View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2923_low_1 (Length: 869)

Name: NF2923_low_1
Description: NF2923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2923_low_1
NF2923_low_1
[»] chr1 (76 HSPs)
chr1 (19-452)||(7090916-7091343)
chr1 (703-835)||(26594980-26595112)
chr1 (703-835)||(29568004-29568136)
chr1 (702-835)||(8989549-8989682)
chr1 (713-834)||(8894936-8895057)
chr1 (713-835)||(18794463-18794585)
chr1 (703-828)||(5094-5218)
chr1 (714-835)||(44556991-44557112)
chr1 (703-835)||(25560783-25560915)
chr1 (744-835)||(31699241-31699332)
chr1 (739-829)||(16757145-16757235)
chr1 (736-835)||(28538313-28538412)
chr1 (751-835)||(7191165-7191249)
chr1 (714-835)||(46270945-46271066)
chr1 (751-835)||(49900715-49900799)
chr1 (714-834)||(2610758-2610874)
chr1 (764-835)||(27209097-27209168)
chr1 (708-826)||(14373339-14373457)
chr1 (733-835)||(5225770-5225868)
chr1 (703-826)||(12484549-12484672)
chr1 (703-826)||(26352002-26352125)
chr1 (703-826)||(34032001-34032124)
chr1 (788-835)||(49468706-49468753)
chr1 (713-835)||(38947703-38947823)
chr1 (789-835)||(46286814-46286860)
chr1 (702-820)||(50249423-50249541)
chr1 (788-835)||(5463684-5463731)
chr1 (788-835)||(15823143-15823190)
chr1 (788-835)||(31798699-31798746)
chr1 (788-835)||(32806933-32806980)
chr1 (788-835)||(38530834-38530881)
chr1 (788-835)||(44108710-44108757)
chr1 (788-835)||(48009119-48009166)
chr1 (788-835)||(50094339-50094386)
chr1 (714-764)||(7190978-7191028)
chr1 (703-825)||(8565872-8565992)
chr1 (758-820)||(33694388-33694450)
chr1 (706-803)||(34047157-34047254)
chr1 (788-834)||(49426414-49426460)
chr1 (737-835)||(51244780-51244878)
chr1 (788-834)||(52125131-52125177)
chr1 (702-827)||(30293442-30293567)
chr1 (703-826)||(14593268-14593389)
chr1 (795-835)||(34110636-34110676)
chr1 (728-804)||(39125732-39125808)
chr1 (788-835)||(10842889-10842936)
chr1 (788-835)||(15573722-15573769)
chr1 (788-835)||(24611514-24611561)
chr1 (788-835)||(31491765-31491812)
chr1 (702-821)||(44938492-44938610)
chr1 (740-826)||(52023931-52024017)
chr1 (714-835)||(14607513-14607632)
chr1 (788-834)||(52066285-52066331)
chr1 (794-835)||(9915552-9915593)
chr1 (703-768)||(28410729-28410794)
chr1 (763-835)||(9092700-9092772)
chr1 (703-826)||(27721180-27721303)
chr1 (788-835)||(1740635-1740682)
chr1 (740-826)||(12591040-12591126)
chr1 (703-770)||(27209538-27209605)
chr1 (735-826)||(44257634-44257725)
chr1 (788-835)||(46046082-46046129)
chr1 (788-835)||(48025249-48025296)
chr1 (713-835)||(11799569-11799691)
chr1 (788-829)||(35847931-35847972)
chr1 (772-828)||(11449678-11449734)
chr1 (788-835)||(25151918-25151966)
chr1 (708-784)||(52707001-52707077)
chr1 (788-835)||(43759441-43759488)
chr1 (788-834)||(7214034-7214080)
chr1 (703-761)||(13579424-13579482)
chr1 (703-761)||(27124100-27124158)
chr1 (772-814)||(28562974-28563016)
chr1 (756-814)||(33622322-33622380)
chr1 (714-756)||(48920411-48920453)
chr1 (737-802)||(14622-14687)
[»] chr3 (62 HSPs)
chr3 (702-835)||(30315418-30315551)
chr3 (703-835)||(36844652-36844784)
chr3 (713-835)||(38141058-38141180)
chr3 (702-835)||(42072093-42072226)
chr3 (714-835)||(7230815-7230936)
chr3 (744-835)||(19373694-19373785)
chr3 (702-835)||(27067715-27067840)
chr3 (702-835)||(3985959-3986090)
chr3 (733-835)||(8817249-8817351)
chr3 (713-826)||(47823338-47823449)
chr3 (713-835)||(48903394-48903516)
chr3 (703-835)||(30934718-30934851)
chr3 (738-835)||(9189379-9189477)
chr3 (739-828)||(40487943-40488032)
chr3 (702-826)||(42886856-42886980)
chr3 (704-807)||(50646052-50646155)
chr3 (701-826)||(45460773-45460900)
chr3 (713-793)||(48901857-48901937)
chr3 (718-821)||(11337547-11337650)
chr3 (788-835)||(39359029-39359076)
chr3 (788-835)||(44676330-44676377)
chr3 (702-826)||(4759397-4759521)
chr3 (735-826)||(44064407-44064498)
chr3 (788-835)||(23525310-23525357)
chr3 (788-835)||(36460914-36460961)
chr3 (788-835)||(38016483-38016530)
chr3 (772-835)||(40717649-40717711)
chr3 (788-835)||(41287490-41287537)
chr3 (703-826)||(42571449-42571572)
chr3 (788-835)||(45566908-45566955)
chr3 (713-791)||(31190629-31190706)
chr3 (790-835)||(50088312-50088357)
chr3 (737-821)||(30680767-30680850)
chr3 (788-835)||(2458117-2458164)
chr3 (788-835)||(13756867-13756914)
chr3 (737-792)||(22857207-22857262)
chr3 (788-831)||(30426317-30426360)
chr3 (788-835)||(31853556-31853603)
chr3 (788-835)||(33194025-33194072)
chr3 (788-827)||(36729766-36729805)
chr3 (788-835)||(41850491-41850537)
chr3 (788-835)||(45213716-45213763)
chr3 (788-835)||(47138074-47138121)
chr3 (788-835)||(47895338-47895385)
chr3 (788-835)||(51398119-51398166)
chr3 (719-769)||(40717298-40717348)
chr3 (745-826)||(19115493-19115574)
chr3 (703-826)||(50038092-50038214)
chr3 (788-833)||(53200675-53200720)
chr3 (788-832)||(30431232-30431276)
chr3 (788-835)||(38363900-38363947)
chr3 (749-814)||(4392612-4392675)
chr3 (702-760)||(19897471-19897529)
chr3 (788-834)||(36381366-36381412)
chr3 (785-835)||(50346733-50346783)
chr3 (705-761)||(46160850-46160906)
chr3 (788-835)||(11393654-11393701)
chr3 (788-835)||(33024294-33024341)
chr3 (800-835)||(35557764-35557799)
chr3 (788-834)||(39168816-39168862)
chr3 (706-768)||(48169613-48169675)
chr3 (784-825)||(54403267-54403308)
[»] chr8 (45 HSPs)
chr8 (713-835)||(9812281-9812403)
chr8 (718-835)||(15750257-15750374)
chr8 (735-834)||(34796626-34796725)
chr8 (713-835)||(40399800-40399922)
chr8 (719-835)||(15227678-15227794)
chr8 (708-835)||(43969970-43970096)
chr8 (750-828)||(13496353-13496431)
chr8 (702-835)||(34156643-34156776)
chr8 (713-835)||(41679420-41679539)
chr8 (702-835)||(13367862-13367993)
chr8 (703-835)||(29312105-29312235)
chr8 (713-833)||(5295329-5295448)
chr8 (713-835)||(6374521-6374641)
chr8 (737-835)||(2375793-2375891)
chr8 (713-834)||(6115927-6116055)
chr8 (736-835)||(14234161-14234260)
chr8 (737-835)||(42179203-42179301)
chr8 (703-835)||(31233857-31233984)
chr8 (770-832)||(514988-515050)
chr8 (702-826)||(396136-396260)
chr8 (697-826)||(15160363-15160492)
chr8 (702-826)||(39765782-39765906)
chr8 (788-835)||(4760556-4760603)
chr8 (718-832)||(12339825-12339937)
chr8 (788-835)||(39698663-39698710)
chr8 (788-835)||(40228683-40228730)
chr8 (703-792)||(515053-515142)
chr8 (788-835)||(17921066-17921113)
chr8 (788-835)||(31899245-31899292)
chr8 (788-835)||(36669791-36669838)
chr8 (788-835)||(43448825-43448872)
chr8 (703-821)||(24245130-24245248)
chr8 (718-788)||(33746067-33746137)
chr8 (788-832)||(5790643-5790687)
chr8 (788-835)||(29025746-29025793)
chr8 (788-835)||(43084624-43084671)
chr8 (781-835)||(45358885-45358939)
chr8 (788-828)||(9304631-9304671)
chr8 (788-835)||(4989587-4989634)
chr8 (788-835)||(7839567-7839614)
chr8 (788-835)||(9880498-9880545)
chr8 (788-835)||(39463367-39463413)
chr8 (790-835)||(44713643-44713688)
chr8 (706-768)||(22699574-22699636)
chr8 (738-835)||(1511599-1511696)
[»] chr7 (65 HSPs)
chr7 (713-835)||(28289323-28289445)
chr7 (718-835)||(34012565-34012682)
chr7 (703-803)||(4268872-4268972)
chr7 (714-835)||(48843661-48843784)
chr7 (733-835)||(40753371-40753472)
chr7 (744-835)||(40339567-40339658)
chr7 (713-835)||(6563339-6563461)
chr7 (702-835)||(47461285-47461417)
chr7 (720-835)||(45499751-45499867)
chr7 (703-819)||(42286022-42286138)
chr7 (733-803)||(4268793-4268863)
chr7 (757-835)||(21819391-21819469)
chr7 (718-835)||(37490896-37491012)
chr7 (703-835)||(25055890-25056020)
chr7 (750-835)||(29636184-29636269)
chr7 (702-827)||(7335397-7335518)
chr7 (737-835)||(19303339-19303437)
chr7 (733-827)||(10476252-10476350)
chr7 (702-795)||(30312683-30312776)
chr7 (772-835)||(21752091-21752154)
chr7 (733-835)||(24780259-24780361)
chr7 (703-826)||(18292442-18292565)
chr7 (713-826)||(12983075-12983188)
chr7 (702-826)||(6747333-6747457)
chr7 (739-835)||(19104948-19105044)
chr7 (788-835)||(1742100-1742147)
chr7 (718-832)||(8292994-8293108)
chr7 (788-835)||(10599472-10599519)
chr7 (788-835)||(13405122-13405169)
chr7 (788-835)||(22298105-22298152)
chr7 (703-826)||(34274901-34275024)
chr7 (724-835)||(47187760-47187871)
chr7 (788-834)||(23155457-23155503)
chr7 (702-826)||(2297150-2297274)
chr7 (713-826)||(12977617-12977730)
chr7 (788-835)||(35777928-35777975)
chr7 (788-835)||(37815833-37815880)
chr7 (751-835)||(24133091-24133173)
chr7 (773-835)||(33939714-33939776)
chr7 (701-826)||(37502426-37502551)
chr7 (788-834)||(44453243-44453289)
chr7 (703-826)||(715784-715907)
chr7 (788-835)||(23935530-23935577)
chr7 (788-835)||(24680237-24680284)
chr7 (788-835)||(27947496-27947543)
chr7 (788-835)||(42879929-42879976)
chr7 (788-835)||(45948625-45948672)
chr7 (713-826)||(18270685-18270798)
chr7 (713-813)||(25086817-25086918)
chr7 (788-828)||(7795238-7795278)
chr7 (747-826)||(31883891-31883970)
chr7 (760-835)||(1031263-1031338)
chr7 (702-760)||(40800334-40800392)
chr7 (788-834)||(45933584-45933630)
chr7 (733-821)||(35778636-35778724)
chr7 (788-835)||(27935876-27935923)
chr7 (788-827)||(29530930-29530969)
chr7 (788-835)||(31418508-31418555)
chr7 (788-835)||(41137838-41137884)
chr7 (788-835)||(48684832-48684879)
chr7 (736-770)||(4268746-4268780)
chr7 (793-835)||(7759368-7759410)
chr7 (702-826)||(31929779-31929904)
chr7 (742-826)||(44567002-44567085)
chr7 (785-826)||(7900046-7900087)
[»] chr2 (74 HSPs)
chr2 (706-835)||(37038685-37038814)
chr2 (703-835)||(11188162-11188294)
chr2 (703-835)||(33055999-33056131)
chr2 (713-835)||(8540147-8540269)
chr2 (737-835)||(4658178-4658276)
chr2 (739-835)||(27964175-27964269)
chr2 (715-835)||(10195783-10195903)
chr2 (713-835)||(7872701-7872821)
chr2 (733-835)||(19164465-19164564)
chr2 (702-814)||(29412113-29412225)
chr2 (737-835)||(11132659-11132755)
chr2 (703-790)||(43971929-43972016)
chr2 (706-808)||(44712148-44712251)
chr2 (705-826)||(36685656-36685777)
chr2 (719-825)||(14833687-14833794)
chr2 (779-834)||(27726408-27726463)
chr2 (703-817)||(15083081-15083191)
chr2 (775-835)||(18719417-18719477)
chr2 (703-835)||(40608519-40608650)
chr2 (703-813)||(9391505-9391616)
chr2 (703-826)||(14286038-14286160)
chr2 (733-835)||(18579275-18579375)
chr2 (788-835)||(29396677-29396724)
chr2 (788-835)||(29808922-29808969)
chr2 (788-835)||(30855214-30855261)
chr2 (702-826)||(16792593-16792716)
chr2 (786-835)||(43971597-43971646)
chr2 (738-798)||(4469591-4469650)
chr2 (751-835)||(34455800-34455884)
chr2 (788-835)||(441228-441275)
chr2 (788-835)||(1423300-1423347)
chr2 (788-835)||(4288708-4288755)
chr2 (788-835)||(8774161-8774208)
chr2 (788-835)||(8789427-8789474)
chr2 (714-825)||(9366100-9366209)
chr2 (788-835)||(12342202-12342249)
chr2 (788-835)||(12393916-12393963)
chr2 (788-835)||(32228008-32228055)
chr2 (788-835)||(38926715-38926762)
chr2 (788-835)||(45081897-45081944)
chr2 (703-826)||(45423725-45423848)
chr2 (788-834)||(6220401-6220447)
chr2 (788-833)||(4133133-4133178)
chr2 (713-770)||(12565393-12565450)
chr2 (702-763)||(35799396-35799457)
chr2 (714-826)||(27986145-27986257)
chr2 (714-826)||(28072677-28072789)
chr2 (788-835)||(19636617-19636664)
chr2 (788-835)||(19835210-19835257)
chr2 (788-835)||(25383482-25383529)
chr2 (788-835)||(34546145-34546192)
chr2 (788-834)||(13562104-13562150)
chr2 (788-834)||(18717186-18717232)
chr2 (703-763)||(681679-681739)
chr2 (791-835)||(43480870-43480914)
chr2 (735-826)||(45301872-45301961)
chr2 (764-835)||(12565954-12566025)
chr2 (788-835)||(16807514-16807561)
chr2 (788-835)||(16846795-16846842)
chr2 (703-826)||(17695748-17695871)
chr2 (788-835)||(42743137-42743184)
chr2 (757-835)||(19469634-19469712)
chr2 (792-834)||(27726542-27726584)
chr2 (718-819)||(32022838-32022939)
chr2 (783-833)||(33482222-33482272)
chr2 (788-834)||(36106400-36106446)
chr2 (788-834)||(42753857-42753903)
chr2 (713-826)||(43427221-43427333)
chr2 (719-770)||(777883-777934)
chr2 (788-827)||(42005007-42005046)
chr2 (702-826)||(5717619-5717743)
chr2 (713-779)||(7644724-7644792)
chr2 (740-805)||(22620294-22620359)
chr2 (785-826)||(35799309-35799350)
[»] chr6 (36 HSPs)
chr6 (703-835)||(13011260-13011392)
chr6 (702-835)||(3988656-3988788)
chr6 (702-835)||(12459230-12459363)
chr6 (703-835)||(21271315-21271447)
chr6 (733-835)||(17828391-17828493)
chr6 (718-835)||(20226148-20226265)
chr6 (718-835)||(22120132-22120249)
chr6 (700-834)||(1502662-1502796)
chr6 (713-835)||(13503766-13503887)
chr6 (703-835)||(8957876-8958010)
chr6 (703-835)||(8961347-8961481)
chr6 (713-835)||(17552169-17552291)
chr6 (744-835)||(9940756-9940847)
chr6 (713-826)||(32193927-32194039)
chr6 (744-835)||(577170-577261)
chr6 (713-835)||(32619747-32619869)
chr6 (713-835)||(3847760-3847882)
chr6 (713-835)||(18737010-18737132)
chr6 (749-834)||(12588634-12588719)
chr6 (713-826)||(4850428-4850541)
chr6 (703-835)||(31233534-31233667)
chr6 (788-835)||(234143-234190)
chr6 (703-826)||(32429394-32429517)
chr6 (737-835)||(16127956-16128051)
chr6 (788-835)||(19675087-19675134)
chr6 (788-835)||(1135034-1135081)
chr6 (703-826)||(29400052-29400175)
chr6 (788-835)||(31443442-31443489)
chr6 (788-834)||(24555924-24555970)
chr6 (772-827)||(12322865-12322920)
chr6 (788-835)||(23259322-23259369)
chr6 (788-835)||(24163711-24163758)
chr6 (796-835)||(10540481-10540520)
chr6 (738-817)||(13597901-13597980)
chr6 (788-835)||(29713403-29713450)
chr6 (788-834)||(10520387-10520433)
[»] chr4 (64 HSPs)
chr4 (703-835)||(47817847-47817979)
chr4 (706-835)||(19451124-19451253)
chr4 (703-834)||(44061103-44061234)
chr4 (707-835)||(30261367-30261495)
chr4 (703-835)||(34413463-34413595)
chr4 (715-833)||(10573082-10573201)
chr4 (713-835)||(6991189-6991311)
chr4 (733-835)||(47458333-47458435)
chr4 (714-827)||(41496321-41496434)
chr4 (718-835)||(50203182-50203299)
chr4 (706-835)||(52162212-52162341)
chr4 (702-826)||(7905922-7906046)
chr4 (713-835)||(45839746-45839865)
chr4 (737-831)||(11364338-11364432)
chr4 (702-835)||(36558217-36558348)
chr4 (733-835)||(44650996-44651098)
chr4 (702-834)||(620091-620223)
chr4 (733-835)||(44868199-44868300)
chr4 (739-835)||(30779977-30780068)
chr4 (703-826)||(4505443-4505566)
chr4 (788-835)||(19878757-19878804)
chr4 (788-835)||(24940989-24941036)
chr4 (788-835)||(29370712-29370759)
chr4 (788-835)||(45043589-45043636)
chr4 (751-826)||(46392028-46392102)
chr4 (788-835)||(52957791-52957838)
chr4 (702-826)||(37624663-37624787)
chr4 (788-835)||(2728399-2728446)
chr4 (788-835)||(20448148-20448195)
chr4 (788-835)||(34316331-34316378)
chr4 (788-835)||(40345348-40345395)
chr4 (788-835)||(41920310-41920357)
chr4 (788-835)||(42605681-42605728)
chr4 (788-835)||(49089572-49089619)
chr4 (788-835)||(50623193-50623240)
chr4 (788-835)||(52253957-52254004)
chr4 (788-835)||(52848055-52848102)
chr4 (781-835)||(8971151-8971205)
chr4 (739-835)||(19903162-19903251)
chr4 (752-834)||(56460195-56460277)
chr4 (713-826)||(22220296-22220409)
chr4 (713-826)||(51733432-51733544)
chr4 (788-835)||(37654518-37654566)
chr4 (788-835)||(1819671-1819718)
chr4 (788-835)||(2493211-2493258)
chr4 (788-835)||(19930823-19930870)
chr4 (788-835)||(27653783-27653830)
chr4 (788-835)||(28734707-28734754)
chr4 (788-835)||(44571866-44571913)
chr4 (788-835)||(49080478-49080525)
chr4 (788-835)||(53814498-53814545)
chr4 (788-835)||(54042184-54042231)
chr4 (702-802)||(38510171-38510271)
chr4 (788-835)||(18430098-18430145)
chr4 (703-766)||(24157299-24157362)
chr4 (788-835)||(39984926-39984973)
chr4 (788-835)||(56373576-56373623)
chr4 (749-814)||(18052650-18052713)
chr4 (733-811)||(25123569-25123647)
chr4 (735-820)||(25231288-25231373)
chr4 (788-831)||(38991764-38991805)
chr4 (735-802)||(28308857-28308924)
chr4 (788-835)||(29519526-29519573)
chr4 (708-826)||(52915474-52915592)
[»] chr5 (54 HSPs)
chr5 (696-835)||(11977696-11977835)
chr5 (713-835)||(13974382-13974504)
chr5 (703-835)||(21634219-21634351)
chr5 (703-835)||(21642466-21642598)
chr5 (713-835)||(34534467-34534589)
chr5 (702-835)||(843126-843259)
chr5 (704-835)||(4911023-4911159)
chr5 (702-835)||(14161811-14161945)
chr5 (712-833)||(38369982-38370103)
chr5 (703-835)||(1309271-1309403)
chr5 (714-835)||(27797886-27798005)
chr5 (703-835)||(7736482-7736615)
chr5 (713-835)||(36164995-36165115)
chr5 (713-835)||(28591547-28591671)
chr5 (713-835)||(7721203-7721318)
chr5 (713-835)||(15166935-15167056)
chr5 (749-834)||(11195184-11195269)
chr5 (702-826)||(10344854-10344978)
chr5 (714-835)||(7579523-7579638)
chr5 (713-834)||(27557743-27557863)
chr5 (702-826)||(32158649-32158773)
chr5 (733-814)||(34381743-34381820)
chr5 (788-835)||(2729783-2729830)
chr5 (788-835)||(34446024-34446071)
chr5 (788-835)||(39335200-39335247)
chr5 (788-835)||(42978070-42978117)
chr5 (788-834)||(21319309-21319355)
chr5 (733-835)||(41645344-41645446)
chr5 (703-835)||(38362052-38362182)
chr5 (787-835)||(14006001-14006049)
chr5 (788-835)||(8336404-8336451)
chr5 (788-835)||(39566292-39566339)
chr5 (788-835)||(39730055-39730102)
chr5 (788-834)||(27600504-27600550)
chr5 (788-835)||(3306006-3306053)
chr5 (788-835)||(6519086-6519133)
chr5 (788-835)||(21375647-21375694)
chr5 (788-835)||(26660863-26660910)
chr5 (788-835)||(26932456-26932503)
chr5 (788-827)||(29807311-29807350)
chr5 (788-835)||(42104060-42104107)
chr5 (788-835)||(42661937-42661984)
chr5 (702-820)||(43584298-43584416)
chr5 (740-817)||(9065611-9065687)
chr5 (784-835)||(7748891-7748942)
chr5 (788-835)||(13761829-13761876)
chr5 (735-818)||(25362755-25362838)
chr5 (788-835)||(34972647-34972694)
chr5 (788-835)||(39504834-39504881)
chr5 (735-826)||(35765853-35765946)
chr5 (703-779)||(4631084-4631160)
chr5 (788-835)||(4425083-4425130)
chr5 (751-826)||(7317135-7317210)
chr5 (788-835)||(14620491-14620538)
[»] scaffold0565 (2 HSPs)
scaffold0565 (702-835)||(9866-9999)
scaffold0565 (788-835)||(9639-9686)
[»] scaffold0300 (1 HSPs)
scaffold0300 (713-835)||(4673-4793)
[»] scaffold0136 (1 HSPs)
scaffold0136 (710-835)||(9653-9775)
[»] scaffold0026 (1 HSPs)
scaffold0026 (702-835)||(4249-4382)
[»] scaffold0983 (1 HSPs)
scaffold0983 (718-835)||(615-731)
[»] scaffold0332 (1 HSPs)
scaffold0332 (703-826)||(3733-3856)
[»] scaffold0182 (1 HSPs)
scaffold0182 (772-835)||(18236-18299)
[»] scaffold0015 (1 HSPs)
scaffold0015 (788-834)||(21078-21124)
[»] scaffold0294 (1 HSPs)
scaffold0294 (788-835)||(3501-3548)
[»] scaffold0110 (1 HSPs)
scaffold0110 (788-835)||(24737-24784)
[»] scaffold0048 (1 HSPs)
scaffold0048 (788-835)||(62742-62789)
[»] scaffold0502 (1 HSPs)
scaffold0502 (772-834)||(553-615)
[»] scaffold0010 (1 HSPs)
scaffold0010 (733-821)||(153429-153517)


Alignment Details
Target: chr1 (Bit Score: 249; Significance: 1e-138; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 19 - 452
Target Start/End: Original strand, 7090916 - 7091343
Alignment:
Q  19 gttgaggtttgtgaggttta--ggttactacaacaaagttttaaactttcaaaacaaagcttgtggaataaaactaaaa-ctggaaaaatgagcatcaca 115  Q
    ||||||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  7090916 gttgaggtttgtgaggtctataggttactacaacaaagttttacactttcaaaacaaagcttgtggaataaaactaaaaactagaaaaatgagcatcaca 7091015  T
Q  116 tactcatgcacnnnnnnnnnnnnnnnnncaaagcatcaagcaaagcatcccttctttacaaccaaaccacatggacagaacaaaacttaatt----tggt 211  Q
    |||||||||||                 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||    
T  7091016 tactcatgcacttttgttttttgtttttcaaagtatcaagcaaagcatcccttctttacaaccaaaccacatggacagaacaaaacttaattaatttggt 7091115  T
Q  212 ctttacatgaacacaactcaaattgtatatgctagcagtttagttttcatctgcatcgctcactcctcccacttgtatcacttgccttaagctataatcc 311  Q
    |||| |||||||| |||||||||||||          |||||||||||||||||||| |||||||||  ||||| ||| |||||||||||||||||||||    
T  7091116 ctttgcatgaacaaaactcaaattgta----------gtttagttttcatctgcatcactcactccttgcacttttattacttgccttaagctataatcc 7091205  T
Q  312 aacacaatatcttgcacaaaaatggtatttaagtgtggtccactttaatggggttaatggtcatcagaccccccatatagaaagatcttcatgatcttgt 411  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||||||    
T  7091206 aacacaatatcttgcgcaaaaatagtatttaagtgtggtccactttaatggggtcaatggtcatcaga---cccatatagaaagatcttcatgatcttgt 7091302  T
Q  412 gttattggttttaaatttttgatataaaatgcatttcctat 452  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7091303 gttattggttttaaatttttgatataaaatgcatttcctat 7091343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 703 - 835
Target Start/End: Original strand, 26594980 - 26595112
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| |||| |||||||||| ||| |||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  26594980 tactccctccgtttcaaaatgaatgtcgtttaaggtttttacacacatattaagaaatacattaattaaaagaaagagagatgttattttaccaaattat 26595079  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||| |||||||||||||||||||||||    
T  26595080 cctaatcaattattggtttgtttttcattaaag 26595112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 703 - 835
Target Start/End: Complemental strand, 29568136 - 29568004
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||||| || |||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  29568136 tactccatccgtttcaaaatgaatgtcgtttaaggtttttacacacatattaagaaatgcattaattaaaagaaagaaatatgttattttaccaaattat 29568037  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
     ||||||||||||||||||||||||||||||||    
T  29568036 tctaatcaactattggtttgtttttcattaaag 29568004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 702 - 835
Target Start/End: Original strand, 8989549 - 8989682
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||||| || || ||||||| |||| ||  ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8989549 atactccatccgtcttaaaataaatgtcgattaaagtttttacacacatattaagaaatgcattaattaaaagaaagaaagatgttattttaccaaatta 8989648  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    |  |||||||||||||||||||||||||||||||    
T  8989649 ttataatcaactattggtttgtttttcattaaag 8989682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 713 - 834
Target Start/End: Original strand, 8894936 - 8895057
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||||||||||| || ||| |||| |||||| | |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  8894936 gttttaaaatgagtgtcgtttaagatttttatatacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaaattatcctaatcaac 8895035  T
Q  813 tattggtttgtttttcattaaa 834  Q
    ||||| ||||||||||||||||    
T  8895036 tattgatttgtttttcattaaa 8895057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 713 - 835
Target Start/End: Original strand, 18794463 - 18794585
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    ||||||||||||||| ||| |||  |||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  18794463 gttttaaaatgaatgtcgtttaatatttttacacacatattaataaatgcattaattaaaagaaagaaatatgttattttaccaaattattctaatcaac 18794562  T
Q  813 tattggtttgtttttcattaaag 835  Q
    |||| ||||||||| ||||||||    
T  18794563 tattagtttgttttccattaaag 18794585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 703 - 828
Target Start/End: Complemental strand, 5218 - 5094
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| ||||||||||||||| | | | |||||||||||||||| |||| |||||||||||||  |||||||| ||||||||||||||||||||||    
T  5218 tactccctccgttttaaaatgaatgtcatttgaggtttttacacacat-ttaataaatgcattaatttaaagaaagatagatgttattttaccaaattat 5120  T
Q  803 cctaatcaactattggtttgtttttc 828  Q
    ||||||||||||||||||||||||||    
T  5119 cctaatcaactattggtttgtttttc 5094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 714 - 835
Target Start/End: Original strand, 44556991 - 44557112
Alignment:
Q  714 ttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaact 813  Q
    |||||||||||||| ||| ||||||||||| ||||||||||| |||||||||||||| |||||||| | ||||||||||||||||||||| |||| ||||    
T  44556991 ttttaaaatgaatgtcgtttaaggtttttatacacatattaaaaaatgcattaattaaaagaaagagaaatgttattttaccaaattatcttaataaact 44557090  T
Q  814 attggtttgtttttcattaaag 835  Q
     |||||||||||||||||||||    
T  44557091 gttggtttgtttttcattaaag 44557112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 703 - 835
Target Start/End: Original strand, 25560783 - 25560915
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||||||||  ||| |||||||||| ||| ||  ||||||||||| |||||||||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  25560783 tactccctctatttcaaaatgaatgtcgtttagagtttttacacatatattaagaaatacattaattaaaagaaagagagatgttattttaccaaattat 25560882  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
    | |||||||||||| ||||||||||||||||||    
T  25560883 cataatcaactattagtttgtttttcattaaag 25560915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 744 - 835
Target Start/End: Original strand, 31699241 - 31699332
Alignment:
Q  744 cacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31699241 cacacatattaagaaacacattaattaaaagaaagagagatgttattttaccaaattatcataatcaactattggtttgtttttcattaaag 31699332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 739 - 829
Target Start/End: Original strand, 16757145 - 16757235
Alignment:
Q  739 ttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttca 829  Q
    |||||||||||||||||||||| ||||||||| |||||||| | |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  16757145 ttttacacacatattaagaaatacattaattaaaagaaagagaaatgttattttaccaaactatcctaatcaactattagtttgtttttca 16757235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 736 - 835
Target Start/End: Complemental strand, 28538412 - 28538313
Alignment:
Q  736 ggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| ||||| ||| || |||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  28538412 ggttttcacacatatagtaggaaatgtattaattaaaagaaagagagatgttattttaccaaattatcataatcaactattggtttatttttcattaaag 28538313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 751 - 835
Target Start/End: Original strand, 7191165 - 7191249
