View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2918R-Insertion-5 (Length: 768)
Name: NF2918R-Insertion-5
Description: NF2918R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2918R-Insertion-5 |
 | |
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| [»] chr2 (7 HSPs) |
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| [»] scaffold0059 (1 HSPs) |
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| [»] chr4 (1 HSPs) |
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| [»] chr1 (4 HSPs) |
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| [»] chr3 (3 HSPs) |
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| [»] chr5 (2 HSPs) |
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| [»] scaffold0031 (1 HSPs) |
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| [»] chr8 (2 HSPs) |
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| [»] scaffold0056 (2 HSPs) |
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| [»] chr6 (2 HSPs) |
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| [»] scaffold0054 (1 HSPs) |
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| [»] scaffold0099 (1 HSPs) |
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| [»] scaffold0039 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 617; Significance: 0; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 617; E-Value: 0
Query Start/End: Original strand, 15 - 768
Target Start/End: Original strand, 23776378 - 23777129
Alignment:
| Q |
15 |
agaatatgtgagaacttttaatatttagttgaaacaccaaaacaaatcaaagagcacctaataattgaaacttacaccaatagaagaacacccacgtaac |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23776378 |
agaatatgtgagaacttttaatatttagttgaaacaccaaaacaaatcatagagcacctaataattgaaacttacaccaatagaagaacacccacgtaac |
23776477 |
T |
|
| Q |
115 |
atagaaacgtaattaaattttagacacatgcactccaccgaatgaaggaacttacgtgtgctaagaagttgtttgattactaacgaaaacaattgattga |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23776478 |
atagaaacgtaattaaattttagacacatgcactccaccgaatgaaggaactaacttgtgctaagaagttgtttgattactaacgaaaacaattgattga |
23776577 |
T |
|
| Q |
215 |
ctgaaatcgaacaggaaatcggtgaggtggagagcaaacttgtgaaaacggtagcgacagaaataatgcgattgaagacttggaggttaaccgattggaa |
314 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23776578 |
ctgaaatcgaacaggaaaccggtgaggtggagagcaaacttgtgaaaacgacaacaacataaataatgcgattgaagacttggaggttaaccgattggaa |
23776677 |
T |
|
| Q |
315 |
aaaattgagaaaacaatcgatgtgaagaaacagtacggtggtaaagtatcagaccctgtgattacgttgttggcttaaatcatccatcatcatcaggaga |
414 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
23776678 |
gaaattgagaaaacaagcgatgtgaagaaacaatacggcggtaaagtatcagaccctgtgattacgttgttggcttaaataatc---catcatcaggaga |
23776774 |
T |
|
| Q |
415 |
aaaacaagaaaagaacacgattatgattgaaaatcaatctaatcgacaaaacagactctcacaaggggcgatgagtgaaaccctaggagagaaaaatcgc |
514 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
23776775 |
aaaacaagaaaagaacacgattaagattgaaaatcaatctaatcgacaaaacagactctcacaaggggcgatgagtgaaaccctaggagagaaaaatcac |
23776874 |
T |
|
| Q |
515 |
aaaatcgcttaatcgcttcttcacaatag-tacacagtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtctta |
613 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||||||||||||||||||| | |||| ||||||||| |
|
|
| T |
23776875 |
aaaatcgcttaatcgcttcttcacaatagttacacggtaccaactttttgtgtcaacaaattaaccattttgtgattactctcgtccatttgttgtctta |
23776974 |
T |
|
| Q |
614 |
acagattcatcgaatctgttgttaagggtagtagaatactttgaccgaaaatgctagaacttgagggactatgtacgttattgtgaacgaatttgtttgt |
713 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |
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|
| T |
23776975 |
acagattcatcgactctgttgttaagggtagtagagtactttgaccgaaaatgctagaacttgagggactatgtacgtaattgtgaacggatttttttgt |
23777074 |
T |
|
| Q |
714 |
tctgcagatgcggacgcactattatgcacatttgccatcatcgaagttggcatac |
768 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23777075 |
tctgcaaatgcggacgcactattatgcacatttgccatcatcgaagttggcatac |
