View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2922_low_7 (Length: 456)
Name: NF2922_low_7
Description: NF2922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2922_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 413; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 19 - 443
Target Start/End: Original strand, 3425259 - 3425683
Alignment:
| Q |
19 |
atattagtggttaaaaagcagcgccattgcggcgctggtgctatcccggtaccgttgtgatttgatgtctgctattgcaattttagggaaaaattctcaa |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
3425259 |
atattagtggttaaaaagcagcgccattgcggcgctggtgctatcccggtaccgttgtgatttgatatctgctattgcaattttagggaaaaattctcaa |
3425358 |
T |
|
| Q |
119 |
aaatcctgttaccgtatctttgagtttgagttctgtcattgttgccttgtattgaccatgaaaataaggaagttagtgtcattcacagagataacttgtg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3425359 |
aaatcctgttaccgtatctttgagtttgagttctgtcattgttgccttgtattgaccatgaaaataaggaagttagtgtcattcacagagataacttgtg |
3425458 |
T |
|
| Q |
219 |
tagcaagttatcttgttagttatccataattaactgtcatagctagaatcttgtatagcgtatctacaatagctatcatacacactcttgtgccctataa |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
3425459 |
tagcaagttatcttgttagttatccataattaactgtcatagctagaatcttgtatagcgtatctacaatagctatcatacacactcttgtgtcctataa |
3425558 |
T |
|
| Q |
319 |
gacaaatatggtatgacttatgagagcctggttatgtcatcattgttctccatccttgctctatttctgtgcaaaagtttgcactgtccatcctttctat |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3425559 |
gacaaatatggtatgacttatgagagcctggttatgtcatcattgttctccatccttgctctatttctgtgcaaaagtttgcactgtccatcctttctat |
3425658 |
T |
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| Q |
419 |
ttctgctcgagttcttttctggttc |
443 |
Q |
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|||||||||||||||||| |||||| |
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| T |
3425659 |
ttctgctcgagttcttttttggttc |
3425683 |
T |
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