||(40256879-40256982)
chr3 (562-664)||(10749672-10749774)
chr3 (355-559)||(28310442-28310646)
chr3 (384-559)||(1741481-1741656)
chr3 (604-667)||(55036794-55036857)
chr3 (394-457)||(21300451-21300514)
chr3 (581-667)||(24576291-24576377)
chr3 (356-525)||(30654612-30654777)
chr3 (563-633)||(22129043-22129113)
chr3 (394-460)||(30803846-30803912)
chr3 (562-636)||(33989295-33989369)
chr3 (560-635)||(10997912-10997984)
chr3 (355-448)||(21255736-21255829)
chr3 (562-635)||(22129285-22129358)
chr3 (568-664)||(30654762-30654857)
chr3 (570-635)||(46670539-46670604)
chr3 (394-458)||(1741389-1741453)
chr3 (394-458)||(10749320-10749384)
chr3 (604-667)||(21300329-21300392)
chr3 (604-667)||(30803971-30804034)
chr3 (604-667)||(30890332-30890395)
chr3 (394-458)||(33458236-33458300)
chr3 (604-667)||(35432476-35432539)
chr3 (560-667)||(53037030-53037137)
chr3 (604-667)||(53037152-53037215)
chr3 (412-499)||(38642784-38642870)
chr3 (604-670)||(40256999-40257065)
chr3 (394-457)||(55036672-55036735)
chr3 (562-667)||(30654487-30654592)
chr3 (412-458)||(35432408-35432454)
chr3 (394-460)||(40256874-40256940)
chr3 (595-667)||(49652-49724)
chr3 (604-664)||(10749443-10749503)
chr3 (397-454)||(30654800-30654857)
chr3 (615-667)||(35432409-35432461)
chr3 (604-669)||(46670450-46670514)
[»] chr6 (70 HSPs)
chr6 (384-525)||(26542732-26542873)
chr6 (384-559)||(5064429-5064604)
chr6 (562-667)||(20774357-20774462)
chr6 (384-525)||(32337679-32337820)
chr6 (355-525)||(7612634-7612803)
chr6 (355-499)||(3586365-3586509)
chr6 (355-522)||(3299690-3299857)
chr6 (384-559)||(13480323-13480498)
chr6 (384-559)||(22493995-22494170)
chr6 (568-667)||(7612551-7612650)
chr6 (562-669)||(32337565-32337672)
chr6 (384-667)||(21880367-21880633)
chr6 (384-667)||(23291859-23292125)
chr6 (355-525)||(31879543-31879713)
chr6 (412-525)||(1066267-1066380)
chr6 (384-499)||(20561081-20561196)
chr6 (562-664)||(31879734-31879836)
chr6 (562-667)||(7612825-7612930)
chr6 (562-667)||(13480211-13480316)
chr6 (562-667)||(20994967-20995072)
chr6 (562-667)||(26503630-26503735)
chr6 (562-667)||(5064338-5064443)
chr6 (562-667)||(20560931-20561036)
chr6 (392-458)||(21544520-21544586)
chr6 (562-667)||(21880640-21880745)
chr6 (568-667)||(26542617-26542719)
chr6 (562-635)||(1066173-1066246)
chr6 (560-667)||(3299562-3299669)
chr6 (562-669)||(5064611-5064718)
chr6 (560-667)||(30234866-30234973)
chr6 (565-667)||(3586215-3586316)
chr6 (562-676)||(26542896-26543010)
chr6 (355-466)||(31386885-31386995)
chr6 (562-667)||(737973-738078)
chr6 (562-667)||(13480484-13480589)
chr6 (562-667)||(15819766-15819871)
chr6 (355-457)||(19296423-19296525)
chr6 (568-669)||(19296509-19296610)
chr6 (562-667)||(23291747-23291852)
chr6 (603-667)||(5064531-5064595)
chr6 (604-669)||(31879459-31879523)
chr6 (568-667)||(3299841-3299940)
chr6 (355-479)||(26503450-26503573)
chr6 (562-669)||(31393459-31393566)
chr6 (560-657)||(9607590-9607687)
chr6 (587-667)||(16704610-16704690)
chr6 (562-635)||(22493916-22493988)
chr6 (562-635)||(22494156-22494229)
chr6 (563-667)||(32337844-32337947)
chr6 (394-458)||(7612550-7612614)
chr6 (604-667)||(7612673-7612736)
chr6 (429-525)||(15819649-15819745)
chr6 (604-667)||(26542742-26542805)
chr6 (780-835)||(12249722-12249777)
chr6 (394-457)||(32337567-32337630)
chr6 (604-677)||(19296413-19296486)
chr6 (355-485)||(20774175-20774304)
chr6 (562-667)||(20994822-20994926)
chr6 (392-458)||(26542936-26543002)
chr6 (603-667)||(13480332-13480396)
chr6 (562-635)||(20561203-20561276)
chr6 (568-668)||(20774091-20774191)
chr6 (384-448)||(737902-737966)
chr6 (604-667)||(3586407-3586470)
chr6 (394-458)||(15819808-15819872)
chr6 (394-458)||(19039107-19039171)
chr6 (394-458)||(20994821-20994885)
chr6 (604-667)||(21544521-21544584)
chr6 (604-667)||(32337689-32337752)
chr6 (326-355)||(13480549-13480578)
[»] scaffold0279 (5 HSPs)
scaffold0279 (355-525)||(10985-11155)
scaffold0279 (560-667)||(10856-10963)
scaffold0279 (604-667)||(11053-11116)
scaffold0279 (568-667)||(11139-11238)
scaffold0279 (412-458)||(10855-10901)
[»] scaffold0321 (4 HSPs)
scaffold0321 (386-559)||(10779-10952)
scaffold0321 (562-667)||(10665-10770)
scaffold0321 (604-666)||(10787-10849)
scaffold0321 (594-667)||(10970-11043)
[»] scaffold0022 (2 HSPs)
scaffold0022 (355-499)||(120285-120429)
scaffold0022 (412-457)||(120208-120253)
[»] scaffold0206 (2 HSPs)
scaffold0206 (562-667)||(10328-10433)
scaffold0206 (394-458)||(10327-10391)
[»] scaffold0202 (3 HSPs)
scaffold0202 (355-525)||(14321-14491)
scaffold0202 (568-669)||(14236-14337)
scaffold0202 (561-667)||(14509-14615)
[»] scaffold0201 (2 HSPs)
scaffold0201 (412-559)||(13987-14134)
scaffold0201 (562-636)||(14169-14243)
[»] scaffold0233 (4 HSPs)
scaffold0233 (355-495)||(8519-8659)
scaffold0233 (568-667)||(8436-8535)
scaffold0233 (563-667)||(8709-8813)
scaffold0233 (604-667)||(8558-8621)
[»] scaffold1493 (3 HSPs)
scaffold1493 (384-489)||(757-862)
scaffold1493 (562-667)||(869-974)
scaffold1493 (604-667)||(789-852)
[»] scaffold0251 (1 HSPs)
scaffold0251 (570-636)||(12053-12119)


Alignment Details
Target: chr7 (Bit Score: 472; Significance: 0; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 472; E-Value: 0
Query Start/End: Original strand, 9 - 833
Target Start/End: Complemental strand, 35263266 - 35262470
Alignment:
Q  9 aatactgtgatgggtgagtgatattggttgcagaggattgcgtccttgagtgtagaccctcccctgaaaagaatctctgtcgatcacatatttatttaat 108  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35263266 aatactgtgatgggtgagtgatattggttgcagaggattgcttccttgagtgtagaccctcccctgaaaagaatctctgtcgatcacatatttatttaat 35263167  T
Q  109 gatatttatcgtcataatttgtcgtatattatttgtcttaaatgacaaccttgttggtcacgtcaaaagactagtgaatcgcgcgcattttaactgacaa 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35263166 gatatttatcgtcataatttgtcgtatattatttgtcttaaatgacaaccttgttggtcacgtcaaaagactagtgaatcgcgcgcattttaaccgacaa 35263067  T
Q  209 cttccaattccgttaacgaaatttacttcgccgaaactacgggtattttcccggtaaaccgtcactcgggttttgtttacnnnnnnnnnagttccgttga 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||         |||||||||||    
T  35263066 cttccaattccgttaacgaaatttacttcgccgaaactacgggtattttccctgtaaaccgtcactcgcgttttgttaactttttttttagttccgttga 35262967  T
Q  309 cta-ttttcattttgaattttcgtccttgtaaatataggtcatttgaaaatattaattatttaaaaaatgattctgattacatcttattagtaagttcag 407  Q
    ||| |||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||    ||| |||||    
T  35262966 ctattttttattttgaattttcgtccttgcaaatatatgtcatttgaaaatattaattatttgaaaaataattctaattacatctta----taacttcag 35262871  T
Q  408 agaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgata 507  Q
      |||||||||||||||    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||| | | ||    
T  35262870 gaaagaaaattcaaattgcttatatttgcagggacgaaatatctatttaagtcaaccacattgctcaatcatcacttgccacatgggcaccatatcgcta 35262771  T
Q  508 ataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgatatcaaaagtcaaatgattaaattttgcagtgacagattgaaagaatta 607  Q
    ||||||||||||||||||        |||||||||||||||                 ||||||||||||||||||||||||| ||||||| ||| ||||    
T  35262770 ataacaacccacctcagcaaaaaaa-ctaattatgatcaaa-----------------agtcaaatgattaaattttgcagtggcagattggaaggatta 35262689  T
Q  608 gtaacttcagggacaaaaattcaaatgattatattttgcagggacgaaagacctatttaaacattttttatataac-tttgggacagacaaatagatata 706  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||    
T  35262688 gtaacttcagagacaaaaattcaaatgactatattttgcagggacgaaagacctatttaaacattttttatataacttttgggacaaacgaatagatata 35262589  T
Q  707 gatattaacataaaaccctaataatcttgtnnnnnnnnnnncctacaatataagagcatctccaatgaaggtcctctgaatgctaagtaaattatttcac 806  Q
    ||||||||||||||||||||||||| ||||           ||     ||||| |||||||||||||  | |||||||||||||||||||||||||||||    
T  35262588 gatattaacataaaaccctaataattttgt--caaaaaaaacc-----tataaaagcatctccaatg-ggatcctctgaatgctaagtaaattatttcac 35262497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 355 - 525
Target Start/End: Complemental strand, 15828019 - 15827849
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||||| ||||| || ||||||||||||   | ||||||||||||||||||||  ||||    
T  15828019 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatt 15827920  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    |||| ||||||| | || |||||||||||||||||| |||||||| |||| |||| ||| | |||||||||    
T  15827919 taagccaaccacctcgctcaatcatcacttgccacatgggcaccacgttgctaatgacagctcacctcagc 15827849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 355 - 525
Target Start/End: Original strand, 20947279 - 20947449
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| |  | ||||||||| |||||||| ||||  || |||||||||||| | | ||||||| |||||||||| |||||||    
T  20947279 aaatattaatcatttgaaaaatggtcataattacatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgaagggacgaaatatctatt 20947378  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    |||||||||||| ||| |||||||||| |||||||| |||||||| || | |||| ||| |||||||||||    
T  20947379 taagtcaaccaccttgtccaatcatcatttgccacatgggcaccacgtcgttaatgacagcccacctcagc 20947449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 355 - 525
Target Start/End: Original strand, 27557934 - 27558104
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| |  | ||||||||| |||||||| ||||  || |||||||||||| | | |||||||||||||||||||| |||||    
T  27557934 aaatattaatcatttgaaaaatggtcttaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatt 27558033  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    |||| ||||||  | | ||||||||||||||||||| |||||||| || | |||| ||| |||||||||||    
T  27558034 taagccaaccatctcgtccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagc 27558104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 379 - 525
Target Start/End: Complemental strand, 34454754 - 34454608
Alignment:
Q  379 ttctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatca 478  Q
    |||| ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||| | |||||||||    
T  34454754 ttctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgcccaatca 34454655  T
Q  479 tcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    |||||||||||| |||||||| || | |||| ||| |||||||||||    
T  34454654 tcacttgccacatgggcaccacgtcgctaatgacagcccacctcagc 34454608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 47121554 - 47121659
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgattatattttgcagggacgaaagacct 661  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||||||||| ||| |||||||||||| | |   ||||||||||||||||||||    
T  47121554 caaaagtcaaatgattaaattttgcagtggtagattgaaagtattagtaacttcagagacgaaaattcaaatggtcaatatttgcagggacgaaagacct 47121653  T
Q  662 atttaa 667  Q
    ||||||    
T  47121654 atttaa 47121659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 355 - 556
Target Start/End: Complemental strand, 44545893 - 44545692
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||||| || |   | |||||||||||| | | ||||||||| | |||||||| |||||    
T  44545893 aaatattaatcattttaaaaatggtcctaattacatctaattagtaacttaatgaacgaaaattcaaatgacctatatttgcaagaacgaaagacctatt 44545794  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaa 554  Q
    |||| ||||||| | || |||||||||||||||||| ||||||||||| | |||| ||||| |||||||||       |||||||| || ||||||||||    
T  44545793 taagccaaccacctcgctcaatcatcacttgccacatgggcaccatgtcgctaatgacaactcacctcagcaaaaaaacctaattaggaccaaaagtcaa 44545694  T
Q  555 at 556  Q
    ||    
T  44545693 at 44545692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 355 - 669
Target Start/End: Original strand, 5636111 - 5636408
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||||| ||||| || |||||||||||| |   ||||||| |||||||||| | | | |    
T  5636111 aaatattaatcatttgaaaaatggtcctaattacatctaattagtaacttcagggacgaaaattcaaatgacttatatttgaagggacgaaaaaccgaat 5636210  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaa 554  Q
    |||| ||||||| | || ||||||||| ||| |||| |||||||| |||| |||| ||| ||||||||| |       |||||||| || |             
T  5636211 taagccaaccacctcgcacaatcatcatttgtcacatgggcaccacgttgctaatgacagcccacctcaactaaaaaacctaattaggacc--------- 5636301  T
Q  555 atgatatcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacg 653  Q
            ||| ||||||| |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||||||| | ||||| |||||| |||||    
T  5636302 --------aaatgtcaaataattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaattacttata-tttgcaaggacg 5636392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 34454756 - 34454861
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||||| ||    
T  34454756 caaaagtcaaatgattaatatttgcaggggcagattgaaagaattagtaacttcagggacgaaaattcaaatgatctata-tttgcagggatgaaagtcc 34454854  T
Q  661 tatttaa 667  Q
    |||||||    
T  34454855 tatttaa 34454861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 355 - 499
Target Start/End: Original strand, 19980036 - 19980180
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| |  | ||||||||| |||||||| ||||  || |||||||||||| ||| ||||||| | |||||||||| |||||    
T  19980036 aaatattaatcatttgaaaaatggtcataattacatctgattagtaacttcaaggacgaaaattcaaatgatctatatttggaaggacgaaagacctatt 19980135  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    ||||  |||||| | ||||||||||||||||||||| ||||||||    
T  19980136 taagcgaaccacctcgcccaatcatcacttgccacatgggcacca 19980180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 355 - 559
Target Start/End: Complemental strand, 47082145 - 47081941
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| |||||||||||| ||||||||| |||| ||| ||||| || |||||||||||| | | ||||||||||||||||||||  ||||    
T  47082145 aaatattaatcatttgaaaaatgattctaattacatctgattaataacttcagggacgaaaattcaaatgaactatatttgcagggacgaaagacttatt 47082046  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaa 554  Q
    |||  ||||||  | || ||||||||| || |||||  | ||||| || | |||| |||||||||||||||       |||||||| || ||||| ||||    
T  47082045 taaaccaaccaactcgctcaatcatcatttaccacattgacaccacgtcgctaatgacaacccacctcagcaaaaaaacctaattaagaccaaaaatcaa 47081946  T
Q  555 atgat 559  Q
    |||||    
T  47081945 atgat 47081941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 26825899 - 26825724
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    |||| |||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||| | |||||||||  |||||| | ||||||||||||||    
T  26825899 attatatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaatacctatttaagcaaaccacctcgcccaatcatcact 26825800  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| || | |||| ||||| |||||||||        ||||||| || |||||||||||||||    
T  26825799 tgccacatgggcaccacgtcgctaatgacaactcacctcagcaaaaaaatctaattaagaccaaaagtcaaatgat 26825724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 563 - 667
Target Start/End: Original strand, 25049438 - 25049542
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacct 661  Q
    |||||||||||||||||||||||||||| || |||| ||  ||||||||||||||||| ||||||||||||||  |||| ||| ||||||||||||||||    
T  25049438 aaaagtcaaatgattaaattttgcagtggcatattggaaagattagtaacttcagggagaaaaattcaaatgacctata-tttacagggacgaaagacct 25049536  T
Q  662 atttaa 667  Q
    ||||||    
T  25049537 atttaa 25049542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 387 - 559
Target Start/End: Complemental strand, 37563620 - 37563448
Alignment:
Q  387 acatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttgc 486  Q
    |||||| |||||||| ||||| || ||||||||||||   | ||||||||||||| ||||||  ||||||||  |||||| | |||||||||||||||||    
T  37563620 acatctgattagtaacttcagggacgaaaattcaaatgccctatatttgcagggatgaaagacttatttaagcaaaccacctcgcccaatcatcacttgc 37563521  T
Q  487 cacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    |||| |||||||| || | |||| ||| |||||||||||        ||||||| || |||||||||||||||    
T  37563520 cacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgat 37563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 355 - 521
Target Start/End: Original strand, 47121364 - 47121529
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    ||||||||||||||| ||||||| | || ||||||| | ||||| || ||||| || |||||||||||| | | ||||||||||||| |||||  |||||    
T  47121364 aaatattaattatttgaaaaatggtcctaattacatttgattag-aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaaggcctatt 47121462  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacct 521  Q
    |||| ||||||| | | ||||||||||| ||||||| |||||||| || | ||||  ||||||||||    
T  47121463 taagccaaccacttcgtccaatcatcacctgccacatgggcaccacgtcgttaatggcaacccacct 47121529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 26825906 - 26826011
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||||||| |||| |||||||| |||| |||||||||||||  |||| |||||||| ||||||||||    
T  26825906 caaaagtcaaatgattaatatttgcaggggcagattgaaaggattaataacttcatggacgaaaattcaaatgacatata-tttgcaggaacgaaagacc 26826004  T
Q  661 tatttaa 667  Q
    |||||||    
T  26826005 tatttaa 26826011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 43938163 - 43937988
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||| | |||||||| ||||| || |||||||||||| | | ||||||| ||||| |||| |||||||||||  |||||| | || |||||||||||    
T  43938163 attacatatgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaatatctatttaagcaaaccacctcgctcaatcatcact 43938064  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |  ||||| || | |||| ||| |||||||||||        |||||||||| |||||||||||||||    
T  43938063 tgccacatgtacaccacgtcgttaatgacagcccacctcagcaaaaaaatctaattatgaccaaaagtcaaatgat 43937988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 43938170 - 43938275
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||| ||||||||||| | ||||| |||||| |||||||||||     
T  43938170 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcttata-tttgcaaggacgaaagaca 43938268  T
Q  661 tatttaa 667  Q
    |||||||    
T  43938269 tatttaa 43938275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 499
Target Start/End: Complemental strand, 5280569 - 5280425
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || || |||||| |||||||||||||  || ||||||||||||  || ||||| |  || |||||||| |||||    
T  5280569 aaatattaatcatttgaaaaatggtcctaatcacatctgattagtaagttcaaggacgaaaattcaaatggtctatattcgttggaacgaaagacctatt 5280470  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    |||| ||||||  | ||||||||||||||||||||| ||| ||||    
T  5280469 taaggcaaccatctcgcccaatcatcacttgccacatgggtacca 5280425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 568 - 667
Target Start/End: Original strand, 5280553 - 5280652
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||| ||||||||| |||| |||||||||||||||||| |||||||||||||  |||| |||||| |||| |||||||||||||    
T  5280553 tcaaatgattaatatttgcaatgacagattcaaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcaaggacaaaagacctattta 5280651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 583 - 669
Target Start/End: Original strand, 19980190 - 19980276
Alignment:
Q  583 ttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaaac 669  Q
    |||||||| ||||||||||  ||||||||||||| |||||||||||||||||| ||||| ||||||| || |||||||||||||||||    
T  19980190 ttgcagtggcagattgaaatgattagtaacttcaaggacaaaaattcaaatgacttata-tttgcagtgatgaaagacctatttaaac 19980276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 12928315 - 12928420
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacc 660  Q
    |||||||||||||||| |  ||||||| | |||||| |||| ||||||||||||| |||| |||||||||||| | |||| ||||||||||| |||||||    
T  12928315 caaaagtcaaatgattgatatttgcagcggcagattaaaaggattagtaacttcaaggacgaaaattcaaatggtctata-tttgcagggacaaaagacc 12928413  T
Q  661 tatttaa 667  Q
    |||||||    
T  12928414 tatttaa 12928420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 669
Target Start/End: Complemental strand, 20947295 - 20947194
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||| |||| ||||||| ||| ||||||||||||| |||| |||||||||||||  |||| |||| ||||||||||||||||||||    
T  20947295 tcaaatgattaatatttgtagtggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctata-tttgaagggacgaaagacctattta 20947197  T
Q  667 aac 669  Q
    |||    
T  20947196 aac 20947194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 26825738 - 26825633
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||  |||||||||||||||||| |||||||||||||  |||| ||| ||||||||||||||     
T  26825738 caaaagtcaaatgattaatctttgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatgacctata-tttacagggacgaaagaca 26825640  T
Q  661 tatttaa 667  Q
    |||||||    
T  26825639 tatttaa 26825633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 562 - 659
Target Start/End: Original strand, 12931014 - 12931111
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgattatattttgcagggacgaaagac 659  Q
    ||||||||||||||||||  ||||||  | ||||||| ||| |||||||||||||||||| |||||||||||||  |   ||||||||||||||||||    
T  12931014 caaaagtcaaatgattaatatttgcatgggcagattggaaggattagtaacttcagggacgaaaattcaaatgaccaatatttgcagggacgaaagac 12931111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 393 - 458
Target Start/End: Original strand, 47121595 - 47121660
Alignment:
Q  393 tattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    ||||||||| |||||||| ||||||||||||  ||||||||||||||||||||||| |||||||||    
T  47121595 tattagtaacttcagagacgaaaattcaaatggtcaatatttgcagggacgaaagacctatttaag 47121660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 667
Target Start/End: Original strand, 27558126 - 27558233
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||  |||||| || || | || ||| ||||||||||||  |||| |||||||||||||  |||| |||||||||||||||||    
T  27558126 atcaaaagtcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctata-tttgcagggacgaaaga 27558224  T
Q  659 cctatttaa 667  Q
    |||||||||    
T  27558225 cctatttaa 27558233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 43938002 - 43937897
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||  |||||||||||||  |||| ||| || |||||||||||     
T  43938002 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctata-tttacaaggacgaaagaca 43937904  T
Q  661 tatttaa 667  Q
    |||||||    
T  43937903 tatttaa 43937897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 12929530 - 12929635
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgattatattttgcagggacgaaagacct 661  Q
    ||||||||||||||||||  ||||||  | ||||||| ||| |||||| |||||||||||  ||||||||||||  |   |||||||||||||||||| |    
T  12929530 caaaagtcaaatgattaatatttgcacgggcagattggaaggattagtcacttcagggacggaaattcaaatgaccaatatttgcagggacgaaagacat 12929629  T
Q  662 atttaa 667  Q
    ||||||    
T  12929630 atttaa 12929635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 560 - 667
Target Start/End: Complemental strand, 34454594 - 34454487
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||  ||||||| |  |||||| ||| |||||||||||||  ||| |||||||||||||  |||| |||||||||||||| ||    
T  34454594 atcaaaagtcaaatgattaatatttgcaggggtagattggaaggattagtaacttcaaagacgaaaattcaaatgacctata-tttgcagggacgaagga 34454496  T
Q  659 cctatttaa 667  Q
    | |||||||    
T  34454495 catatttaa 34454487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 379 - 489
Target Start/End: Complemental strand, 12928313 - 12928203
Alignment:
Q  379 ttctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatca 478  Q
    |||| ||||||| | |||||| | ||||| || |||||||||||| |   ||||||||||||  |||||| |||||||||  |||||| | |||||||||    
T  12928313 ttctaattacatgtgattagtgacttcagggacgaaaattcaaatgacttatatttgcaggggtgaaagacctatttaagaaaaccacctcgcccaatca 12928214  T
Q  479 tcacttgccac 489  Q
    |||||||||||    
T  12928213 tcacttgccac 12928203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 37563462 - 37563357
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||  ||| |||||||| ||||||||| ||||||||||| |  |||| ||||||||||| ||||||     
T  37563462 caaaagtcaaatgattaatatttgcaggggcagattagaaggattagtaaattcagggacgaaaattcaaatggcctata-tttgcagggacaaaagaca 37563364  T
Q  661 tatttaa 667  Q
    |||||||    
T  37563363 tatttaa 37563357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 37563630 - 37563735
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacc 660  Q
    ||||||||||| ||||||  ||||||| | || |||| ||| |||||||||||||||||| ||||||||||||   |||||||  ||||||||||||||     
T  37563630 caaaagtcaaaagattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatggcctatattta-cagggacgaaagaca 37563728  T
Q  661 tatttaa 667  Q
    |||||||    
T  37563729 tatttaa 37563735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 604 - 669
Target Start/End: Original strand, 44545913 - 44545978
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaaac 669  Q
    |||||||||||||||||| ||||||||||||| || || |||||| |||||||||||||||||||||    
T  44545913 attagtaacttcagggacgaaaattcaaatgacttgta-tttgcatggacgaaagacctatttaaac 44545978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 575 - 667
Target Start/End: Complemental strand, 44545690 - 44545598
Alignment:
Q  575 attaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||| ||||||||| | ||||| |||| |||||||||||||||| || |||||||||||||  |||| ||||||| ||| ||||||||||||||    
T  44545690 attatattttgcagcggcagatcgaaataattagtaacttcaggaacgaaaattcaaatgacctata-tttgcagagacaaaagacctatttaa 44545598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 27557973 - 27558036
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||| |||| |||||||||||||  ||||||| |||||||||||||||||||||||    
T  27557973 attagtaacttcaaggacgaaaattcaaatgacctatattt-gcagggacgaaagacctatttaa 27558036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 34454739 - 34454676
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  34454739 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 34454676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 592 - 667
Target Start/End: Complemental strand, 47081925 - 47081850
Alignment:
Q  592 cagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||| |||||||||||||| ||  |||||||||||||  |||| |||| |||||||||||||||||||||    
T  47081925 cagattgaaaggattagtaacttcagagatgaaaattcaaatgacatata-tttgaagggacgaaagacctatttaa 47081850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 384 - 458
Target Start/End: Complemental strand, 12929523 - 12929449
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    ||||||||| |||||||| ||||  || |||||||||||| | | ||||||||||||| |||||| |||||||||    
T  12929523 attacatctgattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 12929449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 448
Target Start/End: Original strand, 12931056 - 12931110
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaaga 448  Q
    |||||||| ||||| || |||||||||||| | ||||||||||||||||||||||    
T  12931056 attagtaacttcagggacgaaaattcaaatgaccaatatttgcagggacgaaaga 12931110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 562 - 616
Target Start/End: Original strand, 23191130 - 23191184
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttca 616  Q
    ||||||||||||||||||  ||||||||| ||||||| |||||||||||| ||||    
T  23191130 caaaagtcaaatgattaatatttgcagtggcagattggaagaattagtaaattca 23191184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 604 - 669
Target Start/End: Complemental strand, 47082106 - 47082041
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaaac 669  Q
    |||| ||||||||||||| |||||||||||||  ||||||| ||||||||||||||| |||||||||    
T  47082106 attaataacttcagggacgaaaattcaaatgaactatattt-gcagggacgaaagacttatttaaac 47082041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 780 - 825
Target Start/End: Original strand, 6562021 - 6562066
Alignment:
Q  780 ctctgaatgctaagtaaattatttcaccacacggaagctaatctcc 825  Q
    |||||||||||||| |||||||| |||||||| |||||||||||||    
T  6562021 ctctgaatgctaagcaaattattccaccacaccgaagctaatctcc 6562066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 635
Target Start/End: Complemental strand, 15827829 - 15827756
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    ||||||||||||| ||||  ||||||||| ||||||||||| |||| ||||||||   || |||||||||||||    
T  15827829 caaaagtcaaatggttaatatttgcagtggcagattgaaaggattaataacttcaaaaacgaaaattcaaatga 15827756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 667
Target Start/End: Complemental strand, 5280374 - 5280275
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacctattta 666  Q
    |||||| |||||  ||| ||||| ||||||| ||| ||||||||||||||  || ||||||||||| |  |||| |||||||||||||||||| ||||||    
T  5280374 tcaaattattaatatttacagtggcagattggaaggattagtaacttcagtaacgaaaattcaaatggcctata-tttgcagggacgaaagacttattta 5280276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 12928298 - 12928235
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||| ||||||||||| ||||||||||||| ||||| |||||||||  |||||||||||||||    
T  12928298 attagtgacttcagggacgaaaattcaaatgacttata-tttgcaggggtgaaagacctatttaa 12928235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 12929513 - 12929450
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||| |||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  12929513 attagtaacttcatggacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 12929450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 15827980 - 15827917
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| ||||||||||| |  |||| |||||||||||||||||| |||||||    
T  15827980 attagtaacttcagggacgaaaattcaaatggcctata-tttgcagggacgaaagacatatttaa 15827917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 19980075 - 19980138
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||| |||| |||||||||||||| |||| |||| | |||||||||||||||||||    
T  19980075 attagtaacttcaaggacgaaaattcaaatgatctata-tttggaaggacgaaagacctatttaa 19980138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 26825889 - 26825826
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||| |||| ||||||||||    
T  26825889 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaatacctatttaa 26825826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 667
Target Start/End: Complemental strand, 27557950 - 27557851
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||| || || | || |||||||| |||||||| |||| |||||||||||||  |||| ||| |||||||||||||||| ||||    
T  27557950 tcaaatgattaatatttgcaatggcaaaatggaagaattattaacttcaaggacgaaaattcaaatgacctata-tttacagggacgaaagacctgttta 27557852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 34454798 - 34454862
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| ||| ||||||||||||| |||||  |||||||||    
T  34454798 attagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagtcctatttaag 34454862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 47081913 - 47081849
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| |||||||| |||||||||||| |   ||||||| |||||||||||| |||||||||    
T  47081913 attagtaacttcagagatgaaaattcaaatgacatatatttgaagggacgaaagacctatttaag 47081849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 412 - 458
Target Start/End: Original strand, 27558188 - 27558234
Alignment:
Q  412 gaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||||||| | | |||||||||||||||||||| |||||||||    
T  27558188 gaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 27558234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 355
Target Start/End: Original strand, 43937908 - 43937937
Alignment:
Q  326 tttcgtccttgtaaatataggtcatttgaa 355  Q
    ||||||||||||||||||||||||||||||    
T  43937908 tttcgtccttgtaaatataggtcatttgaa 43937937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 2e-42; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 355 - 667
Target Start/End: Complemental strand, 37678146 - 37677851
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| |||| ||||||||| |||||||| ||||| || |||||||||||| | | |||||||||||||||||||| |||||    
T  37678146 aaatattaatcatttgaaaaatggttctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatt 37678047  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaa 554  Q
    |||| ||||||| | ||||||||||||||||||||| |||||||| |    |||| | | ||||||| |||       ||||||||||| |||||         
T  37678046 taagccaaccacctcgcccaatcatcacttgccacatgggcaccacgccactaatgatagcccaccttagcaaaaaaacctaattatgaccaaaa----- 37677952  T
Q  555 atgatatcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacg 653  Q
                |||||||||||||||||||||||| ||||| | ||| |||||||||||||||||| |||||||||||||  |||| |||||||||| |    
T  37677951 ------------gtcaaatgattaaattttgcagtggcagatcggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggaag 37677865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 355 - 667
Target Start/End: Original strand, 8287018 - 8287314
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||| |||||||| |||||    
T  8287018 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatt 8287117  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc-nnnnnnncctaattatgatcaaaagtca 553  Q
    |||| ||||| | | ||||||||||| ||||||||| |||||||| |||| |||| ||| |||||||||||        |||||| | || |||||||||    
T  8287118 taagccaaccgcctcgcccaatcatcccttgccacatgggcaccacgttgctaatgacagcccacctcagcaaaaaaaacctaatcaggaccaaaagtca 8287217  T
Q  554 aatgatatcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggac 652  Q
    |                 ||||||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||||||| |  |||| |||||||||||    
T  8287218 a-----------------atgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctata-tttgcagggac 8287299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 355 - 499
Target Start/End: Original strand, 27813135 - 27813278
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    ||||| |||| |||| ||||||| |||| ||||||||| ||||| |  ||||| || |||||||||||| ||| |||||||||||||||||||| |||||    
T  27813135 aaatactaatcatttgaaaaatggttctaattacatctgattag-atcttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacctatt 27813233  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    |||| ||||||| ||||||| ||||||||||||||| ||||||||    
T  27813234 taagccaaccaccttgcccagtcatcacttgccacatgggcacca 27813278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 357 - 490
Target Start/End: Original strand, 48507502 - 48507635
Alignment:
Q  357 atattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctattta 456  Q
    |||||||| |||| ||| ||| | || |||||| || |||||||| ||||| || |||||||||||| |   ||||||||||||||||||||||||||||    
T  48507502 atattaataatttgaaatatggtcctaattacacctgattagtaacttcagggacgaaaattcaaatgacttatatttgcagggacgaaagatctattta 48507601  T
Q  457 agtcaaccacattgcccaatcatcacttgccaca 490  Q
    |||||||||| || ||||||||||||||||||||    
T  48507602 agtcaaccaccttacccaatcatcacttgccaca 48507635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 13872345 - 13872450
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||     
T  13872345 caaaagtcaaatgattaatatttgcaggggcagattggaagaattagtaacttcagggacaaaaattcaaatagactata-tttgcagggacgaaagaca 13872443  T
Q  661 tatttaa 667  Q
    |||||||    
T  13872444 tatttaa 13872450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 54961546 - 54961721
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||| | | | ||||||| ||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  54961546 attacatctgattagtaacttcagtgatgaaaattcaagtgacctatatttggagggatgaaagacctatttaagcaaaccacctagcccaatcatcact 54961645  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| || | |||| ||||||||||||| |       |||||||| || |||||||||||||||    
T  54961646 tgccacatgggcaccacgtcgctaatgacaacccacctcaccaaaaaaacctaattaggagcaaaagtcaaatgat 54961721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 525