23777129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 571 - 768
Target Start/End: Original strand, 23802394 - 23802595
Alignment:
| Q |
571 |
aaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtagtagaatactttgaccgaaaatgctag |
670 |
Q |
| |
|
||||| ||||||| |||||||||||||| |||| |||| ||||||| ||||||||||||||||||||| ||| ||||| || ||||||| |||||||| | |
|
|
| T |
23802394 |
aaattaaccatttcgtgattactctcatccatttgttgccttaacaaattcatcgaatctgttgttaatggtggtagagtattttgaccaaaaatgctcg |
23802493 |
T |
|
| Q |
671 |
aacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgcacatttgccatcatcgaagttggcat |
766 |
Q |
| |
|
|||| ||||||||||||| ||| |||||||| | ||||| ||| |||| | ||||||||||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
23802494 |
aactcgagggactatgtatgttgtgcattgtgaatggatttgcttggtctgaaaatgcggacgcactattatgtacattttccatcatcgaagttggcat |
23802593 |
T |
|
| Q |
767 |
ac |
768 |
Q |
| |
|
|| |
|
|
| T |
23802594 |
ac |
23802595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 552 - 768
Target Start/End: Complemental strand, 27604559 - 27604339
Alignment:
| Q |
552 |
accaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtagtagaata |
651 |
Q |
| |
|
||||||||||||||| |||||||| | ||||| ||| |||||||||| |||| ||||||||||| |||||||||||||||||| || | | ||||| || |
|
|
| T |
27604559 |
accaatttgttgtgttaacaaattaatcatttcgtggttactctcatccattttttgtcttaacaaattcatcgaatctgttgtcaatgttggtagagta |
27604460 |
T |
|
| Q |
652 |
ctttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgcacatttg |
747 |
Q |
| |
|
| |||| || ||||||||||||||||||||||||||||| |||||||||| |||| ||| |||||| |||| |||||||||||||| ||||||| |
|
|
| T |
27604459 |
ttccgaccaaatatgctagaacttgagggactatgtacgttgtgcattgtgaacgggtttgcttggtctgcaaatgcagacgcactattatgtacatttg |
27604360 |
T |
|
| Q |
748 |
ccatcatcgaagttggcatac |
768 |
Q |
| |
|
|||||||| ||||||||||| |
|
|
| T |
27604359 |
ccatcatcagagttggcatac |
27604339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 545 - 692
Target Start/End: Complemental strand, 24985804 - 24985657
Alignment:
| Q |
545 |
acacagtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtag |
644 |
Q |
| |
|
|||| ||||||||||||||||| ||| |||| ||||||| ||| |||||||||| |||| |||||||||||| |||||||||||||||||| || || | |
|
|
| T |
24985804 |
acacggtaccaatttgttgtgttaacgaattaaccatttcgtggttactctcatccatttgttgtcttaacaaattcatcgaatctgttgtcaaccgtgg |
24985705 |
T |
|
| Q |
645 |
tagaatactttgaccgaaaatgctagaacttgagggactatgtacgtt |
692 |
Q |
| |
|
|||| || | ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24985704 |
tagagtattccgaccgaaaatgctagaacttgagggactatgtacgtt |
24985657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 545 - 768
Target Start/End: Original strand, 22800636 - 22800863
Alignment:
| Q |
545 |
acacagtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtag |
644 |
Q |
| |
|
|||| |||||||||| || ||| |||||||| ||||||| || ||||||||||| |||| |||| ||||| | ||| |||||||||||||||| |||| | |
|
|
| T |
22800636 |
acacggtaccaattttttttgtaaacaaattaaccatttcgtaattactctcatccatttgttgccttaaaaaattaatcgaatctgttgttacgggtgg |
22800735 |
T |
|
| Q |
645 |
tagaatactttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgc |
740 |
Q |
| |
|
|||| || || ||| |||||||||||| ||||||||||||||| | | |||||||||||||||| ||| ||| || ||| |||| |||||||||| |
|
|
| T |
22800736 |
tagagtatttcaaccaaaaatgctagaaattgagggactatgtatggtgtgcattgtgaacgaatttgcttgatctacaaatgtggacacactattatgt |
22800835 |
T |
|
| Q |
741 |
acatttgccatcatcgaagttggcatac |
768 |
Q |
| |
|
| ||||| ||||||| |||||||||||| |
|
|
| T |
22800836 |
aaatttgacatcatcaaagttggcatac |
22800863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 545 - 768
Target Start/End: Original strand, 25596869 - 25597096
Alignment:
| Q |
545 |
acacagtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtag |
644 |
Q |
| |
|
|||| |||||||||| ||||||||||||||| ||||||| |||||||| ||||| |||| ||||| |||||| |||| ||||||||| |||||| | |
|
|
| T |
25596869 |