Alignment:
Q  751 attaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| ||||||    
T  7191165 attaagaaatgtattaattaaaagaaagagagatgttattttaccaaattatcctaatcaactatttgtttatttttcgttaaag 7191249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 714 - 835
Target Start/End: Original strand, 46270945 - 46271066
Alignment:
Q  714 ttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac- 812  Q
    |||||||||||||| ||| ||| ||||||||| | ||||||| ||||||||||||||||| ||| ||| || ||||||||||| |||||| ||||||||     
T  46270945 ttttaaaatgaatgtcgtttaacgtttttacataaatattaataaatgcattaattacaa-aaaaaaaaatattattttaccagattatcgtaatcaacg 46271043  T
Q  813 tattggtttgtttttcattaaag 835  Q
    |||| ||||||||||||||||||    
T  46271044 tattagtttgtttttcattaaag 46271066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 751 - 835
Target Start/End: Original strand, 49900715 - 49900799
Alignment:
Q  751 attaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||| |||||||| |||||||||| || ||||||||| |||||||||||||||||||||||||| |||||| ||||||    
T  49900715 attaagaaatgtattaattagaagaaagaaatatattattttactaaattatcctaatcaactattggtttatttttctttaaag 49900799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 714 - 834
Target Start/End: Original strand, 2610758 - 2610874
Alignment:
Q  714 ttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaact 813  Q
    |||||||||||||| ||| ||| ||||||| |||||||||||||||| |||||||||    ||| | | ||||||||||||||| ||||||||||||| |    
T  2610758 ttttaaaatgaatgtcgtttaaagtttttatacacatattaagaaattcattaatta----aaaaataaatgttattttaccaagttatcctaatcaatt 2610853  T
Q  814 attggtttgtttttcattaaa 834  Q
     ||||||| ||||||||||||    
T  2610854 gttggtttatttttcattaaa 2610874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 764 - 835
Target Start/End: Complemental strand, 27209168 - 27209097
Alignment:
Q  764 ttaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||| |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27209168 ttaattaaaagaaagagatatgttattttaccaaattatcctaatcaactattgatttgtttttcattaaag 27209097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 708 - 826
Target Start/End: Original strand, 14373339 - 14373457
Alignment:
Q  708 cctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaa 807  Q
    |||| ||||||||||||||| ||| | |||| |||||||||||||||||||||||| | |||| |||||| | |   ||||||||||||||||||||| |    
T  14373339 cctccgttttaaaatgaatgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaaaagaatggttattttaccaaattatcctta 14373438  T
Q  808 tcaactattggtttgtttt 826  Q
    | ||||||||||| |||||    
T  14373439 ttaactattggttagtttt 14373457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 733 - 835
Target Start/End: Original strand, 5225770 - 5225868
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcatta 832  Q
    |||||||||||| |||||||||||||||  |||||||| |||| ||||    ||||||||||||||||||| |||| |||||||||||| ||||||||||    
T  5225770 taaggtttttacgcacatattaagaaatatattaattaaaagagagaa----gttattttaccaaattatcataattaactattggtttatttttcatta 5225865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 703 - 826
Target Start/End: Original strand, 12484549 - 12484672
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| |||  |||||||||| ||| |||||||||||||||||||||||||||| ||   |||| |||||||| |  ||| |||||||||||||||    
T  12484549 tactccctctgttacaaaatgaatgccgtttaaggtttttacacacatattaagaaatacaaagattaaaagaaagataattgtcattttaccaaattat 12484648  T
Q  803 cctaatcaactattggtttgtttt 826  Q
    ||| ||  |||||||||| |||||    
T  12484649 ccttattgactattggttagtttt 12484672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 703 - 826
Target Start/End: Original strand, 26352002 - 26352125
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaatta 801  Q
    |||||| || |||||||||||| || ||| | |||| |||||||||||||||||||||||| | |||| |||||||| | ||| ||||||||||||||||    
T  26352002 tactccatccgttttaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaattattaaaagaaagaga-atgtttattttaccaaatta 26352100  T
Q  802 tcctaatcaactattggtttgtttt 826  Q
    |||| ||  |||||||||| |||||    
T  26352101 tccttattgactattggttagtttt 26352125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 703 - 826
Target Start/End: Original strand, 34032001 - 34032124
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||||| || |||||||||||| || ||| | |||| |||||| ||||||||| ||||||| | |||| |||||||| |   ||||||||||||||||||    
T  34032001 tactccttccgttttaaaatgagtgtcgttttaggtgtttacatacatattaaaaaatgcaatgattaaaagaaagagaatggttattttaccaaattat 34032100  T
Q  803 cctaatcaactattggtttgtttt 826  Q
    ||| || ||||||||||| |||||    
T  34032101 ccttattaactattggttagtttt 34032124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 49468706 - 49468753
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  49468706 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 49468753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 38947823 - 38947703
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||||||||| |||| ||| ||| ||||| |||||| |||||||||||| || ||||| |||||||| |||| |||||||||||||||| | |||| |||    
T  38947823 gttttaaaataaatgtcgtttaatgttttcacacacctattaagaaatgtat-aattaaaagaaagagagatattattttaccaaattaccataattaac 38947725  T
Q  813 tattggtttgtttttcattaaag 835  Q
     |||| ||| |||||||||||||    
T  38947724 cattgattt-tttttcattaaag 38947703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 789 - 835
Target Start/End: Original strand, 46286814 - 46286860
Alignment:
Q  789 ttttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  46286814 ttttaccaaattatcctaatcaactattggtttgtttttcattaaag 46286860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 702 - 820
Target Start/End: Complemental strand, 50249541 - 50249423
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||| |||| |||| ||||||| ||  || | |||| |||||||||||||||||||||||| | |||| |||||||| |   |||||||||||||||||    
T  50249541 atacttcctctgtttcaaaatgagtgttgttttaggtctttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaatta 50249442  T
Q  802 tcctaatcaactattggtt 820  Q
    |||| || |||||||||||    
T  50249441 tccttattaactattggtt 50249423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 5463731 - 5463684
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  5463731 attttaccaaataatcctaatcaactattggtttgtttttcattaaag 5463684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 15823190 - 15823143
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15823190 attttaccaaattatcctaatcaactaatggtttgtttttcattaaag 15823143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 31798746 - 31798699
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  31798746 attttaccaaattatcttaatcaactattggtttgtttttcattaaag 31798699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 32806933 - 32806980
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  32806933 attttaccgaattatcctaatcaactattggtttgtttttcattaaag 32806980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 38530834 - 38530881
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38530834 attttactaaattatcctaatcaactattggtttgtttttcattaaag 38530881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 44108757 - 44108710
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  44108757 attttaccaaattatcctaaacaactattggtttgtttttcattaaag 44108710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 48009166 - 48009119
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  48009166 attttaccaaattatcctaatcaactattggtttgtttttcaataaag 48009119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 50094386 - 50094339
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50094386 attttaccaaattatcctaatcaactattggtttgcttttcattaaag 50094339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 714 - 764
Target Start/End: Original strand, 7190978 - 7191028
Alignment:
Q  714 ttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcat 764  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  7190978 ttttaaaatgaatgtcgtctaatgtttttacacacatattaagaaatgcat 7191028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 703 - 825
Target Start/End: Complemental strand, 8565992 - 8565872
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||| |||| |||| |||||||||| ||| ||||||||||||||||||||||||||||||| ||| || ||| |||| |   || |||||||||||||||    
T  8565992 tactgcctctgtttcaaaatgaatgtcgt-taaggtttttacacacatattaagaaatgcaataaatagaag-aagataatagtaattttaccaaattat 8565895  T
Q  803 cctaatcaactattggtttgttt 825  Q
     || || |||||||||| |||||    
T  8565894 tcttattaactattggtgtgttt 8565872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 758 - 820
Target Start/End: Original strand, 33694388 - 33694450
Alignment:
Q  758 aatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtt 820  Q
    ||||||||||||| || ||||| | |||||||||||||||||||| |||||||||||||||||    
T  33694388 aatgcattaattaaaataaagagatatgttattttaccaaattattctaatcaactattggtt 33694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 706 - 803
Target Start/End: Original strand, 34047157 - 34047254
Alignment:
Q  706 tccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaattatc 803  Q
    |||||| |||||||||||| || ||| | |||| |||||||||||||||||||||||| | |||| |||||||| | ||| ||||||||||||||||||    
T  34047157 tccctccgttttaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaagaga-atgattattttaccaaattatc 34047254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 788 - 834
Target Start/End: Original strand, 49426414 - 49426460
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  49426414 attttaccaaattatcctaatcaactattggtttgttcttcattaaa 49426460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 737 - 835
Target Start/End: Original strand, 51244780 - 51244878
Alignment:
Q  737 gtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||| ||||||| ||||  |||||||| |||||||| | |||||||||||| ||||||||||| ||||  |||| ||| |||||||| ||||    
T  51244780 gtttttacacatatattaaaaaataaattaattaaaagaaagagatatgttattttactaaattatcctagtcaatcattgatttatttttcatcaaag 51244878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 788 - 834
Target Start/End: Original strand, 52125131 - 52125177
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  52125131 attttaccaaattattctaatcaactattggtttgtttttcattaaa 52125177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 702 - 827
Target Start/End: Complemental strand, 30293567 - 30293442
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||||| || |||| |||| || || ||| | |||| |||||||| ||||||||||||||| | |||| |||||||| |   |||||||||||||||||    
T  30293567 atactccatccgtttcaaaacgagtgtcgttttaggtgtttacacatatattaagaaatgcaatgattaaaagaaagataatggttattttaccaaatta 30293468  T
Q  802 tcctaatcaactattggtttgttttt 827  Q
    |||| || || |||||||| ||||||    
T  30293467 tccttattaattattggttagttttt 30293442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 703 - 826
Target Start/End: Original strand, 14593268 - 14593389
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| |||||||||||| ||  || | ||||||||||||  ||||||||||||||| | |||| || ||||| |   ||||||||||||||||||    
T  14593268 tactccctccgttttaaaatgagtgttgttttaggtttttacac--atattaagaaatgcaatgattaaaaaaaagataatggttattttaccaaattat 14593365  T
Q  803 cctaatcaactattggtttgtttt 826  Q
    ||| || ||||||| ||| |||||    
T  14593366 ccttattaactatttgttagtttt 14593389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 795 - 835
Target Start/End: Complemental strand, 34110676 - 34110636
Alignment:
Q  795 caaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34110676 caaattatcctaatcaactattggtttgtttttcattaaag 34110636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 728 - 804
Target Start/End: Complemental strand, 39125808 - 39125732
Alignment:
Q  728 acgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcc 804  Q
    |||| ||||||||||||||||||||||||||||||| | |||| |||||||| |  ||||||||| | |||||||||    
T  39125808 acgtttaaggtttttacacacatattaagaaatgcaatgattaaaagaaagagaattgttatttttctaaattatcc 39125732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 10842936 - 10842889
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  10842936 attttaccaaattatcttaatcaactattagtttgtttttcattaaag 10842889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 15573769 - 15573722
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  15573769 attttaccaaattatcctaattatctattggtttgtttttcattaaag 15573722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 24611514 - 24611561
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||    
T  24611514 attttactaaattaccctaatcaactattggtttgtttttcattaaag 24611561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 31491765 - 31491812
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||    
T  31491765 attttaccaaattatcataatcaactattgatttgtttttcattaaag 31491812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 702 - 821
Target Start/End: Original strand, 44938492 - 44938610
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||| ||||||||| |||||||| | ||| |||| |||||||||||||||||||||||||| | |||| || ||||| |      ||||||||||||||    
T  44938492 atacttcctcagtttcaaaatgaacgtcgtttaagatttttacacacatattaagaaatgcaatgattagaataaagagaataacaattttaccaaatta 44938591  T
Q  802 tcctaatcaactattggttt 821  Q
    |||| ||||||| |||||||    
T  44938592 tcct-atcaactgttggttt 44938610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 740 - 826
Target Start/End: Original strand, 52023931 - 52024017
Alignment:
Q  740 tttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaattatcctaatcaactattggtttgtttt 826  Q
    |||||||||||||||||||||||| | |||| |||||||| | ||| |||||||||||||||||||| || | ||||||||| |||||    
T  52023931 tttacacacatattaagaaatgcaatgattaaaagaaagaga-atgattattttaccaaattatccttattagctattggttagtttt 52024017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 714 - 835
Target Start/End: Complemental strand, 14607632 - 14607513
Alignment:
Q  714 ttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaact 813  Q
    ||||||||| |||  ||| |||| ||||||||||||||||| |||||||||  |||| |||||||||   |||| |||||||||||||| || || || |    
T  14607632 ttttaaaataaatatcgtttaagatttttacacacatattatgaaatgcatggattaaaagaaagaa--ttgttgttttaccaaattattcttattaatt 14607535  T
Q  814 attggtttgtttttcattaaag 835  Q
    |||| ||| ||||||| |||||    
T  14607534 attgatttctttttcaataaag 14607513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 788 - 834
Target Start/End: Original strand, 52066285 - 52066331
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  52066285 attttaccaaattatcttaatcaactattgatttgtttttcattaaa 52066331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 794 - 835
Target Start/End: Complemental strand, 9915593 - 9915552
Alignment:
Q  794 ccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  9915593 ccaaattatcctaatcaactattgatttgtttttcattaaag 9915552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 703 - 768
Target Start/End: Original strand, 28410729 - 28410794
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaat 768  Q
    ||||||||| |||| |||||||||| ||| ||| ||| ||||||||||||||||||||||| ||||    
T  28410729 tactccctccgtttcaaaatgaatgtcgtttaaagttgttacacacatattaagaaatgcaataat 28410794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 763 - 835
Target Start/End: Complemental strand, 9092772 - 9092700
Alignment:
Q  763 attaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||| || ||||| ||||||||||||   ||||||| |||||||| ||||| |||||||||||||||||    
T  9092772 attaattaaaataaagagagatgttattttctaaaattattctaatcaaatattgatttgtttttcattaaag 9092700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 703 - 826
Target Start/End: Complemental strand, 27721303 - 27721180
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaatta 801  Q
    ||||||||| |||||||||||| || |||   || | ||||| |||||||||| ||||||| |||||| |||||||| | ||| |||||||| |||||||    
T  27721303 tactccctccgttttaaaatgagtgtcgttgtagatgtttacgcacatattaaaaaatgcaataattaaaagaaagaga-atgattattttatcaaatta 27721205  T
Q  802 tcctaatcaactattggtttgtttt 826  Q
    |||| || |||||||| || |||||    
T  27721204 tccttattaactattgattagtttt 27721180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 1740635 - 1740682
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| |||||||||||| |||||||||| |||||||    
T  1740635 attttaccaaattatcataatcaactattagtttgttttttattaaag 1740682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 740 - 826
Target Start/End: Original strand, 12591040 - 12591126
Alignment:
Q  740 tttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaattatcctaatcaactattggtttgtttt 826  Q
    ||||||||||| |||||| ||||| | |||| |||||||| | ||| |||||||||||||||||||| || ||||||||||| |||||    
T  12591040 tttacacacatgttaagatatgcaatgattaaaagaaagata-atgattattttaccaaattatccttattaactattggttagtttt 12591126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 703 - 770
Target Start/End: Complemental strand, 27209605 - 27209538
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaatta 770  Q
    |||||||||  ||| ||||||| ||  || ||||||||||||||||||||||| ||||||||||||||    
T  27209605 tactccctccatttcaaaatgagtgttgtttaaggtttttacacacatattaaaaaatgcattaatta 27209538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 735 - 826
Target Start/End: Original strand, 44257634 - 44257725
Alignment:
Q  735 aggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttt 826  Q
    |||| |||||||||||||||| ||||||| | |||| |||||||| |    |||||||||||||||||||| || || |||||||| |||||    
T  44257634 aggtgtttacacacatattaataaatgcaatgattaaaagaaagagaataattattttaccaaattatccttattaattattggttagtttt 44257725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 46046129 - 46046082
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||    
T  46046129 attttaccaaattatcctaatcaactattaatttgattttcattaaag 46046082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 48025249 - 48025296
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  48025249 attttaccaaattatcctaataaactatttgtttgtttttctttaaag 48025296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 11799691 - 11799569
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    ||||||||||||||| ||| |||| ||||   |||||||||||||||  || |  ||| |||||||| |  ||||||||||||| | |||||| || ||     
T  11799691 gttttaaaatgaatgtcgtttaagattttataacacatattaagaaaaacaatgtttaaaagaaagagaattgttattttaccacactatccttattaat 11799592  T
Q  813 tattggtttgtttttcattaaag 835  Q
    ||||| |||||||| ||||||||    
T  11799591 tattgatttgttttccattaaag 11799569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 788 - 829
Target Start/End: Original strand, 35847931 - 35847972
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttca 829  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  35847931 attttaccaaattatcttaatcaactattgatttgtttttca 35847972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 772 - 828
Target Start/End: Original strand, 11449678 - 11449734
Alignment:
Q  772 aagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttc 828  Q
    ||||||||||  ||||||||||||||||||| || || || ||||||||||||||||    
T  11449678 aagaaagaaaattgttattttaccaaattattcttattaattattggtttgtttttc 11449734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 25151966 - 25151918
Alignment:
Q  788 attttaccaaattatcctaatcaactattgg-tttgtttttcattaaag 835  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  25151966 attttaccaaattatactaatcaactattggttttttttttcattaaag 25151918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 708 - 784
Target Start/End: Complemental strand, 52707077 - 52707001
Alignment:
Q  708 cctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagat 784  Q
    |||| ||||||||||||| |  || |||| |||||||||||||||||||||||  ||||| || |||||||| ||||    
T  52707077 cctccgttttaaaatgaacgtggtttaagatttttacacacatattaagaaatatattaactaaaagaaagagagat 52707001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 43759488 - 43759441
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||||||||||||| |||||||| || ||||||||||||||    
T  43759488 attttatcaaattatcctaattaactattgattggtttttcattaaag 43759441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 788 - 834
Target Start/End: Original strand, 7214034 - 7214080
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||    
T  7214034 attttaccaaattattctaatcaactatttatttgtttttaattaaa 7214080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 703 - 761
Target Start/End: Original strand, 13579424 - 13579482
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatg 761  Q
    ||||||||| | || |||| ||||| ||| ||||||| |||||||||||||||||||||    
T  13579424 tactccctccgcttcaaaacgaatgtcgtttaaggttgttacacacatattaagaaatg 13579482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 703 - 761
Target Start/End: Complemental strand, 27124158 - 27124100
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatg 761  Q
    |||||| || |||||||||||||||  || ||||||||||||| ||| |||||||||||    
T  27124158 tactccatccgttttaaaatgaatgttgtttaaggtttttacatacaaattaagaaatg 27124100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 772 - 814
Target Start/End: Complemental strand, 28563016 - 28562974
Alignment:
Q  772 aagaaagaaagatgttattttaccaaattatcctaatcaacta 814  Q
    |||||||| | |||||||||||||||||||| |||||||||||    
T  28563016 aagaaagagatatgttattttaccaaattattctaatcaacta 28562974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 756 - 814
Target Start/End: Original strand, 33622322 - 33622380
Alignment:
Q  756 gaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaacta 814  Q
    ||||| || |||||| |||||||| | ||||||||||| ||||||||| ||||||||||    
T  33622322 gaaatacactaattaaaagaaagagatatgttattttatcaaattatcttaatcaacta 33622380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 714 - 756
Target Start/End: Complemental strand, 48920453 - 48920411
Alignment:
Q  714 ttttaaaatgaatgacgtctaaggtttttacacacatattaag 756  Q
    |||||||||||||| ||| |||| |||||||||||||||||||    
T  48920453 ttttaaaatgaatgtcgtttaagatttttacacacatattaag 48920411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 737 - 802
Target Start/End: Original strand, 14622 - 14687
Alignment:
Q  737 gtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||||||||||||| ||||||| | |||| ||||||||||   ||  ||||||||||||||    
T  14622 gtttttacacacatattaaaaaatgcaatgattagaagaaagaaaatagtagttttaccaaattat 14687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 8e-48; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 702 - 835
Target Start/End: Complemental strand, 30315551 - 30315418
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    |||||||||| |||| |||||||||| ||| ||||| | ||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  30315551 atactccctccgtttcaaaatgaatgtcgtttaaggctgttacacacatattaagaaatgcattaattaagagaaagagagatgttattttaccaaatta 30315452  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||    
T  30315451 tcctaatcaactattggtttgtttttcattaaag 30315418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 703 - 835
Target Start/End: Original strand, 36844652 - 36844784
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| |||| |||||||||| ||| ||||||||||| ||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||    
T  36844652 tactccctccgtttcaaaatgaatgtcgtttaaggtttttagacacatattaagaaatgcattaattaacagaaagagagatattattttaccaaattat 36844751  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||| || ||||||||||||||    
T  36844752 cctaatcaactattgattagtttttcattaaag 36844784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 38141180 - 38141058
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    ||||||||||||||| ||| ||| ||||||||| | ||||||| ||||| |||||||| |||||| | |||||||||||||||||||||| ||||||||     
T  38141180 gttttaaaatgaatgtcgtataaagtttttacatatatattaaaaaatgtattaattaaaagaaatagagatgttattttaccaaattattctaatcaat 38141081  T
Q  813 tattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||    
T  38141080 tattggtttgtttttcattaaag 38141058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 702 - 835
Target Start/End: Complemental strand, 42072226 - 42072093
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||| |||| |||| |||||||||| ||| ||| ||||||||||||||||||||||||  |||||||| |||||||| | |||||||||||| ||||||    
T  42072226 atacttcctccgtttcaaaatgaatgtcgtataatgtttttacacacatattaagaaatatattaattaaaagaaagagatatgttattttactaaatta 42072127  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    || ||||||||||||| |||||||| ||||||||    
T  42072126 tcataatcaactattgatttgttttccattaaag 42072093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 714 - 835
Target Start/End: Original strand, 7230815 - 7230936
Alignment:
Q  714 ttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaact 813  Q
    |||||||||||||| ||| |||| |||||||||||||||||||||||| |||||| | || ||||| ||||| |||||||  ||||||||||||||||||    
T  7230815 ttttaaaatgaatgtcgtttaagatttttacacacatattaagaaatgaattaataaaaataaagagagatgatattttagtaaattatcctaatcaact 7230914  T
Q  814 attggtttgtttttcattaaag 835  Q
    |||||||| ||| |||||||||    
T  7230915 attggtttctttctcattaaag 7230936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 744 - 835
Target Start/End: Complemental strand, 19373785 - 19373694
Alignment:
Q  744 cacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| ||||||| |||||||| ||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19373785 cacacagattaagagatgcattagttaaaagaaagagagatgttattttaccaaattctcctaatcaactattggtttgtttttcattaaag 19373694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 702 - 835
Target Start/End: Complemental strand, 27067840 - 27067715
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||||| || |||||||||||| || ||| ||||||||||||||||||  |||||||||||||||||| ||     |||||||||| ||||||||||||    