Target Start/End: Original strand, 12691521 - 12691662
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| ||||||  ||||||||  |||||| | ||||||||||||||    
T  12691521 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacttatttaagcaaaccacctcgcccaatcatcact 12691620  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||||| |||||||| || | |||| ||| |||||||||||    
T  12691621 tgccacatgggcaccacgtcgctaatgacagcccacctcagc 12691662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 47862267 - 47862442
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  47862267 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgcccaatcatcact 47862366  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| ||| |||| ||   |||| ||| |||||||||||        ||||||| || |||||||||||||||    
T  47862367 tgccacatgggtaccacgtcactaatgacatcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgat 47862442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 53559502 - 53559677
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||| ||||  |||||| | ||||||||||||||    
T  53559502 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatgtaagcaaaccacctcgcccaatcatcact 53559601  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| ||   |||| ||| ||||||| |||       |||||||| || |||||||||||||||    
T  53559602 tgccacatgggcaccacgtcactaatgacagcccaccttagcaaaaaaacctaattaggaccaaaagtcaaatgat 53559677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 384 - 681
Target Start/End: Complemental strand, 22250002 - 22249722
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| ||||||  ||||||||  |||||| |  |||||||||||||    
T  22250002 attacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacttatttaagcaaaccacctcacccaatcatcact 22249903  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgatatcaaaagtcaaatgattaaattt 583  Q
    ||||||| |||||||| |  | |||| ||| ||||||||| |       |||||||| || ||||                 ||||||||||||||  ||    
T  22249902 tgccacatgggcaccacgccgctaatgacagcccacctcaacaaaaaaacctaattaggaccaaa-----------------agtcaaatgattaatatt 22249820  T
Q  584 tgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaaacattttttatata 681  Q
    ||||| | ||||||||||| ||||||||||||| |||| |||||||||||||| |||| ||||||||||||||| || ||||||| | |||||| ||||    
T  22249819 tgcaggggcagattgaaaggattagtaacttcatggacgaaaattcaaatgatctata-tttgcagggacgaaaaacatatttaagccttttttttata 22249722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 562 - 674
Target Start/End: Original strand, 48507693 - 48507805
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||||||||  ||| ||||||| ||| |||||||||||||| ||| |||||||||||||  |||| |||| ||||||||||||||    
T  48507693 caaaagtcaaatgattaaattttgttgtggcagattggaaggattagtaacttcagagacgaaaattcaaatgacctata-tttgtagggacgaaagacc 48507791  T
Q  661 tatttaaacatttt 674  Q
    ||||||||| ||||    
T  48507792 tatttaaacctttt 48507805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 355 - 499
Target Start/End: Complemental strand, 35730959 - 35730815
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||  | || ||||||||| |||||||| ||||  || |||||||||||| | | ||||||||| |||||||||| |||||    
T  35730959 aaatattaatcatttgaaaaatagtcctaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcatggacgaaagaactatt 35730860  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    |||| ||||||| |  |||||||||||||||||||| || |||||    
T  35730859 taagccaaccacctcacccaatcatcacttgccacatggacacca 35730815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 667
Target Start/End: Complemental strand, 47980795 - 47980688
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||  ||||||| || |||||| ||| || ||||||||||||||| |||||||||||| | |||| |||||||||||||||||    
T  47980795 atcaaaagtcaaatgattaatatttgcagggatagattggaaggatcagtaacttcagggacgaaaattcaaatggtctata-tttgcagggacgaaaga 47980697  T
Q  659 cctatttaa 667  Q
    |||||||||    
T  47980696 cctatttaa 47980688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 667
Target Start/End: Complemental strand, 54961541 - 54961434
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||  ||||||| | || |||| ||| |||||||||||||||||| |||||||||||| | |||| |||||||||||||||||    
T  54961541 atcaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctata-tttgcagggacgaaaga 54961443  T
Q  659 cctatttaa 667  Q
    |||||||||    
T  54961442 cctatttaa 54961434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 355 - 559
Target Start/End: Complemental strand, 19916954 - 19916750
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| |  | ||||||||| |||||||| ||||| || ||||||||| || |   ||| |||| || |||||||| |||||    
T  19916954 aaatattaatcatttgaaaaatggtcataattacatctgattagtaatttcagggacgaaaattcatatgacttataattgctggaacgaaagacctatt 19916855  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaa 554  Q
    |||| ||||||| | ||||||||||||||||||||| ||||||||  | | |||| |||||||| || |||       |||||||| || ||||||||||    
T  19916854 taagccaaccacctcgcccaatcatcacttgccacatgggcaccacatcgctaatgacaacccaacttagcaaaaaaacctaattaggaccaaaagtcaa 19916755  T
Q  555 atgat 559  Q
    |||||    
T  19916754 atgat 19916750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 384 - 523
Target Start/End: Complemental strand, 20086706 - 20086567
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||  | | ||||||||||||| |||||| |||||||||  || ||| | ||||||||||||||    
T  20086706 attacatctgattagtaacttcagggacgaaaattcaaaggacctatatttgcagggatgaaagacctatttaagcaaatcacctcgcccaatcatcact 20086607  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctca 523  Q
    ||||||| |||||||| || | |||| ||| |||||||||    
T  20086606 tgccacatgggcaccacgtcgctaatgacagcccacctca 20086567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 12691681 - 12691786
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | | ||||| ||| ||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||     
T  12691681 caaaagtcaaatgattaatatttgcaggggcggattggaaggattagtaacttcagggacaaaaattcaaatgacctata-tttgcagggacgaaagaca 12691779  T
Q  661 tatttaa 667  Q
    |||||||    
T  12691780 tatttaa 12691786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 568 - 667
Target Start/End: Original strand, 37678130 - 37678229
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  ||||||||| ||||||| ||| |||||||||||||||||| |||||| |||| | ||||| |||||||||||||||||||||||||    
T  37678130 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaatttaaatggcttata-tttgcagggacgaaagacctattta 37678228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 355 - 525
Target Start/End: Complemental strand, 489482 - 489311
Alignment:
Q  355 aaatattaattattt-aaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctat 453  Q
    |||||||||| |||| |||||||| |  | ||||||| | |||||||| || || || | |||||||||  | | |||||||||||||||||||| ||||    
T  489482 aaatattaatcatttgaaaaaatggtcataattacatatgattagtaaatttagggacggaaattcaaacgacctatatttgcagggacgaaagacctat 489383  T
Q  454 ttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||| ||||||| |  |||||||||||||||||| | |||||||| || | |||  |||||||||||||||    
T  489382 ttaagccaaccacctcacccaatcatcacttgccaaatgggcaccacgtcgctaacgacaacccacctcagc 489311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 355 - 525
Target Start/End: Complemental strand, 515274 - 515103
Alignment:
Q  355 aaatattaattattt-aaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctat 453  Q
    |||||||||| |||| |||||||| |  | ||||||| | |||||||| || || || | |||||||||  | | |||||||||||||||||||| ||||    
T  515274 aaatattaatcatttgaaaaaatggtcataattacatatgattagtaaatttagggacggaaattcaaacgacctatatttgcagggacgaaagacctat 515175  T
Q  454 ttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||| ||||||| |  |||||||||||||||||| | |||||||| || | |||  |||||||||||||||    
T  515174 ttaagccaaccacctcacccaatcatcacttgccaaatgggcaccacgtcgctaacgacaacccacctcagc 515103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 12691514 - 12691409
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  |||| || ||||||||| ||| |||||||||||||||||| ||||||||||| |  |||| |||||| ||||||||||||    
T  12691514 caaaagtcaaatgattaatatttgtagggacagattggaaggattagtaacttcagggacgaaaattcaaatggcctata-tttgcatggacgaaagacc 12691416  T
Q  661 tatttaa 667  Q
    |||||||    
T  12691415 tatttaa 12691409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 13872338 - 13872163
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||  ||  ||||||||||| |   ||||||||||||| |||||| ||||||||  ||||||| |  |||||||||||||    
T  13872338 attacatctgattagtaacttcaaggataaaaattcaaatgacatatatttgcagggatgaaagacctatttaaaccaaccacttcacccaatcatcact 13872239  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| || | |||| ||| |||||||||||        ||||||| || |||||||||||||||    
T  13872238 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgat 13872163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 54961707 - 54961812
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||| | | | ||||||||||| |||||||||||||||||| |||||||||||||  |||| ||||||||||||||||||     
T  54961707 caaaagtcaaatgattaatatttacgggggcagattgaaaggattagtaacttcagggactaaaattcaaatgacctata-tttgcagggacgaaagaca 54961805  T
Q  661 tatttaa 667  Q
    |||||||    
T  54961806 tatttaa 54961812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 562 - 669
Target Start/End: Complemental strand, 19916764 - 19916657
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||||| ||||||| ||| |||||||||||||||| | |||||| ||||||  |||| ||||||||||||||||||     
T  19916764 caaaagtcaaatgattaatatttgcagtggcagattggaaggattagtaacttcaggggcgaaaatttaaatgacctata-tttgcagggacgaaagaca 19916666  T
Q  661 tatttaaac 669  Q
    ||| |||||    
T  19916665 tatctaaac 19916657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 568 - 667
Target Start/End: Original strand, 50246140 - 50246239
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  ||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||  |||| |||||||||| |||||| |||||||    
T  50246140 tcaaatgattaatatttgcagtgacagattggaaggattagtaacttcatggacgaaaattcaaatgacctata-tttgcagggatgaaagatctattta 50246238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 384 - 499
Target Start/End: Original strand, 33294259 - 33294374
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||| | || |||||||||||| | | ||||||||||||| ||||||  ||||||||  |||||| | ||| ||||||||||    
T  33294259 attacatctgattagtaacttccgggacgaaaattcaaatgacctatatttgcagggatgaaagacatatttaagcaaaccacctcgcctaatcatcact 33294358  T
Q  484 tgccacacgggcacca 499  Q
    ||||||| ||||||||    
T  33294359 tgccacatgggcacca 33294374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 562 - 676
Target Start/End: Original strand, 53559663 - 53559777
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||  |||||||||||||||||| ||||||||||| |  |||| ||||||||||||||||||     
T  53559663 caaaagtcaaatgattaatatttgcaggggcagattggaacgattagtaacttcagggacgaaaattcaaatggcctata-tttgcagggacgaaagaca 53559761  T
Q  661 tatttaaacatttttt 676  Q
    ||||||| | ||||||    
T  53559762 tatttaagcctttttt 53559777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 669
Target Start/End: Original strand, 35730943 - 35731044
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||| ||||| | || ||| |||||||||||||||||| |||||||||||||  |||| ||||||||||||||||||||| |||    
T  35730943 tcaaatgattaatatttgcaatgacataatggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacgaaagacctactta 35731041  T
Q  667 aac 669  Q
    |||    
T  35731042 aac 35731044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 563 - 667
Target Start/End: Original strand, 22250010 - 22250114
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacct 661  Q
    |||||||||||||||||  ||||||| | || |||| |||||||||||| ||||||||| ||||||||||| |  |||| |||||||||||||||||| |    
T  22250010 aaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctata-tttgcagggacgaaagacat 22250108  T
Q  662 atttaa 667  Q
    ||||||    
T  22250109 atttaa 22250114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 27813329 - 27813433
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgattatattttgcagggacgaaagacct 661  Q
    |||||||||| | |||||||||||||||| ||||||| ||| |||||||||||||||| |  |||||||||||    ||| ||||||||||||||||| |    
T  27813329 caaaagtcaagtaattaaattttgcagtggcagattggaaggattagtaacttcaggggcggaaattcaaatg-gcgtatattgcagggacgaaagactt 27813427  T
Q  662 atttaa 667  Q
    ||||||    
T  27813428 atttaa 27813433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 563 - 667
Target Start/End: Complemental strand, 47862259 - 47862155
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacct 661  Q
    ||||||||||||||||   ||||||| | ||||||| ||| |||||||||||||| ||| |||||||||||||  |||| |||||||||| |||||||||    
T  47862259 aaaagtcaaatgattagtatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatgacatata-tttgcagggatgaaagacct 47862161  T
Q  662 atttaa 667  Q
    ||||||    
T  47862160 atttaa 47862155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 563 - 635
Target Start/End: Complemental strand, 20086544 - 20086472
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    |||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||| |||||||||||||    
T  20086544 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatga 20086472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 384 - 499
Target Start/End: Original strand, 47980800 - 47980915
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||  || |||||||||||| | |  |||||||||||| |||||| |||||||||  || ||| | ||||||||||||||    
T  47980800 attacatctgattagtaacttcatggacgaaaattcaaatgacctgtatttgcagggatgaaagacctatttaagcaaatcacctcgcccaatcatcact 47980899  T
Q  484 tgccacacgggcacca 499  Q
    |||||||  |||||||    
T  47980900 tgccacataggcacca 47980915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 563 - 669
Target Start/End: Complemental strand, 50245964 - 50245858
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacct 661  Q
    |||||||||||||||||  ||||||||| ||||||| ||  ||||||||||||| |||  |||||||||||||  |||| ||| ||||||||||||| ||    
T  50245964 aaaagtcaaatgattaatatttgcagtggcagattggaatgattagtaacttcatggatgaaaattcaaatgacctata-tttacagggacgaaagatct 50245866  T
Q  662 atttaaac 669  Q
    ||||||||    
T  50245865 atttaaac 50245858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 384 - 490
Target Start/End: Original strand, 34238585 - 34238691
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | | ||||||||||| |||| | |||||||||  || ||| | ||||||||||||||    
T  34238585 attacatctgattagtaacttcagggacgaaaattcaaatgacctaaatttgcagggatgaaaaacctatttaagcaaatcacctcgcccaatcatcact 34238684  T
Q  484 tgccaca 490  Q
    |||||||    
T  34238685 tgccaca 34238691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 47981912 - 47982017
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||| ||||||||||||  ||||||| | ||||||| ||| |||||||||||||| ||| ||||||||||| |  |||| ||||||||||||||||||     
T  47981912 caaaaatcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatagtctata-tttgcagggacgaaagaca 47982010  T
Q  661 tatttaa 667  Q
    |||||||    
T  47982011 tatttaa 47982017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 666
Target Start/End: Complemental strand, 34238578 - 34238474
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||||||| |||||||||||||| ||| ||||||||||| |  |||| ||| || ||||||||||||    
T  34238578 caaaagtcaaatgattaatatttgcaggggcatattgaaaggattagtaacttcagagacgaaaattcaaatagcctata-tttacaaggacgaaagacc 34238480  T
Q  661 tattta 666  Q
    ||||||    
T  34238479 tattta 34238474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 499
Target Start/End: Complemental strand, 50246156 - 50246011
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaa-gaaaattcaaattatcaatatttgcagggacgaaagatctat 453  Q
    |||||||||| |||| ||||||| || | ||| ||| | |||||||| ||||| | | |||||||||||| |   ||| || ||||||||||||| ||||    
T  50246156 aaatattaatcatttgaaaaatggttttaattgcatttgattagtaacttcaggggacgaaaattcaaatgacttataattacagggacgaaagacctat 50246057  T
Q  454 ttaagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    ||||| ||||||| | |||||||||||||||| | || ||||||||    
T  50246056 ttaagccaaccacctcgcccaatcatcacttgtcgcatgggcacca 50246011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 568 - 667
Target Start/End: Original strand, 19916938 - 19917037
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  ||||||||| ||||||||||  |||||||||||||  ||| |||||| ||||||  |||| ||||||||||||||| |||||||||    
T  19916938 tcaaatgattaatatttgcagtggcagattgaaatgattagtaacttcaaagacgaaaatttaaatgacctata-tttgcagggacgaaaaacctattta 19917036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 386 - 559
Target Start/End: Original strand, 20601064 - 20601236
Alignment:
Q  386 tacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttg 485  Q
    |||||||||||| ||| ||||| || |||||||| ||| | | ||| || || ||||||||||  |||||||| ||||||  ||| ||||||||||||||    
T  20601064 tacatcttattaataacttcagggacgaaaattcgaatgacctataattacaaggacgaaagacatatttaagccaaccatcttgtccaatcatcacttg 20601163  T
Q  486 ccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||| ||| || | || | |||| |||||  ||||||||        ||||||||||||||||||||||||||    
T  20601164 ccacatgggtactacgtcgctaatgacaactaacctcagcaaaaaaa-ctaattatgatcaaaagtcaaatgat 20601236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 48507539 - 48507602
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  48507539 attagtaacttcagggacgaaaattcaaatgacttata-tttgcagggacgaaagatctatttaa 48507602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 597 - 667
Target Start/End: Complemental strand, 19740933 - 19740863
Alignment:
Q  597 tgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||| |||||||||||||||||| |||||||||||||  |||| |||||| |||||||||||||||||||    
T  19740933 tgaaaggattagtaacttcagggacgaaaattcaaatgacatata-tttgcaaggacgaaagacctatttaa 19740863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 33294419 - 33294524
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaa-tgattatattttgcagggacgaaagacc 660  Q
    ||||| ||||||||||||  ||||||| | ||||| | ||| |||||||||||||||||| |||||||||| ||  |||| |||||||||| |||||||     
T  33294419 caaaaatcaaatgattaatatttgcaggggcagatcggaaggattagtaacttcagggacgaaaattcaaattgcctata-tttgcagggaggaaagaca 33294517  T
Q  661 tatttaa 667  Q
    |||||||    
T  33294518 tatttaa 33294524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 568 - 669
Target Start/End: Complemental strand, 45199229 - 45199128
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||| || || |||||||| |||||||||||||| ||| |||||||| |||| ||||| ||||| |||||||||||||  ||||    
T  45199229 tcaaatgattaatatttgcactgtcatattgaaaggattagtaacttcagagacgaaaattcagatgatttata-tttgcggggacgaaagaccctttta 45199131  T
Q  667 aac 669  Q
    |||    
T  45199130 aac 45199128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 667
Target Start/End: Complemental strand, 8287034 - 8286935
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||| || || | || ||| |||| ||||||||| ||| ||||||||||||  |||||||| ||||||||||||||||||||||    
T  8287034 tcaaatgattaatatttgcaatggcaaaatggaaggattattaacttcagagacgaaaattcaaatggcttatattt-gcagggacgaaagacctattta 8286936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 667
Target Start/End: Original strand, 27813181 - 27813236
Alignment:
Q  612 cttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||    
T  27813181 cttcagggacgaaaattcaaatgatctatattt-gcagggacgaaagacctatttaa 27813236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 47862277 - 47862340
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  47862277 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 47862340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 47981954 - 47982018
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| |||||||| ||||||||||||  || ||||||||||||||||||||  ||||||||    
T  47981954 attagtaacttcagagacgaaaattcaaatagtctatatttgcagggacgaaagacatatttaag 47982018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 54961497 - 54961433
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || ||||||||||||  || |||||||||||||||||||| |||||||||    
T  54961497 attagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaag 54961433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 562 - 633
Target Start/End: Complemental strand, 33294252 - 33294181
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat 633  Q
    ||||||| ||||||||||  ||||||| | || |||| ||| ||||||||||||| ||||||||||||||||    
T  33294252 caaaagttaaatgattaatatttgcaggggcaaattggaaggattagtaacttcatggacaaaaattcaaat 33294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 394 - 457
Target Start/End: Original strand, 48507735 - 48507798
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaa 457  Q
    |||||||| |||||||| |||||||||||| | | ||||||| |||||||||||| ||||||||    
T  48507735 attagtaacttcagagacgaaaattcaaatgacctatatttgtagggacgaaagacctatttaa 48507798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 604 - 669
Target Start/End: Complemental strand, 13872328 - 13872263
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgattatat-tttgcagggacgaaagacctatttaaac 669  Q
    ||||||||||||| ||| ||||||||||||||  |||| |||||||||| |||||||||||||||||    
T  13872328 attagtaacttcaaggataaaaattcaaatgac-atatatttgcagggatgaaagacctatttaaac 13872263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Complemental strand, 47980748 - 47980686
Alignment:
Q  397 agtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagt 459  Q
    ||||| ||||| || ||||||||||||  || |||||||||||||||||||| ||||||||||    
T  47980748 agtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagt 47980686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 611 - 667
Target Start/End: Complemental strand, 35730721 - 35730665
Alignment:
Q  611 acttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  35730721 acttcagagacgaaaattcaaatgacttatattt-gcagggacgaaagacctatttaa 35730665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 8287251 - 8287315
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || ||||||||||||   | |||||||||||||||||||| |||||||||    
T  8287251 attagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaag 8287315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 12691531 - 12691594
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||| ||||||| |||||||    
T  12691531 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaagacttatttaa 12691594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 20086696 - 20086633
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||| ||  |||| |||||||||| |||||||||||||||    
T  20086696 attagtaacttcagggacgaaaattcaaaggacctata-tttgcagggatgaaagacctatttaa 20086633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 667
Target Start/End: Complemental strand, 27813151 - 27813052
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    |||||||||||   |||||| ||||| | || ||| || |||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||| ||||||    
T  27813151 tcaaatgattagtatttgcaatgacaaaatggaaggatcagtaacttcatggataaaaattcaaatgacttata-tttgcagggacaaaagacttattta 27813053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 37677914 - 37677850
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||    
T  37677914 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaag 37677850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 47862218 - 47862154
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| |||||||| |||||||||||| |   ||||||||||||| |||||| |||||||||    
T  47862218 attagtaacttcagagacgaaaattcaaatgacatatatttgcagggatgaaagacctatttaag 47862154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 562 - 634
Target Start/End: Original strand, 47862428 - 47862500
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatg 634  Q
    ||||||||||||||||||  ||||||| | || |||  ||| ||||||||||||| |||| ||||||||||||    
T  47862428 caaaagtcaaatgattaatatttgcaggggcaaattagaaggattagtaacttcatggacgaaaattcaaatg 47862500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 50246176 - 50246240
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||  || |||||||||||| | | ||||||||||||| ||||||||||||||||    
T  50246176 attagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagatctatttaag 50246240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 663
Target Start/End: Original strand, 53559512 - 53559571
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctat 663  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||| |||||||||||    
T  53559512 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaagacctat 53559571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 673
Target Start/End: Original strand, 20086714 - 20086824
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatg-attatattttgcagggacgaaagacct 661  Q
    |||||||||||||||||  ||||||  | |||||| |||| |||| ||||||||| || |||| ||||||||  |||||||| | | ||||||||||| |    
T  20086714 aaaagtcaaatgattaatatttgcaaagccagattaaaaggattaataacttcagagataaaatttcaaatgttttatatttag-aaggacgaaagactt 20086812  T
Q  662 atttaaacattt 673  Q
    |||||| |||||    
T  20086813 atttaagcattt 20086824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 34238595 - 34238658
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgattatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||    | |||||||||| |||| ||||||||||    
T  34238595 attagtaacttcagggacgaaaattcaaatgacctaaatttgcagggatgaaaaacctatttaa 34238658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 458
Target Start/End: Complemental strand, 35730719 - 35730664
Alignment:
Q  403 ttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| |||||||||||| |   |||||||||||||||||||| |||||||||    
T  35730719 ttcagagacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaag 35730664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 457
Target Start/End: Original strand, 35730979 - 35731042
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaa 457  Q
    |||||||| ||||| || |||||||||||| | | |||||||||||||||||||| ||| ||||    
T  35730979 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctacttaa 35731042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 457
Target Start/End: Complemental strand, 50245923 - 50245860
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaa 457  Q
    |||||||| ||||  || |||||||||||| | | |||||| ||||||||||||||||||||||    
T  50245923 attagtaacttcatggatgaaaattcaaatgacctatatttacagggacgaaagatctatttaa 50245860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 461
Target Start/End: Original strand, 54961749 - 54961816
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtca 461  Q
    |||||||| ||||| ||  ||||||||||| | | ||||||||||||||||||||  |||||||||||    
T  54961749 attagtaacttcagggactaaaattcaaatgacctatatttgcagggacgaaagacatatttaagtca 54961816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 13872177 - 13872072
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacc 660  Q
    |||||||||||||||||   ||||||  | || |||| ||| |||| |||||||| |||| ||||||||||| |  ||||||| |||||||||||||||     
T  13872177 caaaagtcaaatgattagtatttgcaagggcatattggaaggattaataacttcatggacgaaaattcaaataacctatattt-gcagggacgaaagaca 13872079  T
Q  661 tatttaa 667  Q
    |||||||    
T  13872078 tatttaa 13872072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 384 - 458
Target Start/End: Complemental strand, 26601345 - 26601271
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    ||||||||| |||| ||| |||||||| |||||||||||| |   ||||||| ||||| |||||| |||||||||    
T  26601345 attacatctgattaataacttcagagacgaaaattcaaatgacttatatttgtagggatgaaagacctatttaag 26601271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 355 - 437
Target Start/End: Original strand, 32846448 - 32846530
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgca 437  Q
    |||||||||| |||| ||||||| |  | |||||||||||||||||| | ||| || ||||||||||||  || |||||||||    
T  32846448 aaatattaatcatttgaaaaatggtcttaattacatcttattagtaactccagggacgaaaattcaaatggtcgatatttgca 32846530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 394 - 460
Target Start/End: Original strand, 34238781 - 34238847
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtc 460  Q
    |||||||| ||||| || ||||||| |||| ||| ||||||||||| |||||| || ||||||||||    
T  34238781 attagtaatttcagggacgaaaatttaaatgatctatatttgcaggaacgaaaaatatatttaagtc 34238847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 635
Target Start/End: Original strand, 26601352 - 26601425
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    ||||||||||||||||||  ||||||  | || |||| ||  ||||||||||||| |||| |||||||||||||    
T  26601352 caaaagtcaaatgattaatatttgcatgggcatattggaatgattagtaacttcatggacgaaaattcaaatga 26601425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 50246117 - 50246053
Alignment:
Q  604 attagtaacttcaggg-acaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||| || ||||||||||||| ||||| ||  ||||||||||||||||||||||    
T  50246117 attagtaacttcaggggacgaaaattcaaatgacttataatta-cagggacgaaagacctatttaa 50246053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 7e-42; HSPs: 82)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 355 - 559
Target Start/End: Complemental strand, 22533688 - 22533484
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||||| ||||| || |||||||||||| | | | |||||||||||||||||| |||||    
T  22533688 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctaaatttgcagggacgaaagacctatt 22533589  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaa 554  Q
    |||| ||||||| | ||||||||||||||||||||| ||||||||||| | |||| ||| |||||||||||       ||||||||||| ||||||| ||    
T  22533588 taagccaaccacctcgcccaatcatcacttgccacatgggcaccatgtcgctaatgacagcccacctcagcaaaaaaacctaattatgaccaaaagttaa 22533489  T
Q  555 atgat 559  Q
    |||||    
T  22533488 atgat 22533484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 355 - 523
Target Start/End: Complemental strand, 27753777 - 27753609
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||  | || ||||||||| |||||||| || || || |||||||||||| | | ||||||||||||||||||||  ||||    
T  27753777 aaatattaatcatttgaaaaatagtcctaattacatctgattagtaactttagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatt 27753678  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctca 523  Q
    |||| ||||||| | ||||||||||||||||||||| |||||||| || | |||| |||||||||||||    
T  27753677 taagccaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacaacccacctca 27753609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 351 - 559
Target Start/End: Original strand, 8323138 - 8323346
Alignment:
Q  351 ttgaaaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatc 450  Q
    ||||| |||||||| |||| |||||||||  | ||||||||| |||||||| ||||| ||  |||||||||||   | |||||||| ||||||||||| |    
T  8323138 ttgaagatattaatcatttgaaaaatgatcataattacatctgattagtaacttcagggacaaaaattcaaatggcctatatttgctgggacgaaagacc 8323237  T
Q  451 tatttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaag 550  Q
    |||||||||||||||| | |||||||||||||||||||||   |||||| || | |||| | | |||||||||||       |||||||| || ||||||    
T  8323238 tatttaagtcaaccacctcgcccaatcatcacttgccacataagcaccacgtcgttaatgatagcccacctcagcaaaaaaacctaattaggaccaaaag 8323337  T
Q  551 tcaaatgat 559  Q
    |||||||||    
T  8323338 tcaaatgat 8323346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 386 - 559
Target Start/End: Complemental strand, 6421889 - 6421716
Alignment:
Q  386 tacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttg 485  Q
    ||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| ||||||| |  |||||| ||||||||||||||| ||    
T  6421889 tacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttacgcaaaccaccttgcccaatcatcacatg 6421790  T
Q  486 ccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||| |||||||| || | |||| |||| ||||||||||       |||||||| || |||||||||||||||    
T  6421789 ccacatgggcaccacgtcgctaatgacaatccacctcagcagaaaaacctaattaggaccaaaagtcaaatgat 6421716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 355 - 560
Target Start/End: Complemental strand, 41339651 - 41339447
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||| | | |||||| ||||| || |||||||||||| ||| ||||||||||||||||||||  ||||    
T  41339651 aaatattaatcatttgaaaaatggtcctaattacat-tgactagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacatatt 41339553  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaa 554  Q
    |||||||||||| |  |||||||||||||||||||| || ||||| || | | || ||| | |||||||||       |||||||| || ||||||||||    
T  41339552 taagtcaaccacctcacccaatcatcacttgccacatggacaccacgtcgctgatgacagctcacctcagcaaaaaaacctaattaggaccaaaagtcaa 41339453  T
Q  555 atgata 560  Q
    ||||||    
T  41339452 atgata 41339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 12990903 - 12991078
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||  || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  12990903 attacatctgattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgcccaatcatcact 12991002  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    || |||| |||||||| || | |||| ||| |||||||||||        ||||||| ||||||||||||||||||    
T  12991003 tgtcacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggatcaaaagtcaaatgat 12991078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 33735582 - 33735407
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  33735582 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgcccaatcatcact 33735483  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| || ||||| || | |||| ||| |||||||||||       ||||||||  | |||||||||||||||    
T  33735482 tgccacatggacaccacgtcgctaatgacatcccacctcagcaaaaaaacctaattagaaccaaaagtcaaatgat 33735407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 355 - 499
Target Start/End: Complemental strand, 16118249 - 16118105
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    ||||||| || |||| ||||||| | || ||||||| | |||||||| || ||||| |||||||||||| | | |||||||||||||||||||| |||||    
T  16118249 aaatattcatcatttgaaaaatggtcctaattacatatgattagtaactttagagacgaaaattcaaatgacctatatttgcagggacgaaagacctatt 16118150  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    |||| ||||||  | ||||||||||||||||||||| | ||||||    
T  16118149 taagccaaccatctcgcccaatcatcacttgccacatgtgcacca 16118105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 562 - 676
Target Start/End: Original strand, 33735589 - 33735703
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||| |||||||||||||  |||| |||||||||||||||||||    
T  33735589 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacgaaagacc 33735687  T
Q  661 tatttaaacatttttt 676  Q
    ||||||| | ||||||    
T  33735688 tatttaagcctttttt 33735703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 13064524 - 13064699
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||  || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  13064524 attacatctgattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgcccaatcatcact 13064623  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    || |||| |||||||| || | |||| ||| |||||||||||        ||||||| || |||||||||||||||    
T  13064624 tgtcacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgat 13064699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 25253201 - 25253376
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||  || |||||||||||| | | ||||||||||||| |||||| ||||||||| ||||||| |  |||||||||||||    