acacggtaccaatttcttgtgtcaacaaattaaccatttcgtgattaccctcatccatttgttgtgttaacaagttcaccgaatctgtcgttaagactga |
25596968 |
T |
|
| Q |
645 |
tagaatactttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgc |
740 |
Q |
| |
|
|| | || || |||| ||||||||||||||| |||||||||||| ||| ||||||||| ||||| ||| ||| || ||||||||||||||||||| |
|
|
| T |
25596969 |
tatagtatttcgaccaaaaatgctagaactttagggactatgtatgttgtgcattgtgaacatatttgcttggtcttcaaatgcggacgcactattatgt |
25597068 |
T |
|
| Q |
741 |
acatttgccatcatcgaagttggcatac |
768 |
Q |
| |
|
||||||||||| | ||||||||||||| |
|
|
| T |
25597069 |
acatttgccattactgaagttggcatac |
25597096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 583
Target Start/End: Original strand, 20270742 - 20270775
Alignment:
| Q |
550 |
gtaccaatttgttgtgtcaacaaattgaccattt |
583 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |
|
|
| T |
20270742 |
gtaccaatttgttgtgtcaacatattgaccattt |
20270775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 135; Significance: 6e-70; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 318 - 518
Target Start/End: Complemental strand, 32298418 - 32298219
Alignment:
| Q |
318 |
attgagaaaacaatcgatgtgaagaaa-cagtacggtggtaaagtatcagaccctgtgattacgttgttggcttaaatcatccatcatcatcaggagaaa |
416 |
Q |
| |
|
||||| ||||||| ||||||||| ||| || ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| | ||| |
|
|
| T |
32298418 |
attgacaaaacaagcgatgtgaaaaaaacaatacggcggtaaagtatcagaccatgtgattacgttgttggcttaaatcatccatcaacat--gtgaaaa |
32298321 |
T |
|
| Q |
417 |
aacaagaaaagaacacgattatgattgaaaatcaatctaatcgacaaaacagactctcacaaggggcgatgagtgaaaccctaggagagaaaaatcgcaa |
516 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
32298320 |
aacaagaaaagaacacgattaagattgaaaatcaatctaatcgacaaaacagactctcacaaggggcgatgagtgaaaccgtaggagagaaaaatcgcaa |
32298221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 545 - 768
Target Start/End: Original strand, 7964875 - 7965102
Alignment:
| Q |
545 |
acacagtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtag |
644 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||| |||||||||||| ||||| |||||||| |||||| | | |
|
|
| T |
7964875 |
acacagtaccaatttgttgtgtcaacaaattaaccatttcgtgattactctcatccatttgttgtcttaacaagttcattgaatctgtcgttaagactgg |
7964974 |
T |
|
| Q |
645 |
tagaatactttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgc |
740 |
Q |
| |
|
|||| || || |||| |||||| |||||||||||||||||||| |||| ||||||||| ||||| ||| |||||| ||||||||||||||||||| |
|
|
| T |
7964975 |
tagattatttcgaccaaaaatgttagaacttgagggactatgtgcgttgtgaattgtgaacagatttgcttggtctgcaaatgcggacgcactattatgt |
7965074 |
T |
|
| Q |
741 |
acatttgccatcatcgaagttggcatac |
768 |
Q |
| |
|
|||||||||||||| ||||||||||||| |
|
|
| T |
7965075 |
acatttgccatcattgaagttggcatac |
7965102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 545 - 768
Target Start/End: Complemental strand, 18099393 - 18099166
Alignment:
| Q |
545 |
acacagtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtag |
644 |
Q |
| |
|
|||| |||||||||||||| || |||||||| ||||||| ||| ||| |||||| |||| |||||||||||| ||||||||||| ||| || || ||| | |
|
|
| T |
18099393 |
acacggtaccaatttgttgcgttaacaaattaaccatttcgtggttagtctcatccatttgttgtcttaacaaattcatcgaatatgtcgtcaacggtgg |
18099294 |
T |
|
| Q |
645 |
tagaatactttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgc |
740 |
Q |
| |
|
|| | || | |||| ||||| |||||||||||||||| ||||||||| ||||||||| ||||| ||| |||||| ||||||||||||||| ||| |
|
|
| T |
18099293 |
tatagtattccgaccaaaaattctagaacttgagggacaatgtacgttgtgcattgtgaacatatttgcttgatctgcaaatgcggacgcactatgatgt |
18099194 |
T |
|
| Q |
741 |
acatttgccatcatcgaagttggcatac |
768 |
Q |
| |
|
|||||| ||||||||||||||||||||| |
|
|
| T |
18099193 |
acattttccatcatcgaagttggcatac |
18099166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 545 - 689
Target Start/End: Original strand, 14952592 - 14952736
Alignment:
| Q |
545 |
acacagtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtag |
644 |
Q |
| |
