View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2918_low_19 (Length: 241)
Name: NF2918_low_19
Description: NF2918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2918_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 43987146 - 43987382
Alignment:
| Q |
1 |
gaagagaaggacatgagcgtgtgttgttgctgactgtggaatatagtggacacgtgttaagatatttggttgactaggatttagaggaaatgagtaggaa |
100 |
Q |
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| T |
43987146 |
gaagagaaggacatgagcgtgtgttgttgctgactgtggaatatagtggacacgtgttaagatatttggttgactaggatttagaggaaatgagtaggaa |
43987245 |
T |
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| Q |
101 |
ctggggaagattcgttatggacacgtggaggattacggttgctgtaactaaatttatttatctgtttttgtggatttgtaaatgtaattggg----ggaa |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
43987246 |
ctggggaagattcgttatggacacgtggaggattacggttgctgtaactaaatttatttatctgtttttgtggatttgtaaatgtaattgggggaaggaa |
43987345 |
T |
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| Q |
197 |
ggaaggaggagtgaggaaaagatttgaaatgatgatg |
233 |
Q |
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| T |
43987346 |
ggaaggaggagtgaggaaaagatttgaaatgatgatg |
43987382 |
T |
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