T  25253201 attacatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagccaaccacctcacccaatcatcact 25253300  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| ||| |||| || | |||| ||| |||||||||||        ||||||| || |||||||||||||||    
T  25253301 tgccacatgggtaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgat 25253376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 562 - 669
Target Start/End: Original strand, 6421898 - 6422005
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||||||| |||||||| ||||||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  6421898 caaaagtcaaatgattaatatttgcaggggcatattgaaaggattagtaatttcagggacgaaaattcaaatgacttata-tttgcaggggcgaaagacc 6421996  T
Q  661 tatttaaac 669  Q
    |||||||||    
T  6421997 tatttaaac 6422005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 355 - 499
Target Start/End: Complemental strand, 7015807 - 7015663
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||  | || ||||||||| |||||||| || || || |||||||||||| ||  |||||||||||||| ||||| |||||    
T  7015807 aaatattaatcatttgaaaaatagtcctaattacatctgattagtaactttagggatgaaaattcaaatgatatatatttgcagggacaaaagacctatt 7015708  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    |||| ||||||| | | |||||||||||||||||||  |||||||    
T  7015707 taagccaaccacctcgtccaatcatcacttgccacataggcacca 7015663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 355 - 525
Target Start/End: Original strand, 34404569 - 34404740
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaag-aaaattcaaattatcaatatttgcagggacgaaagatctat 453  Q
    |||||||||| |||| ||||||| |  | ||||||||| |||||||| ||||  || | ||||||||||| | | ||||||||| ||||||||||  |||    
T  34404569 aaatattaatcatttgaaaaatggtcataattacatctgattagtaacttcatggacggaaaattcaaatgacctatatttgcaaggacgaaagacttat 34404668  T
Q  454 ttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||| ||||||| | ||||||||||||||||||||| |||||||| ||   |||| ||| |||||||||||    
T  34404669 ttaagccaaccacctcgcccaatcatcacttgccacatgggcaccacgtcactaatgacatcccacctcagc 34404740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 14745556 - 14745451
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||  |||||||||||||  |||| |||||||||||||||||||    
T  14745556 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctata-tttgcagggacgaaagacc 14745458  T
Q  661 tatttaa 667  Q
    |||||||    
T  14745457 tatttaa 14745451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 32052493 - 32052318
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||| | |||||||||  |||||| | ||||||| ||| ||    
T  32052493 attacatctgattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaaaacctatttaagcaaaccacctcgcccaatgatcgct 32052394  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| || | |||| ||| ||||||| |||        ||||||| ||||||||||||||||||    
T  32052393 tgccacatgggcaccacgtcgctaatgacagcccaccttagcaaaaaaatctaattaggatcaaaagtcaaatgat 32052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 32052500 - 32052605
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||| |||||||||||||  |||| ||||||||||||||||||     
T  32052500 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacgaaagaca 32052598  T
Q  661 tatttaa 667  Q
    |||||||    
T  32052599 tatttaa 32052605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 37945109 - 37945284
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||  || |||||||||| | ||| ||||||||||||| |||||| |||||||||  || | | | | ||||||||||||    
T  37945109 attacatctgattagtaacttcatggacgaaaattcaattgatctatatttgcagggatgaaagacctatttaagcaaatcgcctcgtccaatcatcact 37945208  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| || | |||| ||| ||||||||| |        ||||||||||||||||||||||||||    
T  37945209 tgccacatgggcaccacgtcgctaatgacagcccacctcaacaaaaaaatctaattatgatcaaaagtcaaatgat 37945284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 568 - 667
Target Start/End: Original strand, 7015791 - 7015890
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  ||||||||| ||||||| ||| |||||||||||||||||| |||||||||| || ||||| |||||| ||||||||||||||||||    
T  7015791 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaacgacttata-tttgcaaggacgaaagacctattta 7015889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 25316991 - 25317167
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggac-gaaagatctatttaagtcaaccacattgcccaatcatcac 482  Q
    ||||||||| |||||||| ||||  || |||||||||||| | | |||||||||||||  |||||| ||||||||| ||||||| |  ||||||||||||    
T  25316991 attacatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggatagaaagacctatttaagccaaccacctcacccaatcatcac 25317090  T
Q  483 ttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    |||||||| ||| |||| || | |||| ||| |||||||||||        ||||||| || |||||||||||||||    
T  25317091 ttgccacatgggtaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgat 25317167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 355 - 521
Target Start/End: Original strand, 18934799 - 18934965
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||| | |||| ||||||| |  | |||||| || |||||||| ||| | || |||||||||||| | | |||||| ||||||||||| | |||||    
T  18934799 aaatattagtcatttgaaaaatggtcataattacaactgattagtaacttccgggatgaaaattcaaatgacctatatttacagggacgaaatacctatt 18934898  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacct 521  Q
    |||| ||| ||| ||||||||||||||||||||||| | |||||| || | |||| |||||| ||||    
T  18934899 taagccaatcaccttgcccaatcatcacttgccacatgtgcaccacgtcgttaatgacaacctacct 18934965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 667
Target Start/End: Original strand, 12991062 - 12991169
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||  ||||||| |  |||||| ||| |||||||||||||| ||| |||||||||||||  |||| |||||||||||||||||    
T  12991062 atcaaaagtcaaatgattaatatttgcaggggtagattggaaggattagtaacttcagagacgaaaattcaaatgacatata-tttgcagggacgaaaga 12991160  T
Q  659 cctatttaa 667  Q
    | |||||||    
T  12991161 catatttaa 12991169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 667
Target Start/End: Original strand, 37945268 - 37945374
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||  ||||||  | ||||||||||| |||||||||||||||||| ||||||| |||||  |||| |||||||||||||||||    
T  37945268 atcaaaagtcaaatgattaatatttgcaagggcagattgaaaggattagtaacttcagggacgaaaattc-aatgacctata-tttgcagggacgaaaga 37945365  T
Q  659 cctatttaa 667  Q
    | |||||||    
T  37945366 catatttaa 37945374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 7015616 - 7015511
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||||| ||||||| ||  ||||||||||||| |||  ||||||||||| |  |||| |||||||||||||||||||    
T  7015616 caaaagtcaaatgattaatatttgcagtggcagattggaatgattagtaacttcatggatgaaaattcaaatggcctata-tttgcagggacgaaagacc 7015518  T
Q  661 tatttaa 667  Q
    |||||||    
T  7015517 tatttaa 7015511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 13064685 - 13064790
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| ||||||||||| || ||| |||||||||||||  |||| ||||||||||||||||||     
T  13064685 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaactttagagacgaaaattcaaatgacatata-tttgcagggacgaaagaca 13064783  T
Q  661 tatttaa 667  Q
    |||||||    
T  13064784 tatttaa 13064790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 25253194 - 25253089
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatg-attatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||| ||| |||||||||||||||||| |||||||||||| | |||| |||||||||| |||||||     
T  25253194 caaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactata-tttgcagggatgaaagaca 25253096  T
Q  661 tatttaa 667  Q
    |||||||    
T  25253095 tatttaa 25253089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 25253362 - 25253467
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    |||||||||||||||||   ||||||  | ||||||| ||| |||||||||||||||||| |||||||||||||  |||| ||||||||||||||||||     
T  25253362 caaaagtcaaatgattagtatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacgaaagaca 25253460  T
Q  661 tatttaa 667  Q
    |||||||    
T  25253461 tatttaa 25253467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 25316984 - 25316879
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatg-attatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||| ||| |||||||||||||||||| |||||||||||| | |||| |||||||||| |||||||     
T  25316984 caaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactata-tttgcagggatgaaagaca 25316886  T
Q  661 tatttaa 667  Q
    |||||||    
T  25316885 tatttaa 25316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 25317153 - 25317258
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    |||||||||||||||||   ||||||  | ||||||| ||| |||||||||||||||||| |||||||||||||  |||| ||||||||||||||||||     
T  25317153 caaaagtcaaatgattagtatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacgaaagaca 25317251  T
Q  661 tatttaa 667  Q
    |||||||    
T  25317252 tatttaa 25317258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 37945102 - 37944997
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||| ||| |||||||||||||||||| |||||||||||||  |||| ||| || ||||||||||||    
T  37945102 caaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttacaaggacgaaagacc 37945004  T
Q  661 tatttaa 667  Q
    |||||||    
T  37945003 tatttaa 37944997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 643
Target Start/End: Complemental strand, 41339462 - 41339380
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattt 643  Q
    ||||||||||||||| ||||||||||||| ||||||| ||  ||||| |||||||||||| ||||||||||||| ||||||||    
T  41339462 caaaagtcaaatgataaaattttgcagtggcagattggaaagattagcaacttcagggacgaaaattcaaatgacttatattt 41339380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 384 - 525
Target Start/End: Original strand, 18013727 - 18013868
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| ||||||  ||||||||  |||||| | || |||||||||||    
T  18013727 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacttatttaagcaaaccacctcgctcaatcatcact 18013826  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    || |||| | |||||| || | |||| |||  ||||||||||    
T  18013827 tgtcacatgcgcaccacgtcgctaatgacagtccacctcagc 18013868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 667
Target Start/End: Complemental strand, 27753588 - 27753482
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||  ||||||||| ||| ||| ||| ||||||||||||| |||| ||||||| |||||  |||| |||||||||||||||||    
T  27753588 atcaaaagtcaaatgattaatatttgcagtggcagtttggaaggattagtaacttcatggacgaaaattc-aatgacctata-tttgcagggacgaaaga 27753491  T
Q  659 cctatttaa 667  Q
    |||| ||||    
T  27753490 cctacttaa 27753482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 667
Target Start/End: Complemental strand, 32052334 - 32052227
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||  ||||||| | | ||||| ||| |||||||||||||||||| |||||||||||||  |||| ||| ||||||||||| |    
T  32052334 atcaaaagtcaaatgattaatatttgcaggggcggattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttacagggacgaaaaa 32052236  T
Q  659 cctatttaa 667  Q
    | |||||||    
T  32052235 catatttaa 32052227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 592 - 669
Target Start/End: Complemental strand, 6421700 - 6421623
Alignment:
Q  592 cagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaaac 669  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||  |||| |||||||||||||||||| |||||||||    
T  6421700 cagattgaaaagattagtaacttcaaggacaaaaattcaaatgacatata-tttgcagggacgaaagacatatttaaac 6421623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 676
Target Start/End: Complemental strand, 16118061 - 16117955
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||||||||||||| |||         |||||||||||||||||| |||||||||||||  |||| ||| ||||||| |||||||    
T  16118061 caaaagtcaaatgattaaattttgcagtggcagg--------attagtaacttcagggacgaaaattcaaatgacctata-tttacagggacaaaagacc 16117971  T
Q  661 tatttaaacatttttt 676  Q
    ||||||||| ||||||    
T  16117970 tatttaaacctttttt 16117955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 570 - 667
Target Start/End: Complemental strand, 22533490 - 22533393
Alignment:
Q  570 aaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||| |||| ||||||| ||  |||| ||||||||||||| |||||||||||||  |||| |||||| || ||||||||||||||||    
T  22533490 aaatgattaaattttgtagtggcagattggaatgattaataacttcagggacgaaaattcaaatgacctata-tttgcaagggcgaaagacctatttaa 22533393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 33735421 - 33735316
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| ||||||||| ||| |||||||| ||||||||| |||| |||||| |  |||| |||| |||||||||||||     
T  33735421 caaaagtcaaatgattaatatttgcagggacagattggaaggattagtaatttcagggacgaaaaatcaaatggcctata-tttgtagggacgaaagaca 33735323  T
Q  661 tatttaa 667  Q
    |||||||    
T  33735322 tatttaa 33735316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 429 - 559
Target Start/End: Original strand, 20704873 - 20705003
Alignment:
Q  429 atatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnn 528  Q
    ||||||||||||| |||||| |||||||| | ||| |||| | ||||||||||||||| ||| |||||||| || | |||| ||| |||||||||||       
T  20704873 atatttgcagggatgaaagacctatttaaataaacaacatcgtccaatcatcacttgctacatgggcaccacgtcgctaatgacagcccacctcagcaaa 20704972  T
Q  529 nnnncctaattatgatcaaaagtcaaatgat 559  Q
         ||||||| || |||||||||||||||    
T  20704973 aaaatctaattaggaccaaaagtcaaatgat 20705003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 562 - 669
Target Start/End: Original strand, 18934990 - 18935096
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||||||||||||| || |||  ||| |||||||| ||||||||| |||| ||||||||  |||| ||| ||||||| ||| |||    
T  18934990 caaaagtcaaatgattaaattttgcagtggcaaattagaaggattagtaatttcagggacgaaaa-tcaaatgacctata-tttacagggacaaaaaacc 18935087  T
Q  661 tatttaaac 669  Q
    |||||||||    
T  18935088 tatttaaac 18935096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 568 - 667
Target Start/End: Complemental strand, 21260967 - 21260868
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||| || || | || ||| |||||||||||||||||| |||||||||||||  |||| ||||||||||||||||| |||||||    
T  21260967 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacgaaagaactattta 21260869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 355 - 523
Target Start/End: Original strand, 21260951 - 21261118
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| |||||||||  | ||||||||| |||| ||| |||||  | |||||||||||| | | |||||||||||||| |||||  ||||    
T  21260951 aaatattaatcatttgaaaaatgatcataattacatctgattaataacttcaggaacgaaaattcaaatgacctatatttgcagggacaaaagacatatt 21261050  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctca 523  Q
    |||| | ||||| |   |||||||| | |||||||| |||||||| ||   |||| |||||||||||||    
T  21261051 taaggc-accacctcatccaatcattatttgccacatgggcaccacgtcactaatgacaacccacctca 21261118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 20704989 - 20705095
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatat-tttgcagggacgaaagac 659  Q
    ||||||||||||||||||  ||||||| | ||||||||||  |||||||||||||  ||| |||||||||||||  ||||| ||| ||||||||||||||    
T  20704989 caaaagtcaaatgattaatatttgcaggg-cagattgaaaagattagtaacttcaaagacgaaaattcaaatgacctatatatttacagggacgaaagac 20705087  T
Q  660 ctatttaa 667  Q
     |||||||    
T  20705088 atatttaa 20705095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 355 - 466
Target Start/End: Complemental strand, 22024168 - 22024057
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||  || ||||| ||||  || |||||||||||| | | |||||||||||||||||||| ||||     
T  22024168 aaatattaatcatttgaaaaatggtcctaattacatcggataagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctata 22024069  T
Q  455 taagtcaaccac 466  Q
    |||| |||||||    
T  22024068 taagccaaccac 22024057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 22533649 - 22533586
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgattatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||    | ||||||||||||||||||||||||||    
T  22533649 attagtaacttcagggacgaaaattcaaatgacctaaatttgcagggacgaaagacctatttaa 22533586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 667
Target Start/End: Complemental strand, 41339611 - 41339550
Alignment:
Q  606 tagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||||||||| |||||||    
T  41339611 tagtaacttcagggacgaaaattcaaatgatctata-tttgcagggacgaaagacatatttaa 41339550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 371 - 448
Target Start/End: Original strand, 12628317 - 12628394
Alignment:
Q  371 aaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaaga 448  Q
    ||||||| |||| |||||||||||||||||| ||||| || |||||||||||| |   ||||||||| ||||||||||    
T  12628317 aaaaatggttctaattacatcttattagtaacttcagggacgaaaattcaaatcacttatatttgcatggacgaaaga 12628394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 8323181 - 8323244
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||||||||||||||| |  |||| ||||| ||||||||||||||||||||    
T  8323181 attagtaacttcagggacaaaaattcaaatggcctata-tttgctgggacgaaagacctatttaa 8323244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 14745514 - 14745450
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | |||||||||||||||||||| |||||||||    
T  14745514 attagtaacttcagggatgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 14745450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 634
Target Start/End: Original strand, 14745589 - 14745661
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatg 634  Q
    ||||||||||||||||||  ||||||  | ||||||| ||| |||||||||||||| ||| ||||||||||||    
T  14745589 caaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaacttcagcgacgaaaattcaaatg 14745661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 667
Target Start/End: Complemental strand, 18934815 - 18934716
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    |||||||| |||  |||||| || || | |||||| ||||||||||||| |||| ||||||||||||| ||||| |||||||||| ||||||| ||||||    
T  18934815 tcaaatgactaatatttgcaatggcaaaatgaaaggattagtaacttcatggacgaaaattcaaatgacttata-tttgcagggatgaaagacatattta 18934717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 21260931 - 21260867
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | |||||||||||||||||||| |||||||||    
T  21260931 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagaactatttaag 21260867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 667
Target Start/End: Original strand, 22024152 - 22024251
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  ||||||||| || |||| ||| ||||||||||| || ||| |||||||||||||  |||| ||||||| |||||||||| ||||||    
T  22024152 tcaaatgattaatatttgcagtggcaaattggaaggattagtaacttaagtgacgaaaattcaaatgacctata-tttgcagagacgaaagacgtattta 22024250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 33735572 - 33735509
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  33735572 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 33735509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 33735631 - 33735695
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | |||||||||||||||||||| |||||||||    
T  33735631 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 33735695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 604 - 666
Target Start/End: Complemental strand, 6421881 - 6421819
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||| ||||||||||||||    
T  6421881 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaagacctattta 6421819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 597 - 667
Target Start/End: Original strand, 8323367 - 8323437
Alignment:
Q  597 tgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||||| |||| ||||||||||| |  |||| ||||||||| ||||||||||||||||    
T  8323367 tgaaagaattagtaacttcaaggacgaaaattcaaatagcatata-tttgcaggggcgaaagacctatttaa 8323437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 568 - 669
Target Start/End: Original strand, 27753761 - 27753864
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatat-tttgcagggacgaaagacctattt 665  Q
    ||||||||||||  ||||||||| ||||||| ||| ||||||||||||||  || ||||||||||| | |||||| |||  |  ||||||||||||||||    
T  27753761 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagaaacgaaaattcaaataacttatatatttatattgacgaaagacctattt 27753860  T
Q  666 aaac 669  Q
    ||||    
T  27753861 aaac 27753864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 604 - 677
Target Start/End: Original strand, 22533708 - 22533781
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaaacatttttta 677  Q
    |||||||||||| ||||| |||||||||||||  |||| ||||||||||||||| | |||||||||| |||||||    
T  22533708 attagtaacttcggggacgaaaattcaaatgacctata-tttgcagggacgaaaaagctatttaaacctttttta 22533781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 31119019 - 31118957
Alignment:
Q  396 tagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||| ||||| || ||||||||||||   | ||||||||||||||||||||||||||||||    
T  31119019 tagtaacttcagggatgaaaattcaaatggcctatatttgcagggacgaaagatctatttaag 31118957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 635
Target Start/End: Complemental strand, 18013720 - 18013647
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    ||||||||||||||||||  ||||||| | || |||| ||| |||||||||||||  ||| |||||||||||||    
T  18013720 caaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcactgacgaaaattcaaatga 18013647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 643
Target Start/End: Complemental strand, 20704844 - 20704763
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattt 643  Q
    |||||||||||||||||  ||||||  || | ||| |||| |||||||| |||||||| |||||||||||||| ||||||||    
T  20704844 aaaagtcaaatgattaatatttgcaaggataaattaaaaggattagtaatttcagggataaaaattcaaatgacttatattt 20704763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 147424 - 147487
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    |||||||| |||||||||||||||| ||||||| |||| |||||||| |||||||| ||||||||    
T  147424 attagtaatttcagggacaaaaatttaaatgatctata-tttgcaggaacgaaagagctatttaa 147487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 7015768 - 7015705
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgattatat-tttgcagggacgaaagacctatttaa 667  Q
    ||||||||||| |||||  |||||||||||||| |||| ||||||||||| ||||||||||||||    
T  7015768 attagtaactttagggatgaaaattcaaatgat-atatatttgcagggacaaaagacctatttaa 7015705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 12990913 - 12990976
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||| |||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  12990913 attagtaacttcatggacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 12990976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 12991106 - 12991170
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| |||||||| |||||||||||| |   ||||||||||||||||||||  ||||||||    
T  12991106 attagtaacttcagagacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaag 12991170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 13064534 - 13064597
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||| |||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  13064534 attagtaacttcatggacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 13064597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 16118210 - 16118147
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||| || ||| |||||||||||||  ||||||| |||||||||||||||||||||||    
T  16118210 attagtaactttagagacgaaaattcaaatgacctatattt-gcagggacgaaagacctatttaa 16118147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 18013737 - 18013800
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||| ||||||| |||||||    
T  18013737 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaagacttatttaa 18013800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 25253211 - 25253274
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||| |||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  25253211 attagtaacttcaaggacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 25253274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 25253404 - 25253468
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | ||||||||||||||||||||  ||||||||    
T  25253404 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 25253468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 25317195 - 25317259
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | ||||||||||||||||||||  ||||||||    
T  25317195 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 25317259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 27753738 - 27753675
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||| |||||| |||||||||||||  |||| |||||||||||||||||| |||||||    
T  27753738 attagtaactttagggacgaaaattcaaatgacctata-tttgcagggacgaaagacatatttaa 27753675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 32052483 - 32052420
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatg-attatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||| | |||| |||||||||| |||| ||||||||||    
T  32052483 attagtaacttcagggacgaaaattcaaatgaactata-tttgcagggatgaaaaacctatttaa 32052420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 32052542 - 32052606
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | ||||||||||||||||||||  ||||||||    
T  32052542 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 32052606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 34404550 - 34404486
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | ||||||||||| |||||||| |||||||||    
T  34404550 attagtaacttcagtgacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 34404486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 34404550 - 34404487
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||| ||| |||||||||||||  |||| |||||||| |||||||||||||||||    
T  34404550 attagtaacttcagtgacgaaaattcaaatgacctata-tttgcaggaacgaaagacctatttaa 34404487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 37945119 - 37945182
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||| |||| ||||||||| |||| ||||||| ||||||| |||||||||||||||    
T  37945119 attagtaacttcatggacgaaaattcaattgatctatattt-gcagggatgaaagacctatttaa 37945182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 441 - 499
Target Start/End: Original strand, 9915503 - 9915561
Alignment:
Q  441 acgaaagatctatttaagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    |||||||| ||||||||| ||||||| | ||||||||||||||||| ||| | ||||||    
T  9915503 acgaaagacctatttaagccaaccacctcgcccaatcatcacttgcgacatgagcacca 9915561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 562 - 659
Target Start/End: Original strand, 18013888 - 18013984
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagac 659  Q
    |||||||||||| |||||  ||||||| | ||||||||||| ||| ||||||||| |||| |||||| |||| |  |||| ||||||||||||||||||    
T  18013888 caaaagtcaaataattaatatttgcagaggcagattgaaaggattggtaacttca-ggacgaaaatttaaatggcctata-tttgcagggacgaaagac 18013984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 607 - 663
Target Start/End: Complemental strand, 22024126 - 22024070
Alignment:
Q  607 agtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctat 663  Q
    |||||||||| |||| |||||||||||||  ||||||| |||||||||||||||||||    
T  22024126 agtaacttcaaggacgaaaattcaaatgacctatattt-gcagggacgaaagacctat 22024070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 355
Target Start/End: Original strand, 37945008 - 37945037
Alignment:
Q  326 tttcgtccttgtaaatataggtcatttgaa 355  Q
    ||||||||||||||||||||||||||||||    
T  37945008 tttcgtccttgtaaatataggtcatttgaa 37945037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 3e-35; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 355 - 499
Target Start/End: Complemental strand, 41846690 - 41846546
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| |||||||||||| ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||||||||||  ||||    
T  41846690 aaatattaatcatttgaaaaatgattctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacttatt 41846591  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    |||| ||||||| | ||| ||||||||||||||||| ||||||||    
T  41846590 taagccaaccacctcgccaaatcatcacttgccacatgggcacca 41846546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 355 - 559
Target Start/End: Complemental strand, 22309729 - 22309525
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||||| || || || |||||||||||| | | |||||||||||||| |||   |||||    
T  22309729 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaactttagggacgaaaattcaaatgacctatatttgcagggacaaaatgcctatt 22309630  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaa 554  Q
    |||| ||||||| | ||||||||||||||||||||| |||||| |||| | |||| ||| |||||||||||       ||||| ||||| ||||||||||    
T  22309629 taagccaaccacctcgcccaatcatcacttgccacatgggcacgatgtcgctaatgacagcccacctcagcaaaaaaacctaaatatgaccaaaagtcaa 22309530  T
Q  555 atgat 559  Q
    |||||    
T  22309529 atgat 22309525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 560 - 669
Target Start/End: Complemental strand, 18477017 - 18476908
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||  ||||  |||||||||||||||     
T  18477017 atcaaaagtcaaatgattaaattttgcagtggcagattggaaggattagtaacttcagggacaaaaattcaaatgacctata-gttgcagggacgaaagg 18476919  T
Q  659 cctatttaaac 669  Q
    |||||||||||    
T  18476918 cctatttaaac 18476908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 379 - 667
Target Start/End: Original strand, 32519265 - 32519536
Alignment:
Q  379 ttctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatca 478  Q
    |||| ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||| |  | ||||||    
T  32519265 ttctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcactcaatca 32519364  T
Q  479 tcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgatatcaaaagtcaaatgatta 578  Q
    |||||||||||| |||||||| || | |||| ||| |||||||||||       |||||||| || ||||                 |||||||||||||    
T  32519365 tcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaa-----------------agtcaaatgatta 32519447  T
Q  579 aattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |  ||||||| | ||||||||||| ||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||| |||||||    
T  32519448 atatttgcaggggcagattgaaaggattagtaacttcaggaacgaaaattcaaatgacttata-tttgcagggacgaaagacatatttaa 32519536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 355 - 559
Target Start/End: Complemental strand, 9694040 - 9693836
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||||| || || || |||||||||||| | | ||||||||||||||||||   |||||    
T  9694040 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaactttagggacgaaaattcaaatgacctatatttgcagggacgaaaatcctatt 9693941  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaa 554  Q
    |||||||| ||  | |||||||||||||||||||||  ||||||| || | |||| ||| |||||||||||       |||||||| || ||||||||||    
T  9693940 taagtcaatcatctcgcccaatcatcacttgccacataggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagtcaa 9693841  T
Q  555 atgat 559  Q
    |||||    
T  9693840 atgat 9693836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 355 - 559
Target Start/End: Original strand, 37984813 - 37985017
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    ||||||||||||||| ||||||| | || ||||||||| |||||||| ||||   |||||||||||||| |   ||||||||||||||||||  | ||||    
T  37984813 aaatattaattatttgaaaaatggtcctaattacatctgattagtaatttcatgaaagaaaattcaaatgacatatatttgcagggacgaaaattttatt 37984912  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaa 554  Q
    |||| ||||||  |  | |||||||||||||||||| ||| |||| |||| |||| ||| |||||||||||       |||||||| |||||||||||||    
T  37984913 taagccaaccatctcactcaatcatcacttgccacatgggtaccacgttgctaatgacagcccacctcagcaaaaaaacctaattaagatcaaaagtcaa 37985012  T
Q  555 atgat 559  Q
    |||||    
T  37985013 atgat 37985017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 384 - 525
Target Start/End: Original strand, 17580443 - 17580584
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| ||| ||||||||| ||| |||||| ||||||||   |||||| | ||||||||||||||    
T  17580443 attacatctgattagtaacttcagggacgaaaattcaaatgatctatatttgcaaggatgaaagacctatttaaacaaaccacctcgcccaatcatcact 17580542  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||||| |||||||| || | |||| |||||||||||||||    
T  17580543 tgccacatgggcaccacgtcgctaatgacaacccacctcagc 17580584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 355 - 499
Target Start/End: Complemental strand, 5608892 - 5608748
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||||| |||| | | ||||||| |||| |   |||||||||||||||||||| |||||    
T  5608892 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcataaacgaaaattaaaatgacttatatttgcagggacgaaagacctatt 5608793  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    |||| ||||||| | ||||||||||||||||||||| ||||||||    
T  5608792 taagccaaccacctcgcccaatcatcacttgccacatgggcacca 5608748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 355 - 499
Target Start/End: Original strand, 28599513 - 28599657
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||| | |||||||| ||||| || ||||||||||||  || |||||||||||| ||||||| |||||    
T  28599513 aaatattaatcatttgaaaaatggtcctaattacatataattagtaatttcagggacgaaaattcaaatggtctatatttgcaggggcgaaagacctatt 28599612  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    |||| ||||||| | || |||||||||||||||||| ||||||||    
T  28599613 taagccaaccacctcgctcaatcatcacttgccacatgggcacca 28599657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 351 - 525
Target Start/End: Original strand, 17284817 - 17284991
Alignment:
Q  351 ttgaaaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatc 450  Q
    |||||||||||||| |||| ||||||| | || | ||||| | |||||||| |||||  |  ||||||||||||| | |||||||||||||||||||  |    
T  17284817 ttgaaaatattaatcatttgaaaaatggtcctaactacatatgattagtaacttcaggaatcaaaattcaaattacctatatttgcagggacgaaagccc 17284916  T
Q  451 tatttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    |||||||| ||||||| | ||| ||||||||||||||||| | |||||| || | |||| ||| |||||||||||    
T  17284917 tatttaagccaaccacctcgccaaatcatcacttgccacatgtgcaccacgtcgctaatgacagcccacctcagc 17284991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 4375827 - 4375932
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| |||| |||||| ||||||  |||| |||||| ||||||||||||    
T  4375827 caaaagtcaaatgattaaattttgcagtggcagattggaaggattagtaacttcatggacgaaaatttaaatgacatata-tttgcatggacgaaagacc 4375925  T
Q  661 tatttaa 667  Q
    |||||||    
T  4375926 tatttaa 4375932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 355 - 559
Target Start/End: Original strand, 17366712 - 17366912
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||||||||||| | || ||||||||| |||||||| ||||| || ||||||||||||   | ||||||||| ||||||||||  ||||    
T  17366712 aaatattaatcatttaaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatggactatatttgcaaggacgaaagacatatt 17366811  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaa 554  Q
    |||| ||||    | |||||||||||||||| || | |||||||| || | |||| |||||||||||||||       |||||||| || ||||||||||    
T  17366812 taagccaac----tcgcccaatcatcacttgtcatatgggcaccacgtcgctaatgacaacccacctcagcaaaaaaacctaattaggaccaaaagtcaa 17366907  T
Q  555 atgat 559  Q
     ||||    
T  17366908 ttgat 17366912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 20911238 - 20911133
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||| |||||||||||||  |||| |||||||||||||||||||    