T  27067840 atactccttccgttttaaaatgagtgtcgtttaaggtttttacacacat--taagaaatgcattaattaaaa-----aaagatgttaatttaccaaatta 27067748  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||| ||||||||||||    
T  27067747 tcctaatcaactattggtttg-ttttcattaaag 27067715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 702 - 835
Target Start/End: Complemental strand, 3986090 - 3985959
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||||| ||||||| |||||||||| ||| ||||||||||||||||||  ||||||||||| | |||| |||||||| |  | ||||||||||||||||    
T  3986090 atactccttcagtttcaaaatgaatgtcgtttaaggtttttacacacat--taagaaatgcaatgattaaaagaaagagaatttttattttaccaaatta 3985993  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    |||| || ||||||||||||||||| || |||||    
T  3985992 tccttattaactattggtttgttttccactaaag 3985959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 733 - 835
Target Start/End: Complemental strand, 8817351 - 8817249
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcatta 832  Q
    ||||||||||||| | ||||||||||||| |||||||| |||||||| ||| ||||||||| |||||||| |||||||||||||| ||| ||||||||||    
T  8817351 taaggtttttacaaatatattaagaaatgtattaattaaaagaaagagagacgttattttatcaaattattctaatcaactattgatttatttttcatta 8817252  T
Q  833 aag 835  Q
    |||    
T  8817251 aag 8817249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 713 - 826
Target Start/End: Original strand, 47823338 - 47823449
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    ||||||||||||| |  || ||||||||||| ||||||||||| ||||| |||||||| ||||||||  |||||||||| ||||||| ||||||||||||    
T  47823338 gttttaaaatgaacgttgtttaaggtttttatacacatattaaaaaatgtattaattaaaagaaaga--gatgttatttaaccaaataatcctaatcaac 47823435  T
Q  813 tattggtttgtttt 826  Q
    ||||||||||||||    
T  47823436 tattggtttgtttt 47823449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 48903516 - 48903394
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    ||||| |||||| || ||| |||| |||||||| |||||||||||||||||||||||| |||||||| | || |||||||| ||||||||  ||||||||    
T  48903516 gtttttaaatgagtgtcgtttaagttttttacatacatattaagaaatgcattaattaaaagaaagagatatattattttatcaaattattttaatcaac 48903417  T
Q  813 tattggtttgtttttcattaaag 835  Q
    ||||| ||||||||| |||||||    
T  48903416 tattgctttgtttttaattaaag 48903394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 703 - 835
Target Start/End: Original strand, 30934718 - 30934851
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttt-tacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||||||| |||||||||| |||  ||| |||  |||| ||||||||| || |||||| ||||| ||| |||||||| ||||||||||||| |||||||    
T  30934718 tactccctccgttttaaaataaatatcgtttaaatttttctacacacatgttgagaaatacattagttaaaagaaagagagatgttattttatcaaatta 30934817  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    || ||||||| |||||||||||||||||||||||    
T  30934818 tcataatcaaatattggtttgtttttcattaaag 30934851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 738 - 835
Target Start/End: Original strand, 9189379 - 9189477
Alignment:
Q  738 tttttacaca-catattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||| |||||||| |||||||||||||| || ||| | ||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  9189379 tttttacacaacatattaaaaaatgcattaattaaaataaaaagagatgttattttaccaaatcatcgtaatcaactattggtttgttttttattaaag 9189477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 739 - 828
Target Start/End: Complemental strand, 40488032 - 40487943
Alignment:
Q  739 ttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttc 828  Q
    ||||||| |||||||||||||| ||||||||| ||||||| |||||||||||||| ||||||||  ||||||||||||  ||||||||||    
T  40488032 ttttacatacatattaagaaatacattaattaaaagaaaggaagatgttattttatcaaattattataatcaactattaatttgtttttc 40487943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 702 - 826
Target Start/End: Complemental strand, 42886980 - 42886856
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    |||||||||| |||||||||||| || ||| | |||| |||||| |||||||||||| |||| | |||| |||||||| |  ||||||||||||||||||    
T  42886980 atactccctccgttttaaaatgagtgtcgttttaggtgtttacaaacatattaagaactgcaatgattaaaagaaagagaattgttattttaccaaatta 42886881  T
Q  802 tcctaatcaactattggtttgtttt 826  Q
    |||| || |||||||| || |||||    
T  42886880 tccttattaactattgattagtttt 42886856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 704 - 807
Target Start/End: Original strand, 50646052 - 50646155
Alignment:
Q  704 actccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatc 803  Q
    ||||| || |||||||||||| || ||| |||| |||||||||||||||||| ||||| |||||||| |||||||| ||||||||||  | |||||||||    
T  50646052 actccttccgttttaaaatgagtgtcgtttaagatttttacacacatattaaaaaatgtattaattaaaagaaagagagatgttattcgatcaaattatc 50646151  T
Q  804 ctaa 807  Q
    ||||    
T  50646152 ctaa 50646155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 701 - 826
Target Start/End: Complemental strand, 45460900 - 45460773
Alignment:
Q  701 gatactccctcagttttaaaatgaatgacgtctaaggtttttacacacat--attaagaaatgcattaattacaagaaagaaagatgttattttaccaaa 798  Q
    |||||||||||  ||| |||||||| | ||| |||| |||||||||||||  |||||||||||||   |||| |||||| |||  |||||||||||||||    
T  45460900 gatactccctccatttcaaaatgaacgtcgtttaagatttttacacacatgtattaagaaatgcaaagattaaaagaaataaaattgttattttaccaaa 45460801  T
Q  799 ttatcctaatcaactattggtttgtttt 826  Q
    ||||||| || ||||||||||| |||||    
T  45460800 ttatccttattaactattggttagtttt 45460773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 713 - 793
Target Start/End: Complemental strand, 48901937 - 48901857
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttatttta 793  Q
    |||||||||||| || ||| |||| |||||||| |||||||||||||||||||||||| |||||||||| || ||||||||    
T  48901937 gttttaaaatgagtgtcgtttaagttttttacatacatattaagaaatgcattaattaaaagaaagaaatatattatttta 48901857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 718 - 821
Target Start/End: Original strand, 11337547 - 11337650
Alignment:
Q  718 aaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattg 817  Q
    |||||||||| ||| |||||||||||||||||||||| |||||||| | |||| |||||||  |   || |||||||||||||||||  |||||||||||    
T  11337547 aaaatgaatgtcgtttaaggtttttacacacatattatgaaatgcaatgattagaagaaagggaatagtaattttaccaaattatccccatcaactattg 11337646  T
Q  818 gttt 821  Q
    ||||    
T  11337647 gttt 11337650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 39359076 - 39359029
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39359076 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 39359029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 44676377 - 44676330
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44676377 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 44676330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 702 - 826
Target Start/End: Complemental strand, 4759521 - 4759397
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||||||||  ||||||||||| || ||| | |||| |||| ||||||||||||||| ||| | |||| |||||||  |   |||||||||||||||||    
T  4759521 atactccctccattttaaaatgagtgtcgttttaggtgtttatacacatattaagaaaagcaatgattaaaagaaagcgaatggttattttaccaaatta 4759422  T
Q  802 tcctaatcaactattggtttgtttt 826  Q
    |||| || ||||||||||| |||||    
T  4759421 tccttattaactattggttagtttt 4759397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 735 - 826
Target Start/End: Original strand, 44064407 - 44064498
Alignment:
Q  735 aggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaattatcctaatcaactattggtttgtttt 826  Q
    ||||||||||||||||||||||||||||| | |||| |||||||| | ||| |||||||||||||||||||| || | ||||||||| |||||    
T  44064407 aggtttttacacacatattaagaaatgcaatgattaaaagaaagaga-atgattattttaccaaattatccttattagctattggttagtttt 44064498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 23525310 - 23525357
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  23525310 attttaccaaattatcataatcaactattggtttgtttttcattaaag 23525357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 36460961 - 36460914
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36460961 attttaccaaattatcctaatcaactattggtttgtttttcatcaaag 36460914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 38016530 - 38016483
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38016530 attttaccaaattatcctaatcaactattagtttgtttttcattaaag 38016483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 772 - 835
Target Start/End: Original strand, 40717649 - 40717711
Alignment:
Q  772 aagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| | ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  40717649 aagaaatagagatgttattttaccaaattatcttaatcaactattggtttg-ttttcattaaag 40717711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 41287490 - 41287537
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  41287490 attttaccaaattatcctaatcaactattggtttctttttcattaaag 41287537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 703 - 826
Target Start/End: Original strand, 42571449 - 42571572
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| |||| ||||||| || ||| | |||| |||||||||||||||||||||||| | |||| |||| ||| |   ||||||||| ||||||||    
T  42571449 tactccctccgtttcaaaatgagtgccgttttaggtctttacacacatattaagaaatgcaatgattaaaagatagagaatggttattttatcaaattat 42571548  T
Q  803 cctaatcaactattggtttgtttt 826  Q
    ||| || | ||||||||| |||||    
T  42571549 ccttattagctattggttagtttt 42571572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 45566955 - 45566908
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45566955 attttaccaaattatcctaatcaaccattggtttgtttttcattaaag 45566908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 713 - 791
Target Start/End: Complemental strand, 31190706 - 31190629
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattt 791  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||||| |||||||| || ||| | |||||||||||    
T  31190706 gttttaaaatgaatgtcgtttaaggtttttacatacatattaagaaatgtattaattataa-aaaaatagatgttattt 31190629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 790 - 835
Target Start/End: Original strand, 50088312 - 50088357
Alignment:
Q  790 tttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  50088312 tttaccaaattatcataatcaactattggtttgtttttcattaaag 50088357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 30680767 - 30680850
Alignment:
Q  737 gtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggttt 821  Q
    ||||||||  ||||||||| ||||| ||| |||| |||||| | |||||||||||||||||||||| | ||||||||||||||||    
T  30680767 gtttttacgtacatattaaaaaatgtattgattaaaagaaaaagagatgttattttaccaaattattc-aatcaactattggttt 30680850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 2458164 - 2458117
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  2458164 attttaccaaattatcctaatcaactattggtttaattttcattaaag 2458117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 13756867 - 13756914
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||    
T  13756867 attttagcaaattatcctaatcaactattggtttgttttttattaaag 13756914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 737 - 792
Target Start/End: Complemental strand, 22857262 - 22857207
Alignment:
Q  737 gtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttatttt 792  Q
    ||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||    
T  22857262 gtttttacacacatattaaaaaatgcattaattaaaagaaagagcgatgttatttt 22857207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 831
Target Start/End: Original strand, 30426317 - 30426360
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcatt 831  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  30426317 attttaccaaattatcttaatcaactattggtttgtttttcatt 30426360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 31853556 - 31853603
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||    
T  31853556 attttatcaaattatcctaatcaactattggtttgtctttcattaaag 31853603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 33194025 - 33194072
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||    
T  33194025 attttaccaaattatcataatcaactattgatttgtttttcattaaag 33194072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 827
Target Start/End: Original strand, 36729766 - 36729805
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgttttt 827  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36729766 attttaccaaattatcctaatcaactattggtttgttttt 36729805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 41850537 - 41850491
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41850537 attttaccaaattatcctaatcaactattggtttg-ttttcattaaag 41850491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 45213716 - 45213763
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  45213716 attttaccaaattattctaatcaactattggtttgcttttcattaaag 45213763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 47138121 - 47138074
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||    
T  47138121 attttaccaaattatcctaatcaattattcgtttgtttttcattaaag 47138074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 47895338 - 47895385
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  47895338 attttaccaaattatcctaatcaactatttgtttgcttttcattaaag 47895385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 51398166 - 51398119
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  51398166 attttaccaaattatcctaatcaactattgatttatttttcattaaag 51398119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 719 - 769
Target Start/End: Original strand, 40717298 - 40717348
Alignment:
Q  719 aaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaatt 769  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||||||||    
T  40717298 aaatgaacgtcgtttaaggtttttacacacatattaagaaatgcattaatt 40717348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 745 - 826
Target Start/End: Complemental strand, 19115574 - 19115493
Alignment:
Q  745 acacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttt 826  Q
    ||||||||||||||||||| | |||| |||||| | |   ||||||||||||||||||||| || ||||||||||| |||||    
T  19115574 acacatattaagaaatgcaatgattaaaagaaaaagaatggttattttaccaaattatccttattaactattggttagtttt 19115493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 703 - 826
Target Start/End: Original strand, 50038092 - 50038214
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaa-agaaagatgttattttaccaaatta 801  Q
    |||||| || |||||||||| | || ||| | |||| |||||||||||||||||||||||| | |||| ||||| |||| ||  ||||||||||||||||    
T  50038092 tactccttctgttttaaaataagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaagagaatga--ttattttaccaaatta 50038189  T
Q  802 tcctaatcaactattggtttgtttt 826  Q
    |||| || || ||||| || |||||    
T  50038190 tccttattaaatattgcttagtttt 50038214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 788 - 833
Target Start/End: Original strand, 53200675 - 53200720
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaa 833  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  53200675 attttaccaaattatcctaatcaactattagtttgcttttcattaa 53200720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 788 - 832
Target Start/End: Complemental strand, 30431276 - 30431232
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcatta 832  Q
    ||||||||||||||||||||||||||||||  |||||||||||||    
T  30431276 attttaccaaattatcctaatcaactattgacttgtttttcatta 30431232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 38363947 - 38363900
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||    
T  38363947 attttaccaaattatcctaataaaccgttggtttgtttttcattaaag 38363900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 749 - 814
Target Start/End: Complemental strand, 4392675 - 4392612
Alignment:
Q  749 atattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaacta 814  Q
    |||||||||||| ||||||||| |||||||  ||||||||| |||| |||||||||||| ||||||    
T  4392675 atattaagaaatacattaattaaaagaaag--agatgttatcttactaaattatcctaaccaacta 4392612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 702 - 760
Target Start/End: Complemental strand, 19897529 - 19897471
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaat 760  Q
    |||||||||| |||||||||||| ||  || ||||||| ||||||||||||||||||||    
T  19897529 atactccctctgttttaaaatgagtgttgtttaaggttgttacacacatattaagaaat 19897471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 788 - 834
Target Start/End: Original strand, 36381366 - 36381412
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||||    
T  36381366 attttaccaaattatcttaatcatctattgatttgtttttcattaaa 36381412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 785 - 835
Target Start/End: Complemental strand, 50346783 - 50346733
Alignment:
Q  785 gttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||| ||||||||| |||| |||||||| |||||||||||||||||    
T  50346783 gttattttatcaaattatcttaattaactattgatttgtttttcattaaag 50346733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 705 - 761
Target Start/End: Complemental strand, 46160906 - 46160850
Alignment:
Q  705 ctccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatg 761  Q
    ||||||| |||| |||||||||| | | ||||||||||||||||| |||||||||||    
T  46160906 ctccctccgtttcaaaatgaatgtcctttaaggtttttacacacaaattaagaaatg 46160850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 11393701 - 11393654
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| ||||||||||||||||||||||| |||||| || |||||||    
T  11393701 attttatcaaattatcctaatcaactattgatttgttattaattaaag 11393654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 33024294 - 33024341
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| ||||||||| ||||||||||||| |||||||| ||||||||    
T  33024294 attttatcaaattatcttaatcaactattgatttgttttccattaaag 33024341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 800 - 835
Target Start/End: Original strand, 35557764 - 35557799
Alignment:
Q  800 tatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||| |||||||||||||    
T  35557764 tatcctaatcaactattggtttatttttcattaaag 35557799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 788 - 834
Target Start/End: Complemental strand, 39168862 - 39168816
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||| |||||||||||||| |||||||  ||||||||||||||||    
T  39168862 attttatcaaattatcctaattaactattaatttgtttttcattaaa 39168816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 706 - 768
Target Start/End: Complemental strand, 48169675 - 48169613
Alignment:
Q  706 tccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaat 768  Q
    ||||| ||||| |||||||||| ||||||||||| |||| || ||||||| ||||||| ||||    
T  48169675 tcccttagtttcaaaatgaatgtcgtctaaggttgttacgcatatattaaaaaatgcaataat 48169613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 784 - 825
Target Start/End: Original strand, 54403267 - 54403308
Alignment:
Q  784 tgttattttaccaaattatcctaatcaactattggtttgttt 825  Q
    ||||||||||| |||||||||| || ||||||||||||||||    
T  54403267 tgttattttactaaattatccttattaactattggtttgttt 54403308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 5e-46; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 9812403 - 9812281
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| |||||||||| ||| ||||||||||| ||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||    
T  9812403 gtttcaaaatgaatgccgtttaaggtttttatacacatattaagaaatgcactaattaaaataaagaaagatgttattttaccaaattatcctaatcaac 9812304  T
Q  813 tattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||    
T  9812303 tattggtttgtttttcattaaag 9812281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 718 - 835
Target Start/End: Original strand, 15750257 - 15750374
Alignment:
Q  718 aaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattg 817  Q
    |||||||||| ||| ||  |||||||||||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  15750257 aaaatgaatgtcgtttatagtttttacacacatattaagaaatacattaattaaaagaaagagagatattattttaccaaattatcctaatcaactattg 15750356  T
Q  818 gtttgtttttcattaaag 835  Q
    |||| |||||||||||||    
T  15750357 gtttatttttcattaaag 15750374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 735 - 834
Target Start/End: Original strand, 34796626 - 34796725
Alignment:
Q  735 aggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34796626 aggtttttacacacatgttaagaaatgcattaattaaaagaaagagatatgttattttatcaaattatcctaatcaactattggtttgtttttcattaaa 34796725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 713 - 835
Target Start/End: Original strand, 40399800 - 40399922
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| ||||| |||| ||| ||| ||||||||||| |||||||||||||||||||||| |||||||| | ||||||||||||||||||||| ||||||||    
T  40399800 gtttcaaaataaatgtcgtttaaagtttttacacatatattaagaaatgcattaattaaaagaaagagatatgttattttaccaaattatcataatcaac 40399899  T
Q  813 tattggtttgtttttcattaaag 835  Q
    |||| ||||||||||||||||||    
T  40399900 tattagtttgtttttcattaaag 40399922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 719 - 835
Target Start/End: Complemental strand, 15227794 - 15227678
Alignment:
Q  719 aaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattgg 818  Q
    ||||||||| ||| |||| ||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| |||||||| ||||||||  ||| |    
T  15227794 aaatgaatgtcgtttaagatttttacacgcatattaagaaatgcattaattaaaagaaaaaaagatgttattttatcaaattattctaatcaatcattag 15227695  T
Q  819 tttgtttttcattaaag 835  Q
    |||||||||||||||||    
T  15227694 tttgtttttcattaaag 15227678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 708 - 835
Target Start/End: Original strand, 43969970 - 43970096
Alignment:
Q  708 cctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaa 807  Q
    ||||| |||||||||||||| ||| |||| |||||| ||||||| |||||||||||||||||| |||||| ||| ||||||||||| |||||||||||||    
T  43969970 cctcaattttaaaatgaatgccgtttaagatttttatacacatactaagaaatgcattaattaaaagaaa-aaaaatgttattttatcaaattatcctaa 43970068  T
Q  808 tcaactattggtttgtttttcattaaag 835  Q
    |||||||||| ||||| ||| |||||||    
T  43970069 tcaactattgatttgtcttttattaaag 43970096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 750 - 828
Target Start/End: Complemental strand, 13496431 - 13496353
Alignment:
Q  750 tattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttc 828  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13496431 tattaagaaatgcattaattaaaagaaagaaagatgttattttaccaaattatcctaatcaattattggtttgtttttc 13496353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 702 - 835
Target Start/End: Complemental strand, 34156776 - 34156643
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    |||||||||| |||| |||||||||| ||| ||| |||||||||   |||||| ||||||||||||||| |||||| | || |||||||||| |||||||    
T  34156776 atactccctctgtttcaaaatgaatggcgtttaaagtttttacatgtatattatgaaatgcattaattaaaagaaatagagctgttattttatcaaatta 34156677  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    || |||||||| ||||||||||||||||||||||    
T  34156676 tcataatcaaccattggtttgtttttcattaaag 34156643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 41679539 - 41679420
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||||||||| |||| ||| |||| |||| |||||||||  ||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||    
T  41679539 gttttaaaataaatgtcgtttaagatttt-acacacata--aagaaatgcattaattaaaagaaagagaggtgttattttaccaaattatcataatcaac 41679443  T
Q  813 tattggtttgtttttcattaaag 835  Q
    |||||||||| ||||||||||||    
T  41679442 tattggtttgattttcattaaag 41679420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 702 - 835
Target Start/End: Original strand, 13367862 - 13367993
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    |||||||||| |||| ||||| |||   || ||||||||||||||||||||||||||||| |||||||| || |||||| ||||||||||||||| ||||    
T  13367862 atactccctccgtttcaaaataaatattgtttaaggtttttacacacatattaagaaatgtattaattaaaa-aaagaa-gatgttattttaccatatta 13367959  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||| || |||||| |||||||||||||    
T  13367960 tcctaatcaattactggtttatttttcattaaag 13367993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 703 - 835
Target Start/End: Original strand, 29312105 - 29312235
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||||||||  ||| ||||| |||| ||| ||||||||| ||||||| ||||| |||| ||||||||| |||||| | ||||||||||||||  ||||||    
T  29312105 tactccctccatttcaaaataaatgtcgtttaaggttttcacacacagattaaaaaatacattaattaaaagaaaaagagatgttattttac--aattat 29312202  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
     ||||||||||||||||||||||||||||||||    
T  29312203 actaatcaactattggtttgtttttcattaaag 29312235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 713 - 833
Target Start/End: Original strand, 5295329 - 5295448
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||||||||||||||  || ||| ||||||||||||||||||||||||| ||| |||| |||||||| | ||  ||||||||||||||||||||||||||    
T  5295329 gttttaaaatgaatgttgtttaaagtttttacacacatattaagaaatgtattgattaaaagaaagagatat-atattttaccaaattatcctaatcaac 5295427  T
Q  813 tattggtttgtttttcattaa 833  Q
    ||||| ||||||||| |||||    
T  5295428 tattgctttgttttttattaa 5295448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 6374641 - 6374521
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    ||||||||||||| | ||| ||||||||||| | | |||||| ||||| ||||||||| || |||  |||||||||||||||||||||||| ||||||||    
T  6374641 gttttaaaatgaacgtcgtttaaggtttttataaatatattaggaaatacattaattaaaaaaaa--aagatgttattttaccaaattatcataatcaac 6374544  T
Q  813 tattggtttgtttttcattaaag 835  Q
    |||| ||||||||||||||||||    
T  6374543 tattagtttgtttttcattaaag 6374521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 737 - 835
