View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2922_low_28 (Length: 244)
Name: NF2922_low_28
Description: NF2922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2922_low_28 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 37767961 - 37768187
Alignment:
| Q |
1 |
cacgggtacccccaaagttctctttgcctattccgcctttagtcatcttttagaagcctcactcactctcacaaccaaattaaattaccttggtcaacaa |
100 |
Q |
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| T |
37767961 |
cacgggtacccccaaagttctctttgcctattccgcctttagtcatcttttagaagcctcactcactctcacaaccaaattaaattaccttggtcaacaa |
37768060 |
T |
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| Q |
101 |
aagagaacaaaacacacgttatttatatattgtttattatggaaagacaaaaacaaaggtactactcataagtgcttgtttgtctaatcaccaaaacaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
37768061 |
aagagaacaaaacacacgttatttatatattgtttattattgaaagacaaaaacaaaggtactactcataagtgcgtgtttgtctaatcaccaaaacaaa |
37768160 |
T |
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| Q |
201 |
atctttgcaggccttaacctcaatatt |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
37768161 |
atctttgcaggccttaacctcaatatt |
37768187 |
T |
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