T  20911238 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacgaaagacc 20911140  T
Q  661 tatttaa 667  Q
    |||||||    
T  20911139 tatttaa 20911133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 20911245 - 20911420
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | |||||||||||||  ||||  |||||||||  |||||| | ||||||||||||||    
T  20911245 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggataaaagtcctatttaagcaaaccacctcgcccaatcatcact 20911344  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| || | |||| ||| |||| ||||||        |||||||||| |||||||||||||||    
T  20911345 tgccacatgggcaccacgtcgctaatgacagcccatctcagcaaaaaaatctaattatgaccaaaagtcaaatgat 20911420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 355 - 523
Target Start/End: Complemental strand, 43682155 - 43681988
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||||| ||||| || |||||||||||| | | | |||||||| |||||||||  ||||    
T  43682155 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaataacctaaatttgcagagacgaaagacatatt 43682056  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctca 523  Q
    |||| ||||||| |  ||||||||||||||||||||  |||| || || | |||| |||||||||||||    
T  43682055 taagccaaccacctcacccaatcatcacttgccaca-tggcatcacgtcgctaatgacaacccacctca 43681988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 355 - 521
Target Start/End: Original strand, 4375635 - 4375801
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| |||| ||||||||| |||||||| ||||| || |||||||||||||    |||||||||| |||||||||  ||||    
T  4375635 aaatattaatcatttgaaaaatggttctaattacatctgattagtaacttcagggacgaaaattcaaattgcatatatttgcagagacgaaagacatatt 4375734  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacct 521  Q
    |||   |||||| | || |||||||||||||||| | |||||||| || | ||||  ||||||||||    
T  4375735 taaactaaccacctcgctcaatcatcacttgccatatgggcaccacgtcgttaatgccaacccacct 4375801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 28599703 - 28599808
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    |||||||||||||||||||||||||| || ||||||| ||| ||| |||||||||| ||| ||||||||||||| ||||| ||| |||||| ||||||||    
T  28599703 caaaagtcaaatgattaaattttgcaatggcagattggaaggatttgtaacttcagagacgaaaattcaaatgacttata-tttacagggatgaaagacc 28599801  T
Q  661 tatttaa 667  Q
    |||||||    
T  28599802 tatttaa 28599808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 562 - 669
Target Start/End: Complemental strand, 19607025 - 19606918
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||  ||||||||| ||| |||||||||||||||||| |||||||||||||  |||| ||| ||||||||||||||     
T  19607025 caaaagtcaaatgattaatatttgcaacgacagattggaaggattagtaacttcagggacgaaaattcaaatgacatata-tttacagggacgaaagaca 19606927  T
Q  661 tatttaaac 669  Q
    |||||||||    
T  19606926 tatttaaac 19606918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 568 - 667
Target Start/End: Original strand, 22309713 - 22309812
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  ||||||||| ||||||| || ||||||||||||||||||| |||||||||||||  |||| |||||||||| ||||||||||||||    
T  22309713 tcaaatgattaatatttgcagtgtcagattggaacaattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggaagaaagacctattta 22309811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 384 - 499
Target Start/End: Original strand, 1150052 - 1150167
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||| | |||||||| ||||| || |||||||||||| | | ||||||| ||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  1150052 attacatttgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaagcaaaccacgtcgcccaatcatcact 1150151  T
Q  484 tgccacacgggcacca 499  Q
    ||||||| ||||||||    
T  1150152 tgccacatgggcacca 1150167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 562 - 676
Target Start/End: Original strand, 1150213 - 1150327
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||||||| |||||||| ||||||||| |||||||||||||  |||| |||||||| |||||||||     
T  1150213 caaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaatttcagggacgaaaattcaaatgacctata-tttgcaggcacgaaagaca 1150311  T
Q  661 tatttaaacatttttt 676  Q
    ||||||| | ||||||    
T  1150312 tatttaagcctttttt 1150327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 1150045 - 1149940
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | | ||||| ||| |||||||||||||||||| |||||||||||||  |||| ||||||||||||||| |||    
T  1150045 caaaagtcaaatgattaatatttgcaggggccgattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacgaaatacc 1149947  T
Q  661 tatttaa 667  Q
    |||||||    
T  1149946 tatttaa 1149940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 16367071 - 16366966
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||| |||||||||||||  |||| ||| ||||||||||||||     
T  16367071 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttacagggacgaaagaca 16366973  T
Q  661 tatttaa 667  Q
    |||||||    
T  16366972 tatttaa 16366966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 16367232 - 16367057
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||| | |||||||| ||||| || |||||||||||| | | ||||||| ||||| |||||| |||||||||  |||||| | || |||||||||||    
T  16367232 attacatatgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaagcaaaccacctcgctcaatcatcact 16367133  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| | |||||| || | |||| ||| |||||||||||        ||||||| || |||||||||||||||    
T  16367132 tgccacatgtgcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgat 16367057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 22731808 - 22731913
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| ||||||||||||| | ||||||||||| |||| ||||||||||| |  |||| ||||||||||||||||||     
T  22731808 caaaagtcaaatgattaatatttgcagggacagattgaaaggaatagtaacttcacggacgaaaattcaaatggcctata-tttgcagggacgaaagaca 22731906  T
Q  661 tatttaa 667  Q
    |||||||    
T  22731907 tatttaa 22731913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 568 - 669
Target Start/End: Original strand, 9959107 - 9959208
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgattatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||  |||| |||| ||||||||||| ||||||||||||| |||| |||||||||||||  |   |||||||||||||||||| |||||||    
T  9959107 tcaaatgattaatatttgtagtggcagattgaaaggattagtaacttcatggaccaaaattcaaatgaccaatatttgcagggacgaaagacttatttaa 9959206  T
Q  668 ac 669  Q
    ||    
T  9959207 ac 9959208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 355 - 525
Target Start/End: Complemental strand, 9959123 - 9958953
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| |  | ||||||||| |||||||| |||| |||  ||||||||||| | | |||||||||||||||||| | | |||    
T  9959123 aaatattaatcatttgaaaaatggtcataattacatctgattagtaacttcaaagataaaaattcaaatgacctatatttgcagggacgaaaaaccaatt 9959024  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    |||| |||| || |   ||| ||||||||||| ||| |||||||| || | |||| ||| |||||||||||    
T  9959023 taagccaacaacttcatccagtcatcacttgcgacatgggcaccacgtcgctaatgacagcccacctcagc 9958953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 560 - 665
Target Start/End: Original strand, 37985001 - 37985106
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||||||||||||| || |||| ||| |||||||| ||||| ||| |||| ||||||||  |||| ||||||||||||||| |    
T  37985001 atcaaaagtcaaatgattaaattttgcagtggcaaattggaaggattagtaatttcagagacgaaaaatcaaatgacatata-tttgcagggacgaaata 37985099  T
Q  659 cctattt 665  Q
    | |||||    
T  37985100 cttattt 37985106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 45663784 - 45663889
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaa-tgattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||  ||| |||||||||||||||||| |||||||||| ||| |||| ||| ||||||||||||||     
T  45663784 caaaagtcaaatgattaatatttgcagggccagatttgaaggattagtaacttcagggacgaaaattcaaattgactata-tttacagggacgaaagaca 45663882  T
Q  661 tatttaa 667  Q
    |||||||    
T  45663883 tatttaa 45663889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 560 - 621
Target Start/End: Complemental strand, 5608702 - 5608641
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggac 621  Q
    ||||||||||||||||||||||||||||||| || |||| ||| ||||||||||||||||||    
T  5608702 atcaaaagtcaaatgattaaattttgcagtgccaaattggaaggattagtaacttcagggac 5608641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 563 - 667
Target Start/End: Complemental strand, 41846499 - 41846395
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacct 661  Q
    |||||||||||||||||  ||||||||| ||||||  ||| |||| ||||||||||||| |||||||||||||  |||| |||| |||||||||||| ||    
T  41846499 aaaagtcaaatgattaatatttgcagtggcagattagaaggattactaacttcagggacgaaaattcaaatgacctata-tttgtagggacgaaagatct 41846401  T
Q  662 atttaa 667  Q
    ||||||    
T  41846400 atttaa 41846395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 562 - 634
Target Start/End: Complemental strand, 9693850 - 9693778
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatg 634  Q
    ||||||||||||||||||| ||||||||| ||||||| ||| |||||||||||||| ||| |||||| |||||    
T  9693850 caaaagtcaaatgattaaactttgcagtggcagattggaaggattagtaacttcagtgacgaaaattaaaatg 9693778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 568 - 667
Target Start/End: Original strand, 9694024 - 9694123
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||| ||||| | || ||| |||||||||||||||||| |||||||||||||  |||| |||||| ||||||||||||||||||    
T  9694024 tcaaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcatggacgaaagacctattta 9694122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 570 - 667
Target Start/End: Complemental strand, 10446932 - 10446835
Alignment:
Q  570 aaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||  ||||||| | ||||||| ||| |||||||||||||||||| ||||||||||| |  |||| |||||||||||||||||| |||||||    
T  10446932 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctata-tttgcagggacgaaagacatatttaa 10446835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 659
Target Start/End: Original strand, 16367239 - 16367336
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagac 659  Q
    ||||||||||||||||||  ||||||| | || |||| ||| |||||||||||||||||| ||||||||||| |  |||| ||||||||||||||||||    
T  16367239 caaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggcctata-tttgcagggacgaaagac 16367336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 17285011 - 17285116
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||| ||||||||||||||||  |||||| |||| ||| |||||||||||||  ||| |||||||||||||  || ||||| ||||||||||||| |    
T  17285011 caaaagttaaatgattaaattttgttgtgacatattggaaggattagtaacttcattgacgaaaattcaaatgacctaaatttt-cagggacgaaagatc 17285109  T
Q  661 tatttaa 667  Q
    |||||||    
T  17285110 tatttaa 17285116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 584 - 677
Target Start/End: Complemental strand, 22309517 - 22309424
Alignment:
Q  584 tgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaaacatttttta 677  Q
    ||||||| ||||||| ||| |||||||||||||  ||| |||||||||||||  |||| |||||||||||||||||||||||||| | |||||||    
T  22309517 tgcagtggcagattggaaggattagtaacttcattgactaaaattcaaatgacctata-tttgcagggacgaaagacctatttaagcctttttta 22309424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 568 - 669
Target Start/End: Complemental strand, 28599529 - 28599428
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||| || || | || ||| ||||||||||||| |||| |||||||||||||| |||| |||||| ||||||||||||||||||    
T  28599529 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatgatctata-tttgcaaggacgaaagacctattta 28599431  T
Q  667 aac 669  Q
    |||    
T  28599430 aac 28599428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 32519263 - 32519158
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  |||||||   || |||| ||| |||||||| ||||||||| |||||||||||||  |||| ||||||||||||||||||     
T  32519263 caaaagtcaaatgattaatatttgcaggagcatattggaaggattagtaatttcagggacgaaaattcaaatgacctata-tttgcagggacgaaagaca 32519165  T
Q  661 tatttaa 667  Q
    |||||||    
T  32519164 tatttaa 32519158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 384 - 525
Target Start/End: Original strand, 8089567 - 8089708
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||  || |||||||||||  | | ||||||||||||| |||||| |||||||||  |||||| | | ||||| ||||||    
T  8089567 attacatctgattagtaacttcaaggacgaaaattcaaacgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgtccaattatcact 8089666  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||||| || ||||| || | |||| |||  ||||||||||    
T  8089667 tgccacatggacaccacgtcgctaatgacagtccacctcagc 8089708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 562 - 669
Target Start/End: Complemental strand, 8089560 - 8089453
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    |||||||||||||||| |  ||||||| | ||||||| ||| |||||||||||||  ||| |||||||||||||  |||| ||||||| ||||||| |||    
T  8089560 caaaagtcaaatgattgatatttgcaggggcagattggaaggattagtaacttcaaagacgaaaattcaaatgacatata-tttgcagagacgaaaaacc 8089462  T
Q  661 tatttaaac 669  Q
    |||||||||    
T  8089461 tatttaaac 8089453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 604 - 670
Target Start/End: Original strand, 17580453 - 17580519
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaaaca 670  Q
    |||||||||||||||||| |||||||||||||| |||| |||||| ||| ||||||||||||||||||    
T  17580453 attagtaacttcagggacgaaaattcaaatgatctata-tttgcaaggatgaaagacctatttaaaca 17580519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 9958933 - 9958829
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacc 660  Q
    |||||||||| |||||||  ||||||||| | ||||| ||| ||||| |||||||  ||| |||||||||||||| |||| ||||||||||||||| |||    
T  9958933 caaaagtcaactgattaatatttgcagtggctgattggaagcattagcaacttcattgacgaaaattcaaatgatctata-tttgcagggacgaaa-acc 9958836  T
Q  661 tatttaa 667  Q
    |||||||    
T  9958835 tatttaa 9958829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 582 - 667
Target Start/End: Original strand, 20911426 - 20911510
Alignment:
Q  582 tttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||||||||||||  |||| ||| |||||||||||||| |||||||    
T  20911426 tttgcag-gacagattggaatgattagtaacttcagggacaaaaattcaaatgacctata-tttacagggacgaaagacatatttaa 20911510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 436 - 525
Target Start/End: Complemental strand, 18477124 - 18477035
Alignment:
Q  436 cagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||||||||| |  |||||||| ||||||  | ||||||||||||||| ||||| ||||||||||| | |||| ||| |||||||||||    
T  18477124 cagggacgaaaaacttatttaagccaaccagctagcccaatcatcacttaccacatgggcaccatgtcgttaatgacagcccacctcagc 18477035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 560 - 667
Target Start/End: Complemental strand, 17580438 - 17580331
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||  ||||||| | || |||| ||| |||| ||||||| ||||| ||||||||||| |  |||| ||| ||| |||||||||    
T  17580438 atcaaaagtcaaatgattaatatttgcaggggcaaattggaaggattaataacttcggggacgaaaattcaaatagtctata-tttacagagacgaaaga 17580340  T
Q  659 cctatttaa 667  Q
    |||||||||    
T  17580339 cctatttaa 17580331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 20911196 - 20911132
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | |||||||||||||||||||| |||||||||    
T  20911196 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 20911132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 41846651 - 41846588
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||||||||||| |||||||    
T  41846651 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacgaaagacttatttaa 41846588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 570 - 667
Target Start/End: Complemental strand, 17366726 - 17366629
Alignment:
Q  570 aaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||  ||||||||| ||||||| ||| |||| ||| ||||||||  |||||||||||||  |||| |||||| ||| |||||||||||||||    
T  17366726 aaatgattaatatttgcagtggcagattggaaggattattaaattcagggaagaaaattcaaatgacctata-tttgcatggatgaaagacctatttaa 17366629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 384 - 458
Target Start/End: Complemental strand, 22731801 - 22731727
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    ||||||||| |||||||| || || || |||||||||||| | | ||||||||||||| |||||| |||||||||    
T  22731801 attacatctgattagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 22731727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 634
Target Start/End: Original strand, 41846674 - 41846740
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatg 634  Q
    ||||||||||||  ||||||||| ||||||| ||| | ||||||||||||| || ||||||||||||    
T  41846674 tcaaatgattaatatttgcagtggcagattggaaggagtagtaacttcaggaacgaaaattcaaatg 41846740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 413 - 522
Target Start/End: Complemental strand, 19607158 - 19607049
Alignment:
Q  413 aaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataac 512  Q
    |||| ||||||||| ||||||||||||||  |||||  ||||||||  || ||| | | ||||||||||||||||| | |||||||| || | |||| ||    
T  19607158 aaaagtcaaattattaatatttgcagggataaaagacatatttaagcaaatcacctcgtccaatcatcacttgccatatgggcaccacgtcgctaatgac 19607059  T
Q  513 aacccacctc 522  Q
    | ||||||||    
T  19607058 agcccacctc 19607049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 603 - 667
Target Start/End: Original strand, 28599551 - 28599615
Alignment:
Q  603 aattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||| ||||||||| |||||||||||| | |||| ||||||||| ||||||||||||||||    
T  28599551 aattagtaatttcagggacgaaaattcaaatggtctata-tttgcaggggcgaaagacctatttaa 28599615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 667
Target Start/End: Complemental strand, 43681963 - 43681859
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgattatat-tttgcagggacgaaagacct 661  Q
    |||||||||||||||||  |||||| || || | || ||  ||||||||||| | |||| |||||||||||||  |||| |||||||||||||||||| |    
T  43681963 aaaagtcaaatgattaatatttgcaatggcaaaatggaatgattagtaactttatggacgaaaattcaaatgac-atatatttgcagggacgaaagacat 43681865  T
Q  662 atttaa 667  Q
    ||||||    
T  43681864 atttaa 43681859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 1150003 - 1149939
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | |||||||||||||||||| | |||||||||    
T  1150003 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaatacctatttaag 1149939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 1150062 - 1150125
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||| ||||| |||||||||||||||    
T  1150062 attagtaacttcagggacgaaaattcaaatgacctata-tttgtagggatgaaagacctatttaa 1150125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 9694060 - 9694124
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | ||||||||| |||||||||| |||||||||    
T  9694060 attagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacctatttaag 9694124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 16367222 - 16367159
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||| ||||| |||||||||||||||    
T  16367222 attagtaacttcagggacgaaaattcaaatgacctata-tttgtagggatgaaagacctatttaa 16367159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 17284809 - 17284745
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| |||||| | |||||||||||| | | |||||||||||||||||| | |||||||||    
T  17284809 attagtaacttcagatacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaag 17284745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 17366751 - 17366814
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| ||||||||||| || |||| |||||| ||||||||||| |||||||    
T  17366751 attagtaacttcagggacgaaaattcaaatggactata-tttgcaaggacgaaagacatatttaa 17366814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 582 - 676
Target Start/End: Original strand, 17580620 - 17580715
Alignment:
Q  582 tttgcagtgacagattgaaagaattagtaacttcagggac-aaaaattcaaatga-ttatattttgcagggacgaaagacctatttaaacatttttt 676  Q
    ||||||||| || |||| ||| ||||||||||| |||||| ||||||||||||||  |||| |||| ||||||||||||| ||||||| | ||||||    
T  17580620 tttgcagtggcatattggaaggattagtaactttagggacgaaaaattcaaatgacctata-tttgtagggacgaaagacatatttaagcctttttt 17580715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 22309749 - 22309813
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||    
T  22309749 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaag 22309813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 22731791 - 22731728
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||| |||||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  22731791 attagtaactttagggacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 22731728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 32519221 - 32519157
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | ||||||||||||||||||||  ||||||||    
T  32519221 attagtaatttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 32519157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 41846458 - 41846394
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||| ||| ||||| || |||||||||||| | | ||||||| ||||||||||||||||||||||    
T  41846458 attactaacttcagggacgaaaattcaaatgacctatatttgtagggacgaaagatctatttaag 41846394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 635
Target Start/End: Original strand, 8089756 - 8089799
Alignment:
Q  592 cagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    ||||||| ||| |||||||||||||||||||||||| |||||||    
T  8089756 cagattggaaggattagtaacttcagggacaaaaatgcaaatga 8089799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 457
Target Start/End: Complemental strand, 28599493 - 28599430
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaa 457  Q
    |||||||| ||||  || |||||||||||| ||| ||||||||| |||||||||| ||||||||    
T  28599493 attagtaacttcatggacgaaaattcaaatgatctatatttgcaaggacgaaagacctatttaa 28599430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 384 - 458
Target Start/End: Complemental strand, 45663777 - 45663703
Alignment:
Q  384 attacatcttattagtaagttcagagaa-gaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    ||||||||| |||||||| |||| |||| |||||||||||| | | ||||||||||||||||||||  ||||||||    
T  45663777 attacatctgattagtaacttca-agaacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 45663703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 604 - 669
Target Start/End: Original strand, 4375674 - 4375739
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaa-tgattatattttgcagggacgaaagacctatttaaac 669  Q
    |||||||||||||||||| |||||||||| ||  |||| ||||||| |||||||||| |||||||||    
T  4375674 attagtaacttcagggacgaaaattcaaattgcatata-tttgcagagacgaaagacatatttaaac 4375739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 458
Target Start/End: Complemental strand, 22309478 - 22309433
Alignment:
Q  413 aaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    ||||||||||| | | |||||||||||||||||||| |||||||||    
T  22309478 aaaattcaaatgacctatatttgcagggacgaaagacctatttaag 22309433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 3e-35; HSPs: 101)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 355 - 667
Target Start/End: Complemental strand, 24701567 - 24701273
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||  |||| ||||||| | || ||||||| | |||| ||| ||||| || |||||||||||| | | |||||||||||||||||||| |||||    
T  24701567 aaatattaaccatttgaaaaatggtcctaattacat-tgattaataacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagagctatt 24701469  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaa 554  Q
    |||| ||||||| | ||||||||||||||||||||| |||||||| || | |||| ||| |||||||||||       |||||||| |                
T  24701468 taagccaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattagg------------ 24701381  T
Q  555 atgatatcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacg 653  Q
         | ||||||| ||||||||||||||||||||| ||||||| ||| |||||||||||||||||| |||||||||||||  |||| ||||||| ||||    
T  24701380 -----accaaaagttaaatgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgagctata-tttgcagagacg 24701287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 355 - 559
Target Start/End: Complemental strand, 46545029 - 46544825
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||  | || ||| ||||| |||||||| || |  || |||||||||||| |   ||||||||||||||||||||||||||    
T  46545029 aaatattaatcatttgaaaaatagtcctaattgcatctgattagtaactttatggacgaaaattcaaataacatatatttgcagggacgaaagatctatt 46544930  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaa 554  Q
    |||| ||||||| | || |||||||||||||||||| ||||||||||| | |||| ||| |||||||||||       |||||||| |||||||||||||    
T  46544929 taagccaaccacctcgctcaatcatcacttgccacatgggcaccatgtcgctaatgacagcccacctcagcaaaaaaacctaattaggatcaaaagtcaa 46544830  T
Q  555 atgat 559  Q
    |||||    
T  46544829 atgat 46544825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 355 - 509
Target Start/End: Original strand, 33030420 - 33030574
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||| ||| |||| ||||||||| || ||||||||| |||||||| |||||| | |||||||||||| ||| |||||||||||||||||| | |||||    
T  33030420 aaatatgaatcatttgaaaaatgatcctaattacatctgattagtaacttcagaaacgaaaattcaaatgatctatatttgcagggacgaaaaacctatt 33030519  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataat 509  Q
    ||||||||||||  || ||||||||||||| ||||| |||||||| |||| ||||    
T  33030520 taagtcaaccactctgtccaatcatcacttaccacatgggcaccaagttgctaat 33030574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 25415113 - 25414938
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| |||||||| |||||||||||| | | ||||||||| ||| |||||| |||||||||  || ||| | ||||||||||||||    
T  25415113 attacatctgattagtaacttcagagacgaaaattcaaatgacctatatttgcatggatgaaagacctatttaagcaaatcacctcgcccaatcatcact 25415014  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    || |||| |||||||| || | |||| ||||| |||||||||       |||||||| || |||||||||||||||    
T  25415013 tgtcacatgggcaccacgtcgctaatgacaactcacctcagcaaaaaaacctaattaggaccaaaagtcaaatgat 25414938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 26953370 - 26953195
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| |||||||| |||||||||||| | | ||||||||||||| |||||| ||||||||   |||||| | ||||||||||||||    
T  26953370 attacatctgattagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaaacaaaccacctcgcccaatcatcact 26953271  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| || | |||| ||| |||| ||||||        ||||||| || |||||||||||||||    
T  26953270 tgccacatgggcaccacgtcgctaatgacagcccagctcagcaaaaaaatctaattaggaccaaaagtcaaatgat 26953195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 355 - 525
Target Start/End: Complemental strand, 30830429 - 30830259
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||| ||| | || ||||||||| |||||||| || || || |||||||||||| |   ||||||||||||||||||||  ||||    
T  30830429 aaatattaatcatttgaaatatggtcctaattacatctgattagtaactttagggacgaaaattcaaatgacttatatttgcagggacgaaagacttatt 30830330  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    |||| ||||||| | ||||||||||||||||||||| |||||||| || | |||| ||| |||||| ||||    
T  30830329 taagccaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccaccccagc 30830259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 355 - 525
Target Start/End: Complemental strand, 35312274 - 35312104
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| |  | ||||||| | |||||||| ||||  ||  |||||||||||  || |||||||||||||||||||| |||||    
T  35312274 aaatattaatcatttgaaaaatggtcttaattacatttgattagtaacttcatcgacaaaaattcaaatggtctatatttgcagggacgaaagacctatt 35312175  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    |||  |||||||   | ||||||||||||||||||| ||||||||||| | |||| |||||||||||||||    
T  35312174 taaaccaaccaccccgtccaatcatcacttgccacatgggcaccatgtcgctaatgacaacccacctcagc 35312104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 355 - 524
Target Start/End: Complemental strand, 8890507 - 8890338
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| |||||||||| | ||||||||| |||||||| ||||  || |||||||||||| | | ||||||| ||||| |||| | |||||    
T  8890507 aaatattaatcatttgaaaaatgattttaattacatctcattagtaacttcatggacgaaaattcaaatgacctatatttgaagggaagaaatacctatt 8890408  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcag 524  Q
    ||||  |||||| | | ||||||||||||||||||| ||||||||  | | |||| ||||||||||||||    
T  8890407 taagcgaaccacctcgtccaatcatcacttgccacatgggcaccacatcgctaatgacaacccacctcag 8890338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 558
Target Start/End: Complemental strand, 46849927 - 46849753
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| |   ||||||||| ||| |||||| |||||||||  |||||||| || |||||||||||    
T  46849927 attacatctgattagtaacttcagggacgaaaattcaaatgacatatatttgcaaggatgaaagacctatttaagcaaaccacatcgctcaatcatcact 46849828  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatga 558  Q
    ||||||| |||||||| || | |||| | | |||||||||||       ||||||||||| ||||||||||||||    
T  46849827 tgccacatgggcaccacgtcgctaatgatagcccacctcagcaaaaaaacctaattatgaccaaaagtcaaatga 46849753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 384 - 499
Target Start/End: Original strand, 29042870 - 29042985
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||| ||| |||||| |||||||||  |||||| ||||||||||||||||    
T  29042870 attacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcaaggatgaaagacctatttaagcaaaccaccttgcccaatcatcact 29042969  T
Q  484 tgccacacgggcacca 499  Q
    ||||||| ||||||||    
T  29042970 tgccacatgggcacca 29042985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 384 - 667
Target Start/End: Complemental strand, 33347685 - 33347419
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| | |||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  33347685 attacatctgactagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgcccaatcatcact 33347586  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgatatcaaaagtcaaatgattaaattt 583  Q
    ||||||| ||||||||  | | |||| ||| ||||||||| |       |||||||| || ||||                 ||||||||||||||  ||    
T  33347585 tgccacatgggcaccacatcgctaatgacagcccacctcaacaaaaaaacctaattaggaccaaa-----------------agtcaaatgattaatatt 33347503  T
Q  584 tgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    || || | ||||||| |||||||||||||||||||||| ||| ||||||||| ||||| |||||||||||||||||| |||||||    
T  33347502 tgtaggggcagattggaagaattagtaacttcagggacgaaagttcaaatgacttata-tttgcagggacgaaagacatatttaa 33347419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 384 - 499
Target Start/End: Complemental strand, 46364844 - 46364729
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||| ||||||||||||||||    
T  46364844 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccaccttgcccaatcatcact 46364745  T
Q  484 tgccacacgggcacca 499  Q
    ||||||| ||| ||||    
T  46364744 tgccacatggggacca 46364729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 739334 - 739508
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| |||||  | |||||||||||| | | ||||| ||||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  739334 attacatctgattagtaacttcaggaacgaaaattcaaatgacctatatt-gcagggatgaaagacctatttaagcaaaccacctcgcccaatcatcact 739432  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| || | |||| ||| | |||||||||       |||||||| ||||||||||||||||||    
T  739433 tgccacatgggcaccacgtcgctaatgacagctcacctcagcaaaaaaacctaattaggatcaaaagtcaaatgat 739508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 12577288 - 12577393
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||||||| ||||||||||||| |||| |||||| |||||| ||||| |||||||||||||||||||    
T  12577288 caaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaatttaaatgacttata-tttgcagggacgaaagacc 12577386  T
Q  661 tatttaa 667  Q
    |||||||    
T  12577387 tatttaa 12577393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 19755681 - 19755786
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| ||||||||||||||||| ||||||||||||||  |||| |||||||||||||||||||    
T  19755681 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggataaaaattcaaatgacctata-tttgcagggacgaaagacc 19755779  T
Q  661 tatttaa 667  Q
    |||||||    
T  19755780 tatttaa 19755786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 384 - 525
Target Start/End: Complemental strand, 29980907 - 29980766
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    |||||||||||||||||| || || || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||| | | | ||||||||||||    
T  29980907 attacatcttattagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccgcctcgtccaatcatcact 29980808  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||||| |||||||| ||||  ||| ||| |||||||||||    
T  29980807 tgccacatgggcaccacgttgcaaatgacagcccacctcagc 29980766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 564 - 675
Target Start/End: Complemental strand, 35312080 - 35311969
Alignment:
Q  564 aaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagaccta 662  Q
    |||||||||||||||||||||||| |||||||||| ||  |||||||||||||| ||| |||||||||||||  |||| |||  ||||||||||||||||    
T  35312080 aaagtcaaatgattaaattttgcaatgacagattggaatgattagtaacttcagtgacgaaaattcaaatgacctata-tttatagggacgaaagaccta 35311982  T
Q  663 tttaaacattttt 675  Q
    ||||||| |||||    
T  35311981 tttaaaccttttt 35311969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 563 - 677
Target Start/End: Original strand, 37152815 - 37152929
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacct 661  Q
    |||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||| ||| ||||||||||| || |||| |||||||||||||||||| |    
T  37152815 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatggactata-tttgcagggacgaaagacat 37152913  T
Q  662 atttaaacatttttta 677  Q
    |||||| |||||||||    
T  37152914 atttaagcatttttta 37152929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 384 - 523
Target Start/End: Complemental strand, 49003144 - 49003005
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || | |||||||||| | | ||||||||||||| ||||||  ||||||||  |||||| | ||||||||||||||    
T  49003144 attacatctgattagtaacttcagggacggaaattcaaatgacctatatttgcagggatgaaagacttatttaagaaaaccacctcgcccaatcatcact 49003045  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctca 523  Q
    ||||||| |||||||| || | |||| ||| |||||||||    
T  49003044 tgccacatgggcaccacgtcgctaatgacagcccacctca 49003005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 1040406 - 1040301
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||||||||||||||| | ||||| |||||| |||||||||||     
T  1040406 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttata-tttgcaaggacgaaagaca 1040308  T
Q  661 tatttaa 667  Q
    |||||||    
T  1040307 tatttaa 1040301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 1047312 - 1047207
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||||||||||||||| | ||||| |||||| |||||||||||     
T  1047312 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttata-tttgcaaggacgaaagaca 1047214  T
Q  661 tatttaa 667  Q
    |||||||    
T  1047213 tatttaa 1047207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 37152807 - 37152632
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||  || |||||||||||| |   ||||||||| ||| |||||| ||||||||| ||||||  |  |||||||||||||    
T  37152807 attacatctgattagtaacttcaaggacgaaaattcaaatgacttatatttgcatggatgaaagacctatttaagccaaccagttcacccaatcatcact 37152708  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| || | |||| ||| |||||||||||        ||||||| ||||||||||||||||||    