Target Start/End: Original strand, 2375793 - 2375891
Alignment:
Q  737 gtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||||| |||||| || |||||||  ||||||||||||||||||||||    
T  2375793 gtttttacacatatattaataaatgcattaattaaaagaaagagagatgttattttatcaaattgtcttaatcaatcattggtttgtttttcattaaag 2375891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 713 - 834
Target Start/End: Original strand, 6115927 - 6116055
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaa-------attatcct 805  Q
    |||| ||||||| || ||| ||||||||||||||||||||||| |||||||||||||| |||||||  |||||||||||||||||        ||||| |    
T  6115927 gtttcaaaatgagtgtcgtttaaggtttttacacacatattaaaaaatgcattaattaaaagaaagggagatgttattttaccaacttatcttttatctt 6116026  T
Q  806 aatcaactattggtttgtttttcattaaa 834  Q
    |||||||||||||||||||||||||||||    
T  6116027 aatcaactattggtttgtttttcattaaa 6116055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 736 - 835
Target Start/End: Original strand, 14234161 - 14234260
Alignment:
Q  736 ggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||| |||||| ||||||| |||| ||||||||| | |||||| | |||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  14234161 ggtttctacacaaatattaaaaaatacattaattaaacgaaagagatatgttattttgccaaattatcctaatcaactattggtttgtttttcgttaaag 14234260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 737 - 835
Target Start/End: Complemental strand, 42179301 - 42179203
Alignment:
Q  737 gtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  |||| |||||||| |||||||| |||| ||||||| ||||||||||||||||||    
T  42179301 gtttttacacacatattaaaaaatacattaattaaaagaaagagtgatgatattttactaaattatcataattaactattagtttgtttttcattaaag 42179203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 703 - 835
Target Start/End: Original strand, 31233857 - 31233984
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| |||| |||||||||| ||  |||| ||||||||||||||||||||||| ||||||||     ||| ||| | |||| ||||| |||| ||    
T  31233857 tactccctctgtttcaaaatgaatgtcgcttaagatttttacacacatattaagaaatacattaatt-----aaaaaaaaaagttactttacaaaatcat 31233951  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||| |||||||||||||    
T  31233952 cctaatcaactattggtttatttttcattaaag 31233984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 770 - 832
Target Start/End: Complemental strand, 515050 - 514988
Alignment:
Q  770 acaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcatta 832  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  515050 acaagaaagagagatgttattttagcaaattatcctaatcaactattggtttgtttttcatta 514988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 702 - 826
Target Start/End: Original strand, 396136 - 396260
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaatt 800  Q
    ||||||| || |||| ||||||| || ||| | |||| |||||||||||||||||||||||| | |||| |||||||| | ||| |||||||||||||||    
T  396136 atactccatccgtttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatgcaatgattaaaagaaagaga-atgattattttaccaaatt 396234  T
Q  801 atcctaatcaactattggtttgtttt 826  Q
    ||||| || ||||||||||| |||||    
T  396235 atccttattaactattggttagtttt 396260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 697 - 826
Target Start/End: Original strand, 15160363 - 15160492
Alignment:
Q  697 gtttgatactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttacca 796  Q
    |||| ||| |||||| |||| ||||||| || | | | |||| |||||||||||||||||||||||| | |||| |||||||| |   ||||||||||||    
T  15160363 gttttataatccctccgtttcaaaatgagtgtcattttaggtgtttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttacca 15160462  T
Q  797 aattatcctaatcaactattggtttgtttt 826  Q
    ||||||||| || ||||||||||| |||||    
T  15160463 aattatccttattaactattggttagtttt 15160492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 702 - 826
Target Start/End: Original strand, 39765782 - 39765906
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaatt 800  Q
    |||||||||| |||| ||||||| || ||| | |||| ||||||||||||||||||||| || | |||| |||||||| | ||| |||||||||||||||    
T  39765782 atactccctccgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatacaatgattaaaagaaagaga-atgcttattttaccaaatt 39765880  T
Q  801 atcctaatcaactattggtttgtttt 826  Q
    ||||| || ||||||||||| |||||    
T  39765881 atccttattaactattggttagtttt 39765906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 4760556 - 4760603
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4760556 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 4760603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 718 - 832
Target Start/End: Complemental strand, 12339937 - 12339825
Alignment:
Q  718 aaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattg 817  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||| | |||| |||| ||||   ||||||||||| ||||||| || ||  | |||||    
T  12339937 aaaatgaatgtcgtttaaggtttttacacacatattaagaaatgcaatgattaaaagagagaa--ttgttattttacaaaattattcttattgattattg 12339840  T
Q  818 gtttgtttttcatta 832  Q
    ||| |||||||||||    
T  12339839 gttagtttttcatta 12339825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 39698663 - 39698710
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39698663 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 39698710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 40228730 - 40228683
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40228730 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 40228683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 703 - 792
Target Start/End: Complemental strand, 515142 - 515053
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttatttt 792  Q
    ||||||||| |||| |||||||||| | | ||||||||||| ||||||||||||||||| |||||||| || ||||| ||||||| ||||    
T  515142 tactccctccgtttcaaaatgaatgtcatttaaggtttttatacacatattaagaaatgtattaattaaaataaagagagatgttttttt 515053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 17921113 - 17921066
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17921113 attttaccaaattattctaatcaactattggtttgtttttcattaaag 17921066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 31899245 - 31899292
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  31899245 attttaccaaattatcctaatcaactattgatttgtttttcattaaag 31899292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 36669791 - 36669838
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36669791 attttaccaaattatcctaatcaactattagtttgtttttcattaaag 36669838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 43448872 - 43448825
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43448872 attttaccaaattatcctaatcaactattagtttgtttttcattaaag 43448825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 703 - 821
Target Start/End: Original strand, 24245130 - 24245248
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| |||| |||||||||| ||| |||| ||||||||||||||||||||||| || | |||| || ||||  |   || |||||||||||||||    
T  24245130 tactccctccgtttcaaaatgaatgtcgtttaagatttttacacacatattaagaaatccaatgattagaaaaaagggaatagtaattttaccaaattat 24245229  T
Q  803 cctaatcaactattggttt 821  Q
    ||  ||||||| |||||||    
T  24245230 ccctatcaacttttggttt 24245248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 718 - 788
Target Start/End: Original strand, 33746067 - 33746137
Alignment:
Q  718 aaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgtta 788  Q
    |||||||||| | | |||||||||||||| |||||||| |||||||||||||| |||||||||| ||||||    
T  33746067 aaaatgaatgtcatttaaggtttttacacgcatattaaaaaatgcattaattaaaagaaagaaatatgtta 33746137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 788 - 832
Target Start/End: Original strand, 5790643 - 5790687
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcatta 832  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  5790643 attttaccaaattatcctaatcaactattggtttgcttttcatta 5790687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 29025746 - 29025793
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  29025746 attttaccaaattatcctaatcaactattgatttgttttttattaaag 29025793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 43084624 - 43084671
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||    
T  43084624 attttaccaaattaccctaatcaactattggtttgtgtttcattaaag 43084671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 781 - 835
Target Start/End: Original strand, 45358885 - 45358939
Alignment:
Q  781 agatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||| ||||||  |||||||||||| ||||||||||||||||||    
T  45358885 agatgttattttaccgaattattttaatcaactattagtttgtttttcattaaag 45358939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 788 - 828
Target Start/End: Original strand, 9304631 - 9304671
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttc 828  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  9304631 attttaccaaattatcctaatcaactattgatttgtttttc 9304671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 4989634 - 4989587
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  4989634 attttcccaaattatcctactcaactattgatttgtttttcattaaag 4989587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 7839614 - 7839567
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  7839614 attttaccgaattatcttaatcaactattggtttatttttcattaaag 7839567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 9880498 - 9880545
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||| |||||||||||||||||||||| ||| |||||||||||||    
T  9880498 attttacgaaattatcctaatcaactattgatttatttttcattaaag 9880545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 39463413 - 39463367
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  39463413 attttaccaa-ttatcctaatcaactgttggtttgtttttcattaaag 39463367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 790 - 835
Target Start/End: Complemental strand, 44713688 - 44713643
Alignment:
Q  790 tttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||| |||||||||||| |||| |||||||||||||    
T  44713688 tttaccaaattatcataatcaactattagtttatttttcattaaag 44713643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 706 - 768
Target Start/End: Complemental strand, 22699636 - 22699574
Alignment:
Q  706 tccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaat 768  Q
    |||||| |||| ||||||| || ||| ||||||| || |||||||||||||||||||| ||||    
T  22699636 tccctccgtttcaaaatgagtgtcgtttaaggttgttccacacatattaagaaatgcaataat 22699574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 738 - 835
Target Start/End: Complemental strand, 1511696 - 1511599
Alignment:
Q  738 tttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||| |||||||||||||| | |||| |||||||| |  ||| ||||||| |||||||| | || || |||||  |||||||||| |||||    
T  1511696 tttttaaacacgtattaagaaatgcaatgattataagaaagagaattgtcattttactaaattatcattataaaatattgaattgtttttcactaaag 1511599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 5e-46; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 28289445 - 28289323
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| |||| ||||||||| || ||||| ||||||||||||||||||||||||||||||||    
T  28289445 gttttaaaatgaatgtcgtttaaggtttttacacacatattaataaatacattaattaaaataaagagagatgttattttaccaaattatcctaatcaac 28289346  T
Q  813 tattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||    
T  28289345 tattggtttgtttttcattaaag 28289323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 718 - 835
Target Start/End: Complemental strand, 34012682 - 34012565
Alignment:
Q  718 aaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattg 817  Q
    |||||||||| | | ||||||||||||||| |||||||||||| ||||||||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  34012682 aaaatgaatggcatttaaggtttttacacatatattaagaaatccattaattaaaagaaagataaatgttattttaccaaattatcctaatcaactattg 34012583  T
Q  818 gtttgtttttcattaaag 835  Q
     |||||||||||||||||    
T  34012582 atttgtttttcattaaag 34012565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 703 - 803
Target Start/End: Complemental strand, 4268972 - 4268872
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||| | ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4268972 tactcccgccgttttaaaatgaatgtcgtttaaggtttttacacacatattaagaaatgcattaattaaaagaaagaaagatgttattttaccaaattat 4268873  T
Q  803 c 803  Q
    |    
T  4268872 c 4268872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 714 - 835
Target Start/End: Complemental strand, 48843784 - 48843661
Alignment:
Q  714 ttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttatttt--accaaattatcctaatcaa 811  Q
    ||||||||||| || ||| ||||||||||||| ||||||||||||||||| | |||| |||||||| ||||||||||||  |||||||||||||||||||    
T  48843784 ttttaaaatgagtgtcgtttaaggtttttacatacatattaagaaatgcactgattaaaagaaagagagatgttattttacaccaaattatcctaatcaa 48843685  T
Q  812 ctattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||    
T  48843684 ctattggtttgtttttcattaaag 48843661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 733 - 835
Target Start/End: Original strand, 40753371 - 40753472
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcatta 832  Q
    |||||||||||||||||||||||||||||||||||||| || ||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  40753371 taaggtttttacacacatattaagaaatgcattaattaaaaaaaa-aaagatattattttaccaaattattctaatcaactattggtttgtttttcatta 40753469  T
Q  833 aag 835  Q
    |||    
T  40753470 aag 40753472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 744 - 835
Target Start/End: Complemental strand, 40339658 - 40339567
Alignment:
Q  744 cacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40339658 cacacagattaagaaatgcattaattaaaagaaagagaaatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 40339567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 713 - 835
Target Start/End: Original strand, 6563339 - 6563461
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    ||||||||||||||| ||| |||  ||||||| || |||||||||||| ||||||||| |||||||| | ||||||||||| ||||||||||||||||||    
T  6563339 gttttaaaatgaatgtcgtttaaattttttacgcatatattaagaaatacattaattaaaagaaagagacatgttattttatcaaattatcctaatcaac 6563438  T
Q  813 tattggtttgtttttcattaaag 835  Q
     ||||||||||||||||||||||    
T  6563439 cattggtttgtttttcattaaag 6563461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 702 - 835
Target Start/End: Original strand, 47461285 - 47461417
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||||| || |||| |||||||| | ||| |||  ||||||||||||||||||||||| ||||||||| || ||| |||||||| |||||| |||||||    
T  47461285 atactccatccgtttcaaaatgaacgtcgtttaaaatttttacacacatattaagaaatacattaattaaaaaaaa-aaagatgtcattttatcaaatta 47461383  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||    
T  47461384 tcctaatcaactattggtttgtttttcattaaag 47461417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 720 - 835
Target Start/End: Original strand, 45499751 - 45499867
Alignment:
Q  720 aatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaa-gatgttattttaccaaattatcctaatcaactattgg 818  Q
    |||||| | ||| |||| ||||||||||||||||||||||| ||||||||| || ||||| | |||| |||||||||||||||||||||| |||||||||    
T  45499751 aatgaaggtcgtttaagctttttacacacatattaagaaatacattaattaaaataaagagatgatgctattttaccaaattatcctaattaactattgg 45499850  T
Q  819 tttgtttttcattaaag 835  Q
    |||||||||||||||||    
T  45499851 tttgtttttcattaaag 45499867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 703 - 819
Target Start/End: Complemental strand, 42286138 - 42286022
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||||||||| | |||| || ||||| |  |||||||||||||||||||    
T  42286138 tactccctccgttttaaaatgaatgtcgtttaaggtttttacaaacatattaagaaatgcaatgattaaaataaagagaattgttattttaccaaattat 42286039  T
Q  803 cctaatcaactattggt 819  Q
    ||| || ||||||||||    
T  42286038 ccttattaactattggt 42286022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 733 - 803
Target Start/End: Complemental strand, 4268863 - 4268793
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatc 803  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  4268863 taaggtttttacacacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaaattatc 4268793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 757 - 835
Target Start/End: Complemental strand, 21819469 - 21819391
Alignment:
Q  757 aaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||| ||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21819469 aaatacattaattaaaagaaagagagatgttattttaccaaattatcctaataaactattggtttgtttttcattaaag 21819391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 718 - 835
Target Start/End: Complemental strand, 37491012 - 37490896
Alignment:
Q  718 aaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgt--tattttaccaaattatcctaatcaactat 815  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||| ||||||||   |||| ||||||||  ||||||||||||||||| |||| ||||||    
T  37491012 aaaataaatgtcgtttaaggtttttacacacatattaagaaatgaattaatta---gaaaaaaagatgtgatattttaccaaattatcttaataaactat 37490916  T
Q  816 tggtttgtttttcattaaag 835  Q
    | ||||||||||||||||||    
T  37490915 tagtttgtttttcattaaag 37490896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 703 - 835
Target Start/End: Complemental strand, 25056020 - 25055890
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||||| || |||||||||||||||  || ||| ||||||||||| ||||||| ||||| |||||||| |||||||  |||||||||||||||| |||||    
T  25056020 tactccatccgttttaaaatgaatgttgtttaaagtttttacacatatattaaaaaatgtattaattaaaagaaag--agatgttattttaccacattat 25055923  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
    | ||||  ||||||| |||||||||||||||||    
T  25055922 cataatttactattgatttgtttttcattaaag 25055890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 750 - 835
Target Start/End: Original strand, 29636184 - 29636269
Alignment:
Q  750 tattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| |||||||||||||| || |||||||||||||||||||||||    
T  29636184 tattaagaaatgcattaatcaaaagaaagagagatgttattttatcaaattatcctaataaattattggtttgtttttcattaaag 29636269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 702 - 827
Target Start/End: Complemental strand, 7335518 - 7335397
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||||| || |||| |||||||| | ||  ||||||||| ||||||||||    | |||||||||||| ||||||||||||||||||||||||||||||    
T  7335518 atactccatccgtttcaaaatgaacgtcggttaaggttttaacacacatat----atatgcattaattaaaagaaagaaagatgttattttaccaaatta 7335423  T
Q  802 tcctaatcaactattggtttgttttt 827  Q
    || ||||||||| |||||||||||||    
T  7335422 tcataatcaactgttggtttgttttt 7335397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 737 - 835
Target Start/End: Original strand, 19303339 - 19303437
Alignment:
Q  737 gtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||  |||||||| |||||||||||||| |||||||| | |||||||||||| |||||||| |||||||| |||||||| |||||||||||||    
T  19303339 gtttttacatgcatattaaaaaatgcattaattaaaagaaagagaaatgttattttactaaattatcataatcaaccattggtttatttttcattaaag 19303437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 10476350 - 10476252
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattac----aagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgttttt 827  Q
    ||||||||||||||||||||||| ||||||||||||||     |||||||| | ||||||||||| ||||||||||||||||||||||| |||||||||    
T  10476350 taaggtttttacacacatattaataaatgcattaattaattaaaagaaagagaaatgttattttatcaaattatcctaatcaactattgatttgttttt 10476252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 702 - 795
Target Start/End: Complemental strand, 30312776 - 30312683
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttacc 795  Q
    |||||||||| || |||||||||||| ||| ||||||||||||||| ||||||| |||||||||||||| |||||||| | |||||||||||||    
T  30312776 atactccctccgtattaaaatgaatgtcgtttaaggtttttacacatatattaaaaaatgcattaattaaaagaaagataaatgttattttacc 30312683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 772 - 835
Target Start/End: Original strand, 21752091 - 21752154
Alignment:
Q  772 aagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21752091 aagaaagaaaaatgttattttaccaaattattctaatcaactattggtttgtttttcattaaag 21752154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 733 - 835
Target Start/End: Original strand, 24780259 - 24780361
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcatta 832  Q
    ||||||||||||  |||| |||| ||||| |||||||| |||||| | |||||||||||||| |||||||||||||| ||||||||||| ||||| ||||    
T  24780259 taaggtttttacgtacatgttaaaaaatgtattaattaaaagaaaaagagatgttattttactaaattatcctaatctactattggtttatttttaatta 24780358  T
Q  833 aag 835  Q
    |||    
T  24780359 aag 24780361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 703 - 826
Target Start/End: Complemental strand, 18292565 - 18292442
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||  |||| ||||||| || ||| | |||| |||||||||||||||||||||||| | |||| |||||||| |   ||||||||||||||||||    
T  18292565 tactcccttcgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattat 18292466  T
Q  803 cctaatcaactattggtttgtttt 826  Q
    ||| || ||||||||||| |||||    
T  18292465 ccttattaactattggttagtttt 18292442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 713 - 826
Target Start/End: Original strand, 12983075 - 12983188
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| ||||||| || ||| | |||| |||||||||||||||||||||||| | |||| |||||||| |   ||||||||||||||||||||| || |||    
T  12983075 gtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattatccttattaac 12983174  T
Q  813 tattggtttgtttt 826  Q
    |||||||| |||||    
T  12983175 tattggttagtttt 12983188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 702 - 826
Target Start/End: Complemental strand, 6747457 - 6747333
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    |||||| ||| |||| ||||||| || ||| | |||| |||||||||||||||||||||||| | |||| |||||||| |   |||||||||||||||||    
T  6747457 atactctctccgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaatta 6747358  T
Q  802 tcctaatcaactattggtttgtttt 826  Q
    |||| || ||| ||||||| |||||    
T  6747357 tccttattaaccattggttagtttt 6747333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 739 - 835
Target Start/End: Original strand, 19104948 - 19105044
Alignment:
Q  739 ttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||| |||| ||||| |||||||| |||||||| | || |||||||| ||| | ||||||||||||||||| |||||| ||||||||||    
T  19104948 ttttacacacattttaataaatgtattaattaaaagaaagagatatcttattttatcaagtaatcctaatcaactattgatttgttcttcattaaag 19105044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 1742147 - 1742100
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1742147 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 1742100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 718 - 832
Target Start/End: Original strand, 8292994 - 8293108
Alignment:
Q  718 aaaatgaatgacgtctaaggtttttacacacatattaagaaa-tgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactatt 816  Q
    ||||||||||  || |||||||||| || || |||||| ||| |||| |||||| ||||||||  |||||||||||||||||||||| | ||||||||||    
T  8292994 aaaatgaatgttgtttaaggtttttgcatacgtattaaaaaaatgcagtaattaaaagaaagag-gatgttattttaccaaattatcgtgatcaactatt 8293092  T
Q  817 ggtttgtttttcatta 832  Q
    | ||||||||||||||    
T  8293093 gatttgtttttcatta 8293108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 10599519 - 10599472
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10599519 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 10599472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 13405122 - 13405169
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13405122 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 13405169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 22298152 - 22298105
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22298152 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 22298105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 703 - 826
Target Start/End: Complemental strand, 34275024 - 34274901
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| |||||||||| |||| ||| | |||| ||||||| ||||||||||||| || | |||| |||||||| |   ||||||||||||||||||    
T  34275024 tactccctccgttttaaaataaatgtcgttttaggtgtttacacgcatattaagaaatacaatgattaaaagaaagagaatggttattttaccaaattat 34274925  T
Q  803 cctaatcaactattggtttgtttt 826  Q
    | | || ||||||||||| |||||    
T  34274924 ctttattaactattggttagtttt 34274901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 724 - 835
Target Start/End: Complemental strand, 47187871 - 47187760
Alignment:
Q  724 aatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgt 823  Q
    |||| ||| |||||||||||||  |||||||| ||||||||| |||| |||||||| |  |||||||||||||||||||||| || || ||||| | |||    
T  47187871 aatgtcgtttaaggtttttacatgcatattaaaaaatgcattgattaaaagaaagagaattgttattttaccaaattatccttattaattattgatatgt 47187772  T
Q  824 ttttcattaaag 835  Q
    |||| |||||||    
T  47187771 tttttattaaag 47187760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 788 - 834
Target Start/End: Original strand, 23155457 - 23155503
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23155457 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 23155503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 702 - 826
Target Start/End: Complemental strand, 2297274 - 2297150
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaatt 800  Q
    |||||||||| |||| ||||| | || ||| | |||| |||||||||||||||||||||||| | |||| |||||||| | ||| |||||||||||||||    
T  2297274 atactccctctgtttcaaaattattgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaagaga-atgattattttaccaaatt 2297176  T
Q  801 atcctaatcaactattggtttgtttt 826  Q
    ||| | || ||||||||||| |||||    
T  2297175 atctttattaactattggttagtttt 2297150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 713 - 826
