View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2920_low_13 (Length: 256)
Name: NF2920_low_13
Description: NF2920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2920_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 7 - 236
Target Start/End: Complemental strand, 32267852 - 32267623
Alignment:
| Q |
7 |
gtgagatgaatgacatggacgcataaagggcttttttgtgttgggttacaaacctctaacaaaccgatcatgctatgcacgttgttatcattgtgcatgc |
106 |
Q |
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| T |
32267852 |
gtgagatgaatgacatggacgcataaagggcttttttgtgttgggttacaaacctctaacaaaccgatcatgctatgcacgttgttatcattgtgcatgc |
32267753 |
T |
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| Q |
107 |
aacaaataatgttgaactctgaattttcaggagtgttttggatcgtcctcactcccccgtcatgtatacttcttaccattgtcacgcgagagccatgctt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32267752 |
aacaaataatgttgaactctgaattttcaggagtgttttggatcgtcctcactcccccgtcatgtatacttcttaccattgtcacgcgagagccatgctt |
32267653 |
T |
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| Q |
207 |
atacatgttttttatcaaaggtatgcatat |
236 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
32267652 |
atacatgttttttatcaaaggtatgcatat |
32267623 |
T |
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