T  37152707 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggatcaaaagtcaaatgat 37152632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 384 - 497
Target Start/End: Complemental strand, 12577281 - 12577168
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| || ||||||  |||||| | ||||||||||||||    
T  12577281 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctgtttaagcaaaccacctcgcccaatcatcact 12577182  T
Q  484 tgccacacgggcac 497  Q
    ||||||| ||||||    
T  12577181 tgccacatgggcac 12577168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 560 - 667
Target Start/End: Original strand, 29043029 - 29043136
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||  ||||||| | ||||||||||| |||||||||||||||||| ||||||||||| |  |||| ||||||| |||||||||    
T  29043029 atcaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcagggacgaaaattcaaatggcctata-tttgcagagacgaaaga 29043127  T
Q  659 cctatttaa 667  Q
    | |||||||    
T  29043128 catatttaa 29043136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 568 - 667
Target Start/End: Complemental strand, 33030436 - 33030337
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    |||||||||| |  ||||||||| ||||||| |||||||||||||||||||||| |||||||||||||  |||| ||||||||||| |||||||||||||    
T  33030436 tcaaatgattcatatttgcagtggcagattggaagaattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacaaaagacctattta 33030338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 562 - 668
Target Start/End: Complemental strand, 49002984 - 49002878
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| ||||||||||||| |||| |||||||||||||  |||| ||||||||||||||||||     
T  49002984 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctata-tttgcagggacgaaagaca 49002886  T
Q  661 tatttaaa 668  Q
    ||||||||    
T  49002885 tatttaaa 49002878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 1047319 - 1047494
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||| | |||||||| ||||| || |||||||||||| | | ||||||| ||||| |||| ||| |||||||  |||||| | ||||||||||||||    
T  1047319 attacatatgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaatatccatttaagcgaaccacctcgcccaatcatcact 1047418  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |  ||||| || | |||| |||||||||||||||        ||||||| || |||||||||||||||    
T  1047419 tgccacatgtacaccacgtcgctaatgacaacccacctcagctaaaaaatctaattaggaccaaaagtcaaatgat 1047494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 2953572 - 2953467
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||||||| ||||||||||| |||||| |||||||||||||  |||| ||| ||||||||||||||     
T  2953572 caaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaactttagggacgaaaattcaaatgacctata-tttacagggacgaaagaca 2953474  T
Q  661 tatttaa 667  Q
    |||||||    
T  2953473 tatttaa 2953467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 2953733 - 2953558
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||| | |||||||| ||||  || |||||||||||| |   ||||||| ||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  2953733 attacatatgattagtaacttcaaggacgaaaattcaaatgacttatatttgtagggatgaaagacctatttaagcaaaccacctcgcccaatcatcact 2953634  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| | |||||| || | |||| ||| |||||||||||        |||||||||| |||||||||||||||    
T  2953633 tgccacatgtgcaccacgtcgttaatgacagcccacctcagcaaaaaaatctaattatgaccaaaagtcaaatgat 2953558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 2953740 - 2953845
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||| ||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||| |||||||||||||  |||| ||||||||||||||||||     
T  2953740 caaaaatcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacgaaagaca 2953838  T
Q  661 tatttaa 667  Q
    |||||||    
T  2953839 tatttaa 2953845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 26953209 - 26953104
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||||||| |||||||||||||||||| ||||||||||| |  |||| |||||| |||||||||||     
T  26953209 caaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcagggacgaaaattcaaatagtctata-tttgcaaggacgaaagaca 26953111  T
Q  661 tatttaa 667  Q
    |||||||    
T  26953110 tatttaa 26953104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 659
Target Start/End: Original strand, 33030611 - 33030708
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagac 659  Q
    ||||||||||||||||||  ||||||||| ||||||||||| |||||||| |||| |||| |||||||||||||| |||| |||||||| |||||||||    
T  33030611 caaaagtcaaatgattaatatttgcagtggcagattgaaaggattagtaatttcatggacgaaaattcaaatgatctata-tttgcaggaacgaaagac 33030708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 46364682 - 46364577
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  |||| || ||||||| ||||  |||||||||||||||||| |||||||||||||  |||| ||||||||||||||||||     
T  46364682 caaaagtcaaatgattaatatttgtagggacagatggaaaagattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacgaaagaca 46364584  T
Q  661 tatttaa 667  Q
    |||||||    
T  46364583 tatttaa 46364577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 46849934 - 46850039
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||| ||| || ||||||||||||||| |||||||||||||  |||| |||||||||||||||||||    
T  46849934 caaaagtcaaatgattaatatttgcaggggcaaattggaaggatcagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacgaaagacc 46850032  T
Q  661 tatttaa 667  Q
    |||||||    
T  46850033 tatttaa 46850039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 49003151 - 49003256
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||| ||||||||||||  ||||||| | ||||||| ||| ||||||||||||| |||| |||||||||||||  |||| |||||||||||||||||||    
T  49003151 caaaaatcaaatgattaatatttgcagaggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctata-tttgcagggacgaaagacc 49003249  T
Q  661 tatttaa 667  Q
    |||||||    
T  49003250 tatttaa 49003256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 384 - 525
Target Start/End: Original strand, 6056491 - 6056632
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| ||||||  ||||||||  |||||| |  | |||||||||||    
T  6056491 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacttatttaagcaaaccacctcactcaatcatcact 6056590  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    || |||| |||||||| || | |||| ||| |||||||||||    
T  6056591 tgtcacatgggcaccacgtcgctaatgacagcccacctcagc 6056632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 384 - 525
Target Start/End: Complemental strand, 19755674 - 19755533
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    |||| |||| |||||||| ||||| || |||||||||||| | | ||||||| ||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  19755674 attatatctgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaagcaaaccacttcgcccaatcatcact 19755575  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    | ||||| |||||||| ||   |||| ||||||||| |||||    
T  19755574 taccacatgggcaccacgtcactaatgacaacccacgtcagc 19755533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 562 - 665
Target Start/End: Complemental strand, 5926627 - 5926524
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||| ||| |||||||||||||||||| |||||||||||||  |||| ||||||||||||||||||     
T  5926627 caaaagtcaaatgattaatgtttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacgaaagaca 5926529  T
Q  661 tattt 665  Q
    |||||    
T  5926528 tattt 5926524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 559
Target Start/End: Complemental strand, 10019671 - 10019466
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| |  | ||||||| | ||||| || ||||| || |||||||||||| |   |||||||||||||||||| | |||||    
T  10019671 aaatattaatcatttgaaaaatggtcataattacatttgattagcaacttcagggacgaaaattcaaatgacttatatttgcagggacgaaatacctatt 10019572  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc-nnnnnnncctaattatgatcaaaagtca 553  Q
    |||| ||||||  | ||||||||||   |||||||| |||||||| || | |||| ||| |||||||||||        |||||||| ||||||||||||    
T  10019571 taagccaaccatctcgcccaatcatattttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaacctaattaggatcaaaagtca 10019472  T
Q  554 aatgat 559  Q
    ||||||    
T  10019471 aatgat 10019466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 739327 - 739222
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||| ||| ||||||||||||| |||| |||||||||||| | |||| ||||||||||||||| |||    
T  739327 caaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcaaggacgaaaattcaaatggtctata-tttgcagggacgaaaaacc 739229  T
Q  661 tatttaa 667  Q
    |||||||    
T  739228 tatttaa 739222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 5183775 - 5183600
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||| | |||||||| ||||  || |||||||||||| | | ||||||| ||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  5183775 attacatatgattagtaacttcatggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaagcaaaccacctcgcccaatcatcact 5183676  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| | |||||| || | |||| | | |||||||||||        ||||||| || |||||||||||||||    
T  5183675 tgccacatgtgcaccacgtcgctaatgatagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgat 5183600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 5926797 - 5926902
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacc 660  Q
    |||||||||||||||||   ||||||| | ||||||| | | |||||||||||||||||  |||||||||||| | |||| |||||||||||||||||||    
T  5926797 caaaagtcaaatgattactatttgcagaggcagattggacggattagtaacttcagggatgaaaattcaaatggtctata-tttgcagggacgaaagacc 5926895  T
Q  661 tatttaa 667  Q
    |||||||    
T  5926896 tatttaa 5926902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 663
Target Start/End: Original strand, 33347692 - 33347793
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||  | ||||||| ||| ||||||||||||| |||| |||||||||||||  |||| |||||||||||||||||||    
T  33347692 caaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctata-tttgcagggacgaaagacc 33347790  T
Q  661 tat 663  Q
    |||    
T  33347791 tat 33347793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 524
Target Start/End: Complemental strand, 51934073 - 51933903
Alignment:
Q  354 aaaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctat 453  Q
    ||||||||||| |||| ||||||| | || ||||||||| || ||||  ||||  || |||||||||||| |   |||||| ||||||||||||| || |    
T  51934073 aaaatattaatcatttgaaaaatggtcctaattacatctgatcagtagtttcaaggacgaaaattcaaatgacatatatttccagggacgaaagacctgt 51933974  T
Q  454 ttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcag 524  Q
    ||||| ||||||| |  |||||||||||||||||||| || ||||| || | |||| ||| |||| |||||    
T  51933973 ttaagccaaccacctcacccaatcatcacttgccacatggacaccacgtcgctaatgacatcccaactcag 51933903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 412 - 525
Target Start/End: Complemental strand, 34176164 - 34176051
Alignment:
Q  412 gaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataa 511  Q
    |||||||||||| |   |||||||||||||||||||| ||||||||  ||||||  | ||||||||||||||||||||| |||||||| || | |||| |    
T  34176164 gaaaattcaaatgacttatatttgcagggacgaaagacctatttaaaccaaccatctcgcccaatcatcacttgccacatgggcaccacgtcgctaatga 34176065  T
Q  512 caacccacctcagc 525  Q
    ||  ||||||||||    
T  34176064 cagtccacctcagc 34176051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 568 - 667
Target Start/End: Complemental strand, 48380783 - 48380684
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    |||||||||||| ||||||| || ||||||| ||| |||||||||||||| ||| |||||||||||||  |||| ||| || ||||||||||||||||||    
T  48380783 tcaaatgattaatttttgcactggcagattggaaggattagtaacttcagcgacgaaaattcaaatgacctata-tttacaaggacgaaagacctattta 48380685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 6056654 - 6056760
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaactt-cagggacaaaaattcaaat-gattatattttgcagggacgaaagac 659  Q
    |||| |||||||||||||  ||||||| | ||||||||||| ||||||||||| ||||||  ||||||||||| | ||||| ||||||||||||||||||    
T  6056654 caaatgtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttacagggatgaaaattcaaatggcttata-tttgcagggacgaaagac 6056752  T
Q  660 ctatttaa 667  Q
     |||||||    
T  6056753 atatttaa 6056760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 662
Target Start/End: Original strand, 46364849 - 46364951
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||  ||||||| | || |||||||| |||||||| |||| |||| ||||||||||| | ||||| ||||||||| |||||||    
T  46364849 atcaaaagtcaaatgattaatatttgcaggggcatattgaaaggattagtaatttcaaggacgaaaattcaaataacttata-tttgcaggggcgaaaga 46364947  T
Q  659 ccta 662  Q
    ||||    
T  46364948 ccta 46364951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 1047480 - 1047585
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||| ||| |||||||||||||  |||| ||| |||||| |||||||     
T  1047480 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatgacctata-tttacagggatgaaagaca 1047578  T
Q  661 tatttaa 667  Q
    |||||||    
T  1047579 tatttaa 1047585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 5183614 - 5183509
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| ||||||||||| | |||| |||||||||||||  |||||||| |||| |||||||||     
T  5183614 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaactttatggacgaaaattcaaatgacctatatttt-caggaacgaaagaca 5183516  T
Q  661 tatttaa 667  Q
    |||||||    
T  5183515 tatttaa 5183509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 6056484 - 6056379
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| |||| |||| ||| || ||||| || |||||| |||||||||||||  |||| ||||||||||||||||||     
T  6056484 caaaagtcaaatgattaatatttgcagggacatattggaaggatcagtaattttagggacgaaaattcaaatgacctata-tttgcagggacgaaagaca 6056386  T
Q  661 tatttaa 667  Q
    |||||||    
T  6056385 tatttaa 6056379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 8890319 - 8890215
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  |||| |||| ||||||| ||  |||||||||||||||||| || ||||||||||  |||| ||||||||||||||| |||    
T  8890319 caaaagtcaaatgattaatatttggagtggcagattggaaagattagtaacttcagggac-aatattcaaatgacctata-tttgcagggacgaaatacc 8890222  T
Q  661 tatttaa 667  Q
    |||||||    
T  8890221 tatttaa 8890215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 560 - 634
Target Start/End: Complemental strand, 30830240 - 30830166
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatg 634  Q
    ||||||| ||||||||||||||||||| ||| ||||||| ||  |||| ||||||||||||| ||||||||||||    
T  30830240 atcaaaattcaaatgattaaattttgcggtggcagattggaatgattattaacttcagggacgaaaattcaaatg 30830166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 568 - 667
Target Start/End: Original strand, 8890491 - 8890590
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||||||||| |||| ||  |||||| |||||| |||| || ||||||||||  |||| |||||||||||||||||||||||||    
T  8890491 tcaaatgattaatatttgcagtgacatattggaatgattagtcacttcatggacgaatattcaaatgacctata-tttgcagggacgaaagacctattta 8890589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 562 - 656
Target Start/End: Original strand, 25415120 - 25415214
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaa 656  Q
    ||||||||||||| ||||  |||||||  ||| |||| ||| ||||||||||||||| || ||||||||||||| ||||| |||||||||||||||    
T  25415120 caaaagtcaaatggttaatatttgcaggaacatattggaaggattagtaacttcaggaacgaaaattcaaatgacttata-tttgcagggacgaaa 25415214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 5183782 - 5183887
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||| ||| ||| |||||||||||||| ||||||||||| |  |||| ||||||||||| ||||||     
T  5183782 caaaagtcaaatgattaatatttgcaggggcaaattggaaggattcgtaacttcagggacgaaaattcaaatggcctata-tttgcagggacaaaagacg 5183880  T
Q  661 tatttaa 667  Q
    |||||||    
T  5183881 tatttaa 5183887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 29980914 - 29981019
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||| ||||||||||||  ||||||| | || |||| ||| |||||||||||| ||||| |||||||||||||  |||| ||||||  |||||||||||    
T  29980914 caaaaatcaaatgattaatatttgcaggggcaaattggaaggattagtaacttccgggacgaaaattcaaatgacctata-tttgcaaagacgaaagacc 29981012  T
Q  661 tatttaa 667  Q
    |||||||    
T  29981013 tatttaa 29981019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 604 - 669
Target Start/End: Complemental strand, 35312235 - 35312170
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaaac 669  Q
    |||||||||||||  |||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  35312235 attagtaacttcatcgacaaaaattcaaatggtctatattt-gcagggacgaaagacctatttaaac 35312170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 359 - 521
Target Start/End: Original strand, 48380771 - 48380933
Alignment:
Q  359 attaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||| |||| ||||||| | || ||||||||| |||||||| |||   || |||| ||||||| ||  |||||||  ||||| ||| |  ||||||||    
T  48380771 attaatcatttgaaaaatggtcctaattacatctgattagtaacttcgtggacgaaatttcaaatgatatatatttgtggggacaaaaaacatatttaag 48380870  T
Q  459 tcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacct 521  Q
    |||||||| | |  |||||||||||||||||| || ||||| || | |||| |||||||||||    
T  48380871 tcaaccacctcgttcaatcatcacttgccacatggacaccacgtcgctaatgacaacccacct 48380933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 48380959 - 48381064
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatg-attatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||| |||||| | |||| |||||| ||||| |||||| ||| ||||||||||||||     
T  48380959 caaaagtcaaatgattaatatttgcagcggcagattggaaggattaataactttaaggacgaaaatttaaatgaattata-tttacagggacgaaagact 48381057  T
Q  661 tatttaa 667  Q
    |||||||    
T  48381058 tatttaa 48381064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 563 - 667
Target Start/End: Complemental strand, 12577117 - 12577013
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacct 661  Q
    |||||||||||||||||  ||||||| | ||||||||||  |||||||||||||  ||| ||||||||||||   |||||||  |||||||||||||| |    
T  12577117 aaaagtcaaatgattaatatttgcaggggcagattgaaatgattagtaacttcatagacgaaaattcaaatggcctatattta-cagggacgaaagacat 12577019  T
Q  662 atttaa 667  Q
    ||||||    
T  12577018 atttaa 12577013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 560 - 664
Target Start/End: Complemental strand, 37152648 - 37152544
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    |||||||||||||||||||   ||||||  | ||||||| ||| ||||||||||||| |||| |||||||||||||  |||| |||| ||||||||||||    
T  37152648 atcaaaagtcaaatgattagtatttgcacgggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctata-tttgtagggacgaaaga 37152550  T
Q  659 cctatt 664  Q
    | ||||    
T  37152549 catatt 37152544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 358 - 523
Target Start/End: Complemental strand, 52455050 - 52454885
Alignment:
Q  358 tattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaa 457  Q
    ||||||| |||| ||||||| |  | ||||||||| |||||||| || || || |||||||||||| | | || ||||||||||||||| | ||||||||    
T  52455050 tattaatcatttgaaaaatggtcataattacatctgattagtaactttagggatgaaaattcaaatgacctatttttgcagggacgaaatacctatttaa 52454951  T
Q  458 gtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctca 523  Q
    | |||| || |    ||||||||| ||| |||| |||||||| ||   |||| |||||||||||||    
T  52454950 gccaactacctcattcaatcatcatttgtcacatgggcaccacgtcactaatgacaacccacctca 52454885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 5926839 - 5926903
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || ||||||||||||  || |||||||||||||||||||| |||||||||    
T  5926839 attagtaacttcagggatgaaaattcaaatggtctatatttgcagggacgaaagacctatttaag 5926903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 10019632 - 10019569
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||| |||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  10019632 attagcaacttcagggacgaaaattcaaatgacttata-tttgcagggacgaaatacctatttaa 10019569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 24701587 - 24701650
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| ||||||||||| | ||||| |||||||||| |||||||||||||||    
T  24701587 attagtaacttcagggacgaaaattcaaatggcttata-tttgcagggatgaaagacctatttaa 24701650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 669
Target Start/End: Complemental strand, 29980747 - 29980640
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||  ||||||||||||| || | |||||||||||||  |||| ||| || |||||||||||     
T  29980747 caaaagtcaaatgattaatatttgcaggggcagattggaaagattagtaacttcatgggcgaaaattcaaatgacctata-tttacaaggacgaaagaca 29980649  T
Q  661 tatttaaac 669  Q
    |||||||||    
T  29980648 tatttaaac 29980640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 30830390 - 30830327
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||| |||||||    
T  30830390 attagtaactttagggacgaaaattcaaatgacttata-tttgcagggacgaaagacttatttaa 30830327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 669
Target Start/End: Complemental strand, 34176176 - 34176117
Alignment:
Q  610 aacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaaac 669  Q
    ||||||| |||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  34176176 aacttcaaggacgaaaattcaaatgacttatattt-gcagggacgaaagacctatttaaac 34176117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 46364834 - 46364771
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  46364834 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 46364771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 604 - 670
Target Start/End: Complemental strand, 26953360 - 26953294
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaaaca 670  Q
    |||||||||||||| ||| |||||||||||||  ||||||| ||||||| ||||||||||||||||||    
T  26953360 attagtaacttcagagacgaaaattcaaatgacctatattt-gcagggatgaaagacctatttaaaca 26953294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 562 - 656
Target Start/End: Original strand, 26953377 - 26953471
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaa 656  Q
    ||||||||||||||||||  ||||||    ||||||| ||||||||||||||||||| |  ||||||||||| | ||||| |||||||||||||||    
T  26953377 caaaagtcaaatgattaatatttgcaagagcagattggaagaattagtaacttcaggaatgaaaattcaaatggtttata-tttgcagggacgaaa 26953471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 592 - 635
Target Start/End: Complemental strand, 46849736 - 46849693
Alignment:
Q  592 cagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    |||||||||||||||| ||||||||||||| |||||||||||||    
T  46849736 cagattgaaagaattaataacttcagggacgaaaattcaaatga 46849693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 560 - 618
Target Start/End: Complemental strand, 10019482 - 10019424
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagg 618  Q
    |||||||||||||||||||||||||||| |   |||||| ||| |||||||||||||||    
T  10019482 atcaaaagtcaaatgattaaattttgcaatagtagattggaaggattagtaacttcagg 10019424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 635
Target Start/End: Original strand, 739514 - 739567
Alignment:
Q  582 tttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    ||||||| ||||||||||||| ||||||||||||| | || |||||||||||||    
T  739514 tttgcagggacagattgaaaggattagtaacttcatgtacgaaaattcaaatga 739567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 559 - 667
Target Start/End: Complemental strand, 6334767 - 6334659
Alignment:
Q  559 tatcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaag 657  Q
    ||||||||| |||||||||||  ||||||||| ||||| | ||| ||||||||||| |   || |||||||||||| | |||| |||||||||| |||||    
T  6334767 tatcaaaagccaaatgattaatatttgcagtggcagatcggaaggattagtaactttaacaacgaaaattcaaatggtctata-tttgcagggatgaaag 6334669  T
Q  658 acctatttaa 667  Q
    || |||||||    
T  6334668 acttatttaa 6334659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 46849979 - 46850040
Alignment:
Q  397 agtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    ||||| ||||| || |||||||||||| | | |||||||||||||||||||| |||||||||    
T  46849979 agtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 46850040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 2953723 - 2953660
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||| |||| ||||||||||||| ||||| |||| ||||| |||||||||||||||    
T  2953723 attagtaacttcaaggacgaaaattcaaatgacttata-tttgtagggatgaaagacctatttaa 2953660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 2953782 - 2953846
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | ||||||||||||||||||||  ||||||||    
T  2953782 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 2953846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 6056501 - 6056564
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||| ||||||| |||||||    
T  6056501 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaagacttatttaa 6056564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 12577271 - 12577208
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||| ||||||||| |||||    
T  12577271 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaagacctgtttaa 12577208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 19755664 - 19755601
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||| ||||| |||||||||||||||    
T  19755664 attagtaacttcagggacgaaaattcaaatgacctata-tttgtagggatgaaagacctatttaa 19755601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 19755723 - 19755787
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| ||  ||||||||||| | | |||||||||||||||||||| |||||||||    
T  19755723 attagtaacttcagggataaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 19755787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 25414910 - 25414846
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| |||||||||||||||||||||   | ||||||| ||||||||||||  ||||||||    
T  25414910 attagtaacttcagagaagaaaattcaaatggcctatatttgtagggacgaaagacatatttaag 25414846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 29980897 - 29980834
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||| |||||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  29980897 attagtaactttagggacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 29980834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 33030400 - 33030336
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | |||||||||||||| ||||| |||||||||    
T  33030400 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacaaaagacctatttaag 33030336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 33030459 - 33030522
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||||  || |||||||||||||| ||||||| |||||||||||| ||||||||||    
T  33030459 attagtaacttcagaaacgaaaattcaaatgatctatattt-gcagggacgaaaaacctatttaa 33030522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 37152797 - 37152734
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||| |||| ||||||||||||| ||||| |||||| ||| |||||||||||||||    
T  37152797 attagtaacttcaaggacgaaaattcaaatgacttata-tttgcatggatgaaagacctatttaa 37152734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 37152856 - 37152920
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| |||||||| ||||||||||||   | ||||||||||||||||||||  ||||||||    
T  37152856 attagtaacttcagagacgaaaattcaaatggactatatttgcagggacgaaagacatatttaag 37152920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 46364640 - 46364576
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | ||||||||||||||||||||  ||||||||    
T  46364640 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 46364576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 46849917 - 46849854
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||||| ||| |||||||||||||||    
T  46849917 attagtaacttcagggacgaaaattcaaatgacatata-tttgcaaggatgaaagacctatttaa 46849854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 49003193 - 49003257
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||  || |||||||||||| | | |||||||||||||||||||| |||||||||    
T  49003193 attagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 49003257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 739344 - 739406
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgattatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||||| || |||||||||||||   ||| ||||||||| |||||||||||||||    
T  739344 attagtaacttcaggaacgaaaattcaaatga-cctatattgcagggatgaaagacctatttaa 739406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 635
Target Start/End: Original strand, 46545013 - 46545080
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    ||||||||||||  ||||||||| || | || ||| |||||||||||||||||| ||| |||||||||    
T  46545013 tcaaatgattaatatttgcagtggcaaaatggaaggattagtaacttcagggacgaaacttcaaatga 46545080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 394 - 448
Target Start/End: Complemental strand, 5926585 - 5926531
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaaga 448  Q
    |||||||| ||||| || |||||||||||| | | ||||||||||||||||||||    
T  5926585 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaaga 5926531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 561 - 635
Target Start/End: Complemental strand, 37152542 - 37152468
Alignment:
Q  561 tcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    ||||||||||||||||||   ||||||  | || |||| ||| ||||||||||||| |||| |||||||||||||    
T  37152542 tcaaaagtcaaatgattagtatttgcaagggcatattggaaggattagtaacttcatggacgaaaattcaaatga 37152468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 562 - 616
Target Start/End: Complemental strand, 49989903 - 49989849
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttca 616  Q
    ||||||||||||||||||  ||||||| | ||||||||||| |||| ||||||||    
T  49989903 caaaagtcaaatgattaatatttgcagaggcagattgaaaggattaataacttca 49989849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 443 - 513
Target Start/End: Original strand, 49989967 - 49990037
Alignment:
Q  443 gaaagatctatttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataaca 513  Q
    |||||| |||||||||  |||||| | |||||||||||||||| |||| |||||||| || | ||||||||    
T  49989967 gaaagacctatttaagcaaaccacctcgcccaatcatcacttgtcacatgggcaccacgtcgctaataaca 49990037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 635
Target Start/End: Complemental strand, 8419808 - 8419743
Alignment:
Q  570 aaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    |||||||||||||||||| || | | |||||| ||||||||| || |||||| ||| |||||||||    
T  8419808 aaatgattaaattttgcaatggctgtttgaaataattagtaagtttagggaccaaacttcaaatga 8419743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 355
Target Start/End: Original strand, 29980653 - 29980682
Alignment:
Q  326 tttcgtccttgtaaatataggtcatttgaa 355  Q
    ||||||||||||||||||||||||||||||    
T  29980653 tttcgtccttgtaaatataggtcatttgaa 29980682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 355
Target Start/End: Original strand, 48380695 - 48380724
Alignment:
Q  326 tttcgtccttgtaaatataggtcatttgaa 355  Q
    ||||||||||||||||||||||||||||||    
T  48380695 tttcgtccttgtaaatataggtcatttgaa 48380724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 4e-34; HSPs: 87)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 37343051 - 37342876
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||| |  |||||||||||||    
T  37343051 attacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcacccaatcatcact 37342952  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| ||||||||||| | |||| |||||||||||||||       |||||||| || |||||||||||||||    
T  37342951 tgccacatgggcaccatgtcgctaatgacaacccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgat 37342876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 41802085 - 41801910
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||| ||  ||||| || ||||||||||||   | ||||||||||||| |||||| |||||||||| ||||||||  |||||||||||||    
T  41802085 attacatctgattattagcttcagggacgaaaattcaaatggcctatatttgcagggatgaaagacctatttaagtaaaccacatcacccaatcatcact 41801986  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||  |||||||| || | |||||||| |||||||||||       |||||||||||||||||||||||||||    
T  41801985 tgccacgtgggcaccacgtcgctaataacagcccacctcagcaaaaaaacctaattatgatcaaaagtcaaatgat 41801910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 38619908 - 38619805
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||| |||||||||||||| |||| |||||||| ||||||||    
T  38619908 atcaaaagtcaaatgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgatctata-tttgcaggaacgaaaga 38619810  T
Q  659 cctat 663  Q
    |||||    
T  38619809 cctat 38619805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 384 - 678
Target Start/End: Complemental strand, 35163771 - 35163489
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| |||||  | |||||||||||| | | ||||||  ||||||||||||  |||||||| ||||||| ||||||||||||||||    
T  35163771 attacatctgattagtaacttcagttacgaaaattcaaatgacctatatttatagggacgaaagacttatttaagccaaccaccttgcccaatcatcact 35163672  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc-----nnnnnnncctaattatgatcaaaagtcaaatgatatcaaaagtcaaatgatta 578  Q
    ||||||| |||||||| || | |||| ||| |||||||||||            ||||||||||| ||||||||||                 |||||||    
T  35163671 tgccacatgggcaccacgtcgctaatgacaccccacctcagcaaaaaaaaaaaacctaattatgaccaaaagtcaa-----------------atgatta 35163589  T
Q  579 aattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacctatttaaacatttttta 677  Q
    |||||||||||| ||||||||||| || |||||||||| |||| ||||||||||| | ||||| |||||||||| ||||||||||||||||| ||| |||    
T  35163588 aattttgcagtggcagattgaaaggatcagtaacttcaaggacgaaaattcaaatggcttata-tttgcagggatgaaagacctatttaaacctttatta 35163490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 11478260 - 11478435
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||||| ||||||||||||||    
T  11478260 attacatctgattagtaacttcagcgacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacatcgcccaatcatcact 11478359  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| || | |||| |||  ||||||||||       |||||||| || ||||| |||||||||    
T  11478360 tgccacatgggcaccacgtcgctaatgacagtccacctcagcaaaaaaacctaattaggaccaaaaatcaaatgat 11478435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 355 - 671
Target Start/End: Original strand, 22763681 - 22763981
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatca-atatttgcagggacgaaagatctat 453  Q
    |||||||||| |||| ||||||| | || |||| |||| |||||||| ||||| || |||||||||||| | || |||||||||||||||||||| ||||    
T  22763681 aaatattaatcatttgaaaaatggtcctaattagatctgattagtaacttcagggacgaaaattcaaat-agcagatatttgcagggacgaaagacctat 22763779  T
Q  454 ttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtca 553  Q
    ||||| ||||||| | |||||||||||| |||||||| | |||||| || | |||| ||| |||||||||||          ||        ||||| ||    
T  22763780 ttaagccaaccacctcgcccaatcatcatttgccacatgagcaccacgtcgctaatgacagcccacctcagca---------aa--------aaaagcca 22763862  T
Q  554 aatgat-atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcaggga 651  Q
    ||| || | ||||||||||||||||||  ||| || |||||||||| ||| |||||||||||||| ||| ||||||||||| | |||||   ||||||||    
T  22763863 aattatgaccaaaagtcaaatgattaatatttacaatgacagattggaaggattagtaacttcagagacgaaaattcaaatggtttata-gctgcaggga 22763961  T
Q  652 cgaaagacctatttaaacat 671  Q
    ||||||| ||||||||||||    
T  22763962 cgaaagatctatttaaacat 22763981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 355 - 525
Target Start/End: Original strand, 31689981 - 31690151
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||| ||||| |||| ||||||  | || ||||||||| |||||||| ||||| || |||||||||||| | | |||||| ||||||||||| | |||||    