Target Start/End: Original strand, 12977617 - 12977730
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| ||||||| || ||| | |||| |||||||||||||||||||||||| | |||| |||||||| |   ||||||||||||||||||||| || |||    
T  12977617 gtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattatccttattaac 12977716  T
Q  813 tattggtttgtttt 826  Q
    |||| ||| |||||    
T  12977717 tattagttagtttt 12977730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 35777975 - 35777928
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35777975 attttaccaaattatcctaataaactattggtttgtttttcattaaag 35777928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 37815880 - 37815833
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  37815880 attttaccaaattatcctaatcaactattgatttgtttttcattaaag 37815833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 751 - 835
Target Start/End: Original strand, 24133091 - 24133173
Alignment:
Q  751 attaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac--tattggtttgtttttcattaaag 835  Q
    |||||||||| |||||||||    |||||||||| ||||||||||||||||| |||||||||  ||||| |||||||||||||||||    
T  24133091 attaagaaatacattaatta----aaagaaagatattattttaccaaattatactaatcaactgtattgatttgtttttcattaaag 24133173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 773 - 835
Target Start/End: Original strand, 33939714 - 33939776
Alignment:
Q  773 agaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||| | |||||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  33939714 agaaagagatatgttattttaccaaattattctaatcaactgttggtttatttttcattaaag 33939776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 701 - 826
Target Start/End: Complemental strand, 37502551 - 37502426
Alignment:
Q  701 gatactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaat 799  Q
    ||||||| ||| |||||||||||| || | | | | || ||||||||||||||||||||| || | |||| |||||||| | ||| ||||||||||||||    
T  37502551 gatactcactccgttttaaaatgagtgtcattttatgtgtttacacacatattaagaaatacaatgattaaaagaaagaga-atgattattttaccaaat 37502453  T
Q  800 tatcctaatcaactattggtttgtttt 826  Q
    |||||| || ||||||||||| |||||    
T  37502452 tatccttattaactattggttagtttt 37502426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 788 - 834
Target Start/End: Complemental strand, 44453289 - 44453243
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  44453289 attttaccaaattatcctaatcacctattggtttgtttttcattaaa 44453243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 703 - 826
Target Start/End: Original strand, 715784 - 715907
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||||| || |||| ||||||| || ||| | || | |||||||| ||||||||||||||| | |||| ||||||||||    |||||||||||||||||    
T  715784 tactccatccgtttcaaaatgagtgtcgttttagctctttacacatatattaagaaatgcaatgattaaaagaaagaaaatcattattttaccaaattat 715883  T
Q  803 cctaatcaactattggtttgtttt 826  Q
    ||| || | ||||||||| |||||    
T  715884 ccttattagctattggttagtttt 715907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 23935577 - 23935530
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  23935577 attttaccaaattatcctaatcaactattgttttgttttttattaaag 23935530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 24680284 - 24680237
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  24680284 attttaccaaattattctaatcaactattgatttgtttttcattaaag 24680237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 27947496 - 27947543
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||    
T  27947496 attttactaaattatcctaatcaactattgatttgtttttcattaaag 27947543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 42879929 - 42879976
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  42879929 attttaccaaattatcgtaatcaactattagtttgtttttcattaaag 42879976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 45948625 - 45948672
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  45948625 attttaccaaattatcgtaatcaaccattggtttgtttttcattaaag 45948672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 713 - 826
Target Start/End: Complemental strand, 18270798 - 18270685
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaattatcctaatcaa 811  Q
    |||| ||||||| || ||| | |||| |||||||||||||||||||||||| | |||| |||||| | | ||| |||||||||||||||||||| || ||    
T  18270798 gtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaataga-atgattattttaccaaattatccttattaa 18270700  T
Q  812 ctattggtttgtttt 826  Q
    |||||| || |||||    
T  18270699 ctattgattagtttt 18270685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 713 - 813
Target Start/End: Original strand, 25086817 - 25086918
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaa-tgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaa 811  Q
    ||||||||||||| | ||| |||| ||||||  |||||||||| ||| ||||||||||| |||||||| | ||  ||||||| |||||||| ||||||||    
T  25086817 gttttaaaatgaacgtcgtttaagatttttatgcacatattaaaaaaatgcattaattaaaagaaagagaaatagtattttatcaaattattctaatcaa 25086916  T
Q  812 ct 813  Q
    ||    
T  25086917 ct 25086918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 788 - 828
Target Start/End: Original strand, 7795238 - 7795278
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttc 828  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  7795238 attttaccaaattatcctaatcacctattggtttgtttttc 7795278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 747 - 826
Target Start/End: Complemental strand, 31883970 - 31883891
Alignment:
Q  747 acatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaattatcctaatcaactattggtttgtttt 826  Q
    ||||||||||||||||| | |||| |||||||| | ||| |||||||||||||||||||| || ||||||||||| |||||    
T  31883970 acatattaagaaatgcaatgattaaaagaaagaga-atgattattttaccaaattatccttattaactattggttagtttt 31883891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 760 - 835
Target Start/End: Complemental strand, 1031338 - 1031263
Alignment:
Q  760 tgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||| |||||||| |||||||||  |||||||||||| ||||||||||||| ||  ||||| |||||||    
T  1031338 tgcatttattaaaagaaagagagatgttatcataccaaattatcataatcaactattgattctttttttattaaag 1031263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 702 - 760
Target Start/End: Complemental strand, 40800392 - 40800334
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaat 760  Q
    |||||||||| |||| |||||||| | ||| ||||||| ||||||||||||||||||||    
T  40800392 atactccctccgtttcaaaatgaaagtcgtttaaggttgttacacacatattaagaaat 40800334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 788 - 834
Target Start/End: Original strand, 45933584 - 45933630
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  45933584 attttatcaaattatcttaatcaacttttggtttgtttttcattaaa 45933630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 733 - 821
Target Start/End: Complemental strand, 35778724 - 35778636
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggttt 821  Q
    ||||||||||||||| || |||||||||||||| |||| || ||||  |   || |||||||||||||||||   ||||||||||||||    
T  35778724 taaggtttttacacatatgttaagaaatgcattgattagaataaagtgaatagtaattttaccaaattatccctttcaactattggttt 35778636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 27935923 - 27935876
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||| | |||| |||||||| |||||||||||||||||    
T  27935923 attttaccaaattagcttaattaactattgatttgtttttcattaaag 27935876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 827
Target Start/End: Original strand, 29530930 - 29530969
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgttttt 827  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  29530930 attttaccaaatcatcctaatcaactattgatttgttttt 29530969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 31418508 - 31418555
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||| ||||||||||||||||||||||||  ||||||||| |||||||    
T  31418508 atttcaccaaattatcctaatcaactattaatttgtttttaattaaag 31418555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 41137884 - 41137838
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||||    
T  41137884 attttaccaaattatcctaatcaactactggtttg-atttcattaaag 41137838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 48684879 - 48684832
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||| |||| |||||| ||||||||| |||||||    
T  48684879 attttaccaaattatccttatcatctattgatttgttttttattaaag 48684832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 736 - 770
Target Start/End: Complemental strand, 4268780 - 4268746
Alignment:
Q  736 ggtttttacacacatattaagaaatgcattaatta 770  Q
    ||||||||||||| |||||||||||||||||||||    
T  4268780 ggtttttacacacttattaagaaatgcattaatta 4268746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 793 - 835
Target Start/End: Complemental strand, 7759410 - 7759368
Alignment:
Q  793 accaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  7759410 accaaattatcctaatcaactattagtttgttttctattaaag 7759368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 702 - 826
Target Start/End: Original strand, 31929779 - 31929904
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttacc-aaat 799  Q
    ||||||||||  ||| ||||||| || ||| | || | |||||||| ||||||||||||||| | ||||  ||||||| | ||| |||||||||| ||||    
T  31929779 atactccctccatttcaaaatgagtgtcgttttagatgtttacacatatattaagaaatgcaatgattaacagaaagaga-atgtttattttaccaaaat 31929877  T
Q  800 tatcctaatcaactattggtttgtttt 826  Q
    |||||| || ||||||||||| |||||    
T  31929878 tatccttattaactattggttagtttt 31929904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 742 - 826
Target Start/End: Original strand, 44567002 - 44567085
Alignment:
Q  742 tacacacatattaagaaatgcattaattacaagaaa-gaaagatgttattttaccaaattatcctaatcaactattggtttgtttt 826  Q
    |||| ||||||||||||||||| |||||| || ||| ||| |||  ||||||| ||||||||||| || ||||||||||| |||||    
T  44567002 tacatacatattaagaaatgcaataattaaaaaaaaagaatgat--tattttatcaaattatccttattaactattggttagtttt 44567085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 785 - 826
Target Start/End: Complemental strand, 7900087 - 7900046
Alignment:
Q  785 gttattttaccaaattatcctaatcaactattggtttgtttt 826  Q
    ||||||||||||||||||||| |  |||||||||||||||||    
T  7900087 gttattttaccaaattatcctcaataactattggtttgtttt 7900046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 2e-45; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 706 - 835
Target Start/End: Original strand, 37038685 - 37038814
Alignment:
Q  706 tccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcct 805  Q
    |||||| |||| ||||||| || ||| |||| ||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  37038685 tccctccgtttcaaaatgagtgtcgtttaagatttttacacacatattaagaaatacattaattaaaagaaagagagatgttattttaccaaattatcct 37038784  T
Q  806 aatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||    
T  37038785 aatcaactattggtttgtttttcattaaag 37038814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 703 - 835
Target Start/End: Original strand, 11188162 - 11188294
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| |||| |||||||||| ||| ||||||| ||||||||||||||| |||||||||||| | |||||||| ||||||||||||||||| ||||    
T  11188162 tactccctccgtttcaaaatgaatgtcgtttaaggttcttacacacatattaataaatgcattaatcaaaagaaagagagatgttattttaccaagttat 11188261  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| ||||||||||||||||    
T  11188262 cctaatcaactattgggttgtttttcattaaag 11188294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 703 - 835
Target Start/End: Complemental strand, 33056131 - 33055999
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||||| || ||||||||||||||| ||| ||||  ||||||||||||||||| |||||  ||||||| |||||||| ||||||||||||||||||||||    
T  33056131 tactccatccgttttaaaatgaatgtcgtttaagaattttacacacatattaaaaaatgtcttaattaaaagaaagagagatgttattttaccaaattat 33056032  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
    | |||||||||||||||||||||||||||||||    
T  33056031 cataatcaactattggtttgtttttcattaaag 33055999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 8540269 - 8540147
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    ||||||||||||||   || |||| ||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| ||||||||||||||||||    
T  8540269 gttttaaaatgaatatagtttaagatttttacacacatattaagaaatgcattaattaaaagaaaaagagatgttattttatcaaattatcctaatcaac 8540170  T
Q  813 tattggtttgtttttcattaaag 835  Q
    |||| ||||||||||||||||||    
T  8540169 tattagtttgtttttcattaaag 8540147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 737 - 835
Target Start/End: Original strand, 4658178 - 4658276
Alignment:
Q  737 gtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||| ||||| |||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4658178 gtttttacacacatattaaaaaatgtattaattaaaataaagaaagatgttattttaccaaattgtcctaatcaactattggtttgtttttcattaaag 4658276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 739 - 835
Target Start/End: Original strand, 27964175 - 27964269
Alignment:
Q  739 ttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  27964175 ttttacacacata--aagaaatgcattaattaaaagaaagaaagatgttattttaccaaattattttaatcaactattggtttgtttttcattaaag 27964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 715 - 835
Target Start/End: Complemental strand, 10195903 - 10195783
Alignment:
Q  715 tttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaacta 814  Q
    |||||||||| || ||| ||||||||||||| |  ||||||| |||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  10195903 tttaaaatgagtgtcgtttaaggtttttacatatttattaaggaatgtattaattaaaagaaagagagatgttattttaccaaattatcctaatcaacta 10195804  T
Q  815 ttggtttgtttttcattaaag 835  Q
    ||| ||||||||| |||||||    
T  10195803 ttgttttgttttttattaaag 10195783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 713 - 835
Target Start/End: Original strand, 7872701 - 7872821
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||||||||||||||  || || |||||||||||||||||||| |||| ||||||||| |||||||  |||| ||||||||||||||||| || ||| ||    
T  7872701 gttttaaaatgaatgttgtttatggtttttacacacatattaaaaaattcattaattaaaagaaag--agatattattttaccaaattattctgatcgac 7872798  T
Q  813 tattggtttgtttttcattaaag 835  Q
    ||||| |||||||||||||||||    
T  7872799 tattgatttgtttttcattaaag 7872821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 733 - 835
Target Start/End: Complemental strand, 19164564 - 19164465
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcatta 832  Q
    ||||||||||||||| ||||||||||||  |||||||| |||||||| | |||||||||||||||||||   |||||||||||||||||||| |||||||    
T  19164564 taaggtttttacacatatattaagaaatttattaattaaaagaaagagatatgttattttaccaaatta---taatcaactattggtttgttattcatta 19164468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 702 - 814
Target Start/End: Complemental strand, 29412225 - 29412113
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||||||||  ||| ||||| |||| ||| ||||||||||||||  |||||||||||||||||||||| ||| |||| | | |||||||||||||||||    
T  29412225 atactccctccatttcaaaattaatgtcgtttaaggtttttacacgtatattaagaaatgcattaattaaaaggaagagataagttattttaccaaatta 29412126  T
Q  802 tcctaatcaacta 814  Q
    |||||||||||||    
T  29412125 tcctaatcaacta 29412113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 737 - 835
Target Start/End: Complemental strand, 11132755 - 11132659
Alignment:
Q  737 gtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||| ||||||||||||||||||||||||| ||||||  ||||| |||| ||||||||||||  |||||||||||| ||||||||||||||||||    
T  11132755 gtttttacgcacatattaagaaatgcattaattaaaagaaa--aagatattatattaccaaattattataatcaactatttgtttgtttttcattaaag 11132659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 703 - 790
Target Start/End: Complemental strand, 43972016 - 43971929
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttatt 790  Q
    ||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||| | ||||||||    
T  43972016 tactccctctgtttcaaaatgaatgtcgtctaaggtttttacacacatattaagaaatgcattaatcaaaagaaagagatatgttatt 43971929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 706 - 808
Target Start/End: Original strand, 44712148 - 44712251
Alignment:
Q  706 tccctcagttttaaaa-tgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcc 804  Q
    |||||| ||||| ||| |||||| ||| |||| |||||||||||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  44712148 tccctccgttttgaaagtgaatgccgtttaagatttttacacacatattaaaaaatacattaattaaaagaaagaaagatgtaattttaccaaattatcc 44712247  T
Q  805 taat 808  Q
    ||||    
T  44712248 taat 44712251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 705 - 826
Target Start/End: Original strand, 36685656 - 36685777
Alignment:
Q  705 ctccctcagttttaaaa-tgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatc 803  Q
    ||||||| ||||||||| |||||| ||| |||||||| |||||||||||||| ||||  |||||||| || ||| | | |||||||||||||||||||||    
T  36685656 ctccctccgttttaaaaatgaatgtcgtttaaggtttatacacacatattaataaatatattaattaaaaaaaa-agatatgttattttaccaaattatc 36685754  T
Q  804 ctaatcaactattggtttgtttt 826  Q
    |||||||| ||||||||||||||    
T  36685755 ctaatcaattattggtttgtttt 36685777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 719 - 825
Target Start/End: Original strand, 14833687 - 14833794
Alignment:
Q  719 aaatgaatgacgtctaaggttttt-acacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattg 817  Q
    ||||||||| ||| |||||||||| ||| | |||||||||||||||| ||||| || ||| | | |||||||||||||||||||||| ||||||||||||    
T  14833687 aaatgaatgtcgtttaaggttttttacatatatattaagaaatgcatcaattaaaataaatataaatgttattttaccaaattatcccaatcaactattg 14833786  T
Q  818 gtttgttt 825  Q
    ||||||||    
T  14833787 gtttgttt 14833794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 779 - 834
Target Start/End: Original strand, 27726408 - 27726463
Alignment:
Q  779 aaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27726408 aaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaa 27726463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 703 - 817
Target Start/End: Original strand, 15083081 - 15083191
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||||| || |||||||||||||||   | ||| ||||||||||| ||||||| ||||||||||||||    ||||||||||||||||||||||||||||    
T  15083081 tactccatccgttttaaaatgaatgttatttaaagtttttacacatatattaataaatgcattaatta----aaagaaagatgttattttaccaaattat 15083176  T
Q  803 cctaatcaactattg 817  Q
    | ||||||| |||||    
T  15083177 cataatcaattattg 15083191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 775 - 835
Target Start/End: Original strand, 18719417 - 18719477
Alignment:
Q  775 aaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18719417 aaagagaggtgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 18719477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 703 - 835
Target Start/End: Original strand, 40608519 - 40608650
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||||| || ||| |||||||||||  || |||| |||||| ||| ||||||| |||  ||||||||| |||||| || | | |||||||||||||||||    
T  40608519 tactccatccgttgtaaaatgaatgttgtttaagatttttatacatatattaataaacacattaattaaaagaaaaaatg-tattattttaccaaattat 40608617  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||  ||||||||||||||||||    
T  40608618 cctaatcaactataagtttgtttttcattaaag 40608650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 703 - 813
Target Start/End: Original strand, 9391505 - 9391616
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaa-agatgttattttaccaaatta 801  Q
    |||||| ||||||| ||||| |||| | | |||| |||||||||||||||||| ||||| |||||||| || ||| || | |||||||||||||||||||    
T  9391505 tactccatcagtttcaaaataaatgtcatttaagatttttacacacatattaaaaaatgtattaattaaaaaaaaaaagatatgttattttaccaaatta 9391604  T
Q  802 tcctaatcaact 813  Q
    ||||||||||||    
T  9391605 tcctaatcaact 9391616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 703 - 826
Target Start/End: Complemental strand, 14286160 - 14286038
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||| |||| |||||||||||| || ||| | |||  |||||||||||||||||||||||| | |||| ||||||| | ||| |||||||| ||||||||    
T  14286160 tacttcctccgttttaaaatgagtgtcgttttaggagtttacacacatattaagaaatgcaatgattaaaagaaag-aggatattattttatcaaattat 14286062  T
Q  803 cctaatcaactattggtttgtttt 826  Q
    ||| || ||||||||||| |||||    
T  14286061 ccttattaactattggttagtttt 14286038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 733 - 835
Target Start/End: Complemental strand, 18579375 - 18579275
Alignment:
Q  733 taaggtttttacacacatatta---agaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttca 829  Q
    ||||||||||||||||||||||   |||||||||||||||  |||||  | ||||||||||||||| ||||||     ||||||||||||||||||||||    
T  18579375 taaggtttttacacacatattattaagaaatgcattaatttaaagaataagagatgttattttaccgaattat-----tcaactattggtttgtttttca 18579281  T
Q  830 ttaaag 835  Q
    ||||||    
T  18579280 ttaaag 18579275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 29396677 - 29396724
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29396677 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 29396724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 29808969 - 29808922
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29808969 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 29808922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 30855261 - 30855214
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30855261 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 30855214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 702 - 826
Target Start/End: Complemental strand, 16792716 - 16792593
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaatt 800  Q
    |||||||||| |||||||||||||||  || | |||| ||||||||  |||||||||||||| | |||| |||||||| | ||| |||||||||||||||    
T  16792716 atactccctccgttttaaaatgaatgt-gttttaggtgtttacacatgtattaagaaatgcaattattataagaaagata-atgcttattttaccaaatt 16792619  T
Q  801 atcctaatcaactattggtttgtttt 826  Q
    ||||| || ||||||||||| |||||    
T  16792618 atccttattaactattggttagtttt 16792593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 786 - 835
Target Start/End: Complemental strand, 43971646 - 43971597
Alignment:
Q  786 ttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43971646 ttattttaccgaattatcctaatcaactattggtttgtttttcattaaag 43971597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 738 - 798
Target Start/End: Complemental strand, 4469650 - 4469591
Alignment:
Q  738 tttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaa 798  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||    
T  4469650 tttttacacacatat-aagaaatgcattaattaaaagaaagagagatgttattttaccaaa 4469591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 751 - 835
Target Start/End: Complemental strand, 34455884 - 34455800
Alignment:
Q  751 attaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||| |||| |||| |||| |||||||| ||||||| |||||||||||||||||||||||||| ||||||  |||| |||||||    
T  34455884 attaaaaaattcattgattaaaagaaagagagatgttcttttaccaaattatcctaatcaactactggtttaatttttattaaag 34455800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 441228 - 441275
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  441228 attttaccaaattatcctaatcaaccattggtttgtttttcattaaag 441275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 1423347 - 1423300
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  1423347 attttaccaaattatcctaatcaactattggtttgtttctcattaaag 1423300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 4288708 - 4288755
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4288708 attttaccaaattatcctaatcaactattagtttgtttttcattaaag 4288755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 8774208 - 8774161
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  8774208 attttaccaaattatcctaatcaactattggtttatttttcattaaag 8774161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 8789427 - 8789474
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  8789427 attttaccaaattatcctaatcaactattggtttatttttcattaaag 8789474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 714 - 825
Target Start/End: Original strand, 9366100 - 9366209
Alignment:
Q  714 ttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaact 813  Q
    ||||||||||| || ||| || ||||||||||||||| |||| ||||| |||||||| ||||||||   ||  ||||||||||||||||| |||| ||||    
T  9366100 ttttaaaatgattgtcgttta-ggtttttacacacattttaa-aaatgtattaattaaaagaaagagttatcatattttaccaaattatcttaataaact 9366197  T
Q  814 attggtttgttt 825  Q
    ||||||||||||    
T  9366198 attggtttgttt 9366209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 12342249 - 12342202
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  12342249 attttaccaaattatcctaatcaactattgatttgtttttcattaaag 12342202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 12393916 - 12393963
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12393916 attttaccaaattatcctaatcaactattagtttgtttttcattaaag 12393963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 32228008 - 32228055
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32228008 attttaccaaattatcctaatcaactattgggttgtttttcattaaag 32228055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 38926762 - 38926715
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  38926762 attttaccaaattatcataatcaactattggtttgtttttcattaaag 38926715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 45081897 - 45081944
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  45081897 attttaccaaattatcctaatcaactattgttttgtttttcattaaag 45081944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 703 - 826
Target Start/End: Complemental strand, 45423848 - 45423725