|
|||| |||||||||| || || |||||||| ||||||| ||| |||||||||| |||| |||||||||||| |||||| |||| |||||| || | |
|
|
| T |
14952592 |
acacggtaccaatttattacgttaacaaattaaccatttcgtggttactctcatccatttgttgtcttaacaaattcatggaatttgttgtcaacaacgg |
14952691 |
T |
|
| Q |
645 |
tagaatactttgaccgaaaatgctagaacttgagggactatgtac |
689 |
Q |
| |
|
|||| || | |||| ||||||||||||||||||||| ||||||| |
|
|
| T |
14952692 |
tagagtattccgaccaaaaatgctagaacttgagggaatatgtac |
14952736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 545 - 689
Target Start/End: Original strand, 15380185 - 15380329
Alignment:
| Q |
545 |
acacagtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtag |
644 |
Q |
| |
|
|||| |||||||||| || || |||||||| ||||||| ||| |||||||||| |||| |||||||||||| |||||| |||| |||||| || | |
|
|
| T |
15380185 |
acacggtaccaatttattacgttaacaaattaaccatttcgtggttactctcatccatttgttgtcttaacaaattcatggaatttgttgtcaacaacgg |
15380284 |
T |
|
| Q |
645 |
tagaatactttgaccgaaaatgctagaacttgagggactatgtac |
689 |
Q |
| |
|
|||| || | |||| ||||||||||||||||||||| ||||||| |
|
|
| T |
15380285 |
tagagtattccgaccaaaaatgctagaacttgagggaatatgtac |
15380329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 545 - 768
Target Start/End: Original strand, 37193 - 37420
Alignment:
| Q |
545 |
acacagtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtag |
644 |
Q |
| |
|
|||| |||||||||| ||||||||| ||||| ||||||| |||||||||||||| ||| |||||||||||| |||||||||||| ||| |||| | | |
|
|
| T |
37193 |
acacggtaccaatttcttgtgtcaataaattaaccatttcgtgattactctcatctatttgttgtcttaacaaattcatcgaatcacttgataagactgg |
37292 |
T |
|
| Q |
645 |
tagaatactttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgc |
740 |
Q |
| |
|
|||| || ||||||| ||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| ||||||||||||||| ||||||||||| |
|
|
| T |
37293 |
tagagtattttgaccaaaaatgctagaacttgagggactatgtgcgttgtgagttgtgaacggatttgcttggtctgcagatgcggacacactattatgc |
37392 |
T |
|
| Q |
741 |
acatttgccatcatcgaagttggcatac |
768 |
Q |
| |
|
|||||| ||||||||||||||||||||| |
|
|
| T |
37393 |
acattttccatcatcgaagttggcatac |
37420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 104; Significance: 2e-51; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 552 - 768
Target Start/End: Complemental strand, 12812046 - 12811826
Alignment:
| Q |
552 |
accaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtagtagaata |
651 |
Q |
| |
|
|||||||||| |||| |||||||| ||||||| |||||||||||||| |||| |||||||||||| ||||||||||||||||| || ||| ||||| || |
|
|
| T |
12812046 |
accaatttgtcgtgttaacaaattaaccatttcgtgattactctcatccatttgttgtcttaacaaattcatcgaatctgttgacaacggtggtagagta |
12811947 |
T |
|
| Q |
652 |
ctttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgcacatttg |
747 |
Q |
| |
|
|| |||| ||||||||||||||| |||||||||||| ||| |||||||||| ||||| ||| |||||| |||||||| |||||||||| | ||||| |
|
|
| T |
12811946 |
tttcgaccaaaaatgctagaacttaagggactatgtatgttgtgcattgtgaacggatttgattgatctgcaaatgcggacacactattatgtatatttg |
12811847 |
T |
|
| Q |
748 |
ccatcatcgaagttggcatac |
768 |
Q |
| |
|
||||||| ||||||||||||| |
|
|
| T |
12811846 |
ccatcattgaagttggcatac |
12811826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 103; Significance: 8e-51; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 545 - 768
Target Start/End: Complemental strand, 10159910 - 10159683
Alignment:
| Q |
545 |
acacagtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtag |
644 |
Q |
| |
|
|||| ||||||||||||||||| |||||||| ||||||||||| |||||||| | || | |||||||||||| |||||||||||||||||| || | | | |
|
|
| T |
10159910 |
acacggtaccaatttgttgtgttaacaaattaaccattttgtggttactctcgtccaattgttgtcttaacaaattcatcgaatctgttgtcaacgttgg |
10159811 |
T |
|
| Q |
645 |
tagaatactttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgc |
740 |
Q |
| |
|
|||| || | |||| |||||||||||||||||||||||||||||||| ||| |||||| |||| ||| |||||| |||||||| |||||||||| |
|
|
| T |
10159810 |
tagagtattccgaccaaaaatgctagaacttgagggactatgtacgttgtgcattatgaacggattttcttggtctgcaaatgcggacacactattatgt |
