View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2921_low_14 (Length: 234)
Name: NF2921_low_14
Description: NF2921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2921_low_14 |
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Alignment Details
Target: chr6 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 14643866 - 14644069
Alignment:
| Q |
18 |
catgctgagcatcctatgcactcactatcattttttattacnnnnnnnggaataatgtggtgactgatccaaatcatctttattgttaannnnnnnngtc |
117 |
Q |
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| T |
14643866 |
catgctgagcatcctatgcactcactatcattttttattactttttttggaataatgtggtgactgatccaaatcatctttattgttaattttttttgtc |
14643965 |
T |
|
| Q |
118 |
attaaaaactcgaaaaacaactttccctattatatttgatgcatagcgatcgacattacaacctcaaagagggaacataaatagtttagttactttccct |
217 |
Q |
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||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14643966 |
attaacaactcgaaaaacaactttccctattatatttaatgcatagcgatcgacattacaacctcaaagagggaacataaatagtttagttactttccct |
14644065 |
T |
|
| Q |
218 |
ttga |
221 |
Q |
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|||| |
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| T |
14644066 |
ttga |
14644069 |
T |
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