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||||||||  |||||||||||||| ||| |||  |||||||||||||||||||||||| | | |||| || ||| | |  | |||||||||||||||||    
T  45423848 tactccctccattttaaaatgaatgtcgtttaaaatttttacacacatattaagaaatgaaatgattaaaataaatagaattattattttaccaaattat 45423749  T
Q  803 cctaatcaactattggtttgtttt 826  Q
    ||| || || |||||||| |||||    
T  45423748 ccttattaattattggttagtttt 45423725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 788 - 834
Target Start/End: Original strand, 6220401 - 6220447
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  6220401 attttatcaaattatcctaatcaactattggtttgtttttcattaaa 6220447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 788 - 833
Target Start/End: Complemental strand, 4133178 - 4133133
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaa 833  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  4133178 attttaccaaattatcctaatcaactattggtttgtttttctttaa 4133133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 713 - 770
Target Start/End: Original strand, 12565393 - 12565450
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaatta 770  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| |||||| |||||||    
T  12565393 gttttaaaatgaatgtcgtttaaggtttttacacacatattaataaatgcgttaatta 12565450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 702 - 763
Target Start/End: Complemental strand, 35799457 - 35799396
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgca 763  Q
    |||||||||| ||||||||||||||| ||| | |||| ||||||||||||||||||||||||    
T  35799457 atactccctccgttttaaaatgaatgtcgttttaggtgtttacacacatattaagaaatgca 35799396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 714 - 826
Target Start/End: Complemental strand, 27986257 - 27986145
Alignment:
Q  714 ttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaact 813  Q
    ||||||||||| || ||| | |||| |||||||||||||||||||||||| | |||| || ||||| |   ||||||||||||||||||||| || | ||    
T  27986257 ttttaaaatgagtgtcgttttaggtctttacacacatattaagaaatgcaattattaaaataaagagaatggttattttaccaaattatccttattagct 27986158  T
Q  814 attggtttgtttt 826  Q
    |||| || |||||    
T  27986157 attgattagtttt 27986145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 714 - 826
Target Start/End: Complemental strand, 28072789 - 28072677
Alignment:
Q  714 ttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaact 813  Q
    ||||||||||| || ||| | |||| |||||||||||||||||||||||| | |||| || ||||| |   ||||||||||||||||||||| || | ||    
T  28072789 ttttaaaatgagtgtcgttttaggtctttacacacatattaagaaatgcaattattaaaataaagagaatggttattttaccaaattatccttattagct 28072690  T
Q  814 attggtttgtttt 826  Q
    |||| || |||||    
T  28072689 attgattagtttt 28072677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 19636664 - 19636617
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||    
T  19636664 attttatcaaattatcctaatcaactattggtttatttttcattaaag 19636617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 19835257 - 19835210
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||    
T  19835257 attttatcaaattatcctaatcaactattggtttatttttcattaaag 19835210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 25383482 - 25383529
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||    
T  25383482 attttaccaaattatcttaatcaactattgatttgtttttcattaaag 25383529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 34546145 - 34546192
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||    
T  34546145 attttatcaaattatcctaatcaactattgatttgtttttcattaaag 34546192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 788 - 834
Target Start/End: Complemental strand, 13562150 - 13562104
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  13562150 attttactaaattatcctaatcaaccattggtttgtttttcattaaa 13562104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 788 - 834
Target Start/End: Complemental strand, 18717232 - 18717186
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||    
T  18717232 attttacaaaattatcctaatcaattattggtttgtttttcattaaa 18717186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 703 - 763
Target Start/End: Original strand, 681679 - 681739
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgca 763  Q
    ||||||||| |||| ||||||| || ||| |||||||||| ||||||||||||||||||||    
T  681679 tactccctccgtttcaaaatgagtgtcgtttaaggtttttgcacacatattaagaaatgca 681739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 791 - 835
Target Start/End: Original strand, 43480870 - 43480914
Alignment:
Q  791 ttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||    
T  43480870 ttactaaattatcctaataaactattggtttgtttttcattaaag 43480914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 735 - 826
Target Start/End: Complemental strand, 45301961 - 45301872
Alignment:
Q  735 aggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttt 826  Q
    |||| |||||||||||||||| ||||||| |||||| ||||||||| |  ||||||||| ||||||||  | |||| ||||||||| |||||    
T  45301961 aggtctttacacacatattaataaatgcaataattaaaagaaagaatg--gttattttatcaaattatatttatcagctattggttagtttt 45301872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 764 - 835
Target Start/End: Original strand, 12565954 - 12566025
Alignment:
Q  764 ttaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||| |||||||| | || |||||||||||||||||| || ||||  |||| |||||||||||||||||    
T  12565954 ttaattaaaagaaagagatatattattttaccaaattatcttactcaatcattgatttgtttttcattaaag 12566025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 16807514 - 16807561
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  16807514 attttatcaaattattctaatcaactatttgtttgtttttcattaaag 16807561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 16846795 - 16846842
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  16846795 attttatcaaattattctaatcaactatttgtttgtttttcattaaag 16846842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 703 - 826
Target Start/End: Original strand, 17695748 - 17695871
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||| ||| |||| ||||||| || ||| | || | |||||||||||||||||||||||| | ||||  |||| || |   ||||||||||||||||||    
T  17695748 tactctctccgtttcaaaatgagtgtcgttttagatgtttacacacatattaagaaatgcagtgattaagagaatgagaatggttattttaccaaattat 17695847  T
Q  803 cctaatcaactattggtttgtttt 826  Q
    | | || ||||||||||| |||||    
T  17695848 ctttattaactattggttagtttt 17695871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 42743184 - 42743137
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  42743184 attttaccaaattatcctaatcaattattgatttgttttttattaaag 42743137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 757 - 835
Target Start/End: Complemental strand, 19469712 - 19469634
Alignment:
Q  757 aaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||| |||||| |||||||| |  |||||| |||  |||||||| ||||||| ||||| |||||||||||||||||    
T  19469712 aaatgcaataattaaaagaaagagatgtgttatattattaaattatcgtaatcaattattgatttgtttttcattaaag 19469634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 792 - 834
Target Start/End: Original strand, 27726542 - 27726584
Alignment:
Q  792 taccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    ||||||||||||||||| ||||||| |||||||||||||||||    
T  27726542 taccaaattatcctaattaactattagtttgtttttcattaaa 27726584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 718 - 819
Target Start/End: Original strand, 32022838 - 32022939
Alignment:
Q  718 aaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaattatcctaatcaactatt 816  Q
    ||||||| || ||| | |||| |||||||||||||||||||||| | | |||| |||||||| | ||| |||||||||||||||||| | || |||||||    
T  32022838 aaaatgagtgtcgttttaggtctttacacacatattaagaaatgtaatgattaaaagaaagaga-atgattattttaccaaattatctttattaactatt 32022936  T
Q  817 ggt 819  Q
    |||    
T  32022937 ggt 32022939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 783 - 833
Target Start/End: Original strand, 33482222 - 33482272
Alignment:
Q  783 atgttattttaccaaattatcctaatcaactattggtttgtttttcattaa 833  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||| |||||    
T  33482222 atgttatcttaccaaattatcctattcaacttttggtttgttttttattaa 33482272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 788 - 834
Target Start/End: Original strand, 36106400 - 36106446
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||||||||||||| |||||||||||||| |||||||| ||||||    
T  36106400 attttaccaaattatcttaatcaactattggattgttttttattaaa 36106446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 788 - 834
Target Start/End: Complemental strand, 42753903 - 42753857
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||||||||| ||||||||||||||||| |||||||||| |||||    
T  42753903 attttaccaaatcatcctaatcaactattgatttgtttttctttaaa 42753857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 713 - 826
Target Start/End: Original strand, 43427221 - 43427333
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| ||||||| || ||| | |||| |||||||||||||||||||||||| | |||| || ||||| |   ||||||||||||||||||||| || | |    
T  43427221 gtttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatgcaat-attaaaataaagagaatggttattttaccaaattatccttattagc 43427319  T
Q  813 tattggtttgtttt 826  Q
    |||| ||| |||||    
T  43427320 tattagttagtttt 43427333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 719 - 770
Target Start/End: Complemental strand, 777934 - 777883
Alignment:
Q  719 aaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaatta 770  Q
    ||||||| | ||| ||| |||||||| |||||||||||||||||||||||||    
T  777934 aaatgaacgccgtttaaagtttttacgcacatattaagaaatgcattaatta 777883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 827
Target Start/End: Complemental strand, 42005046 - 42005007
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgttttt 827  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  42005046 atttcaccaaattatcctaatcaactatttgtttgttttt 42005007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 702 - 826
Target Start/End: Complemental strand, 5717743 - 5717619
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaatt 800  Q
    ||||||| || |||||||||||| ||  || | || | |||||  ||||||||| ||||||| | |||| |||||||| | ||| |||||||||||||||    
T  5717743 atactccgtcggttttaaaatgagtgttgttttagatgtttacgtacatattaaaaaatgcaatgattaaaagaaagaga-atgattattttaccaaatt 5717645  T
Q  801 atcctaatcaactattggtttgtttt 826  Q
    ||||| || || |||||||| |||||    
T  5717644 atccttattaaatattggttagtttt 5717619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 713 - 779
Target Start/End: Complemental strand, 7644792 - 7644724
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacac--atattaagaaatgcattaattacaagaaaga 779  Q
    |||||||||||| || ||| ||||||||||||| |   ||||||||||||| |||||||| ||||||||    
T  7644792 gttttaaaatgagtgtcgtttaaggtttttacatatgtatattaagaaatgtattaattaaaagaaaga 7644724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 740 - 805
Target Start/End: Original strand, 22620294 - 22620359
Alignment:
Q  740 tttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcct 805  Q
    |||||||||||||||| ||||||| | |||| |||||||| |   |||||||||| ||||||||||    
T  22620294 tttacacacatattaaaaaatgcaatgattaaaagaaagagaatggttattttactaaattatcct 22620359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 785 - 826
Target Start/End: Complemental strand, 35799350 - 35799309
Alignment:
Q  785 gttattttaccaaattatcctaatcaactattggtttgtttt 826  Q
    ||||||||||||||||||||| || ||||||||||| |||||    
T  35799350 gttattttaccaaattatccttattaactattggttagtttt 35799309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 8e-45; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 703 - 835
Target Start/End: Original strand, 13011260 - 13011392
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| |||| |||||||| | ||| |||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  13011260 tactccctctgtttcaaaatgaacgtcgtttaagatttttacacacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaaattat 13011359  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
    | ||||||||||| |||||||||||||||||||    
T  13011360 cttaatcaactatcggtttgtttttcattaaag 13011392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 702 - 835
Target Start/End: Original strand, 3988656 - 3988788
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    |||||||||| ||||||||||||||| ||| |||| |||||||||||||||| |||||||||| ||||| |||||||| |||||||||||||||||||||    
T  3988656 atactccctctgttttaaaatgaatgtcgtttaagatttttacacacatattgagaaatgcat-aattaaaagaaagagagatgttattttaccaaatta 3988754  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    || |||||||||||| ||||||||||||||||||    
T  3988755 tcataatcaactatttgtttgtttttcattaaag 3988788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 702 - 835
Target Start/End: Original strand, 12459230 - 12459363
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||| |||| |||| ||||||||||  || ||||||||||||||||||| |||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  12459230 atacttcctccgtttaaaaatgaatgttgtttaaggtttttacacacatactaagaaatacattaattaaaagaaagaaagatattattttaccaaatta 12459329  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||| |||||||||||||||    
T  12459330 tcctaatcaactattggtctgtttttcattaaag 12459363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 703 - 835
Target Start/End: Original strand, 21271315 - 21271447
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| |||| |||||||||| ||| |||||||||||||||||||||||||||||||||| ||| || ||||| |||||||||||||||||| |||    
T  21271315 tactccctctgtttcaaaatgaatgtcgtttaaggtttttacacacatattaagaaatgcattatttaaaataaagagagatgttattttaccaaagtat 21271414  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||| |||||| ||||||||||    
T  21271415 cctaatcaactattgatttgttcttcattaaag 21271447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 733 - 835
Target Start/End: Complemental strand, 17828493 - 17828391
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcatta 832  Q
    |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  17828493 taaggtttctacacacaaattaagaaatgcattaattaaaagaaagaaagatgttattttaccaaattatcttaatcaaccattggtttgtttttcatta 17828394  T
Q  833 aag 835  Q
    |||    
T  17828393 aag 17828391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 718 - 835
Target Start/End: Original strand, 20226148 - 20226265
Alignment:
Q  718 aaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattg 817  Q
    |||||||||| ||| |||||||||| |||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||| ||||||||||||||    
T  20226148 aaaatgaatgtcgtttaaggtttttccacatatattaagaaatgcattaatttaaagaaagagagatgttattttaccaaattatactaatcaactattg 20226247  T
Q  818 gtttgtttttcattaaag 835  Q
     |||||||||||||||||    
T  20226248 atttgtttttcattaaag 20226265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 718 - 835
Target Start/End: Original strand, 22120132 - 22120249
Alignment:
Q  718 aaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattg 817  Q
    |||||||||| ||| |||||||||| |||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||| ||||||||||||||    
T  22120132 aaaatgaatgtcgtttaaggtttttccacatatattaagaaatgcattaatttaaagaaagagagatgttattttaccaaattatactaatcaactattg 22120231  T
Q  818 gtttgtttttcattaaag 835  Q
     |||||||||||||||||    
T  22120232 atttgtttttcattaaag 22120249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 700 - 834
Target Start/End: Original strand, 1502662 - 1502796
Alignment:
Q  700 tgatactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaat 799  Q
    ||||||||| || |||| |||||||||  |||||||| |||||||| ||||| ||||||||||||| |||| |||||| | |||||||||||||||||||    
T  1502662 tgatactccttccgtttcaaaatgaatatcgtctaagatttttacatacataataagaaatgcattgattaaaagaaatagagatgttattttaccaaat 1502761  T
Q  800 tatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||| |||| |||||||||||||||||||||||||    
T  1502762 tatcttaattaactattggtttgtttttcattaaa 1502796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 713 - 835
Target Start/End: Original strand, 13503766 - 13503887
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| ||||| |||| ||| |||| ||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||| |||    
T  13503766 gtttcaaaataaatgtcgtttaagatttttacacacatattaagaaatgcattaattaaaagaaagagaaatgttattttaccaaattatcctaataaac 13503865  T
Q  813 tattggtttgtttttcattaaag 835  Q
    |||| ||||||||||||||||||    
T  13503866 tatt-gtttgtttttcattaaag 13503887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 703 - 835
Target Start/End: Complemental strand, 8958010 - 8957876
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacaca--tattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatt 800  Q
    ||||| ||| ||| ||||||||||| ||| |||||||||||||||||  ||||||||||| ||||||||| | |||||| | ||||||| ||||||||||    
T  8958010 tactcactccgttctaaaatgaatgtcgtttaaggtttttacacacacatattaagaaatacattaattaaatgaaagagatatgttatcttaccaaatt 8957911  T
Q  801 atcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||| |||||||    
T  8957910 atcctaatcaactattggtttgttttttattaaag 8957876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 703 - 835
Target Start/End: Original strand, 8961347 - 8961481
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacac--acatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatt 800  Q
    ||||| ||| ||| ||||||||||| ||| ||||||||||||||  |||||||||||||| ||||||||| | |||||| | ||||||| ||||||||||    
T  8961347 tactcactccgttctaaaatgaatgtcgtttaaggtttttacacacacatattaagaaatacattaattaaatgaaagagatatgttatcttaccaaatt 8961446  T
Q  801 atcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||| |||||||    
T  8961447 atcctaatcaactattggtttgttttttattaaag 8961481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 713 - 835
Target Start/End: Original strand, 17552169 - 17552291
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| |||||||||| ||| | | ||||||||||||| ||||| |||| ||||||||| |||||||| |||||| |||||||||||||||||||||||||    
T  17552169 gtttcaaaatgaatgtcgttttaagtttttacacacagattaaaaaatacattaattaaaagaaagagagatgtaattttaccaaattatcctaatcaac 17552268  T
Q  813 tattggtttgtttttcattaaag 835  Q
     ||||||||||||||||||||||    
T  17552269 aattggtttgtttttcattaaag 17552291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 744 - 835
Target Start/End: Complemental strand, 9940847 - 9940756
Alignment:
Q  744 cacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||||||||||||| || || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9940847 cacacagattaagaaatgcatcaactaaaagaaagagagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 9940756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 713 - 826
Target Start/End: Complemental strand, 32194039 - 32193927
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| |||||||||| ||| ||||||||||||||| ||||||||||||| ||||| || || ||| | ||||||||||||||||||||||||||||||||    
T  32194039 gtttcaaaatgaatgtcgtttaaggtttttacacatatattaagaaatgtattaaataaaa-aaatagagatgttattttaccaaattatcctaatcaac 32193941  T
Q  813 tattggtttgtttt 826  Q
    ||||||||||||||    
T  32193940 tattggtttgtttt 32193927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 744 - 835
Target Start/End: Complemental strand, 577261 - 577170
Alignment:
Q  744 cacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||||||||||||||||||| || ||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  577261 cacacagattaagaaatgcattaattaaaataaagagaaatgttattttactaaattatcctaatcaactattggtttgtttttcattaaag 577170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 713 - 835
Target Start/End: Original strand, 32619747 - 32619869
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| |||||| ||||||| || | ||||||||||||||||||||||| ||||||||| |||||||| | ||||||| |||  |||||||| ||||||||    
T  32619747 gtttcaaaatgcatgacgtttatgatttttacacacatattaagaaatacattaattaaaagaaagagaaatgttatattattaaattatcttaatcaac 32619846  T
Q  813 tattggtttgtttttcattaaag 835  Q
    ||||| |||||||||||||||||    
T  32619847 tattgatttgtttttcattaaag 32619869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 3847882 - 3847760
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| |||||||||| ||| ||||  |||||||| |||||||||||||  |||||||| ||||||||| |||||||||||||  ||||||| ||||||||    
T  3847882 gtttcaaaatgaatgtcgtttaagacttttacacgcatattaagaaataaattaattaaaagaaagaaggatgttattttacagaattatcttaatcaac 3847783  T
Q  813 tattggtttgtttttcattaaag 835  Q
    ||||| ||| ||||| |||||||    
T  3847782 tattgatttatttttaattaaag 3847760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 713 - 835
Target Start/End: Original strand, 18737010 - 18737132
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| ||||| |||| ||| ||| |||||||| |||||||||| |||||||||||||| |||||| | ||| | || |||| |||||||||||||| |||    
T  18737010 gtttgaaaattaatgtcgtttaaagtttttacgcacatattaaaaaatgcattaattaaaagaaacagagacgctaatttatcaaattatcctaattaac 18737109  T
Q  813 tattggtttgtttttcattaaag 835  Q
    ||||| ||| |||||||||||||    
T  18737110 tattgttttatttttcattaaag 18737132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 749 - 834
Target Start/End: Complemental strand, 12588719 - 12588634
Alignment:
Q  749 atattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||||||||||| ||| ||||||||| ||| ||||| ||||||    
T  12588719 atattaagaaatgcattaattaaaagaaagagagattttattttaccaaattatcttaaccaactattgatttattttttattaaa 12588634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 713 - 826
Target Start/End: Original strand, 4850428 - 4850541
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| ||||||| || ||| | |||| |||||||||||||||||||||||| | |||| |||||||| |   ||||||||||||||||||||| || |||    
T  4850428 gtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattatccttattaac 4850527  T
Q  813 tattggtttgtttt 826  Q
    |||||||| |||||    
T  4850528 tattggttagtttt 4850541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 703 - 835
Target Start/End: Original strand, 31233534 - 31233667
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||| ||| |||| |||||||||  | | |||||||||||||||||||||||||||| ||||||||| |||||||| | ||  |||| |||||| ||||    
T  31233534 tactcactctgtttcaaaatgaatatcttttaaggtttttacacacatattaagaaatacattaattaaaagaaagagaaataatattctaccaagttat 31233633  T
Q  803 cctaatcaactattgg-tttgtttttcattaaag 835  Q
    |  |||||||||| || ||| |||||||||||||    
T  31233634 ctgaatcaactatcggttttttttttcattaaag 31233667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 234190 - 234143
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  234190 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 234143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 703 - 826
Target Start/End: Complemental strand, 32429517 - 32429394
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaatta 801  Q
    ||||||||| |||| ||||||| ||  || | |||| |||||||||||||||||||||||| | |||| |||||||| | ||| ||||||||||||||||    
T  32429517 tactccctccgtttcaaaatgagtgttgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaagaga-atgattattttaccaaatta 32429419  T
Q  802 tcctaatcaactattggtttgtttt 826  Q
    || | || ||||||||||| |||||    
T  32429418 tctttattaactattggttagtttt 32429394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 737 - 835
Target Start/End: Original strand, 16127956 - 16128051
Alignment:
Q  737 gtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||| | |||||||||||||||||||||| |||||| | |  | |||||| | ||| ||||||||||||||||| |||||||||||||||||||    
T  16127956 gtttttacatatatattaagaaatgcattaattaaaagaaatata--ttttattt-atcaatttatcctaatcaactatcggtttgtttttcattaaag 16128051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 19675134 - 19675087
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  19675134 attttaccaaattatcctaatcaactattgatttgtttttcattaaag 19675087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 1135081 - 1135034
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  1135081 attttaccaaattatcctaatcaactatttgtttgtttttctttaaag 1135034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 703 - 826
Target Start/End: Complemental strand, 29400175 - 29400052
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| |||||||||||  ||  || | || | |||||||||||||||||||||||| | |||| |||||||| |   ||||||||||||||||||    
T  29400175 tactccctccgttttaaaatgtgtgttgttttagatctttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattat 29400076  T
Q  803 cctaatcaactattggtttgtttt 826  Q
    ||| || |  |||||||| |||||    
T  29400075 ccttattagttattggttagtttt 29400052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 31443442 - 31443489
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  31443442 attttaccaaattatcctaatcaactattgatttgttttttattaaag 31443489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 788 - 834
Target Start/End: Original strand, 24555924 - 24555970
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  24555924 attttaccaaattatcataatcaactattgatttgtttttcattaaa 24555970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 772 - 827
Target Start/End: Original strand, 12322865 - 12322920
Alignment:
Q  772 aagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgttttt 827  Q
    |||||| | |||||||||||||||||||||||||||| |||||||| ||| |||||    
T  12322865 aagaaatagagatgttattttaccaaattatcctaattaactattgattttttttt 12322920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 23259322 - 23259369
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||| |||| |||||| |||||    
T  23259322 attttaccaaattatcctaatcaactattgatttgcttttcactaaag 23259369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 24163711 - 24163758
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||||||    
T  24163711 attttatcaaattatccaaatcaactattagtttgtttttcattaaag 24163758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 796 - 835