10159711 |
T |
|
| Q |
741 |
acatttgccatcatcgaagttggcatac |
768 |
Q |
| |
|
|||||||| ||||||||||||||||||| |
|
|
| T |
10159710 |
acatttgcaatcatcgaagttggcatac |
10159683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 550 - 768
Target Start/End: Original strand, 17024048 - 17024270
Alignment:
| Q |
550 |
gtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtagtagaa |
649 |
Q |
| |
|
|||||||||||||||| |||| |||| ||||||| ||||||||||||| |||| |||||||||||| ||||||||||| ||| ||||| | ||||| |
|
|
| T |
17024048 |
gtaccaatttgttgtgccaacgaattaaccatttcatgattactctcatccatttgttgtcttaacaaattcatcgaattagtttttaagactggtagag |
17024147 |
T |
|
| Q |
650 |
tactttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgcacatt |
745 |
Q |
| |
|
|| || |||| ||||||||||||||| |||||||||| ||| |||||||||| ||||||||| |||| | ||| ||||||||||||||||| ||| |
|
|
| T |
17024148 |
tatttcgaccaaaaatgctagaactttggggactatgtgtgttgtgaattgtgaacggatttgtttggtctgaaaatgtggacgcactattatgcaaatt |
17024247 |
T |
|
| Q |
746 |
tgccatcatcgaagttggcatac |
768 |
Q |
| |
|
| |||||||||||||||| |||| |
|
|
| T |
17024248 |
ttccatcatcgaagttggaatac |
17024270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 545 - 768
Target Start/End: Original strand, 25400778 - 25401004
Alignment:
| Q |
545 |
acacagtaccaatttgttgtgtcaacaaattgaccattttgtgatta--ctctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggt |
642 |
Q |
| |
|
|||| |||| |||||||| ||| |||||||| ||||||||||| ||| ||||| | |||| || ||||||||| |||||| ||||||||||| || | | |
|
|
| T |
25400778 |
acacggtacaaatttgttatgttaacaaattaaccattttgtggttatactctcgtccatttgtcgtcttaacaaattcattgaatctgttgtcaacgtt |
25400877 |
T |
|
| Q |
643 |
agtagaatactttgaccgaaaatgctagaacttgagggactatgtacgtt-attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgca |
741 |
Q |
| |
|
||||| || | |||| ||||||||||||||||||||| |||||||| |||||||||| ||||| ||| |||||| |||||||| |||||||||| | |
|
|
| T |
25400878 |
ggtagagtattccgaccagaaatgctagaacttgagggaccatgtacgtgcattgtgaacggatttgcttggtctgcaaatgcggacacactattatgta |
25400977 |
T |
|
| Q |
742 |
catttgccatcatcgaagttggcatac |
768 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
25400978 |
gatttgccatcatcgaagttggcatac |
25401004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 545 - 768
Target Start/End: Complemental strand, 21292125 - 21291898
Alignment:
| Q |
545 |
acacagtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtag |
644 |
Q |
| |
|
|||| |||||||||||||| || |||||| | ||||||| ||| ||| |||||| |||| ||| ||| |||| ||||||||||||||||||||| ||| | |
|
|
| T |
21292125 |
acactgtaccaatttgttgcgttaacaaactaaccatttcgtggttagtctcatccatttgttatctcaacacattcatcgaatctgttgttaatggtgg |
21292026 |
T |
|
| Q |
645 |
tagaatactttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgc |
740 |
Q |
| |
|
|||| || | |||| ||||| ||| ||||||| |||||||||| ||| || ||||||| ||||| ||| |||| | | |||| ||||||||||| |
|
|
| T |
21292025 |
tagagtattccgaccaaaaatactataacttgaaggactatgtatgttgtgcatagtgaacggatttgcttggtctgaaaaaacggaagcactattatgt |
21291926 |
T |
|
| Q |
741 |
acatttgccatcatcgaagttggcatac |
768 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
21291925 |
acatttgccatcatcgaagttggcatac |
21291898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 101; Significance: 1e-49; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 551 - 768
Target Start/End: Original strand, 11426770 - 11426991
Alignment:
| Q |
551 |
taccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtagtagaat |
650 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||||||||||||| ||| |||||||||||| |||||| ||||||||| | || ||| ||||| | |
|
|
| T |
11426770 |
taccaatttgttgtgtcaacaaattaaccatttcgtgattactctcatccatgtgttgtcttaacaaattcattgaatctgttttcaacggtggtagagt |
11426869 |
T |
|
| Q |
651 |
actttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgcacattt |
746 |
Q |
| |
|
| || |||| |||||||||||||||||||||||||||| ||| |||||||||| ||||| ||| |||||| ||||||| ||||| ||||| |||||| |
