View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2923_high_29 (Length: 241)
Name: NF2923_high_29
Description: NF2923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2923_high_29 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 7098843 - 7099072
Alignment:
| Q |
16 |
aataacctatttgaaacccaaattaagagcacatttgatgccaattataagcatgggaattttaagcataaattacaaatgatatcttcactgaacttgt |
115 |
Q |
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| T |
7098843 |
aataacctatttgaaacccaaattaagagcacatttgatgccaattataagcataggaattttaagcataaattacaaatgatatcttcactgaacttgt |
7098942 |
T |
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| Q |
116 |
cattagagaagaattagcacaaaacatgacaagaccaaagccagcaaaagagtcaattacaatnnnnnnnncaaagtctataact----atcaaagttga |
211 |
Q |
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| T |
7098943 |
cattagagaagaattagcacaagacatgacaagaccaaagccagcaaaagagtcaattacaataaaaaaaacaaagtctataactatcaatcaaagttga |
7099042 |
T |
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| Q |
212 |
taacatggtcagaaatcatgcgggaaaacc |
241 |
Q |
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| T |
7099043 |
taacatggtcagaaatcatgcgggaaaacc |
7099072 |
T |
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