Target Start/End: Original strand, 10540481 - 10540520
Alignment:
Q  796 aaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  10540481 aaattatcataatcaactattgatttgtttttcattaaag 10540520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 738 - 817
Target Start/End: Original strand, 13597901 - 13597980
Alignment:
Q  738 tttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattg 817  Q
    |||||||||||||||||||||||| |   | || |||||||| |  |||||||||||||||||||| | || ||||||||    
T  13597901 tttttacacacatattaagaaatgtaaggaataaaagaaagagaattgttattttaccaaattatctttattaactattg 13597980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 29713403 - 29713450
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||  |||||||||||||||||||| |||||||||| |||||||    
T  29713403 attttacataattatcctaatcaactattagtttgttttttattaaag 29713450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 788 - 834
Target Start/End: Original strand, 10520387 - 10520433
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||||||||||||| ||||||| |||||| |||||| ||||||||    
T  10520387 attttaccaaattatcttaatcaaatattggattgtttctcattaaa 10520433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 8e-45; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 703 - 835
Target Start/End: Complemental strand, 47817979 - 47817847
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| |||| |||||||||| ||| |||| |||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  47817979 tactccctccgtttcaaaatgaatgtcgtttaagttttttatacacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaatttat 47817880  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
    | |||||||||||||||||||||||||||||||    
T  47817879 cataatcaactattggtttgtttttcattaaag 47817847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 706 - 835
Target Start/End: Original strand, 19451124 - 19451253
Alignment:
Q  706 tccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcct 805  Q
    |||||| |||| ||||||||||  || ||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| || |||    
T  19451124 tccctccgtttcaaaatgaatgttgtttaaagtttttacacacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaaaatagcct 19451223  T
Q  806 aatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||||||||||||||||||||||    
T  19451224 aatcaattattggtttgtttttcattaaag 19451253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 703 - 834
Target Start/End: Complemental strand, 44061234 - 44061103
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||||| || ||||||||||||||| ||| ||||||||||| |||| |||||||||||||||||||||  ||||| | |||||||||||||| |||||||    
T  44061234 tactccatccgttttaaaatgaatgtcgtttaaggtttttatacacgtattaagaaatgcattaattaagagaaaaatagatgttattttactaaattat 44061135  T
Q  803 cctaatcaactattggtttgtttttcattaaa 834  Q
    | ||||||||||||||||||||||||||||||    
T  44061134 cataatcaactattggtttgtttttcattaaa 44061103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 707 - 835
Target Start/End: Complemental strand, 30261495 - 30261367
Alignment:
Q  707 ccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatccta 806  Q
    ||||| |||| |||||||||  ||| ||| |||||||||||||||||||||||| ||||||||  |||||||| ||||||||||||||||||||||  ||    
T  30261495 ccctctgtttcaaaatgaatatcgtttaaagtttttacacacatattaagaaatacattaatttaaagaaagagagatgttattttaccaaattatttta 30261396  T
Q  807 atcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||    
T  30261395 atcaactattggtttgtttttcattaaag 30261367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 703 - 835
Target Start/End: Original strand, 34413463 - 34413595
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| ||||||||||||| | ||| ||| ||||||| ||||| |||||||||||| ||||||| |||||||| | |||||||||||| |||||||    
T  34413463 tactccctccgttttaaaatgaacgtcgtttaatgtttttatacacaaattaagaaatgcgttaattaaaagaaagagaaatgttattttactaaattat 34413562  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
     |||||||||||||||||  |||||||||||||    
T  34413563 gctaatcaactattggttcttttttcattaaag 34413595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 715 - 833
Target Start/End: Original strand, 10573082 - 10573201
Alignment:
Q  715 tttaaaatgaatgacgtctaaggtttttacacacatattaagaaa-tgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaact 813  Q
    ||||||||||||| ||| |||| |||||||||||||||||| ||| | ||||| ||| |||||||| |||||||||||||||||||||||||||||||||    
T  10573082 tttaaaatgaatgtcgtttaagatttttacacacatattaaaaaaatacattatttaaaagaaagagagatgttattttaccaaattatcctaatcaact 10573181  T
Q  814 attggtttgtttttcattaa 833  Q
    |||| |||| ||||||||||    
T  10573182 attgatttgattttcattaa 10573201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 713 - 835
Target Start/End: Original strand, 6991189 - 6991311
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    ||||||||||||||  |||  |||||||||| |||||||||||||||||||||||||| |||||||| | || ||||| ||||||||||||||| |||||    
T  6991189 gttttaaaatgaatttcgttcaaggtttttatacacatattaagaaatgcattaattaaaagaaagagatattttattataccaaattatcctagtcaac 6991288  T
Q  813 tattggtttgtttttcattaaag 835  Q
    ||||||||| ||||| |||||||    
T  6991289 tattggtttattttttattaaag 6991311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 733 - 835
Target Start/End: Original strand, 47458333 - 47458435
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcatta 832  Q
    |||| |||||||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||  ||||||||||| |||    
T  47458333 taagatttttacacacatattaaaaaatacattaattaaaagaaagacagatgttattttaccaaattatcctaatcaactatatgtttgtttttcgtta 47458432  T
Q  833 aag 835  Q
    |||    
T  47458433 aag 47458435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 714 - 827
Target Start/End: Complemental strand, 41496434 - 41496321
Alignment:
Q  714 ttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaact 813  Q
    |||||||||||||  ||| ||||||||||||||||||||||| ||||| |||||||| |||||| | | ||||||||| |||||||||||||||||||||    
T  41496434 ttttaaaatgaatatcgtttaaggtttttacacacatattaaaaaatgtattaattaaaagaaatagaaatgttatttcaccaaattatcctaatcaact 41496335  T
Q  814 attggtttgttttt 827  Q
    ||| ||||||||||    
T  41496334 atttgtttgttttt 41496321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 718 - 835
Target Start/End: Complemental strand, 50203299 - 50203182
Alignment:
Q  718 aaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattg 817  Q
    ||||||||||  || |||||||||||| ||||||||||||||||  ||| ||| |||||||||| ||||||||| ||||||||||| |||||||||||||    
T  50203299 aaaatgaatgttgtttaaggtttttacgcacatattaagaaatgtgttagttaaaagaaagaaatatgttatttcaccaaattatcataatcaactattg 50203200  T
Q  818 gtttgtttttcattaaag 835  Q
     |||||||||||||||||    
T  50203199 atttgtttttcattaaag 50203182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 706 - 835
Target Start/End: Complemental strand, 52162341 - 52162212
Alignment:
Q  706 tccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcct 805  Q
    |||||| ||||||||||||||| | | | | | |||||| |  |||||||||||||||||| ||| |||||  | ||||||||||||||||||||||| |    
T  52162341 tccctccgttttaaaatgaatgtcattttatgcttttacgcgtatattaagaaatgcattagttaaaagaactagagatgttattttaccaaattatctt 52162242  T
Q  806 aatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||||||||||||||||||||||    
T  52162241 aatcaaatattggtttgtttttcattaaag 52162212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 702 - 826
Target Start/End: Original strand, 7905922 - 7906046
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    |||||||||| |||||||||||| || ||| | |||| |||||||||||||||||||||||| | |||| |||||||| |  ||||||||||||||||||    
T  7905922 atactccctccgttttaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaagagaattgttattttaccaaatta 7906021  T
Q  802 tcctaatcaactattggtttgtttt 826  Q
    |||| || ||||||| ||| |||||    
T  7906022 tccttattaactatttgttagtttt 7906046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 45839865 - 45839746
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    ||||||||||||||| ||| ||| ||||||||||| ||  |||||||||||||| ||| |||||||| | |  |||||||||||||||||||||||||||    
T  45839865 gttttaaaatgaatgtcgtttaaagtttttacacaaat--taagaaatgcatta-ttaaaagaaagagaaaaattattttaccaaattatcctaatcaac 45839769  T
Q  813 tattggtttgtttttcattaaag 835  Q
     |||| |||||||||||||||||    
T  45839768 aattgatttgtttttcattaaag 45839746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 737 - 831
Target Start/End: Complemental strand, 11364432 - 11364338
Alignment:
Q  737 gtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcatt 831  Q
    ||||||| ||||||||||| |||||||||||||| |||||||  | ||||||||||||||||||||| |||| || |||||||||||||||||||    
T  11364432 gtttttatacacatattaaaaaatgcattaattaaaagaaagggatatgttattttaccaaattatcttaattaattattggtttgtttttcatt 11364338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 702 - 835
Target Start/End: Original strand, 36558217 - 36558348
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||||| ||||||| |||||||| | ||| ||||||||||||||||||  ||||||||||| | |||| |||||||| |  | ||||||||||||||||    
T  36558217 atactccttcagtttcaaaatgaaggtcgtttaaggtttttacacacat--taagaaatgcaatgattaaaagaaagataatttttattttaccaaatta 36558314  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    |||| || ||||||||||||||||| || |||||    
T  36558315 tccttattaactattggtttgttttccactaaag 36558348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 733 - 835
Target Start/End: Complemental strand, 44651098 - 44650996
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcatta 832  Q
    |||| |||||| ||||||||| |||||||||||||||| |||||||| | ||||||||||||||||||||| |||||  ||||| |||| ||||||||||    
T  44651098 taagatttttatacacatatttagaaatgcattaattaaaagaaagatatatgttattttaccaaattatcataatcggctattagtttatttttcatta 44650999  T
Q  833 aag 835  Q
    |||    
T  44650998 aag 44650996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 702 - 834
Target Start/End: Original strand, 620091 - 620223
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||||||||  ||| ||||| | || ||| ||||||||||||||| ||||||| ||||  ||| |||| ||||| || |||||||||||||||||||||    
T  620091 atactccctccttttcaaaataattgtcgtttaaggtttttacacatatattaaaaaatatatttattaaaagaaggagagatgttattttaccaaatta 620190  T
Q  802 tcctaatcaactattggtttgtttttcattaaa 834  Q
    |  ||||||||||||| |||||||||| |||||    
T  620191 ttttaatcaactattgatttgtttttctttaaa 620223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 733 - 835
Target Start/End: Original strand, 44868199 - 44868300
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcatta 832  Q
    ||||||||||||||||||||||||||||  |||||||| || |||  ||  ||||||||||||||||| |||||||||||||||| |||||||| |||||    
T  44868199 taaggtttttacacacatattaagaaatatattaattaaaaaaaaagaat-tgttattttaccaaattgtcctaatcaactattgatttgttttccatta 44868297  T
Q  833 aag 835  Q
    |||    
T  44868298 aag 44868300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 739 - 835
Target Start/End: Original strand, 30779977 - 30780068
Alignment:
Q  739 ttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| |||||| |||||||| || |||     |||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  30779977 ttttacacacatattaggaaatgaattaattaaaaaaaa-----atgttattttactaaattatcctaatcaactattgatttgtttttcattaaag 30780068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 703 - 826
Target Start/End: Complemental strand, 4505566 - 4505443
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    ||||||||| |||| ||||||| || ||| | |||| |||||| ||||||||||||||||| | |||| |||||||| |   ||||||||||||||||||    
T  4505566 tactccctccgtttcaaaatgagtgccgttttaggtgtttacaaacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattat 4505467  T
Q  803 cctaatcaactattggtttgtttt 826  Q
    ||| || ||||||||||| |||||    
T  4505466 ccttattaactattggttagtttt 4505443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 19878804 - 19878757
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19878804 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 19878757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 24941036 - 24940989
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24941036 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 24940989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 29370759 - 29370712
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29370759 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 29370712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 45043589 - 45043636
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45043589 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 45043636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 751 - 826
Target Start/End: Original strand, 46392028 - 46392102
Alignment:
Q  751 attaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttt 826  Q
    |||||||||||||||||| | |||||| | | |||| |||||||||||||||||||||||||||||||||||||||    
T  46392028 attaagaaatgcattaataa-aagaaaaagaaatgtaattttaccaaattatcctaatcaactattggtttgtttt 46392102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 52957791 - 52957838
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  52957791 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 52957838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 702 - 826
Target Start/End: Complemental strand, 37624787 - 37624663
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaatt 800  Q
    ||||||| || |||||||||||| || ||| | |||| ||||||| |||||||||||||||| | |||| |||||||| | ||| |||||||||||||||    
T  37624787 atactccatccgttttaaaatgagtgtcgttttaggtgtttacactcatattaagaaatgcaatgattaaaagaaagaga-atgattattttaccaaatt 37624689  T
Q  801 atcctaatcaactattggtttgtttt 826  Q
    ||||| || || |||||||| |||||    
T  37624688 atccttattaattattggttagtttt 37624663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 2728399 - 2728446
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  2728399 attttaccaaattatcctaatcaactattggtgtgtttttcattaaag 2728446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 20448195 - 20448148
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20448195 attttaccaaattatcctaatcaactattggtttgattttcattaaag 20448148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 34316378 - 34316331
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  34316378 attttaccaaattatcctaatcaactattgatttgtttttcattaaag 34316331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 40345348 - 40345395
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  40345348 attttaccaaattatcctaatcaactattggtttgttttttattaaag 40345395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 41920310 - 41920357
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41920310 attttaccaaattattctaatcaactattggtttgtttttcattaaag 41920357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 42605728 - 42605681
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  42605728 attttaccaaattatcttaatcaactattggtttgtttttcattaaag 42605681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 49089619 - 49089572
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49089619 attttactaaattatcctaatcaactattggtttgtttttcattaaag 49089572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 50623240 - 50623193
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  50623240 attttatcaaattatcctaatcaactattggtttgtttttcattaaag 50623193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 52254004 - 52253957
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  52254004 attttaccaaattatcctaatcaactattggtctgtttttcattaaag 52253957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 52848055 - 52848102
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  52848055 attttaccaaattatcctaatcaactattggcttgtttttcattaaag 52848102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 781 - 835
Target Start/End: Complemental strand, 8971205 - 8971151
Alignment:
Q  781 agatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||| |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  8971205 agattttattttaccaaattatcttaataaactattggtttgtttttcattaaag 8971151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 739 - 835
Target Start/End: Original strand, 19903162 - 19903251
Alignment:
Q  739 ttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||| |||||||||||||| || ||       ||||||||||| ||||||||  ||| ||||||||||||||||||||||||||    
T  19903162 ttttacacacatattaaaaaatgcattaattaaaaaaa-------tgttattttacaaaattatctgaataaactattggtttgtttttcattaaag 19903251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 752 - 834
Target Start/End: Complemental strand, 56460277 - 56460195
Alignment:
Q  752 ttaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    ||||||||| ||||||||| |||||||| | || ||||||||| ||||||| ||||||| ||||  |||||||||||||||||    
T  56460277 ttaagaaatacattaattaaaagaaagagatatattattttactaaattattctaatcagctataagtttgtttttcattaaa 56460195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 713 - 826
Target Start/End: Original strand, 22220296 - 22220409
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| ||||||| || ||| | |||| |||||||||||||||||||||||| | |||| ||||| || |   ||||||||||||||||||||| || | |    
T  22220296 gtttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatgcaatgattaaaagaatgagaatggttattttaccaaattatccttattagc 22220395  T
Q  813 tattggtttgtttt 826  Q
    |||||||| |||||    
T  22220396 tattggttagtttt 22220409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 713 - 826
Target Start/End: Original strand, 51733432 - 51733544
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| |||||||||| ||| | |||| |||| ||||||||||||||||||| | |||| |||||||| |   |||||||||||||||||| || || |||    
T  51733432 gtttcaaaatgaatgtcgttttaggtgttta-acacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattattcttattaac 51733530  T
Q  813 tattggtttgtttt 826  Q
    |||||||| |||||    
T  51733531 tattggttagtttt 51733544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 37654566 - 37654518
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgt-ttttcattaaag 835  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37654566 attttaccaaattatcctaatcaactattggtttgttttttcattaaag 37654518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 1819718 - 1819671
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  1819718 attttaccaaattatcctaatcaactattgatttatttttcattaaag 1819671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 2493258 - 2493211
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  2493258 attttaccagattatcctaatcaactattgggttgtttttcattaaag 2493211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 19930870 - 19930823
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  19930870 attttatcaaattatcttaatcaactattggtttgtttttcattaaag 19930823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 27653830 - 27653783
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  27653830 attttaccaaattatcctaatcaactattgagttgtttttcattaaag 27653783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 28734754 - 28734707
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  28734754 attttatcaaattatcctaatcaattattggtttgtttttcattaaag 28734707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 44571866 - 44571913
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  44571866 attttaccaaattatcttaatcaactattggtttatttttcattaaag 44571913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 49080478 - 49080525
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||    
T  49080478 attttaccaaattatcataatcaactattgatttgtttttcattaaag 49080525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 53814498 - 53814545
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  53814498 attttaccaaattatcctaatcaattattgatttgtttttcattaaag 53814545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 54042184 - 54042231
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  54042184 attttatcaaattatcataatcaactattggtttgtttttcattaaag 54042231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 702 - 802
Target Start/End: Original strand, 38510171 - 38510271
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    ||||||| || |||||||||||| || ||| | || | |||||||||||||||| ||||||| | |||| |||||| | | | |||||||||||||||||    
T  38510171 atactccatccgttttaaaatgagtgtcgttttagatctttacacacatattaaaaaatgcaatgattaaaagaaaaagaaaggttattttaccaaatta 38510270  T
Q  802 t 802  Q
    |    
T  38510271 t 38510271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 18430145 - 18430098
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  18430145 attttaccaaattatcataatcaactattcgtttgtttttctttaaag 18430098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 703 - 766
Target Start/End: Complemental strand, 24157362 - 24157299
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcatta 766  Q
    ||||| ||| ||||||||||||||| ||| ||| ||||||||||||||||||| || |||||||    
T  24157362 tactctctctgttttaaaatgaatgtcgtttaaagtttttacacacatattaaaaagtgcatta 24157299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 39984973 - 39984926
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||||||| |||||||||||||| |||||||||||||||||    
T  39984973 attttatcaaattattctaatcaactattgatttgtttttcattaaag 39984926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 56373576 - 56373623
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||    
T  56373576 attttaccaaattatcctaatcaacaattattttgtttttcattaaag 56373623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 749 - 814
Target Start/End: Original strand, 18052650 - 18052713
Alignment:
Q  749 atattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaacta 814  Q
    |||||||||||| ||||||||| |||||||  ||||||||| |||| |||||||||||| ||||||    
T  18052650 atattaagaaatacattaattaaaagaaag--agatgttatcttactaaattatcctaaccaacta 18052713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 733 - 811
Target Start/End: Original strand, 25123569 - 25123647
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaa 811  Q
    |||| |||||||| | ||||||| |||| ||||||||| ||| |||| | || ||||||||| ||||||||||||||||    
T  25123569 taagatttttacataaatattaaaaaatacattaattaaaagcaagagatatattattttactaaattatcctaatcaa 25123647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 735 - 820
Target Start/End: Complemental strand, 25231373 - 25231288
Alignment:
Q  735 aggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaattatcctaatcaactattggtt 820  Q
    |||| |||||||||||||||||||||||| | |||| |||||||| | ||| |||||||| ||||||||| | || |||||||||||    
T  25231373 aggtgtttacacacatattaagaaatgcaatgattaaaagaaagaga-atgattattttatcaaattatctttattaactattggtt 25231288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 788 - 831
Target Start/End: Original strand, 38991764 - 38991805
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcatt 831  Q
    ||||||||||||||||||||||||  ||||||||||||||||||    
T  38991764 attttaccaaattatcctaatcaa--attggtttgtttttcatt 38991805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 735 - 802
Target Start/End: Complemental strand, 28308924 - 28308857
Alignment:
Q  735 aggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||| |||||||| ||||||||||||||| | |||| |||||||| | || |||||||| ||||||||    
T  28308924 aggtgtttacacatatattaagaaatgcaatgattaaaagaaagataaatattattttatcaaattat 28308857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 29519526 - 29519573
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||  ||||| ||||||||||| ||||||||||||||    
T  29519526 attttaccaaattactctaataaactattggttcgtttttcattaaag 29519573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 708 - 826
Target Start/End: Original strand, 52915474 - 52915592
Alignment:
Q  708 cctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaattatccta 806  Q
    |||| |||| ||||||| || ||| | |||| |||| |||||||||||||||| || | |||| |||||||| | ||| |||||||||||||||||| |     
T  52915474 cctccgtttcaaaatgagtgtcgttttaggtctttatacacatattaagaaatacaatgattaaaagaaagaga-atgattattttaccaaattatcttt 52915572  T
Q  807 atcaactattggtttgtttt 826  Q
    || | ||||||||| |||||    
T  52915573 attagctattggttagtttt 52915592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 3e-44; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 696 - 835
Target Start/End: Complemental strand, 11977835 - 11977696
Alignment:
Q  696 agtttgatactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttacc 795  Q
    ||||| ||||||| || |||| ||||||| || ||| |||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||    
T  11977835 agttttatactccatccgtttcaaaatgagtgtcgtttaagctttttacacacatattaagaaatgcattaattaaaagaaagagagatgttgttttacc 11977736  T
Q  796 aaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  11977735 aaattatcctaatcaactattggtttgttgttcattaaag 11977696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 13974504 - 13974382
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||    
T  13974504 gttttaaaatgaatgtcgtttaagatttttacacacatattaagaaatgcattaattaaaagaaagagaggtgttattttaccaaattatcctaatcaac 13974405  T
Q  813 tattggtttgtttttcattaaag 835  Q
    |||| ||||||||| ||||||||    
T  13974404 tatttgtttgttttccattaaag 13974382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 703 - 835
Target Start/End: Complemental strand, 21634351 - 21634219
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||||| || ||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| |||    
T  21634351 tactccatctgttttaaaatgaatgtcgtttaaagtttttacacacatattaagaaatgcattaattaaaataaagagagatgttattttaccaaagtat 21634252  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
    | ||||||| |||||||||||||||||||||||    