|
|
| T |
11426870 |
atttcgaccaaaaatgctagaacttgagggactatgtatgttgtgcattgtgaacggatttgcttgatctgcaaatgcggaagcacttttatgtacattt |
11426969 |
T |
|
| Q |
747 |
gccatcatcgaagttggcatac |
768 |
Q |
| |
|
||||||| |||||| |||||| |
|
|
| T |
11426970 |
tccatcattgaagtttgcatac |
11426991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 545 - 768
Target Start/End: Original strand, 16924474 - 16924700
Alignment:
| Q |
545 |
acacagtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtag |
644 |
Q |
| |
|
|||| |||||||||| ||||||||||||||| ||||||| ||| |||||||||| |||| |||||||||||| ||||||| ||| |||||| || ||| | |
|
|
| T |
16924474 |
acacggtaccaattttttgtgtcaacaaattaaccatttcgtggttactctcatccatttgttgtcttaacaaattcatc-aatgtgttgtcaacggtgg |
16924572 |
T |
|
| Q |
645 |
tagaatactttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgc |
740 |
Q |
| |
|
|||| || | |||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||| | | || | |||||| |||| |
|
|
| T |
16924573 |
tagagtattccgaccaaaaatgctagaacttgagggactatgtacgttgtgcattgtgaacggatttgcttggtctgtaaaaacgaaagcactactatgt |
16924672 |
T |
|
| Q |
741 |
acatttgccatcatcgaagttggcatac |
768 |
Q |
| |
|
| ||||||||||||| ||| |||||||| |
|
|
| T |
16924673 |
aaatttgccatcatcaaaggtggcatac |
16924700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 628 - 768
Target Start/End: Original strand, 22927574 - 22927718
Alignment:
| Q |
628 |
tctgttgttaagggtagtagaatactttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatg |
723 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| | |||||||| ||||| ||| | |||| ||| |
|
|
| T |
22927574 |
tctgttgttaagggtggtagagtactttgaccgaaaatgctagaacttgagggaatatgtacgttgtgcactgtgaacggatttgcttggtgtgcaaatg |
22927673 |
T |
|
| Q |
724 |
cggacgcactattatgcacatttgccatcatcgaagttggcatac |
768 |
Q |
| |
|
||| ||| ||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
22927674 |
cggttgcattattatgcacatttgccattatcgaagatggcatac |
22927718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 97; Significance: 3e-47; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 551 - 768
Target Start/End: Original strand, 22805682 - 22805903
Alignment:
| Q |
551 |
taccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtagtagaat |
650 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||||||||||||| ||| ||||| |||||| ||||||||| |||| |||||| | ||||| | |
|
|
| T |
22805682 |
taccaatttgttgtgtcaacaaattaaccatttcgtgattactctcatctatttgttgtattaacaagttcatcgaacctgtcgttaagactggtagagt |
22805781 |
T |
|
| Q |
651 |
actttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgcacattt |
746 |
Q |
| |
|
| || |||| ||||||||||||||||| |||||||||| ||| |||||||||| ||||| ||| |||||| |||| |||||||||||||| |||||| |
|
|
| T |
22805782 |
atttcgaccaaaaatgctagaacttgaaggactatgtatgttgtgcattgtgaacggatttgcttggtctgcaaatgctgacgcactattatgtacattt |
22805881 |
T |
|
| Q |
747 |
gccatcatcgaagttggcatac |
768 |
Q |
| |
|
| ||| |||||||||||||||| |
|
|
| T |
22805882 |
gtcattatcgaagttggcatac |
22805903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 693 - 768
Target Start/End: Complemental strand, 24924971 - 24924896
Alignment:
| Q |
693 |
attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgcacatttgccatcatcgaagttggcatac |
768 |
Q |
| |
|
|||||||||| ||||| ||| |||||| ||||||||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
24924971 |
attgtgaacggatttgcttggtctgcaaatgcggacgcactattatgtgcatttgtcatcatcgaagttggcatac |
24924896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0031
Description:
Target: scaffold0031; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 545 - 768
Target Start/End: Original strand, 34390 - 34617
Alignment:
| Q |
545 |
acacagtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtag |
644 |
Q |
| |
|
|||| ||||||||||||||||| |||||||| ||||||||||| |||||||||| |||| |||||||||||| ||||||| |||||||||| || | | |
|
|
| T |
34390 |
acacggtaccaatttgttgtgttaacaaattaaccattttgtggttactctcatccatttgttgtcttaacaaattcatcaaatctgttgtcaacattgg |
