View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2920_high_5 (Length: 324)
Name: NF2920_high_5
Description: NF2920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2920_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 10049899 - 10049592
Alignment:
| Q |
1 |
catgtacatatataattgtcagatctagatttagggcattcaataactctagtcaatctaaggcatttgataaaagattgatgactcacacaaatcaaaa |
100 |
Q |
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| T |
10049899 |
catgtacatatataattgtcagatctatatttagggcattcaataactcttgtcaatccaaggcatttgataaaagattgatgactcacacaaatcaaaa |
10049800 |
T |
|
| Q |
101 |
actcaaaagcattaactgtgcggtcacttaccacatcaaattcatttccataactgtgtgtggaatctattaaaatttattgtgaatctcgcaatatatt |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
10049799 |
actcaaaagcattaactgtgtggtcacttaccacatcaaattcatttccataactgtgtgtggaatctattaaaatttattgtgaatctcacaatatatt |
10049700 |
T |
|
| Q |
201 |
aggatatagtt--agcaatgtgaaaaattaccaatgtgcttctcctgctgacggaacttgtaggagtgactcccatctgaattttcaatttcaaaatcaa |
298 |
Q |
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||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
10049699 |
aggatatagatacagc-atgtgaaaaattaccaatgtgcttctcctgctgacggaacttgtaggagtgactcccatctgaaatttcaatttcaaaatcaa |
10049601 |
T |
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| Q |
299 |
tgttaatca |
307 |
Q |
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||||||||| |
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| T |
10049600 |
tgttaatca |
10049592 |
T |
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