T  21634251 cataatcaattattggtttgtttttcattaaag 21634219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 703 - 835
Target Start/End: Complemental strand, 21642598 - 21642466
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||||| || ||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| |||    
T  21642598 tactccatctgttttaaaatgaatgtcgtttaaagtttttacacacatattaagaaatgcattaattaaaataaagagagatgttattttaccaaagtat 21642499  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
    | ||||||| |||||||||||||||||||||||    
T  21642498 cataatcaattattggtttgtttttcattaaag 21642466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 34534589 - 34534467
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| ||||||||||  || | ||||||||||||||||||||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  34534589 gtttcaaaatgaatgttgtttgaggtttttacacacatattaaaaaatgcattaattaaaagaaagagagatattattttaccaaattatcctaatcaac 34534490  T
Q  813 tattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||    
T  34534489 tattggtttgtttttcattaaag 34534467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 702 - 835
Target Start/End: Complemental strand, 843259 - 843126
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    |||||||||| |||| |||||||||||||| |||| ||| | |||| |||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  843259 atactccctccgtttcaaaatgaatgacgtttaagatttctccacaaatattaagaaatgcattaattaaaagaaggagatatgttattttaccaaatta 843160  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||| |||||||||    
T  843159 tcctaatcaactattggtttgtttctcattaaag 843126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 704 - 835
Target Start/End: Original strand, 4911023 - 4911159
Alignment:
Q  704 actccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-----ttattttaccaaa 798  Q
    ||||| || |||| |||||||||| | | |||||||||||||||||||||||||||| ||||||||| |||||||| | |||     |||||||||||||    
T  4911023 actccatctgtttcaaaatgaatgtcatttaaggtttttacacacatattaagaaatacattaattaaaagaaagataaatgttattttattttaccaaa 4911122  T
Q  799 ttatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||||||||||    
T  4911123 ttatcctaatcaactattggtttgtttttcattaaag 4911159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 702 - 835
Target Start/End: Original strand, 14161811 - 14161945
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggttttta-cacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatt 800  Q
    |||||| ||| |||| |||||||||| ||| ||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||    
T  14161811 atactcactccgtttcaaaatgaatgtcgtttaaggttttttgcacacatattaagaaatgcattaattaaaagaaagaaggatgttattttatcaaatt 14161910  T
Q  801 atcctaatcaactattggtttgtttttcattaaag 835  Q
    ||| ||| |||||| |||||| |||||||||||||    
T  14161911 atcataaacaactactggtttatttttcattaaag 14161945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 712 - 833
Target Start/End: Complemental strand, 38370103 - 38369982
Alignment:
Q  712 agttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaa 811  Q
    ||||||||||||| ||  || ||||||||||||||| ||||||| |||||||||||||| || ||||| | |||||||||||||||||||||||||||||    
T  38370103 agttttaaaatgattgttgtttaaggtttttacacatatattaataaatgcattaattaaaataaagagatatgttattttaccaaattatcctaatcaa 38370004  T
Q  812 ctattggtttgtttttcattaa 833  Q
    ||||| ||| ||||||||||||    
T  38370003 ctatttgttcgtttttcattaa 38369982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 703 - 835
Target Start/End: Original strand, 1309271 - 1309403
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||||| || |||| |||||||||| | | |||||||||||||||||||||||||||||||||||||| |||||| | | ||||||||||| ||||||||    
T  1309271 tactccatccgtttcaaaatgaatgtcatttaaggtttttacacacatattaagaaatgcattaattaaaagaaatagatatgttattttatcaaattat 1309370  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
    | |||||||| |||| ||||||| |||||||||    
T  1309371 cataatcaacaattgatttgtttatcattaaag 1309403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 714 - 835
Target Start/End: Complemental strand, 27798005 - 27797886
Alignment:
Q  714 ttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaact 813  Q
    ||||||||| |||| ||| |||  |||||||| ||||||||| |||| ||||||||| ||||||||||  |||||||||||||||||||| |||||||||    
T  27798005 ttttaaaataaatgtcgtttaaattttttacatacatattaaaaaatacattaattaaaagaaagaaa--tgttattttaccaaattatcttaatcaact 27797908  T
Q  814 attggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||    
T  27797907 attggtttgtttttcattaaag 27797886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 703 - 835
Target Start/End: Complemental strand, 7736615 - 7736482
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaa-tgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    |||||||||  ||| |||||||||| ||| |||| |||||||||||||||||| ||| ||||||||||| || ||||| | |||||||||||||| ||||    
T  7736615 tactccctccatttcaaaatgaatgtcgtttaagatttttacacacatattaaaaaaatgcattaattaaaataaagagatatgttattttaccatatta 7736516  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||| ||| ||||||||||||||    
T  7736515 tcctaatcaactattagttcgtttttcattaaag 7736482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 36165115 - 36164995
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||| ||||| |||| ||| |||| ||||||||||  |||||| |||||||||||||| |||||||  | ||||||||||||||||||||||||||||||    
T  36165115 gtttcaaaataaatgccgtttaagttttttacaca--tattaaaaaatgcattaattaaaagaaaggtaaatgttattttaccaaattatcctaatcaac 36165018  T
Q  813 tattggtttgtttttcattaaag 835  Q
    ||||| ||||||||| |||||||    
T  36165017 tattgatttgttttttattaaag 36164995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 713 - 835
Target Start/End: Original strand, 28591547 - 28591671
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcc----taat 808  Q
    ||||||||||||||| | |  ||| |||||||||||||||||| |||| ||||||||| |||||||  ||||||||||||||||||||||||    ||||    
T  28591547 gttttaaaatgaatgtcattaaagttttttacacacatattaataaatacattaattaaaagaaag--agatgttattttaccaaattatcctaattaat 28591644  T
Q  809 caactattggtttgtttttcattaaag 835  Q
    ||||||||| |||||||||||||||||    
T  28591645 caactattgatttgtttttcattaaag 28591671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 7721318 - 7721203
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||| |||||||||||       ||| | ||||||||||||| |||||||||||||||||     
T  7721318 gttttaaaatgaatgtcgtttaaggtttttatacacatattaataaatgcattaa-------aaaaagagatgttattttaacaaattatcctaatcaat 7721226  T
Q  813 tattggtttgtttttcattaaag 835  Q
    ||||||||||||| || ||||||    
T  7721225 tattggtttgtttgtctttaaag 7721203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 713 - 835
Target Start/End: Original strand, 15166935 - 15167056
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    ||||||||||||||| ||| |||  |||||| ||| ||||||| ||||  |||||||| |||||| | ||| |||||||||||||||||||||| |||||    
T  15166935 gttttaaaatgaatgtcgtttaaaatttttatacatatattaaaaaatatattaatta-aagaaatagagacgttattttaccaaattatcctagtcaac 15167033  T
Q  813 tattggtttgtttttcattaaag 835  Q
    ||||||||  |||||||||||||    
T  15167034 tattggttaatttttcattaaag 15167056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 749 - 834
Target Start/End: Complemental strand, 11195269 - 11195184
Alignment:
Q  749 atattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| || | || |||| |||||||||||||||||    
T  11195269 atattaagaaatccattaattaaaagaaagaaatatgttattttaccaaattatcttatttaattattagtttgtttttcattaaa 11195184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 702 - 826
Target Start/End: Original strand, 10344854 - 10344978
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    |||||||||| |||| ||||||| || ||| | |||| |||||||||||||||||||||||| | |||| |||||||| |   |||||||||||||||||    
T  10344854 atactccctccgtttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaatta 10344953  T
Q  802 tcctaatcaactattggtttgtttt 826  Q
    |||| || | ||||||||| |||||    
T  10344954 tccttattagctattggttagtttt 10344978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 714 - 835
Target Start/End: Original strand, 7579523 - 7579638
Alignment:
Q  714 ttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaact 813  Q
    ||||||||| |||  ||| |||||||||||||||| |||| | |||||||||||||| || |||      |||||||||  |||||||||||||||||||    
T  7579523 ttttaaaataaatatcgtttaaggtttttacacacgtattgataaatgcattaattaaaaaaaa------tgttattttttcaaattatcctaatcaact 7579616  T
Q  814 attggtttgtttttcattaaag 835  Q
    |||| |||||||||||||||||    
T  7579617 attgatttgtttttcattaaag 7579638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 713 - 834
Target Start/End: Original strand, 27557743 - 27557863
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||||||||| |||| ||| ||| | ||||| |||||||||||||||| ||||||||| |||||  | ||||||||||||| |||||||||  |||| ||    
T  27557743 gttttaaaataaatgtcgtttaaagattttatacacatattaagaaatacattaattaaaagaataagagatgttattttatcaaattatctgaatcgac 27557842  T
Q  813 tattggtttgtttttcattaaa 834  Q
    |||| |||| ||||||||||||    
T  27557843 tatt-gtttatttttcattaaa 27557863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 702 - 826
Target Start/End: Complemental strand, 32158773 - 32158649
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    |||||||||  |||||||||||| || ||| | |||  |||||||||||||||||||||||| | |||| |||||||| |   |||||||||||||||||    
T  32158773 atactccctttgttttaaaatgagtgtcgttttaggggtttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaatta 32158674  T
Q  802 tcctaatcaactattggtttgtttt 826  Q
    || | || ||||||||||| |||||    
T  32158673 tctttattaactattggttagtttt 32158649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 733 - 814
Target Start/End: Original strand, 34381743 - 34381820
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaacta 814  Q
    |||||||||||||||||||||||||||| |||| ||||    ||| ||||||||||||||| ||||||||||||||||||||    
T  34381743 taaggtttttacacacatattaagaaatacattgatta----aaaaaaagatgttattttaacaaattatcctaatcaacta 34381820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 2729783 - 2729830
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2729783 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 2729830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 34446024 - 34446071
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34446024 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 34446071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 39335200 - 39335247
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39335200 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 39335247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 42978070 - 42978117
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42978070 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 42978117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 788 - 834
Target Start/End: Original strand, 21319309 - 21319355
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21319309 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 21319355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 733 - 835
Target Start/End: Complemental strand, 41645446 - 41645344
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcatta 832  Q
    ||||| |||||||| ||||||| ||||| ||||||||| ||| || | || || ||||||| ||||||||  |||||||| |||||||||||||||||||    
T  41645446 taaggattttacacgcatattaggaaattcattaattaaaagtaatagagttgatattttatcaaattattttaatcaaccattggtttgtttttcatta 41645347  T
Q  833 aag 835  Q
    |||    
T  41645346 aag 41645344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 703 - 835
Target Start/End: Original strand, 38362052 - 38362182
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattat 802  Q
    |||| |||| ||||||||| |||||   | |||||||||||||||  |||||  ||||  |||||||| |||||||| | |||||||||||| |||||||    
T  38362052 tacttcctccgttttaaaacgaatgttatttaaggtttttacaca--tattataaaataaattaattaaaagaaagagaaatgttattttactaaattat 38362149  T
Q  803 cctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||||||| ||| ||||| |||||||    
T  38362150 cctaattaactattgttttattttttattaaag 38362182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 787 - 835
Target Start/End: Complemental strand, 14006049 - 14006001
Alignment:
Q  787 tattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14006049 tattttaccaaattatcctaatcaaatattggtttgtttttcattaaag 14006001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 8336404 - 8336451
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  8336404 attttaccaaattatcctaatcaactattggtttgttttttattaaag 8336451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 39566339 - 39566292
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  39566339 attttaccaaattatcctaatcaactattgatttgtttttcattaaag 39566292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 39730102 - 39730055
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39730102 attttaccaaattatcctaatcaactattcgtttgtttttcattaaag 39730055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 788 - 834
Target Start/End: Complemental strand, 27600550 - 27600504
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  27600550 attttaccaaattatcctaatcaactattgatttgtttttcattaaa 27600504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 3306006 - 3306053
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||    
T  3306006 attttaccaaattatcttaatcaactattgatttgtttttcattaaag 3306053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 6519133 - 6519086
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||    
T  6519133 attttatcaaattatcctaatcaactattgatttgtttttcattaaag 6519086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 21375647 - 21375694
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  21375647 attttaccaaattatcctaatcacctatttgtttgtttttcattaaag 21375694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 26660910 - 26660863
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||    
T  26660910 attttaccaaattctcttaatcaactattggtttgtttttcattaaag 26660863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 26932503 - 26932456
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||    
T  26932503 attttaccaaattctcttaatcaactattggtttgtttttcattaaag 26932456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 827
Target Start/End: Original strand, 29807311 - 29807350
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgttttt 827  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29807311 attttaccaaattatcctaatcaactattggtttgttttt 29807350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 42104060 - 42104107
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  42104060 attttaccaaattatcctaatcaactattgacttgtttttcattaaag 42104107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 42661937 - 42661984
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||    
T  42661937 attttaccaaattatcctaatcaactattagtttgttttttattaaag 42661984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 702 - 820
Target Start/End: Original strand, 43584298 - 43584416
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaatt 800  Q
    ||||||| || |||||||| | | || ||| | |||| ||||||||||||||||||||| || | |||| |||||||| | ||| |||||||||||||||    
T  43584298 atactccatccgttttaaagtaagtgtcgttttaggtgtttacacacatattaagaaatacaatgattaaaagaaagaga-atgattattttaccaaatt 43584396  T
Q  801 atcctaatcaactattggtt 820  Q
    ||||| || |||||||||||    
T  43584397 atccttattaactattggtt 43584416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 740 - 817
Target Start/End: Original strand, 9065611 - 9065687
Alignment:
Q  740 tttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattg 817  Q
    |||| ||| |||||||||||| ||||||||| |||||||| | || |||||||||| ||||||| |||||||||||||    
T  9065611 tttaaacatatattaagaaatacattaattaaaagaaagata-attttattttaccgaattatcataatcaactattg 9065687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 784 - 835
Target Start/End: Original strand, 7748891 - 7748942
Alignment:
Q  784 tgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||||||||||| ||||| || |||||||||||||||||||||||    
T  7748891 tgttatattaccaaattattctaattaattattggtttgtttttcattaaag 7748942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 13761876 - 13761829
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  13761876 attttacaaaattatcttaatcaactattggtttatttttcattaaag 13761829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 735 - 818
Target Start/End: Original strand, 25362755 - 25362838
Alignment:
Q  735 aggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattgg 818  Q
    |||| |||||||||||||||||||||||| | |||| |||||||| |   ||| |||||||||| |||||| || |||||||||    
T  25362755 aggtgtttacacacatattaagaaatgcaatgattaaaagaaagagaatggttgttttaccaaaatatccttattaactattgg 25362838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 34972647 - 34972694
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||    
T  34972647 attttaccaaattatcctaatcaactattaatttgttttttattaaag 34972694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 39504881 - 39504834
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |||||    
T  39504881 attttaccaaattattctaatcaactattagtttgtttttcaataaag 39504834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 735 - 826
Target Start/End: Original strand, 35765853 - 35765946
Alignment:
Q  735 aggtttttacacacatattaagaaa--tgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttt 826  Q
    |||| |||||||||||||||| |||  |||| | |||| |||||||| |   ||||||||||||||||||||| || ||||||||||| |||||    
T  35765853 aggtgtttacacacatattaaaaaaaatgcaatgattaaaagaaagagaatggttattttaccaaattatccttattaactattggttagtttt 35765946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 703 - 779
Target Start/End: Complemental strand, 4631160 - 4631084
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaaga 779  Q
    ||||||||| |||| ||||||| || ||| | |||| ||||||||||||||||||||| || | |||| ||||||||    
T  4631160 tactccctccgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatacaatgattaaaagaaaga 4631084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 4425130 - 4425083
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| |||||| |||| | |||||||||||||||||    
T  4425130 attttaccaaattatcttaatcatctatcgatttgtttttcattaaag 4425083  T

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Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 751 - 826
Target Start/End: Complemental strand, 7317210 - 7317135
Alignment:
Q  751 attaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttt 826  Q
    ||||||||||||| | |||| |||||||| |   ||||||||||||||||||||| || |||||||| || |||||    
T  7317210 attaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattatccttattaactattgattagtttt 7317135  T

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Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 14620491 - 14620538
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| ||||||||| ||||||| |||||||||||||||||| ||||    
T  14620491 attttatcaaattatcttaatcaattattggtttgtttttcatcaaag 14620538  T

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Target: scaffold0565 (Bit Score: 82; Significance: 3e-38; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 702 - 835
Target Start/End: Original strand, 9866 - 9999
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    |||||| ||| |||| |||||||||| ||| ||| ||||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||||||||||    
T  9866 atactcgctctgtttcaaaatgaatgtcgtttaaagtttttacacatatattaaaaaatgcattaattaaaagaaaaaaagatgttattttaccaaatta 9965  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    || |||||||||||| ||||||||||| ||||||    
T  9966 tcttaatcaactattagtttgtttttccttaaag 9999  T

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Target: scaffold0565; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 9639 - 9686
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||||    
T  9639 attttaccaaattatcataatcaactattgagttgtttttcattaaag 9686  T

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Target: scaffold0300 (Bit Score: 68; Significance: 7e-30; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 4793 - 4673
Alignment:
Q  713 gttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaac 812  Q
    |||||||||| |||| ||| |||  |||||||||||||||||||||||||||||| || || |||  ||||||||||||||||||| |||||||||||||    
T  4793 gttttaaaataaatgtcgtttaaaatttttacacacatattaagaaatgcattaactaaaaaaaa--aagatgttattttaccaaactatcctaatcaac 4696  T
Q  813 tattggtttgtttttcattaaag 835  Q
    ||||| ||||||||| |||||||    
T  4695 tattgatttgttttttattaaag 4673  T

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Target: scaffold0136 (Bit Score: 68; Significance: 7e-30; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 710 - 835
Target Start/End: Complemental strand, 9775 - 9653
Alignment:
Q  710 tcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatc 809  Q
    ||||||| || || |||| ||| |||||||||| ||||||||||||||||| ||||||||| || ||    |||||||||||||| ||||||||||||||    
T  9775 tcagtttcaagataaatgtcgtttaaggtttttgcacacatattaagaaatacattaattaaaaaaat---agatgttattttactaaattatcctaatc 9679  T
Q  810 aactattggtttgtttttcattaaag 835  Q
    ||||||||||||||||||||||||||    
T  9678 aactattggtttgtttttcattaaag 9653  T

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Target: scaffold0026 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 702 - 835
Target Start/End: Complemental strand, 4382 - 4249
Alignment:
Q  702 atactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaatta 801  Q
    |||||| ||| ||||||||||||||   || ||||||||||||||||||||||||||||  |||||  | |||||| | |||| ||||||||||||||||    
T  4382 atactctctccgttttaaaatgaattttgtttaaggtttttacacacatattaagaaatatattaaagaaaagaaatatagatattattttaccaaatta 4283  T
Q  802 tcctaatcaactattggtttgtttttcattaaag 835  Q
    |||| ||||||||||  ||||||||| |||||||    
T  4282 tccttatcaactattaatttgttttttattaaag 4249  T

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Target: scaffold0983 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 718 - 835
Target Start/End: Original strand, 615 - 731
Alignment:
Q  718 aaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattg 817  Q
    |||||||||| ||| |||| |||||||||| || ||||||||| |||| ||||  | ||| | ||||||||||||||||||||||| |||||||||||||    
T  615 aaaatgaatgtcgtttaagatttttacacatatgttaagaaatacatttattaataaaaa-agagatgttattttaccaaattatcttaatcaactattg 713  T
Q  818 gtttgtttttcattaaag 835  Q
     | |||||||||||||||    
T  714 atatgtttttcattaaag 731  T

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Target: scaffold0332 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 703 - 826
Target Start/End: Original strand, 3733 - 3856
Alignment:
Q  703 tactccctcagttttaaaatgaatgacgtctaaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatg-ttattttaccaaatta 801  Q
    |||||| || |||||||||||| || ||| | |||| |||||||||||| ||||||||||| | |||| |||||||||| ||| ||||||||||||||||    
T  3733 tactccttccgttttaaaatgagtgtcgttttaggtctttacacacataataagaaatgcaatgattaaaagaaagaaa-atgattattttaccaaatta 3831  T
Q  802 tcctaatcaactattggtttgtttt 826  Q
    |||| || | ||||||||| |||||    
T  3832 tccttattagctattggttagtttt 3856  T

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Target: scaffold0182 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 772 - 835
Target Start/End: Original strand, 18236 - 18299
Alignment:
Q  772 aagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||||||| ||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  18236 aagaaagaaaaatgttattttatcaaattattttaatcaactattggtttgtttttcattaaag 18299  T

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Target: scaffold0015 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 788 - 834
Target Start/End: Original strand, 21078 - 21124
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21078 attttaccaaattatcctaatcaactattggtttgtttttcattaaa 21124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 3501 - 3548
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  3501 attttatcaaattatcctaatcaactattggtttgtttttcattaaag 3548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Original strand, 24737 - 24784
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24737 attttaccaaactatcctaatcaactattggtttgtttttcattaaag 24784  T

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Target: scaffold0048 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 788 - 835
Target Start/End: Complemental strand, 62789 - 62742
Alignment:
Q  788 attttaccaaattatcctaatcaactattggtttgtttttcattaaag 835  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  62789 attttaccaaattgtcctaatcaactattggtttgtttttcattaaag 62742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 772 - 834
Target Start/End: Original strand, 553 - 615
Alignment:
Q  772 aagaaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaa 834  Q
    |||||||| |||| |||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  553 aagaaagagagatattattttaccaaattatcataatcaactattgatttctttttcattaaa 615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 733 - 821
Target Start/End: Complemental strand, 153517 - 153429
Alignment:
Q  733 taaggtttttacacacatattaagaaatgcattaattacaagaaagaaagatgttattttaccaaattatcctaatcaactattggttt 821  Q
    ||||||||||||||| ||||||||||||||| | | || |||||||| |    |||||||| ||||||||||| || ||||||||||||    
T  153517 taaggtttttacacatatattaagaaatgcaatgactagaagaaagagaataattattttatcaaattatcctcattaactattggttt 153429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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