T  31689981 aaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattttcagggacgaaaaacctatt 31690080  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    |||| ||||||| | ||||||||||||||||||||| ||||| || ||   |||| |||||||||||||||    
T  31690081 taagacaaccacttcgcccaatcatcacttgccacatgggcatcacgtcactaatgacaacccacctcagc 31690151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 525
Target Start/End: Original strand, 20096135 - 20096276
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| ||||||||||||||| | | ||||||| ||||| |||||| |||||||||  |||||| |  |||||||||||||    
T  20096135 attacatctgattagtaacttcagggaagaaaattcaaatgacctatatttgtagggatgaaagacctatttaagcaaaccacctctcccaatcatcact 20096234  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||||| |||||||| || | |||| ||| |||||||||||    
T  20096235 tgccacatgggcaccacgtcgctaatgacagcccacctcagc 20096276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 562 - 669
Target Start/End: Complemental strand, 20096128 - 20096021
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||| ||| ||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  20096128 caaaagtcaaatgattaatatttgcagaggcaaattggaaggattagtaacttcagggacaaaaattcaaatgacatata-tttgcagggacgaaagacc 20096030  T
Q  661 tatttaaac 669  Q
    |||||||||    
T  20096029 tatttaaac 20096021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 396 - 676
Target Start/End: Original strand, 41182023 - 41182286
Alignment:
Q  396 tagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttgccacacgggc 495  Q
    |||||| ||||| || |||||||||||| | | |||||||||||||||||||| |||||||||  |||||| | |||||||||||| |||||||| ||||    
T  41182023 tagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcaaaccacctcgcccaatcatcatttgccacatgggc 41182122  T
Q  496 accatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgatatcaaaagtcaaatgattaaattttgcagtgacaga 595  Q
    |||| || | |||| ||| |||||||| ||       |||||||| || ||||                 ||||||||||||||  ||||||| | ||||    
T  41182123 accacgtcgctaatgacagcccacctcggcaaaaaaacctaattaggaccaaa-----------------agtcaaatgattaatatttgcaggggcaga 41182205  T
Q  596 ttgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaaacatttttt 676  Q
    ||||||  |||||||||||||||||| |||||||||||||  |||| |||||||||||||||||| ||||||| | ||||||    
T  41182206 ttgaaatgattagtaacttcagggacgaaaattcaaatgacatata-tttgcagggacgaaagacatatttaagcctttttt 41182286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 355 - 525
Target Start/End: Complemental strand, 40422458 - 40422289
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||||| ||||| || |||||||||||| | | |||||||||||||| ||||| |||||    
T  40422458 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggac-aaagacctatt 40422360  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    |||| ||||||| |  ||||||||||| |||| ||| |||||||| || | |||| ||| |||| ||||||    
T  40422359 taagccaaccacctctcccaatcatcaattgcaacatgggcaccacgtcgctaatgacagcccatctcagc 40422289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 40525622 - 40525797
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | |||||| |||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  40525622 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaagacctatttaagcaaaccacctcgcccaatcatcact 40525721  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| ||||||||  | | |||| ||| ||||||||| |       |||||||| || |||||||||||||||    
T  40525722 tgccacatgggcaccacttcgctaatgacatcccacctcatcaaaaaaacctaattaggaccaaaagtcaaatgat 40525797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 43866826 - 43867001
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| ||||||  ||||||||  |||||| |  |||||||||||||    
T  43866826 attacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacttatttaagcaaaccacctcacccaatcatcact 43866925  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| |  | |||| ||| |||||||||||       |||||||| || |||||||||||||||    
T  43866926 tgccacatgggcaccacgccgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgat 43867001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 667
Target Start/End: Complemental strand, 23424622 - 23424515
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||  ||||||| | |||||||  |||||||||||||||||||||||||||||||||||  |||| ||| |||||| ||||||    
T  23424622 atcaaaagtcaaatgattaatatttgcaggggcagattgttagaattagtaacttcagggacaaaaattcaaatgacctata-tttacagggatgaaaga 23424524  T
Q  659 cctatttaa 667  Q
    |||||||||    
T  23424523 cctatttaa 23424515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 563 - 674
Target Start/End: Original strand, 29190436 - 29190547
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacct 661  Q
    |||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||| || ||||||||||||| | |||| ||||||||||||||||||||    
T  29190436 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagataaaaattcaaatggtctata-tttgcagggacgaaagacct 29190534  T
Q  662 atttaaacatttt 674  Q
    |||||||| ||||    
T  29190535 atttaaacctttt 29190547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 547711 - 547816
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  |||| |||| ||||||| ||| ||||||||||| |||||| |||||||||||||| |||| ||||||||||||||||| |    
T  547711 caaaagtcaaatgattaatatttgtagtggcagattggaaggattagtaactttagggacgaaaattcaaatgatctata-tttgcagggacgaaagatc 547809  T
Q  661 tatttaa 667  Q
    |||||||    
T  547810 tatttaa 547816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 11478253 - 11478148
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||||||| ||||||||||||| |||| |||||||||||||  |||| ||||||||||||||| |||    
T  11478253 caaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatgacctata-tttgcagggacgaaaaacc 11478155  T
Q  661 tatttaa 667  Q
    |||||||    
T  11478154 tatttaa 11478148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 384 - 490
Target Start/End: Original strand, 23424627 - 23424733
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| ||| ||||||||||||| |||||| |||||||||  | |||| |||| |||||||||||    
T  23424627 attacatctgattagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagacctatttaagcaagccaccttgctcaatcatcact 23424726  T
Q  484 tgccaca 490  Q
    |||||||    
T  23424727 tgccaca 23424733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 40525615 - 40525510
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||||| ||||||| ||| |||||||||||||||||| |||||||||||||  |||| |||||||| |||||||||     
T  40525615 caaaagtcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgacatata-tttgcaggaacgaaagact 40525517  T
Q  661 tatttaa 667  Q
    |||||||    
T  40525516 tatttaa 40525510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 384 - 489
Target Start/End: Original strand, 25287907 - 25288012
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  25287907 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagaaaaccacctcgcccaatcatcact 25288006  T
Q  484 tgccac 489  Q
    ||||||    
T  25288007 tgccac 25288012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 355 - 499
Target Start/End: Complemental strand, 15716174 - 15716030
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| |  | ||||||||| |||||||| |||||||| |||||||||||| | | |||||||||||||  ||||| |||||    
T  15716174 aaatattaatcatttgaaaaatggtcataattacatctgattagtaacttcagagacgaaaattcaaatgacctatatttgcagggataaaagacctatt 15716075  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    |||   |||||| | || |||||||||||||||||| | ||||||    
T  15716074 taaactaaccacctcgctcaatcatcacttgccacatgagcacca 15716030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 384 - 524
Target Start/End: Complemental strand, 29190428 - 29190289
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| || || || |||||||||||| | | ||||||||||||| |||||| ||||||||| ||| ||| | || |||||||||||    
T  29190428 attacatctgattagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag-caaacacctcgctcaatcatcact 29190330  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcag 524  Q
    ||||||| |||||||| || | ||||  |||||||||||||    
T  29190329 tgccacatgggcaccacgtcgctaatggcaacccacctcag 29190289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 7662 - 7487
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||| | ||||| || |||||||||||| | | |||||| |||||| |||||  |||||||||  |||||| | ||||||||||||||    
T  7662 attacatctgattagtgacttcagggacgaaaattcaaatgacctatatttacagggatgaaaggcctatttaagcaaaccacctcgcccaatcatcact 7563  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| | |||||| || | |||| |||  |||| |||||       ||||||||||| |||||||||||||||    
T  7562 tgccacatgagcaccacgtcgctaatgacagtccacttcagcaaaaaaacctaattatgaccaaaagtcaaatgat 7487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 38600226 - 38600331
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||| ||||||||||||||||||||||| | | ||||||| |||||||||||||||||| ||| |||||||||  |||| |||||||||||||||  ||    
T  38600226 caaaactcaaatgattaaattttgcagtggctgtttgaaaggattagtaacttcagggacgaaatttcaaatgacctata-tttgcagggacgaaatgcc 38600324  T
Q  661 tatttaa 667  Q
    |||||||    
T  38600325 tatttaa 38600331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 40422268 - 40422163
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||||| ||||||| ||| |||||| ||||||| ||| |||||||| ||||  |||| |||||||||||||||||||    
T  40422268 caaaagtcaaatgattaatatttgcagtggcagattggaaggattagttacttcagagacgaaaattcatatgacctata-tttgcagggacgaaagacc 40422170  T
Q  661 tatttaa 667  Q
    |||||||    
T  40422169 tatttaa 40422163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 384 - 521
Target Start/End: Complemental strand, 547704 - 547567
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||  || |||||||||||| | | ||| ||||||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  547704 attacatctgattagtaacttcaaggacgaaaattcaaatgacctataattgcagggatgaaagacctatttaagcaaaccacctcgcccaatcatcact 547605  T
Q  484 tgccacacgggcaccatgttgataataacaacccacct 521  Q
    || |||| ||||| || || | |||| |||||||||||    
T  547604 tgtcacatgggcatcacgtcgctaatgacaacccacct 547567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 384 - 525
Target Start/End: Complemental strand, 36623622 - 36623481
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||| ||  |||||  |  |||||||||||||    
T  36623622 attacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctatttgagcaaaccatctcacccaatcatcact 36623523  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||||| |||||||| || | |||| ||| |||| ||||||    
T  36623522 tgccacatgggcaccacgtcgctaatgacagcccaactcagc 36623481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 568 - 667
Target Start/End: Original strand, 40422442 - 40422541
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  ||||||||| ||||||  ||| |||||||||||||||||| |||||||||||||  |||| |||||||||| ||||||||||||||    
T  40422442 tcaaatgattaatatttgcagtggcagatttgaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaagacctattta 40422540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 667
Target Start/End: Complemental strand, 41801926 - 41801819
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||  ||||||| | ||||||| ||| ||||||||||||||| || |||||||||||||  |||| ||||||||||||||| |    
T  41801926 atcaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcaggaacgaaaattcaaatgacctata-tttgcagggacgaaaaa 41801828  T
Q  659 cctatttaa 667  Q
    | |||||||    
T  41801827 catatttaa 41801819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 562 - 676
Target Start/End: Original strand, 9632579 - 9632693
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||| ||| |||| |||||||| |||||||| |||| ||| ||||||||||||| |||| |||||||||||||  |||| ||||||||||| |||||||    
T  9632579 caaaactcagatgactaaattttacagtgacacattggaaggattagtaacttcaaggacgaaaattcaaatgacctata-tttgcagggacaaaagacc 9632677  T
Q  661 tatttaaacatttttt 676  Q
    ||||||| | ||||||    
T  9632678 tatttaagcctttttt 9632693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 7501 - 7396
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  |||| || ||||  ||| |||||||||||||||||||||  |||||||||||||  |||| ||||||||||||||||||     
T  7501 caaaagtcaaatgattaatatttgtagggacatgttggaagaattagtaacttcagggaagaaaattcaaatgacctata-tttgcagggacgaaagaca 7403  T
Q  661 tatttaa 667  Q
    |||||||    
T  7402 tatttaa 7396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 7669 - 7774
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||| ||| ||||||||||||| |||| ||||||||||| |  |||| |||||||||||||||||||    
T  7669 caaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcatggacgaaaattcaaatggcctata-tttgcagggacgaaagacc 7767  T
Q  661 tatttaa 667  Q
    |||||||    
T  7768 tatttaa 7774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 355 - 485
Target Start/End: Original strand, 13566496 - 13566626
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| || | ||||||||| |||||||| ||||  || |||||||||||| | |  ||||||||| || |||||| | |||    
T  13566496 aaatattaatcatttgaaaaatggttataattacatctgattagtaaattcaaggacgaaaattcaaatgacctgtatttgcagtgatgaaagaccaatt 13566595  T
Q  455 taagtcaaccacattgcccaatcatcacttg 485  Q
    |||||||||||| | | ||||||||||||||    
T  13566596 taagtcaaccacctcggccaatcatcacttg 13566626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 36623460 - 36623355
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  |||||||   ||||||||||| |||||||||||||||||| ||||||||||| |  |||| ||||||||||||||| ||     
T  36623460 caaaagtcaaatgattaatatttgcaggagcagattgaaaggattagtaacttcagggacgaaaattcaaatggcctata-tttgcagggacgaaaaaca 36623362  T
Q  661 tatttaa 667  Q
    |||||||    
T  36623361 tatttaa 36623355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 36623629 - 36623734
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||| |||||||||||| ||||||||| ||||||||||| |  |||| ||||||||||||||||||     
T  36623629 caaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctata-tttgcagggacgaaagaca 36623727  T
Q  661 tatttaa 667  Q
    |||||||    
T  36623728 tatttaa 36623734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 37343058 - 37343163
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||| |||||||||||| ||||||||| |||||||||||||  |||| ||||||||| ||||||||     
T  37343058 caaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatgacctata-tttgcaggggcgaaagaca 37343156  T
Q  661 tatttaa 667  Q
    |||||||    
T  37343157 tatttaa 37343163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 669
Target Start/End: Complemental strand, 37713798 - 37713697
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||| ||  ||||||||||||||| |||||||| |||| ||||||||||||| ||||| |||  ||||||||||||||||||||    
T  37713798 tcaaatgattaatatttgcaatggtagattgaaagaattaataacttcatggacgaaaattcaaatgacttata-tttatagggacgaaagacctattta 37713700  T
Q  667 aac 669  Q
    |||    
T  37713699 aac 37713697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 41251231 - 41251126
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  |||| || |||| |||| ||| |||||||||||||| ||| ||||||||| |||  |||| |||||||||||||||||||    
T  41251231 caaaagtcaaatgattaatatttgtagggacatattggaaggattagtaacttcagagacgaaaattcaattgacctata-tttgcagggacgaaagacc 41251133  T
Q  661 tatttaa 667  Q
    |||||||    
T  41251132 tatttaa 41251126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 43866819 - 43866714
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||| |||||||||||| ||||||||| ||||||||||| |  |||| ||||||||||||||||||     
T  43866819 caaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctata-tttgcagggacgaaagaca 43866721  T
Q  661 tatttaa 667  Q
    |||||||    
T  43866720 tatttaa 43866714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 25287900 - 25287795
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgattatattttgcagggacgaaagacct 661  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||| ||||||||||||   |   ||| |||||||||||||| |    
T  25287900 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggccaatatttacagggacgaaagacat 25287801  T
Q  662 atttaa 667  Q
    ||||||    
T  25287800 atttaa 25287795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 26739825 - 26739715
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat----tatat-tttgcagggacgaaa 656  Q
    |||| |||||||||||||  ||||||| |||| |||||||| |||||||| ||||||||| ||||||||||||||    | ||| ||| |||||||||||    
T  26739825 caaacgtcaaatgattaatatttgcagggacatattgaaaggattagtaatttcagggacgaaaattcaaatgatctgatctatatttacagggacgaaa 26739726  T
Q  657 gacctatttaa 667  Q
    |||||||||||    
T  26739725 gacctatttaa 26739715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 355 - 499
Target Start/End: Original strand, 23514107 - 23514251
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||  |||||||  ||||  || ||||||||||||  || |||||| ||||||||||||| |||||    
T  23514107 aaatattaatcatttgaaaaatggtcctaattacatcagattagtagcttcatggacgaaaattcaaatagtctatatttacagggacgaaagaactatt 23514206  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    |||| ||| ||  |  |||||||||||||||||||| || |||||    
T  23514207 taagccaatcatctcacccaatcatcacttgccacatggacacca 23514251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 562 - 669
Target Start/End: Original strand, 27857018 - 27857125
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||  | ||||||| ||  |||||||||||||||||| ||||||||||| |  |||| ||||||||||||||||||     
T  27857018 caaaagtcaaatgattaatatttgcaagggcagattggaatgattagtaacttcagggacgaaaattcaaatggcctata-tttgcagggacgaaagaca 27857116  T
Q  661 tatttaaac 669  Q
    |||||||||    
T  27857117 tatttaaac 27857125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 355 - 458
Target Start/End: Original strand, 9632414 - 9632517
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||| | |||| ||||||||| |||||||| ||||| || ||||||||||||  || | |||||||||||||||||| || ||    
T  9632414 aaatattaatcatttgaaaaaaggttctaattacatctgattagtaacttcagtgacgaaaattcaaatggtctagatttgcagggacgaaagacctgtt 9632513  T
Q  455 taag 458  Q
    ||||    
T  9632514 taag 9632517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 395 - 516
Target Start/End: Original strand, 41251249 - 41251370
Alignment:
Q  395 ttagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttgccacacggg 494  Q
    ||||||| ||||  || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||| | || |||||||||||||||| | |||    
T  41251249 ttagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgctcaatcatcacttgccatatggg 41251348  T
Q  495 caccatgttgataataacaacc 516  Q
    ||||| || | |||| ||||||    
T  41251349 caccacgtcgctaatgacaacc 41251370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 562 - 634
Target Start/End: Complemental strand, 547538 - 547466
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatg 634  Q
    ||||||| ||||||||||  ||||||| | ||||||| ||| ||||||||||||||||||||||||| |||||    
T  547538 caaaagtgaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaatttaaatg 547466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 547753 - 547817
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| || || || |||||||||||| ||| ||||||||||||||||||||||||||||||    
T  547753 attagtaactttagggacgaaaattcaaatgatctatatttgcagggacgaaagatctatttaag 547817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 568 - 667
Target Start/End: Complemental strand, 9632430 - 9632331
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||| ||||| | || ||| |||||||||||||||||| |||||||||||||  |||| |||||| |||| |||||||||||||    
T  9632430 tcaaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcaaggacaaaagacctattta 9632332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 23424637 - 23424700
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||| |||| |||||||||| |||||||||||||||    
T  23424637 attagtaacttcagggacgaaaattcaaatgatctata-tttgcagggatgaaagacctatttaa 23424700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 415 - 499
Target Start/End: Original strand, 27856888 - 27856972
Alignment:
Q  415 aattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    ||||||||| ||  ||||||||||||| |||||| |||||||||  |||||| | || |||||||||||||||||| ||||||||    
T  27856888 aattcaaatgatttatatttgcagggatgaaagacctatttaagcaaaccacctcgctcaatcatcacttgccacatgggcacca 27856972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 568 - 667
Target Start/End: Complemental strand, 31689997 - 31689898
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  ||||||||| || |||| ||| ||| ||||||||| |||| |||||||||||| | |||| ||||||||||| |||||||||||||    
T  31689997 tcaaatgattaacatttgcagtggcatattggaaggattggtaacttcatggacgaaaattcaaatggtctata-tttgcagggacaaaagacctattta 31689899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 562 - 634
Target Start/End: Complemental strand, 37342890 - 37342818
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatg 634  Q
    ||||||||||||||||||  ||||||| | | ||||||||| ||||||||||||||| || ||||||||||||    
T  37342890 caaaagtcaaatgattaatatttgcaggggcggattgaaaggattagtaacttcaggaacgaaaattcaaatg 37342818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 26739993 - 26740099
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtga-cagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagac 659  Q
    ||||||||||||||||||  |||| || |  ||||||| ||| ||||||||||||| |||| |||||||||||||  |||| ||||||||||||||||||    
T  26739993 caaaagtcaaatgattaatatttgtagggggcagattgcaaggattagtaacttcatggacgaaaattcaaatgacctata-tttgcagggacgaaagac 26740091  T
Q  660 ctatttaa 667  Q
     |||||||    
T  26740092 atatttaa 26740099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 355 - 458
Target Start/End: Original strand, 37713782 - 37713885
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||  |||||||| ||||| || ||||||||| || | | ||||||||| ||||||||||| ||||    
T  37713782 aaatattaatcatttgaaaaatggtcctaattacatccgattagtaacttcagggacgaaaattcatatgacctatatttgcatggacgaaagatatatt 37713881  T
Q  455 taag 458  Q
    ||||    
T  37713882 taag 37713885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 23424788 - 23424893
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||| ||||||||||||  ||||||| | ||||||| ||  |||||||||||||||||| ||||||||||| |  |||| |||||||| |||||||||     
T  23424788 caaaaatcaaatgattaatatttgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatggcctata-tttgcaggaacgaaagaca 23424886  T
Q  661 tatttaa 667  Q
    |||||||    
T  23424887 tatttaa 23424893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 41251402 - 41251507
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| |  |||||||||  ||||||||||||| ||||  |||||||||| | ||||| |||||||||||||||||      
T  41251402 caaaagtcaaatgattaatatttgcaggggtagattgaaatgattagtaacttcatggacggaaattcaaatggtttata-tttgcagggacgaaagata 41251500  T
Q  661 tatttaa 667  Q
    |||||||    
T  41251501 tatttaa 41251507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 582 - 667
Target Start/End: Original strand, 43867007 - 43867092
Alignment:
Q  582 tttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    ||||||| | ||||||||||| ||||||||||||| |||| |||||||||||| | |||| ||||||||||||||| || |||||||    
T  43867007 tttgcaggggcagattgaaaggattagtaacttcatggacgaaaattcaaatggtctata-tttgcagggacgaaaaacatatttaa 43867092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 384 - 525
Target Start/End: Original strand, 26739832 - 26739972
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| ||||| || ||||| || |||| ||||||| | | ||||||||| ||| |||||| |||||||||  |||||| | ||||||||||||||    
T  26739832 attacatctgattaggaacttcagggacgaaa-ttcaaatgacctatatttgcaaggatgaaagacctatttaagcaaaccacctcgcccaatcatcact 26739930  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    || |||| || |||||  | | |||| ||| |||||||||||    
T  26739931 tggcacatggacaccacatcgctaatgacagcccacctcagc 26739972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 562 - 631
Target Start/End: Original strand, 31690172 - 31690241
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaa 631  Q
    ||||||| ||||||||||  ||||||||| ||||||| ||  |||||||||||||||||| |||||||||    
T  31690172 caaaagttaaatgattaatatttgcagtggcagattggaatgattagtaacttcagggacgaaaattcaa 31690241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 25287917 - 25287980
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  25287917 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 25287980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 630
Target Start/End: Complemental strand, 29190268 - 29190200
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattca 630  Q
    ||||||||||||||||||  ||||||| || |||||| ||| |||||||||||||| ||| ||||||||    
T  29190268 caaaagtcaaatgattaatatttgcagggatagattggaaggattagtaacttcagagacgaaaattca 29190200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 31690020 - 31690083
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||||||| ||||||||||| ||||||||||    
T  31690020 attagtaacttcagggacgaaaattcaaatgacctatatttt-cagggacgaaaaacctatttaa 31690083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 41251189 - 41251125
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| |||||||| |||||||||| | | | |||||||||||||||||||| |||||||||    
T  41251189 attagtaacttcagagacgaaaattcaattgacctatatttgcagggacgaaagacctatttaag 41251125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 394 - 457
Target Start/End: Complemental strand, 7459 - 7396
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaa 457  Q
    |||||||| ||||| ||||||||||||||| | | ||||||||||||||||||||  |||||||    
T  7459 attagtaacttcagggaagaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 7396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 562 - 659
Target Start/End: Original strand, 20096297 - 20096397
Alignment:
Q  562 caaaagtcaaatgattaaat---tttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaag 657  Q
    ||||| ||||||||||||||   ||||||  | ||||||| ||| |||||||||||||||||| ||||||||||| |  |||| ||||||||||||||||    
T  20096297 caaaattcaaatgattaaatatatttgcatgggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctata-tttgcagggacgaaag 20096395  T
Q  658 ac 659  Q
    ||    
T  20096396 ac 20096397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 394 - 457
Target Start/End: Original strand, 29190477 - 29190540
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaa 457  Q
    |||||||| ||||||||  |||||||||||  || |||||||||||||||||||| ||||||||    
T  29190477 attagtaacttcagagataaaaattcaaatggtctatatttgcagggacgaaagacctatttaa 29190540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 562 - 633
Target Start/End: Original strand, 40525783 - 40525854
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat 633  Q
    ||||||||||||||||||  ||||||| | ||||||| ||  |||||||| ||||||||| |||||||||||    
T  40525783 caaaagtcaaatgattaatatttgcaggggcagattggaatgattagtaatttcagggacgaaaattcaaat 40525854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 669
Target Start/End: Complemental strand, 13566512 - 13566411
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatg-attatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||| || || | || ||| || | ||||||||| |||||||||||||||| | | || |||||||||||||||||||||||||    
T  13566512 tcaaatgattaatatttgcaatggcaaaatggaaggatcaataacttcagagacaaaaattcaaatgtactgta-tttgcagggacgaaagacctattta 13566414  T
Q  667 aac 669  Q
    |||    
T  13566413 aac 13566411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 672
Target Start/End: Complemental strand, 22763697 - 22763593
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagatt-gaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattt 665  Q
    ||||||||||||  |||| ||||  ||||| |||||| ||||||||||||||||| |||||||||||||  |||| |||||| |||||||| ||||||||    
T  22763697 tcaaatgattaatatttgtagtggtagattagaaaga-ttagtaacttcagggacgaaaattcaaatgacctata-tttgcaaggacgaaatacctattt 22763600  T
Q  666 aaacatt 672  Q
    || ||||    
T  22763599 aagcatt 22763593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 582 - 667
Target Start/End: Original strand, 24529952 - 24530037
Alignment:
Q  582 tttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||| ||||| | ||| ||||||||||||||  || |||||||||||||  |||| |||||||| |||||||||||||||||    
T  24529952 tttgcagtggcagataggaaggattagtaacttcagtaacgaaaattcaaatgacctata-tttgcaggaacgaaagacctatttaa 24530037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 635
Target Start/End: Original strand, 28339287 - 28339352
Alignment:
Q  570 aaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    ||||||||||||||||||||||| | ||||||  |||||||| ||||||||| ||  |||||||||    
T  28339287 aaatgattaaattttgcagtgactgtttgaaatgattagtaaattcagggaccaagtttcaaatga 28339352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 11478270 - 11478333
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||| ||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  11478270 attagtaacttcagcgacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 11478333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 15716194 - 15716257
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||| ||||||  |||| |||||| |||||||||||||||||||    
T  15716194 attagtaacttcagggacgaaaatttaaatgacatata-tttgcatggacgaaagacctatttaa 15716257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 29190418 - 29190355
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||| |||||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  29190418 attagtaactttagggacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 29190355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 37343041 - 37342978
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||  |||||||||||||  |||| |||||||||| |||||||||||||||    
T  37343041 attagtaacttcagggatgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 37342978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 40422226 - 40422162
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||| | |||||||| ||||||||| || | | |||||||||||||||||||| |||||||||    
T  40422226 attagttacttcagagacgaaaattcatatgacctatatttgcagggacgaaagacctatttaag 40422162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 40422419 - 40422357
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| ||||||||||| ||||||||||||||    
T  40422419 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggac-aaagacctatttaa 40422357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 40422478 - 40422542
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||    
T  40422478 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 40422542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 40525632 - 40525695
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| ||| |||||| |||||||||||||||    
T  40525632 attagtaacttcagggacgaaaattcaaatgacctata-tttacagggatgaaagacctatttaa 40525695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 361 - 457
Target Start/End: Original strand, 40933267 - 40933363
Alignment:
Q  361 taattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaa 457  Q
    |||| |||| ||||||||| || ||||||| | |||||||| |||||| |  ||||||||||| | | |||||| ||| ||||||||| ||||||||    
T  40933267 taatcatttgaaaaatgatcctaattacatttgattagtaatttcagaaacaaaaattcaaatgacctatatttacagagacgaaagacctatttaa 40933363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 621
Target Start/End: Complemental strand, 27856850 - 27856791
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggac 621  Q
    ||||||||||||||||||  ||||||| | | ||||| ||| ||||||||||||||||||    
T  27856850 caaaagtcaaatgattaatatttgcaggggcggattggaaggattagtaacttcagggac 27856791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 453
Target Start/End: Complemental strand, 38619864 - 38619805
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctat 453  Q
    |||||||| ||||| || |||||||||||| ||| ||||||||||| |||||||| ||||    
T  38619864 attagtaacttcagggacgaaaattcaaatgatctatatttgcaggaacgaaagacctat 38619805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 667
Target Start/End: Original strand, 41251249 - 41251311
Alignment:
Q  605 ttagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||| |||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  41251249 ttagtaacttcatggacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 41251311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 604 - 669
Target Start/End: Complemental strand, 15716135 - 15716070
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaaac 669  Q
    |||||||||||||| ||| |||||||||||||  |||| ||||||||||  ||||||||||||||||    
T  15716135 attagtaacttcagagacgaaaattcaaatgacctata-tttgcagggataaaagacctatttaaac 15716070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 355 - 525
Target Start/End: Original strand, 24529764 - 24529932
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | ||| |||  ||| |||||||| ||| | || |||||||||||| |   |||||||||  ||| ||||| |||||    
T  24529764 aaatattaatcatttgaaaaatggt-ctggttatgtctgattagtaacttctg-gacgaaaattcaaatgacttatatttgcaaagacaaaagacctatt 24529861  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    |||| |||| ||    |||||||||||||||||||| |||||||| ||   |||| ||| |||||||||||    
T  24529862 taagccaactaccacacccaatcatcacttgccacatgggcaccacgtcactaatgacagcccacctcagc 24529932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 604 - 665
Target Start/End: Complemental strand, 36623612 - 36623551
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattt 665  Q
    |||||||||||||||||  |||||||||||||  |||| |||||||||| |||||||||||||    
T  36623612 attagtaacttcagggatgaaaattcaaatgacctata-tttgcagggatgaaagacctattt 36623551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 394 - 460
Target Start/End: Original strand, 37343100 - 37343166
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtc 460  Q
    |||||||| ||||| || |||||||||||| | | |||||||||||| |||||||  ||||||||||    
T  37343100 attagtaatttcagggacgaaaattcaaatgacctatatttgcaggggcgaaagacatatttaagtc 37343166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 7e-33; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 355 - 499
Target Start/End: Original strand, 33989100 - 33989243
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    ||||||||||||||| ||||||| | || ||||||||| |||||||| ||||| || |||||||||||| | | |||||||||||||||||| | |||||    
T  33989100 aaatattaattatttgaaaaatggtcctaattacatctgattagtaacttcag-gacgaaaattcaaatgacctatatttgcagggacgaaaaacctatt 33989198  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    |||| ||||||| | ||||||||||||||||||||| ||||||||    
T  33989199 taagccaaccacttcgcccaatcatcacttgccacatgggcacca 33989243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 355 - 667
Target Start/End: Original strand, 33458002 - 33458299
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| |||| ||||||||| |||||||| || ||||| |||||||||||| | | ||||||| |||||||||||| |||||    
T  33458002 aaatattaatcatttgaaaaatggttctaattacatctgattagtaactttagagacgaaaattcaaatgacctatatttgtagggacgaaagacctatt 33458101  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc--nnnnnnncctaattatgatcaaaagtc 552  Q
    |||  ||||||| | || |||||||||||||| | | ||||||||||| | |||| ||| |||||||||||         |||||||| || ||||||||    
T  33458102 taacccaaccacctcgctcaatcatcacttgcaatatgggcaccatgtcgctaatgacagcccacctcagcaaaaaaaaacctaattaggaccaaaagtc 33458201  T
Q  553 aaatgatatcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcaggga 651  Q
                     ||||||||||  ||||||||||||||||  ||| |||||||||||||||||| | |||||||||||  |||| ||||||||||    
T  33458202 -----------------aaatgattaatatttgcagtgacagattagaaggattagtaacttcagggacgacaattcaaatgacctata-tttgcaggga 33458283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 354 - 499