34489 |
T |
|
| Q |
645 |
tagaatactttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgc |
740 |
Q |
| |
|
||| || | |||| ||||||||||||||||||||||||||||| || |||||||||| ||||| || |||||| || |||||||||||||| |
|
|
| T |
34490 |
tagggtattccgaccaaaaatgctagaacttgagggactatgtacattgtgcattgtgaacggatttgcttaatctgcaaatctagacgcactattatgt |
34589 |
T |
|
| Q |
741 |
acatttgccatcatcgaagttggcatac |
768 |
Q |
| |
|
||||| |||||||||||||||||||||| |
|
|
| T |
34590 |
acattggccatcatcgaagttggcatac |
34617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 78; Significance: 6e-36; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 550 - 768
Target Start/End: Original strand, 22262987 - 22263209
Alignment:
| Q |
550 |
gtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtagtagaa |
649 |
Q |
| |
|
|||||||||||||| || |||||||| ||||| | ||| |||||||||| |||| |||||||||||| ||||||||||| |||||| || ||| ||||| |
|
|
| T |
22262987 |
gtaccaatttgttgcgttaacaaattaaccatatcgtggttactctcatccatttgttgtcttaacaaattcatcgaatttgttgtcaacggtggtagag |
22263086 |
T |
|
| Q |
650 |
tactttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgcacatt |
745 |
Q |
| |
|
|| | ||| || ||||||||||||||||||||||||||||| || ||||||| ||||| |||| ||||| | |||||||||||||||| ||| |
|
|
| T |
22263087 |
tattccaaccaaatatgctagaacttgagggactatgtacgttgtgcatggtgaacggatttgcttgtcctgcaaaaacggacgcactattatgtacacc |
22263186 |
T |
|
| Q |
746 |
tgccatcatcgaagttggcatac |
768 |
Q |
| |
|
||||||| |||||||||| |||| |
|
|
| T |
22263187 |
tgccatcgtcgaagttggtatac |
22263209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 551 - 719
Target Start/End: Complemental strand, 12149783 - 12149611
Alignment:
| Q |
551 |
taccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtagtagaat |
650 |
Q |
| |
|
|||| |||||||||||||| ||||| ||||||| ||||||||||||| |||| |||||||||||| ||||| |||||||| |||||| | ||||| | |
|
|
| T |
12149783 |
taccgatttgttgtgtcaataaattaaccatttcatgattactctcatccatttgttgtcttaacaagttcatagaatctgtcgttaagactggtagagt |
12149684 |
T |
|
| Q |
651 |
actttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgca |
719 |
Q |
| |
|
| || |||| |||||||||||||||||| ||||||||| ||| |||||||||| ||||| ||| |||||| |
|
|
| T |
12149683 |
atttcgaccaaaaatgctagaacttgagagactatgtatgttgtgcattgtgaacggatttgcttggtctgca |
12149611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0056 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0056
Description:
Target: scaffold0056; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 550 - 768
Target Start/End: Complemental strand, 50870 - 50648
Alignment:
| Q |
550 |
gtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtagtagaa |
649 |
Q |
| |
|
|||||||||| |||||| |||||||| | ||| | || |||||||||| |||| ||||||||||| ||||||| |||||||| | || | | || || |
|
|
| T |
50870 |
gtaccaattttttgtgttaacaaattaatcatatcatggttactctcatccattttttgtcttaacaaattcatcaaatctgttatcaacgatggtggag |
50771 |
T |
|
| Q |
650 |
tactttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgcacatt |
745 |
Q |
| |
|
|| | |||| || ||||||||||||||||||||||||||||| || ||||||| ||||| ||||||| || | ||||| ||||||||||| ||| | |
|
|
| T |
50770 |
tattccgaccaaatatgctagaacttgagggactatgtacgttgtgcatggtgaacggatttgcttgttctacaaaagcggatgcactattatgtacact |
50671 |
T |
|
| Q |
746 |
tgccatcatcgaagttggcatac |
768 |
Q |
| |
|
||||||| | ||||||||||||| |
|
|
| T |
50670 |
tgccatcgttgaagttggcatac |
50648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0056; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 550 - 768
Target Start/End: Complemental strand, 55971 - 55749
Alignment:
| Q |
550 |
gtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtagtagaa |
649 |
Q |
| |
|
|||||||||| |||||| |||||||| | ||| | || |||||||||| |||| ||||||||||| ||||||| |||||||| | || | | || || |
|
|
| T |
55971 |
gtaccaattttttgtgttaacaaattaatcatatcatggttactctcatccattttttgtcttaacaaattcatcaaatctgttatcaacgatggtggag |
55872 |
T |
|
| Q |
650 |
tactttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgcacatt |
745 |
Q |
| |
|
|| | |||| || ||||||||||||||||||||||||||||| || ||||||| ||||| ||||||| || | ||||| ||||||||||| ||| | |
|
|
| T |
55871 |
tattccgaccaaatatgctagaacttgagggactatgtacgttgtgcatggtgaacggatttgcttgttctacaaaagcggatgcactattatgtacact |
55772 |
T |
|
| Q |
746 |
tgccatcatcgaagttggcatac |
768 |
Q |
| |
|
||||||| | ||||||||||||| |
|
|
| T |
55771 |
tgccatcgttgaagttggcatac |
55749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 550 - 768
Target Start/End: Complemental strand, 18377554 - 18377332
Alignment:
| Q |
550 |
gtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtagtagaa |
649 |
Q |
| |
|
|||||||||||||| || |||||||| | |||||| | |||||||||| ||| |||||||||||| ||||||||||| |||||| | ||| ||||| |
|
|
| T |
18377554 |
gtaccaatttgttgcgttaacaaattaagcattttaaggttactctcatctatttgttgtcttaacaaattcatcgaatttgttgtctacggtggtagag |
18377455 |
T |
|
| Q |
650 |
tactttgaccgaaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgcacatt |
745 |
Q |
| |
|
|| | |||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||| | | ||| ||||||||||| ||||| |
|
|
| T |
18377454 |
tattccgaccaaaaatgctagaacttgagggactatgtacgttgtgcattgtgaacggatttgcttggtctgtaaaaaaggaagcactattatgtacatt |
18377355 |
T |
|
| Q |
746 |
tgccatcatcgaagttggcatac |
768 |
Q |
| |
|
|| ||| | || |||||||||| |
|
|
| T |
18377354 |
tgacattagtgacgttggcatac |
18377332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 545 - 692
Target Start/End: Complemental strand, 23011596 - 23011449
Alignment:
| Q |
545 |
acacagtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaacagattcatcgaatctgttgttaagggtag |
644 |
Q |
| |
|
|||| ||| ||||||||||||| ||| |||| ||||| | ||| |||||||||| |||| |||||||||||| ||||||| ||| |||||| || ||| | |
|
|
| T |
23011596 |
acacggtatcaatttgttgtgttaacgaattaaccatatcgtggttactctcatccatttgttgtcttaacaaattcatcaaatatgttgtcaacggtgg |
23011497 |
T |
|
| Q |
645 |
tagaatactttgaccgaaaatgctagaacttgagggactatgtacgtt |
692 |
Q |
| |
|
| || || | |||| || ||| || |||||||||||||||||||||| |
|
|
| T |
23011496 |
tcgactattccgaccaaatatgatataacttgagggactatgtacgtt |
23011449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 661 - 768
Target Start/End: Complemental strand, 77907 - 77796
Alignment:
| Q |
661 |
aaaatgctagaacttgagggactatgtacgtt----attgtgaacgaatttgtttgttctgcagatgcggacgcactattatgcacatttgccatcatcg |
756 |
Q |
| |
|
||||| ||||||||||||||||||||||| || || ||||||| ||||| ||| |||||| | |||| |||||||||| |||||| ||||||| | |
|
|
| T |
77907 |
aaaatactagaacttgagggactatgtacattgtgcatagtgaacggatttgcttggtctgcaaaaacggaagcactattatatacattttccatcattg |
77808 |
T |
|
| Q |
757 |
aagttggcatac |
768 |
Q |
| |
|
|||||||||||| |
|
|
| T |
77807 |
aagttggcatac |
77796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0099 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0099
Description:
Target: scaffold0099; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 693 - 764
Target Start/End: Complemental strand, 38207 - 38133
Alignment:
| Q |
693 |
attgtgaacgaatttgttt--gttctgcagatgcggacgcactattatgcacatttg-ccatcatcgaagttggc |
764 |
Q |
| |
|
|||||||||| |||||| | |||||||| ||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
38207 |
attgtgaacggatttgtcttggttctgcaaatgcggacgcactattatgtgcatttgttcatcatcgaagttggc |
38133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0039 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0039
Description:
Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 545 - 615
Target Start/End: Complemental strand, 47217 - 47147
Alignment:
| Q |
545 |
acacagtaccaatttgttgtgtcaacaaattgaccattttgtgattactctcatgcattcgttgtcttaac |
615 |
Q |
| |
|
|||| |||||||||| |||||| |||||||| ||||||| || || ||||||| |||| ||||||||||| |
|
|
| T |
47217 |
acactgtaccaatttattgtgttaacaaattaaccatttcatggttgctctcatccatttgttgtcttaac |
47147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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