Target Start/End: Original strand, 24576375 - 24576520
Alignment:
Q  354 aaaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctat 453  Q
    |||| |||||| |||| ||||||||| || ||||||||| ||| |||| ||||| || |||||||||||| | | |||||||||||||||||| |  |||    
T  24576375 aaaaaattaatcatttgaaaaatgatcctaattacatctgatttgtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaaaacttat 24576474  T
Q  454 ttaagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  24576475 ttaagccaaccactttgcccaatcatcacttgccacatgggcacca 24576520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 355 - 524
Target Start/End: Original strand, 30890293 - 30890462
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||||| ||||| || |||||||||||| |   |||||||| ||||||||| |||||||    
T  30890293 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacttatatttgctgggacgaaatatctatt 30890392  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcag 524  Q
    |||||||||||| | ||||||||||  ||||||||| |||||||| |  | |||| ||| ||||||||||    
T  30890393 taagtcaaccacctcgcccaatcatatcttgccacatgggcaccacgccgctaatgacagcccacctcag 30890462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 355 - 524
Target Start/End: Complemental strand, 46670553 - 46670385
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||||||||||| |  | ||||||||| |||||||| ||||| || |||||||||||| |   ||||||| ||||||||||||||||||    
T  46670553 aaatattaatcatttaaaaaatggtcataattacatctgattagtaacttcagggatgaaaattcaaatgacatatatttg-agggacgaaagatctatt 46670455  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcag 524  Q
    |||  ||||||| ||||||||||||||||||| ||| | ||||||  | | |||| ||||||||||||||    
T  46670454 taaaccaaccaccttgcccaatcatcacttgctacatgagcaccacatcgctaatgacaacccacctcag 46670385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 355 - 522
Target Start/End: Original strand, 30803932 - 30804100
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| | || ||||||| | || ||||||||| |||||||| ||| | || |||||||||||| | | |||||||||||||||||| | |||||    
T  30803932 aaatattaatcaattgaaaaatggtcctaattacatctgattagtaacttccgggacgaaaattcaaatgacctatatttgcagggacgaaaaacctatt 30804031  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacac-gggcaccatgttgataataacaacccacctc 522  Q
    |||| ||||||| | | |||||||||||||||||||| |||||||| || | |||| ||| ||||||||    
T  30804032 taagccaaccacctcgtccaatcatcacttgccacactgggcaccacgtcgctaatgacagcccacctc 30804100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 384 - 499
Target Start/End: Complemental strand, 21300402 - 21300287
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||||| | ||||||||||||    
T  21300402 attacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacatcgtccaatcatcact 21300303  T
Q  484 tgccacacgggcacca 499  Q
    ||||||| ||||||||    
T  21300302 tgccacatgggcacca 21300287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 53037142 - 53037317
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||| ||| |||||| |||||||||  |||||| | ||||||| ||||||    
T  53037142 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggatgaaagacctatttaagcaaaccacttcgcccaattatcact 53037241  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| |||| ||||  || ||||||| |||       |||||||| || |||||||||||||||    
T  53037242 tgccacatgggcaccacgttgctaatggcagcccaccttagcaaaaaaacctaattaggaccaaaagtcaaatgat 53037317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 563 - 669
Target Start/End: Original strand, 30890484 - 30890590
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacct 661  Q
    |||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||  |||||||||||||  |||| ||| |||  |||||||||||    
T  30890484 aaaagtcaaatgattaaattttgcagtggcagattgaaaagattagtaacttcagggatgaaaattcaaatgacctata-tttacagaaacgaaagacct 30890582  T
Q  662 atttaaac 669  Q
    ||||||||    
T  30890583 atttaaac 30890590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 562 - 669
Target Start/End: Original strand, 21300409 - 21300516
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||| ||| |||||| |||||| |||||||||||||| ||| ||||||||||| |  |||| |||||||||||||||||||    
T  21300409 caaaagtcaaatgattaatatttacagggacagactgaaaggattagtaacttcagagacgaaaattcaaataacatata-tttgcagggacgaaagacc 21300507  T
Q  661 tatttaaac 669  Q
    |||||||||    
T  21300508 tatttaaac 21300516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 384 - 499
Target Start/End: Original strand, 35432466 - 35432581
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||  |  ||||||||||||  || |||||||||||||||||||| ||||||||| ||||||| | |||| |||||||||    
T  35432466 attacatctgattagtaacttcatgggcgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagccaaccacttcgcccgatcatcact 35432565  T
Q  484 tgccacacgggcacca 499  Q
    ||||||  ||||||||    
T  35432566 tgccacttgggcacca 35432581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 1741495 - 1741390
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||  | ||||||| ||| |||||||||||||||||| |||||||||||||  |||| ||||||||||||||||||     
T  1741495 caaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacgaaagaca 1741397  T
Q  661 tatttaa 667  Q
    |||||||    
T  1741396 tatttaa 1741390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 10749426 - 10749321
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| || |||||  ||| |||||||||||||||||| |||||||||||||  |||| ||| |||||||||||||||    
T  10749426 caaaagtcaaatgattaatatttgcagggatagattagaaggattagtaacttcagggacgaaaattcaaatgacctata-tttacagggacgaaagacc 10749328  T
Q  661 tatttaa 667  Q
    |||||||    
T  10749327 tatttaa 10749321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 11313004 - 11312829
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||| ||| ||||||  ||||||||  |||||| | ||||||||||||||    
T  11313004 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggatgaaagacttatttaagcaaaccacctcgcccaatcatcact 11312905  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| | |||||| ||   |||| ||| |||||||||||        ||||||| || |||||||||||||||    
T  11312904 tgccacatgagcaccacgtcactaatgacatcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgat 11312829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 636
Target Start/End: Original strand, 30804124 - 30804198
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat 636  Q
    ||||||||||||||||||  ||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||    
T  30804124 caaaagtcaaatgattaatatttgcagtgacagattggaaggattagtaacttcaggaacgaaaattcaaatgat 30804198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 40256989 - 40257163
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| ||||| || |||||  | |||||||||||| | | ||||||||||||| |||||| ||||||||   |||||| | ||||||||||||||    
T  40256989 attacatctgattagcaacttcaggaacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaaacaaaccacctcgcccaatcatcact 40257088  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| || |  ||| ||| ||||||||| |       |||||||| ||||||||||||||||||    
T  40257089 tgccacatgggcaccacgtcg-caatgacagcccacctcaacaaaaatacctaattaggatcaaaagtcaaatgat 40257163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 384 - 525
Target Start/End: Original strand, 10749433 - 10749574
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || ||||||| |||| | | ||||||||||||| |||||| ||||| |||  |||||| | || |||||||||||    
T  10749433 attacatctgattagtaacttcagggacgaaaatttaaatgacctatatttgcagggatgaaagacctattaaagcaaaccacctcgctcaatcatcact 10749532  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||||| || ||| | || | |||| |||||||||||||||    
T  10749533 tgccacatggacactacgtcgctaatgacaacccacctcagc 10749574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 562 - 674
Target Start/End: Original strand, 10998149 - 10998261
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||| |||||||||||||  |||| ||||||| ||||||| ||     
T  10998149 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcagagacgaaaaaca 10998247  T
Q  661 tatttaaacatttt 674  Q
    ||||||| ||||||    
T  10998248 tatttaagcatttt 10998261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 384 - 525
Target Start/End: Original strand, 22129121 - 22129262
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | |||||| |||||| ||||||  ||||||||  |||||| | ||| ||| ||||||    
T  22129121 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaagacttatttaagcaaaccacctcgcctaattatcact 22129220  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||||| ||||||||||| | |||| |||  ||||||||||    
T  22129221 tgccacatgggcaccatgtcgctaatgacagtccacctcagc 22129262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 384 - 525
Target Start/End: Original strand, 55036784 - 55036925
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    |||| |||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||  || ||| | |  |||||||||||    
T  55036784 attatatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaatcacctcgttcaatcatcact 55036883  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||||| |||||||| || | |||| |||||| ||||||||    
T  55036884 tgccacatgggcaccacgtcgctaatgacaaccgacctcagc 55036925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 568 - 667
Target Start/End: Complemental strand, 30803948 - 30803849
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    |||| |||||||  ||||||||||||||||| |||||||||||||||||| ||| |||||||||||||  ||||  ||| ||||||||||||||||||||    
T  30803948 tcaattgattaatatttgcagtgacagattggaagaattagtaacttcagagacgaaaattcaaatgacctata-gttgaagggacgaaagacctattta 30803850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 384 - 499
Target Start/End: Complemental strand, 51279499 - 51279385
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||| | |||||  |||||||||  |||||| | ||||||||||||||    
T  51279499 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagg-atgaaagtcctatttaagcaaaccacctcgcccaatcatcact 51279401  T
Q  484 tgccacacgggcacca 499  Q
    ||||||| ||||||||    
T  51279400 tgccacatgggcacca 51279385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 10997989 - 10998163
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||  || |||||||||||| |   ||||||||||||| ||||| ||||||||||  |||||| | ||  ||||||||||    
T  10997989 attacatctgattagtaacttcatggacgaaaattcaaatgacatatatttgcagggatgaaag-tctatttaagcaaaccacctcgctgaatcatcact 10998087  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| || | |||| ||| |||||||||||         ||||||||| |||||||||||||||    
T  10998088 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatttaattatgaccaaaagtcaaatgat 10998163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 669
Target Start/End: Complemental strand, 33458018 - 33457917
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||||||||| ||| |||| |||||||||||||| | ||||||||||||||||  ||| ||| || ||||||||||||||||||    
T  33458018 tcaaatgattaatatttgcagtgacatattaaaaggattagtaacttcagaggcaaaaattcaaatgatccata-tttacatggacgaaagacctattta 33457920  T
Q  667 aac 669  Q
    |||    
T  33457919 aac 33457917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 38642739 - 38642634
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||| |||||||||||||||||||||  | |||| ||| ||| ||||||||||||||| ||||| |||||| ||||| |||||| |||||||| |||    
T  38642739 caaaagtgaaatgattaaattttgcagtggtatattggaaggattggtaacttcagggacagaaatttaaatgacttata-tttgcatggacgaaatacc 38642641  T
Q  661 tatttaa 667  Q
    |||||||    
T  38642640 tatttaa 38642634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 46670356 - 46670251
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    |||||||||||||||||||||||||||||  |||||| ||| |||||||| |||| ||||  ||||||||||||  |||| ||||||||||| ||||||     
T  46670356 caaaagtcaaatgattaaattttgcagtggtagattggaaggattagtaaattcaaggacggaaattcaaatgacctata-tttgcagggacaaaagact 46670258  T
Q  661 tatttaa 667  Q
    |||||||    
T  46670257 tatttaa 46670251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 570 - 669
Target Start/End: Complemental strand, 55036769 - 55036670
Alignment:
Q  570 aaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaaa 668  Q
    ||||||||||  ||||||| | ||||||| ||| ||||||||||||||| |  |||||||||||||  |||| |||||||||||||||||||||||||||    
T  55036769 aaatgattaatatttgcaggggcagattggaaggattagtaacttcaggaatgaaaattcaaatgacctata-tttgcagggacgaaagacctatttaaa 55036671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 562 - 669
Target Start/End: Original strand, 55036945 - 55037052
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||| ||||||||||||  ||||||| | ||||||| ||| ||||||||||||| | || |||||||||||||  |||| ||||||||||||||||||     
T  55036945 caaaaatcaaatgattaatatttgcaggggcagattggaaggattagtaacttcaagaacgaaaattcaaatgacctata-tttgcagggacgaaagaca 55037043  T
Q  661 tatttaaac 669  Q
    |||||||||    
T  55037044 tatttaaac 55037052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 562 - 676
Target Start/End: Complemental strand, 11312843 - 11312729
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | |||| || ||| ||| |||||||||||||| |||||||||||||  ||||||| | |||||||||||||     
T  11312843 caaaagtcaaatgattaatatttgcaggggcagactgcaaggattggtaacttcagggacgaaaattcaaatgacctatatttag-agggacgaaagaca 11312745  T
Q  661 tatttaaacatttttt 676  Q
    ||||||| | ||||||    
T  11312744 tatttaagcctttttt 11312729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 28310456 - 28310352
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgattatattttgcagggacgaaagacct 661  Q
    |||||||||||||||||||||||||||||  | | || ||| ||||||||||| ||||||  ||||||||||||   || ||||| ||| ||||||||||    
T  28310456 caaaagtcaaatgattaaattttgcagtggaaaactggaaggattagtaactttagggacggaaattcaaatgacctta-tttgcgggggcgaaagacct 28310358  T
Q  662 atttaa 667  Q
    ||||||    
T  28310357 atttaa 28310352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 560 - 633
Target Start/End: Original strand, 40257147 - 40257220
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat 633  Q
    ||||||||||||||||||||  ||||||| | ||||||||||  |||||||| ||||||||| |||||||||||    
T  40257147 atcaaaagtcaaatgattaatatttgcaggggcagattgaaatgattagtaatttcagggacgaaaattcaaat 40257220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 563 - 667
Target Start/End: Complemental strand, 51279338 - 51279234
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacct 661  Q
    |||||||||||||||||  ||||||| | || |||||||  |||||||||||| ||||| ||||||||||| |  |||| |||||||||||||||||| |    
T  51279338 aaaagtcaaatgattaatatttgcaggggcaaattgaaatgattagtaacttctgggacgaaaattcaaataacctata-tttgcagggacgaaagacat 51279240  T
Q  662 atttaa 667  Q
    ||||||    
T  51279239 atttaa 51279234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 779 - 835
Target Start/End: Complemental strand, 16003984 - 16003928
Alignment:
Q  779 cctctgaatgctaagtaaattatttcaccacacggaagctaatctccctccattgcc 835  Q
    ||||||||||||||||||||||||  |||||||||| |||||| |||||||||||||    
T  16003984 cctctgaatgctaagtaaattattctaccacacggatgctaatgtccctccattgcc 16003928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 562 - 665
Target Start/End: Complemental strand, 40256982 - 40256879
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||  | || |||| ||| |||||||||||||||||| ||||||||||| |  |||| |||||| ||||||||||||    
T  40256982 caaaagtcaaatgattaatatttgcaagggcatattggaaggattagtaacttcagggacgaaaattcaaataacctata-tttgcatggacgaaagacc 40256884  T
Q  661 tattt 665  Q
    |||||    
T  40256883 tattt 40256879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 562 - 664
Target Start/End: Original strand, 10749672 - 10749774
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||| | | ||||||| ||  |||||||||||||||||| |||||| ||||||  |||| ||||||||||||||||||     
T  10749672 caaaagtcaaatgattaatatttgctgaggcagattggaaagattagtaacttcagggacgaaaatttaaatgacctata-tttgcagggacgaaagaca 10749770  T
Q  661 tatt 664  Q
    ||||    
T  10749771 tatt 10749774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 355 - 559
Target Start/End: Complemental strand, 28310646 - 28310442
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||| |  |||| ||  |||||||||||  || ||||||||| || |  |||| |||||    
T  28310646 aaatattaatcatttgaaaaatggtcctaattacatctgattagttacgtcagggacaaaaattcaaatggtctatatttgcaaggtcacaagacctatt 28310547  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaa 554  Q
    |||| | ||||| |  | |||||||||||||||||| ||| |||| || | |||| ||| |||||||||||       ||||||||  | ||||||||||    
T  28310546 taagcccaccacctcactcaatcatcacttgccacatgggaaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattagaaccaaaagtcaa 28310447  T
Q  555 atgat 559  Q
    |||||    
T  28310446 atgat 28310442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 1741656 - 1741481
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| | ||| || ||||||| || | | | |||||| |||||| |||||| |||||||||  || | |   | ||||||||||||    
T  1741656 attacatctgattagtaactccagggacgaaaatttaattgacctatattttcagggatgaaagacctatttaagcaaatcgccacgtccaatcatcact 1741557  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| || | |||| ||| |||||||||||       |||||||| || |||||||||||||||    
T  1741556 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgat 1741481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 55036794 - 55036857
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  55036794 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 55036857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 394 - 457
Target Start/End: Original strand, 21300451 - 21300514
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaa 457  Q
    |||||||| |||||||| |||||||||||| |   |||||||||||||||||||| ||||||||    
T  21300451 attagtaacttcagagacgaaaattcaaataacatatatttgcagggacgaaagacctatttaa 21300514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 581 - 667
Target Start/End: Complemental strand, 24576377 - 24576291
Alignment:
Q  581 ttttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||  ||||||  ||| |||||||| |||| |||| ||||||||||||  |||||||| |||||||||||||||||||||||    
T  24576377 ttttgcagttgcagattagaaggattagtaatttcatggacgaaaattcaaatggcttatattt-gcagggacgaaagacctatttaa 24576291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 356 - 525
Target Start/End: Complemental strand, 30654777 - 30654612
Alignment:
Q  356 aatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctattt 455  Q
    ||||||||| |||| ||||||| |||| |||||||   |||||||| ||||  || |||||| ||||| |   ||||||||| | |||||||| ||||||    
T  30654777 aatattaatcatttgaaaaatggttctaattacat---attagtaacttcatggacgaaaatgcaaatgacatatatttgcaagaacgaaagacctattt 30654681  T
Q  456 aagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    |||  |||||||| |   ||||||||||||||| | | |||||| |||| |||| ||||| |||||||||    
T  30654680 aagataaccacatcgtt-aatcatcacttgccatatgagcaccacgttgctaatgacaactcacctcagc 30654612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 633
Target Start/End: Complemental strand, 22129113 - 22129043
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat 633  Q
    |||||||||||||||||  ||||||| | || |||| ||| |||||||||||||| ||| |||||||||||    
T  22129113 aaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagtgacgaaaattcaaat 22129043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 460
Target Start/End: Complemental strand, 30803912 - 30803846
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtc 460  Q
    |||||||| |||||||| |||||||||||| | | ||| ||| |||||||||||| |||||||||||    
T  30803912 attagtaacttcagagacgaaaattcaaatgacctatagttgaagggacgaaagacctatttaagtc 30803846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 562 - 636
Target Start/End: Original strand, 33989295 - 33989369
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat 636  Q
    ||||||||||||||||||  | || ||||||| |||| ||| |||| |||||||| |||| ||||||||||||||    
T  33989295 caaaagtcaaatgattaatatctgtagtgacaaattggaaggattactaacttcatggacgaaaattcaaatgat 33989369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 635
Target Start/End: Complemental strand, 10997984 - 10997912
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    ||||||||||||||||||||  ||| ||| ||   |||| ||| |||||||||||||||||| |||||||||||||    
T  10997984 atcaaaagtcaaatgattaatatttacaggga---attggaaggattagtaacttcagggacgaaaattcaaatga 10997912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 355 - 448
Target Start/End: Complemental strand, 21255829 - 21255736
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaaga 448  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||||| |||||  | |||||||||||| |   ||||||||||||| ||||||    
T  21255829 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcaggaatgaaaattcaaatgacttatatttgcagggatgaaaga 21255736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 635
Target Start/End: Original strand, 22129285 - 22129358
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    |||||||||||| |||||  ||||||| | || |||  ||| |||||||||||||||||| |||||||||||||    
T  22129285 caaaagtcaaattattaatatttgcagaggcaaatttgaaggattagtaacttcagggacgaaaattcaaatga 22129358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 568 - 664
Target Start/End: Original strand, 30654762 - 30654857
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatt 664  Q
    |||||||||||| | |||||||| ||||||  ||| || ||||||||||  ||| |||||||||||||  ||||||| ||||||||||||||||||||    
T  30654762 tcaaatgattaa-tattgcagtggcagattagaaggatcagtaacttcatagacgaaaattcaaatgacctatattt-gcagggacgaaagacctatt 30654857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 635
Target Start/End: Original strand, 46670539 - 46670604
Alignment:
Q  570 aaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    ||||||||||  |||||| ||||| | || |||||||||||||||||||||  |||||||||||||    
T  46670539 aaatgattaatatttgcaatgacaaaatggaagaattagtaacttcagggatgaaaattcaaatga 46670604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 1741453 - 1741389
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | ||||||||||||||||||||  ||||||||    
T  1741453 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 1741389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 10749384 - 10749320
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | |||||| ||||||||||||| |||||||||    
T  10749384 attagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacctatttaag 10749320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 21300392 - 21300329
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||  |||||||||||||  |||| |||||||||| |||||||||||||||    
T  21300392 attagtaacttcagggatgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 21300329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 30803971 - 30804034
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||| ||||| |||||||||||||  |||| ||||||||||||||| ||||||||||    
T  30803971 attagtaacttccgggacgaaaattcaaatgacctata-tttgcagggacgaaaaacctatttaa 30804034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 30890332 - 30890395
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||| | ||||||||    
T  30890332 attagtaacttcagggacgaaaattcaaatgacttata-tttgctgggacgaaatatctatttaa 30890395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 33458236 - 33458300
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || || ||||||||| | | |||||||||||||||||||| |||||||||    
T  33458236 attagtaacttcagggacgacaattcaaatgacctatatttgcagggacgaaagacctatttaag 33458300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 35432476 - 35432539
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||| || | |||||||||||| | ||||||| |||||||||||||||||||||||    
T  35432476 attagtaacttcatgggcgaaaattcaaatggtctatattt-gcagggacgaaagacctatttaa 35432539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 560 - 667
Target Start/End: Complemental strand, 53037137 - 53037030
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    |||||| ||||||||| |||  ||||||| |  | |||| ||| |||||||||||||||||| |||||||||||||  |||| ||| |||||| ||||||    
T  53037137 atcaaatgtcaaatgactaatatttgcaggggtatattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttacagggatgaaaga 53037039  T
Q  659 cctatttaa 667  Q
    | |||||||    
T  53037038 cttatttaa 53037030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 53037152 - 53037215
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||||| ||| |||||||||||||||    
T  53037152 attagtaacttcagggacgaaaattcaaatgacctata-tttgcaaggatgaaagacctatttaa 53037215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 499
Target Start/End: Complemental strand, 38642870 - 38642784
Alignment:
Q  412 gaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    ||||||||||||  || ||||||||||||| ||||   ||||||||  ||||||| | ||||| ||||||||||||||| ||||||||    
T  38642870 gaaaattcaaatagtctatatttgcagggatgaaacc-ctatttaaaccaaccacctcgcccactcatcacttgccacatgggcacca 38642784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 670
Target Start/End: Original strand, 40256999 - 40257065
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaaaca 670  Q
    ||||| ||||||||| || |||||||||||||  ||||||| ||||||| ||||||||||||||||||    
T  40256999 attagcaacttcaggaacgaaaattcaaatgacctatattt-gcagggatgaaagacctatttaaaca 40257065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 457
Target Start/End: Complemental strand, 55036735 - 55036672
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaa 457  Q
    |||||||| |||||  | |||||||||||| | | |||||||||||||||||||| ||||||||    
T  55036735 attagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 55036672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 30654592 - 30654487
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    |||||||||||| |||||  ||| ||||  ||||||| ||  ||||||||||||| |||| ||| |||||| || ||||| |||||||||| |||||||     
T  30654592 caaaagtcaaattattaatatttacagtagcagattggaaatattagtaacttcaaggacgaaatttcaaacgacttata-tttgcagggatgaaagact 30654494  T
Q  661 tatttaa 667  Q
    |||||||    
T  30654493 tatttaa 30654487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 412 - 458
Target Start/End: Complemental strand, 35432454 - 35432408
Alignment:
Q  412 gaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    ||||||||||||  || |||||||||||||||||||| |||||||||    
T  35432454 gaaaattcaaatggtctatatttgcagggacgaaagacctatttaag 35432408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 394 - 460
Target Start/End: Complemental strand, 40256940 - 40256874
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtc 460  Q
    |||||||| ||||| || |||||||||||| | | ||||||||| |||||||||| |||||| ||||    
T  40256940 attagtaacttcagggacgaaaattcaaataacctatatttgcatggacgaaagacctatttgagtc 40256874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 667
Target Start/End: Complemental strand, 49724 - 49652
Alignment:
Q  595 attgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacctatttaa 667  Q
    |||| |||||||||||| ||||||||| ||| ||||||| | ||||| ||||||||||| ||| ||||||||||    
T  49724 attggaagaattagtaatttcagggacgaaatttcaaatagcttata-tttgcagggacaaaatacctatttaa 49652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 664
Target Start/End: Original strand, 10749443 - 10749503
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatt 664  Q
    |||||||||||||||||| |||||| ||||||  |||| |||||||||| ||||||||||||    
T  10749443 attagtaacttcagggacgaaaatttaaatgacctata-tttgcagggatgaaagacctatt 10749503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 30654800 - 30654857
Alignment:
Q  397 agtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    ||||| |||| ||| |||||||||||| | | |||||||||||||||||||| |||||    
T  30654800 agtaacttcatagacgaaaattcaaatgacctatatttgcagggacgaaagacctatt 30654857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 615 - 667
Target Start/End: Complemental strand, 35432461 - 35432409
Alignment:
Q  615 cagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    ||||||| |||||||||||| | ||||||| |||||||||||||||||||||||    
T  35432461 cagggacgaaaattcaaatggtctatattt-gcagggacgaaagacctatttaa 35432409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 669
Target Start/End: Complemental strand, 46670514 - 46670450
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgattatattttgcagggacgaaagacctatttaaac 669  Q
    |||||||||||||||||  |||||||||||||  |||| ||  |||||||||||| ||||||||||    
T  46670514 attagtaacttcagggatgaaaattcaaatga-catatatttgagggacgaaagatctatttaaac 46670450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 4e-31; HSPs: 70)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 384 - 525
Target Start/End: Original strand, 26542732 - 26542873
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| ||| ||||||||||  |||||||| ||||||||| |||| || ||||||||||||||||    
T  26542732 attacatctgattagtaacttcagggacgaaaattcaaatgatctatatttgcagatacgaaagacctatttaagccaacaactttgcccaatcatcact 26542831  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||||| |||||||| || | |||| ||| |||||||||||    
T  26542832 tgccacatgggcaccacgtcgctaatgacagcccacctcagc 26542873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 5064604 - 5064429
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| ||| ||||||||||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  5064604 attacatctaattagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagacctatttaaggaaaccacctcgcccaatcatcact 5064505  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| || | |||| |||  ||||||||||        ||||||| || |||||||||||||||    
T  5064504 tgccacatgggcaccacgtcgctaatgacagtccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgat 5064429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 20774357 - 20774462
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||| |||||||  |||| ||||||| |||||||||||    
T  20774357 caaaagtcaaatgattaaattttgcagtggcagattgaaagaattagtaacttcagagacgaaaatacaaatgacctata-tttgcagagacgaaagacc 20774455  T
Q  661 tatttaa 667  Q
    |||||||    
T  20774456 tatttaa 20774462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 384 - 525
Target Start/End: Original strand, 32337679 - 32337820
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| |||||||| |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||| | | ||||||||||||    
T  32337679 attacatctgattagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgtccaatcatcact 32337778  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||||| ||||||||  ||| |||| ||| |||||||||||    
T  32337779 tgccacatgggcaccacattgctaatgacagcccacctcagc 32337820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 355 - 525
Target Start/End: Original strand, 7612634 - 7612803
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||||| | ||| || |||||||||||| |   |||||||||||||||||||| |||||    
T  7612634 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaattccagggacgaaaattcaaatgacttatatttgcagggacgaaagacctatt 7612733  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||  |||||| | ||||||||||||||||||||| || ||||| || | |||| ||| |||||||||||    
T  7612734 taag-aaaccacctcgcccaatcatcacttgccacatggacaccacgtcgctaatgacagcccacctcagc 7612803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 355 - 499
Target Start/End: Complemental strand, 3586509 - 3586365
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||||||||||| |  | ||||||||| |||||||| || || || |||||||||||| | | ||||||| |||||||||||| |||||    
T  3586509 aaatattaatcatttaaaaaatggtcataattacatctgattagtaactttagggacgaaaattcaaatgacctatatttgtagggacgaaagacctatt 3586410  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    |||| ||||||| | ||| ||||||||||| ||||| ||||||||    
T  3586409 taagccaaccacctcgcctaatcatcacttaccacatgggcacca 3586365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 355 - 522
Target Start/End: Complemental strand, 3299857 - 3299690
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| |||| ||||||||| |||||||| ||||  || |||||||||||| | | || ||||||||||||||| | ||||     
T  3299857 aaatattaatcatttgaaaaatggttctaattacatctgattagtaacttcatggatgaaaattcaaatgacctatgtttgcagggacgaaatacctatc 3299758  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctc 522  Q
    |||| ||| ||| | | |||||||||||||| |||| |||||||| |||| |||| ||| ||||||||    
T  3299757 taagccaatcacctcgtccaatcatcacttgtcacatgggcaccacgttgctaatgacagcccacctc 3299690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 13480323 - 13480498
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||| | |||||||||  ||||||   ||||||||||||||    
T  13480323 attacatctaattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaaaacctatttaagcaaaccaccaagcccaatcatcact 13480422  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| |||||||| || | |||| ||| |||||||||||        ||||||| || |||||||||||||||    
T  13480423 tgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgat 13480498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 559
Target Start/End: Original strand, 22493995 - 22494170
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||| | |||||||| ||||| || |||||||||||| | | ||||||||||||| ||||||  ||||||||| |||||| | |  |||||||||||    
T  22493995 attacatttgattagtaacttcagggacgaaaattcaaataacctatatttgcagggatgaaagacttatttaagtaaaccacctcgttcaatcatcact 22494094  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||| ||||||||||||| |||| |||  ||||||||||       || ||||| || |||||||||||||||    
T  22494095 tgccacatgggcaccatgttgctaatgacagtccacctcagcaaaaaaacccaattaggaccaaaagtcaaatgat 22494170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 568 - 667
Target Start/End: Complemental strand, 7612650 - 7612551
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||| ||||| | ||||||||||||||||||||||||| |||||||||||| | |||| |||||||||||||||||||||||||    
T  7612650 tcaaatgattaatatttgcaatgacaaaatgaaagaattagtaacttcagggacgaaaattcaaatggtctata-tttgcagggacgaaagacctattta 7612552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 562 - 669
Target Start/End: Complemental strand, 32337672 - 32337565
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||| ||| |||||||||||||||||| |||||||||||| | |||| |||||||||||||||||||    
T  32337672 caaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctata-tttgcagggacgaaagacc 32337574  T
Q  661 tatttaaac 669  Q
    |||||||||    
T  32337573 tatttaaac 32337565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 384 - 667
Target Start/End: Complemental strand, 21880633 - 21880367
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||| ||||| |||||| || ||||||  ||||||   ||||||||||||||    
T  21880633 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctgtttaagcaaaccaccacgcccaatcatcact 21880534  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgatatcaaaagtcaaatgattaaattt 583  Q
    ||||||| |||||||| || | |||| ||| |||||||||||       ||||||||                  || ||||||||||||||||||  ||    
T  21880533 tgccacatgggcaccacgtcggtaatgacagcccacctcagcaaaaaaacctaatta-----------------gtaccaaaagtcaaatgattaatatt 21880451  T
Q  584 tgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||| | ||||||||||| |||||||||||||| ||| ||||||||||||| ||||| ||| |||| ||||||||| |||||||    
T  21880450 tgcaggggcagattgaaaggattagtaacttcagagacgaaaattcaaatgacttata-tttacaggaacgaaagacatatttaa 21880367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 384 - 667
Target Start/End: Original strand, 23291859 - 23292125
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||| |  | |||||||||||    
T  23291859 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctctctcaatcatcact 23291958  T
Q  484 tgccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgatatcaaaagtcaaatgattaaattt 583  Q
    ||||||| |||||||| || | |||| ||| | ||| |||||       |||||||| |||||                 ||||||||||||||||  ||    
T  23291959 tgccacatgggcaccacgtcgctaatgacagctcacttcagcaaaaaaacctaattaggatca-----------------aaagtcaaatgattaatatt 23292041  T
Q  584 tgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||| || |||||| ||| |||||||||||||||||| |||||||||||||  |||| |||||| ||||||||||| |||||||    
T  23292042 tgcagggatagattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcatggacgaaagacatatttaa 23292125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 355 - 525
Target Start/End: Original strand, 31879543 - 31879713
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| || | ||| ||||| || |||||||||||| | | |||||| ||  ||||||||| |||||    
T  31879543 aaatattaataatttgaaaaatggtcctaattacatctgataattaacttcagggacgaaaattcaaatgacctatatttccaaagacgaaagacctatt 31879642  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    |||| ||||||| | |||||||||||||||| |||| |||||||| |  | |||| ||| |||||||||||    
T  31879643 taagccaaccacctcgcccaatcatcacttggcacatgggcaccacgccgctaatgacagcccacctcagc 31879713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 412 - 525
Target Start/End: Complemental strand, 1066380 - 1066267
Alignment:
Q  412 gaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataa 511  Q
    |||||||||||| | | ||||||||| |||||||| | || |||||| ||||||| | ||||||||||||||||||||| ||||||||||| | |||| |    
T  1066380 gaaaattcaaatgacctatatttgcaaggacgaaaaacctttttaagccaaccacctcgcccaatcatcacttgccacatgggcaccatgtcgctaatga 1066281  T
Q  512 caacccacctcagc 525  Q
    || |||||||||||    
T  1066280 cagcccacctcagc 1066267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 384 - 499
Target Start/End: Complemental strand, 20561196 - 20561081
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    ||||||||| |||||||| ||||  || |||||||||||| | | ||||||||||||| ||||||  ||||||||  |||||| | ||||||||||||||    
T  20561196 attacatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggatgaaagacatatttaagcaaaccacctcgcccaatcatcact 20561097  T
Q  484 tgccacacgggcacca 499  Q
    ||||||| ||||||||    
T  20561096 tgccacatgggcacca 20561081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 562 - 664
Target Start/End: Original strand, 31879734 - 31879836
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    |||||||||||||||||||||||||||| |||||||| ||  |||||||||||||||||   ||||||||||||  |||| |||| ||||||||||||||    
T  31879734 caaaagtcaaatgattaaattttgcagtaacagattggaattattagtaacttcagggatgcaaattcaaatgacctata-tttgtagggacgaaagacc 31879832  T
Q  661 tatt 664  Q
    ||||    
T  31879833 tatt 31879836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 7612825 - 7612930
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||||||||||||| ||||||| ||  ||| |||| ||||||||| ||||||||||| | ||||| ||| |||| ||||||||||    
T  7612825 caaaagtcaaatgattaaattttgcagtggcagattggaaagattggtaatttcagggacgaaaattcaaatagcttata-tttacaggcacgaaagacc 7612923  T
Q  661 tatttaa 667  Q
    |||||||    
T  7612924 tatttaa 7612930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 13480316 - 13480211
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||| ||||||||||| |  |||| ||||||||||||||||||     
T  13480316 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctata-tttgcagggacgaaagaca 13480218  T
Q  661 tatttaa 667  Q
    |||||||    
T  13480217 tatttaa 13480211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 20994967 - 20995072
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||  ||||||||||||| || || ||||||| |||||||||||    
T  20994967 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacttcta-tttgcagagacgaaagacc 20995065  T
Q  661 tatttaa 667  Q
    |||||||    
T  20995066 tatttaa 20995072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 26503630 - 26503735
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||||| | ||||| ||| |||| |||||||| |||| ||||||||||||| ||||| ||||||||||||||| |||    
T  26503630 caaaagtcaaatgattaatatttgcagtggcggattggaaggattaataacttcatggacgaaaattcaaatgacttata-tttgcagggacgaaaaacc 26503728  T
Q  661 tatttaa 667  Q
    |||||||    
T  26503729 tatttaa 26503735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 5064443 - 5064338
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || ||||  || |||||||||||||||||| ||||||||||||| ||||| ||| ||||||||||||||     
T  5064443 caaaagtcaaatgattaatatttgcaggggcaaattgggaggattagtaacttcagggacgaaaattcaaatgacttata-tttacagggacgaaagaca 5064345  T
Q  661 tatttaa 667  Q
    |||||||    
T  5064344 tatttaa 5064338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 20561036 - 20560931
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||||||  |||| ||||| ||||||| |||||||||||||  |||| ||||||||||||||||||     
T  20561036 caaaagtcaaatgattaatatttgcaggggcagattgaaatgattaataactacagggacgaaaattcaaatgacctata-tttgcagggacgaaagaca 20560938  T
Q  661 tatttaa 667  Q
    |||||||    
T  20560937 tatttaa 20560931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 392 - 458
Target Start/End: Complemental strand, 21544586 - 21544520
Alignment:
Q  392 ttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||||| |||||||| |||||||||||| | | ||||||||||||||||||||||||||||||    
T  21544586 ttattagtaacttcagagacgaaaattcaaatgacctatatttgcagggacgaaagatctatttaag 21544520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 21880640 - 21880745
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaa-tgattatattttgcagggacgaaagacc 660  Q
    ||||||||||||| ||||  ||||||| || |||||| ||| |||||||||||||||||| |||||||||| ||  |||| |||| ||||||||||||||    
T  21880640 caaaagtcaaatgcttaatatttgcagggatagattggaaggattagtaacttcagggacgaaaattcaaattgcatata-tttggagggacgaaagacc 21880738  T
Q  661 tatttaa 667  Q
    |||||||    
T  21880739 tatttaa 21880745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 667
Target Start/End: Complemental strand, 26542719 - 26542617
Alignment:
Q  568 tcaaatgattaaat-tttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattt-tgcagggacgaaagacctatt 664  Q
    |||||||||||||| ||||||||| ||||||||||  |||||||||||||||||| |||||||||||||  ||||||| |  |||||||||| |||||||    
T  26542719 tcaaatgattaaatatttgcagtggcagattgaaatgattagtaacttcagggacgaaaattcaaatgacatatatttgtaaagggacgaaaaacctatt 26542620  T
Q  665 taa 667  Q
    |||    
T  26542619 taa 26542617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 562 - 635
Target Start/End: Complemental strand, 1066246 - 1066173
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    ||||| |||||| |||||||||||||||||||||||||||| |||| |||||| | |||| |||||||||||||    
T  1066246 caaaattcaaattattaaattttgcagtgacagattgaaaggattaataactttaaggacgaaaattcaaatga 1066173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 667
Target Start/End: Complemental strand, 3299669 - 3299562
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    ||||||||| ||||||||||  |||||| || || |||| ||  ||||||||||||| |||| ||||||||||||| ||||| ||||||| |||||||||    
T  3299669 atcaaaagtgaaatgattaatatttgcaatggcaaattggaatgattagtaacttcatggacgaaaattcaaatgacttata-tttgcagagacgaaaga 3299571  T
Q  659 cctatttaa 667  Q
    |||||||||    
T  3299570 cctatttaa 3299562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 562 - 669
Target Start/End: Original strand, 5064611 - 5064718
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| ||||||||| |||||||| ||||||||||| |  |||| ||||||| ||||||||||     
T  5064611 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacctcagggacgaaaattcaaatggcctata-tttgcagagacgaaagaca 5064709  T
Q  661 tatttaaac 669  Q
    |||||||||    
T  5064710 tatttaaac 5064718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 667
Target Start/End: Original strand, 30234866 - 30234973
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||  ||||||||||  |  |||| |||||||||||||||||    
T  30234866 atcaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaacaacctata-tttgcagggacgaaaga 30234964  T
Q  659 cctatttaa 667  Q
    | |||||||    
T  30234965 catatttaa 30234973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 565 - 667
Target Start/End: Complemental strand, 3586316 - 3586215
Alignment:
Q  565 aagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctat 663  Q
    |||||||||||||||||||||||||| ||||||  ||| ||||| ||||| || ||| |||||||||||||  |||| |||||| |||||||||||||||    
T  3586316 aagtcaaatgattaaattttgcagtggcagatttgaaggattagcaactttagagacgaaaattcaaatgacctata-tttgca-ggacgaaagacctat 3586219  T
Q  664 ttaa 667  Q
    ||||    
T  3586218 ttaa 3586215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 562 - 676
Target Start/End: Original strand, 26542896 - 26543010
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||| ||| | ||||||||  |||||||||||||| ||| |||| ||||||||  |||| |||||||||||||||||||    
T  26542896 caaaagtcaaatgattaatatttgcggtggccgattgaaattattagtaacttcagagacgaaaactcaaatgacctata-tttgcagggacgaaagacc 26542994  T
Q  661 tatttaaacatttttt 676  Q
    || |||| | ||||||    
T  26542995 taattaagcttttttt 26543010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 355 - 466
Target Start/End: Original strand, 31386885 - 31386995
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||||| || |||||||||  ||||||| ||||| || |||||||||||| | | ||||||||| |||| ||||| |||||    
T  31386885 aaatattaatcatttgaaaaatgatcctaattacatctggttagtaacttcag-gatgaaaattcaaatgacctatatttgcaaggacaaaagacctatt 31386983  T
Q  455 taagtcaaccac 466  Q
    |||| |||||||    
T  31386984 taagccaaccac 31386995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 737973 - 738078
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||   ||| || | ||||||| ||| ||||||||||||| |||| |||||||||||||  |||| ||||||||||||||||||     
T  737973 caaaagtcaaatgattaatacttgaaggggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctata-tttgcagggacgaaagaca 738071  T
Q  661 tatttaa 667  Q
    |||||||    
T  738072 tatttaa 738078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 13480484 - 13480589
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  |||| || | ||||||| ||| |||||||||||||||||| |||||||||||||  |||| ||| || |||||||||||     
T  13480484 caaaagtcaaatgattaatatttgtaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttacaaggacgaaagaca 13480582  T
Q  661 tatttaa 667  Q
    |||||||    
T  13480583 tatttaa 13480589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 15819766 - 15819871
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    |||||||||||||||||   ||||||  |  |||||| ||| |||||||||||||||||| |||||||||||||  |||| ||||||||||||||||||     
T  15819766 caaaagtcaaatgattagtatttgcaagggtagattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggacgaaagaca 15819864  T
Q  661 tatttaa 667  Q
    |||||||    
T  15819865 tatttaa 15819871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 355 - 457
Target Start/End: Complemental strand, 19296525 - 19296423
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||||| ||||  || |||||||||||| | | |||||||||||||||| ||| |||||    
T  19296525 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcatggatgaaaattcaaatgacctatatttgcagggacgatagacctatt 19296426  T
Q  455 taa 457  Q
    |||    
T  19296425 taa 19296423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 568 - 669
Target Start/End: Original strand, 19296509 - 19296610
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||||||  ||||||  | |||||||||||||||| || |||||||||||||  |||| |||||| ||||||||||||||||||    
T  19296509 tcaaatgattaatatttgcagtggtagattggcaaaattagtaacttcaggaacgaaaattcaaatgacatata-tttgcaaggacgaaagacctattta 19296607  T
Q  667 aac 669  Q
    |||    
T  19296608 aac 19296610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 23291852 - 23291747
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||  ||||||||||| |  |||| |||| |||||||||||||     
T  23291852 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatggcctata-tttgtagggacgaaagaca 23291754  T
Q  661 tatttaa 667  Q
    |||||||    
T  23291753 tatttaa 23291747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 603 - 667
Target Start/End: Complemental strand, 5064595 - 5064531
Alignment:
Q  603 aattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||| |||||||||||||||    
T  5064595 aattagtaacttcagggacgaaaattcaaatgatctata-tttgcagggatgaaagacctatttaa 5064531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 604 - 669
Target Start/End: Complemental strand, 31879523 - 31879459
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgattatattttgcagggacgaaagacctatttaaac 669  Q
    |||||||||||| ||||| |||||||||||||  |||||| |||||||||||||||||||||||||    
T  31879523 attagtaacttcggggacgaaaattcaaatgaccatattt-gcagggacgaaagacctatttaaac 31879459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 568 - 667
Target Start/End: Original strand, 3299841 - 3299940
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||| || ||||||| ||| ||||||||||||| |||| |||||||||||||  |||| ||||||||||||||| || ||||||    
T  3299841 tcaaatgattaatatttgcaatggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctata-tttgcagggacgaaatacatattta 3299939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 355 - 479
Target Start/End: Original strand, 26503450 - 26503573
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||| ||| |||| ||||||| | || ||||||||| |||||||| ||||| || |||||||||||| | | |||||||||| ||| |||||  ||||    
T  26503450 aaatataaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagtgac-aaagacttatt 26503548  T
Q  455 taagtcaaccacattgcccaatcat 479  Q
    |||| ||||||| | ||||||||||    
T  26503549 taagccaaccacctcgcccaatcat 26503573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 562 - 669
Target Start/End: Original strand, 31393459 - 31393566
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||||||||| ||| || |||| ||||||||||||||||| | |  |||||| |||| |  |||  |||||||||||||||||||    
T  31393459 caaaagtcaaatgattaaattttgcggtggcatattggaagaattagtaacttcatgaatgaaaattgaaataagctat-gtttgcagggacgaaagacc 31393557  T
Q  661 tatttaaac 669  Q
    |||| ||||    
T  31393558 tattcaaac 31393566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 560 - 657
Target Start/End: Original strand, 9607590 - 9607687
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaag 657  Q
    ||||||||||||||||||||  ||||||| | || |||  ||| ||||||||||||| |||| |||||||||||||  |||| ||||||||||||||||    
T  9607590 atcaaaagtcaaatgattaatatttgcaggggcatattagaaggattagtaacttcatggacgaaaattcaaatgacctata-tttgcagggacgaaag 9607687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 587 - 667
Target Start/End: Original strand, 16704610 - 16704690
Alignment:
Q  587 agtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacctatttaa 667  Q
    |||| ||||||| ||| ||||||||||||| |||| ||||||||||| |  |||| ||||||||||||||||||||||||||    
T  16704610 agtggcagattggaaggattagtaacttcaaggacgaaaattcaaatggcctata-tttgcagggacgaaagacctatttaa 16704690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 562 - 635
Target Start/End: Complemental strand, 22493988 - 22493916
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    ||||||||||||||||||  ||||||| |  |||||||||  |||||||||||||||||| |||||||||||||    
T  22493988 caaaagtcaaatgattaatatttgcagggt-agattgaaaagattagtaacttcagggacgaaaattcaaatga 22493916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 562 - 635
Target Start/End: Original strand, 22494156 - 22494229
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    |||||||||||||||| |  ||||||| | ||||||| ||| ||||||||||||| |||| |||||||||||||    
T  22494156 caaaagtcaaatgattgatatttgcaggggcagattggaaggattagtaacttcaaggacgaaaattcaaatga 22494229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 563 - 667
Target Start/End: Original strand, 32337844 - 32337947
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacct 661  Q
    |||||||||||||||||  ||||||| | || |||| ||| || ||||||||||||||| |||||||||||||  |||| |||||| ||||||||||| |    
T  32337844 aaaagtcaaatgattaatatttgcaggggcatattggaaggatcagtaacttcagggacgaaaattcaaatgacctata-tttgca-ggacgaaagacat 32337941  T
Q  662 atttaa 667  Q
    ||||||    
T  32337942 atttaa 32337947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 7612614 - 7612550
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || ||||||||||||  || |||||||||||||||||||| |||||||||    
T  7612614 attagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaag 7612550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 7612673 - 7612736
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||| | ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  7612673 attagtaattccagggacgaaaattcaaatgacttatattt-gcagggacgaaagacctatttaa 7612736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 429 - 525
Target Start/End: Original strand, 15819649 - 15819745
Alignment:
Q  429 atatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    ||||||||||||| |||| | ||||||||| ||||||  |  |||||||||||||||||||| |||||| | || | |||| ||| |||||||||||    
T  15819649 atatttgcagggatgaaaaacctatttaagccaaccatctcacccaatcatcacttgccacatgggcactacgtcgctaatgacagcccacctcagc 15819745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 26542742 - 26542805
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||| |||| |||||||  |||||||||||||||||    
T  26542742 attagtaacttcagggacgaaaattcaaatgatctata-tttgcagatacgaaagacctatttaa 26542805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 780 - 835
Target Start/End: Complemental strand, 12249777 - 12249722
Alignment:
Q  780 ctctgaatgctaagtaaattatttcaccacacggaagctaatctccctccattgcc 835  Q
    ||||||| |||||| |||||||| |||||||| |||||||||||||| ||||||||    
T  12249777 ctctgaacgctaagcaaattattccaccacactgaagctaatctccccccattgcc 12249722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 394 - 457
Target Start/End: Complemental strand, 32337630 - 32337567
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaa 457  Q
    |||||||| ||||| || ||||||||||||  || |||||||||||||||||||| ||||||||    
T  32337630 attagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaa 32337567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 604 - 677
Target Start/End: Complemental strand, 19296486 - 19296413
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaaacatttttta 677  Q
    ||||||||||||| |||  |||||||||||||  ||||||| |||||||||| |||||||||||||| |||||||    
T  19296486 attagtaacttcatggatgaaaattcaaatgacctatattt-gcagggacgatagacctatttaaacctttttta 19296413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 355 - 485
Target Start/End: Original strand, 20774175 - 20774304
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| |||||||| ||||  || |||||||||||| |   ||||||| |||||  ||||| |||||    
T  20774175 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaatttcatggacgaaaattcaaatgacttatatttg-agggattaaagacctatt 20774273  T
Q  455 taagtcaaccacattgcccaatcatcacttg 485  Q
    |||  ||||||| | ||||||||| ||||||    
T  20774274 taaaccaaccacctcgcccaatcaccacttg 20774304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 20994926 - 20994822
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatg-attatattttgcagggacgaaagacc 660  Q
    ||||||| ||||||||||  ||||||| | ||||||  ||| |||||||||||||| ||| |||||||||||| | |||| ||| ||||||||||||||     
T  20994926 caaaagttaaatgattaatatttgcaggg-cagattagaaggattagtaacttcagagacgaaaattcaaatgaactata-tttacagggacgaaagaca 20994829  T
Q  661 tatttaa 667  Q
    |||||||    
T  20994828 tatttaa 20994822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 392 - 458
Target Start/End: Original strand, 26542936 - 26543002
Alignment:
Q  392 ttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||||| |||||||| ||||| |||||| | | |||||||||||||||||||| ||| |||||    
T  26542936 ttattagtaacttcagagacgaaaactcaaatgacctatatttgcagggacgaaagacctaattaag 26543002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 603 - 667
Target Start/End: Original strand, 13480332 - 13480396
Alignment:
Q  603 aattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||||||||| |||||||||||||  |||| |||||||||| |||| ||||||||||    
T  13480332 aattagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaaaacctatttaa 13480396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 635
Target Start/End: Original strand, 20561203 - 20561276
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga 635  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||| |||| ||| |||| |||||||||||||    
T  20561203 caaaagtcaaatgattaatatttgcaggggcagattggaaggattaataacatcaaggacgaaaattcaaatga 20561276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 568 - 668
Target Start/End: Complemental strand, 20774191 - 20774091
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||| ||||| | |||||| |||| |||||||| |||| |||||||||||||  |||| |||| | ||| ||||||||||||||    
T  20774191 tcaaatgattaatatttgcaatgacaaaatgaaaggattaataacttcaaggacgaaaattcaaatgacatata-tttgtaaggatgaaagacctattta 20774093  T
Q  667 aa 668  Q
    ||    
T  20774092 aa 20774091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 384 - 448
Target Start/End: Complemental strand, 737966 - 737902
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaaga 448  Q
    ||||||||| |||||||| |||||  | |||||||||||| | | ||||||||||||||||||||    
T  737966 attacatctgattagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaaga 737902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 3586470 - 3586407
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||| |||||| |||||||||||||  |||| |||| |||||||||||||||||||||    
T  3586470 attagtaactttagggacgaaaattcaaatgacctata-tttgtagggacgaaagacctatttaa 3586407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 15819808 - 15819872
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| | | ||||||||||||||||||||  ||||||||    
T  15819808 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 15819872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 19039107 - 19039171
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| |||| || | ||||||||||| | | |||||||||||||| |||||||||||||||    
T  19039107 attagtaacttcaaagtataaaattcaaataacctatatttgcagggactaaagatctatttaag 19039171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 20994885 - 20994821
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| |||||||| |||||||||||| | | |||||| |||||||||||||  ||||||||    
T  20994885 attagtaacttcagagacgaaaattcaaatgaactatatttacagggacgaaagacatatttaag 20994821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 21544584 - 21544521
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||| ||| |||||||||||||  |||| ||||||||||||||||| ||||||||    
T  21544584 attagtaacttcagagacgaaaattcaaatgacctata-tttgcagggacgaaagatctatttaa 21544521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 32337689 - 32337752
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||| ||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  32337689 attagtaacttcagagacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 32337752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 355
Target Start/End: Complemental strand, 13480578 - 13480549
Alignment:
Q  326 tttcgtccttgtaaatataggtcatttgaa 355  Q
    ||||||||||||||||||||||||||||||    
T  13480578 tttcgtccttgtaaatataggtcatttgaa 13480549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 67; Significance: 2e-29; HSPs: 5)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 355 - 525
Target Start/End: Complemental strand, 11155 - 10985
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| |  | ||||||||| |||||||| ||||  || |||||||||||| | | |||||||||||||||||||| |||||    
T  11155 aaatattaatcatttgaaaaatggtcttaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatt 11056  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    |||| ||||||  | | ||||||||||||||||||| |||||||| || | |||| ||| |||||||||||    
T  11055 taagccaaccatctcgtccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagc 10985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 667
Target Start/End: Complemental strand, 10963 - 10856
Alignment:
Q  560 atcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaaga 658  Q
    ||||||||||||||||||||  |||||| || || | || ||| ||||||||||||  |||| |||||||||||||  |||| |||||||||||||||||    
T  10963 atcaaaagtcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctata-tttgcagggacgaaaga 10865  T
Q  659 cctatttaa 667  Q
    |||||||||    
T  10864 cctatttaa 10856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 11116 - 11053
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||||||| |||| |||||||||||||  ||||||| |||||||||||||||||||||||    
T  11116 attagtaacttcaaggacgaaaattcaaatgacctatattt-gcagggacgaaagacctatttaa 11053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 667
Target Start/End: Original strand, 11139 - 11238
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  |||||| || || | || |||||||| |||||||| |||| |||||||||||||  |||| ||| |||||||||||||||| ||||    
T  11139 tcaaatgattaatatttgcaatggcaaaatggaagaattattaacttcaaggacgaaaattcaaatgacctata-tttacagggacgaaagacctgttta 11237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 412 - 458
Target Start/End: Complemental strand, 10901 - 10855
Alignment:
Q  412 gaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||||||| | | |||||||||||||||||||| |||||||||    
T  10901 gaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 10855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 65; Significance: 4e-28; HSPs: 4)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 386 - 559
Target Start/End: Original strand, 10779 - 10952
Alignment:
Q  386 tacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttg 485  Q
    ||||||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| ||||||| |  |||||| ||||||||||||||||||    
T  10779 tacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttatgcaaaccaccttgcccaatcatcacttg 10878  T
Q  486 ccacacgggcaccatgttgataataacaacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||| |||||||| || | |||| |||  ||||||||||       |||||||| || |||||||||||||||    
T  10879 ccacatgggcaccacgtcgctaatgacagtccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgat 10952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 10770 - 10665
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaat-gattatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||||||| |||| ||| ||||||||| ||||||||||| | ||||| |||||||||  ||||||||    
T  10770 caaaagtcaaatgattaatatttgcaggggcatattgaaaggattaataatttcagggacgaaaattcaaatggcttata-tttgcaggggtgaaagacc 10672  T
Q  661 tatttaa 667  Q
    |||||||    
T  10671 tatttaa 10665  T

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Target: scaffold0321; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 604 - 666
Target Start/End: Original strand, 10787 - 10849
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||| ||||||||||||||    
T  10787 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaagacctattta 10849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 667
Target Start/End: Original strand, 10970 - 11043
Alignment:
Q  594 gattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||  ||||||||||||| |||| |||||||||||||  |||| |||||||||||||||||| |||||||    
T  10970 gattgaaaagattagtaacttcatggacgaaaattcaaatgacctata-tttgcagggacgaaagacatatttaa 11043  T

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Target: scaffold0022 (Bit Score: 65; Significance: 4e-28; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 355 - 499
Target Start/End: Original strand, 120285 - 120429
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| || ||||||| | ||||||||| |||||||| ||||  || |||||||||||| |   ||||||||||||||||||||||||||    
T  120285 aaatattaatcatttgaataatgattttaattacatctgattagtaacttcatggacgaaaattcaaataacatatatttgcagggacgaaagatctatt 120384  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcacca 499  Q
    ||||||||| || | |||||||||||||||| |||| | ||||||    
T  120385 taagtcaactacctcgcccaatcatcacttgtcacatgagcacca 120429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 457
Target Start/End: Complemental strand, 120253 - 120208
Alignment:
Q  412 gaaaattcaaattatcaatatttgcagggacgaaagatctatttaa 457  Q
    |||||||||||| ||| | |||||||||||||||||| ||||||||    
T  120253 gaaaattcaaatgatctacatttgcagggacgaaagacctatttaa 120208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 10433 - 10328
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat-tatattttgcagggacgaaagacc 660  Q
    ||||||||||||||||||  ||||||| | || |||| ||| |||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||    
T  10433 caaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgatctata-tttgcagggacgaaagacc 10335  T
Q  661 tatttaa 667  Q
    |||||||    
T  10334 tatttaa 10328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 10391 - 10327
Alignment:
Q  394 attagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaag 458  Q
    |||||||| ||||| || |||||||||||| ||| |||||||||||||||||||| |||||||||    
T  10391 attagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacctatttaag 10327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 59; Significance: 1e-24; HSPs: 3)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 355 - 525
Target Start/End: Original strand, 14321 - 14491
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||  | |||||||||||| |||||||| ||||  || ||||||||||||  |  ||||||||| |||||||||| | |||    
T  14321 aaatattaataatttgaaaaatcgtcctgattacatctgattagtaacttcaaggatgaaaattcaaatggtatatatttgcaaggacgaaagaccaatt 14420  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataacaacccacctcagc 525  Q
    || | ||||||| | ||||||||||||||||||||| ||||||||  | | |||| ||||||||| |||||    
T  14421 tatgccaaccacctcgcccaatcatcacttgccacatgggcaccacatcgttaatgacaacccacgtcagc 14491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 669
Target Start/End: Complemental strand, 14337 - 14236
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    |||||| |||||  ||||||||| || |||| ||| ||||||||| ||| |||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  14337 tcaaattattaatatttgcagtggcaaattggaaggattagtaacctcaaggacgaaaattcaaatgacttatattt-gcagggacgaaagacctattta 14239  T
Q  667 aac 669  Q
    |||    
T  14238 aac 14236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 561 - 667
Target Start/End: Original strand, 14509 - 14615
Alignment:
Q  561 tcaaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagac 659  Q
    |||||||| ||||||||||  ||| ||||| ||||||  ||| ||||||||||||| |||| |||||||||||||  |||| ||| |||||| ||| |||    
T  14509 tcaaaagttaaatgattaatatttacagtggcagatttgaaggattagtaacttcaaggacgaaaattcaaatgacctata-tttacagggaggaaggac 14607  T
Q  660 ctatttaa 667  Q
    ||||||||    
T  14608 ctatttaa 14615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 55; Significance: 4e-22; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 412 - 559
Target Start/End: Complemental strand, 14134 - 13987
Alignment:
Q  412 gaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcacttgccacacgggcaccatgttgataataa 511  Q
    |||||||||||| | | ||||||||||||| |||||| ||||||||   |||||| | ||||||||||||||||||||| ||||||||  | | ||||||    
T  14134 gaaaattcaaatgacctatatttgcagggatgaaagacctatttaatcaaaccacctcgcccaatcatcacttgccacatgggcaccacatcgctaataa 14035  T
Q  512 caacccacctcagcnnnnnnncctaattatgatcaaaagtcaaatgat 559  Q
    ||||||||||||||       | |||||| || |||||||||||||||    
T  14034 caacccacctcagcaaaataacataattaggaccaaaagtcaaatgat 13987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 562 - 636
Target Start/End: Original strand, 14169 - 14243
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat 636  Q
    ||||||||||||||||||  |||| || | ||||||| ||| |||||||||||||| ||  ||||||||||||||    
T  14169 caaaagtcaaatgattaatatttgtaggggcagattggaaggattagtaacttcagtgatgaaaattcaaatgat 14243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 53; Significance: 6e-21; HSPs: 4)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 355 - 495
Target Start/End: Original strand, 8519 - 8659
Alignment:
Q  355 aaatattaattatttaaaaaatgattctgattacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatt 454  Q
    |||||||||| |||| ||||||| | || ||||||||| ||||||||  |||| ||   |||||||||| |   |||||||||||||||||||| |||||    
T  8519 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacatcagggacagaaattcaaatgacagatatttgcagggacgaaagacctatt 8618  T
Q  455 taagtcaaccacattgcccaatcatcacttgccacacgggc 495  Q
    |||| ||||||  | ||||||||||||||||||||| ||||    
T  8619 taagccaaccatctcgcccaatcatcacttgccacatgggc 8659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 568 - 667
Target Start/End: Complemental strand, 8535 - 8436
Alignment:
Q  568 tcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctattta 666  Q
    ||||||||||||  ||||||||| ||||||| ||| |||||||||||||||||| |||||||||||||  |||| |||  || |||||||||||||||||    
T  8535 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctata-tttaaagagacgaaagacctattta 8437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 667
Target Start/End: Original strand, 8709 - 8813
Alignment:
Q  563 aaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacct 661  Q
    |||||||||||||||||  |||||||||||| |||| ||| |||| |||||||  |||   ||||||||||||  |||| ||| ||||||||||| ||||    
T  8709 aaaagtcaaatgattaatatttgcagtgacaaattggaaggattaataacttcgcggatggaaattcaaatgacctata-tttacagggacgaaatacct 8807  T
Q  662 atttaa 667  Q
    ||||||    
T  8808 atttaa 8813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 8558 - 8621
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    ||||||||| ||||||||| ||||||||||||   ||| ||||||||||||||||||||||||||    
T  8558 attagtaacatcagggacagaaattcaaatgacagata-tttgcagggacgaaagacctatttaa 8621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 50; Significance: 3e-19; HSPs: 3)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 384 - 489
Target Start/End: Complemental strand, 862 - 757
Alignment:
Q  384 attacatcttattagtaagttcagagaagaaaattcaaattatcaatatttgcagggacgaaagatctatttaagtcaaccacattgcccaatcatcact 483  Q
    |||| |||| |||||||| ||||| || |||||||||||| | | ||||||||||||| |||||| |||||||||  |||||| | ||||||||||||||    
T  862 attatatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagaaaaccacctcgcccaatcatcact 763  T
Q  484 tgccac 489  Q
    ||||||    
T  762 tgccac 757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 869 - 974
Alignment:
Q  562 caaaagtcaaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgattatattttgcagggacgaaagacct 661  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||| ||||||||||||   |   ||| |||||||||||||| |    
T  869 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggccaatatttacagggacgaaagacat 968  T
Q  662 atttaa 667  Q
    ||||||    
T  969 atttaa 974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 667
Target Start/End: Complemental strand, 852 - 789
Alignment:
Q  604 attagtaacttcagggacaaaaattcaaatga-ttatattttgcagggacgaaagacctatttaa 667  Q
    |||||||||||||||||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  852 attagtaacttcagggacgaaaattcaaatgacctata-tttgcagggatgaaagacctatttaa 789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 570 - 636
Target Start/End: Complemental strand, 12119 - 12053
Alignment:
Q  570 aaatgattaaattttgcagtgacagattgaaagaattagtaacttcagggacaaaaattcaaatgat 636  Q
    ||||||||||  ||| || ||| |||||||||| |||| |||||||||||||||||||| |||||||    
T  12119 aaatgattaatatttacaatgaaagattgaaaggattactaacttcagggacaaaaatttaaatgat 12053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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