View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2926_high_33 (Length: 326)
Name: NF2926_high_33
Description: NF2926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2926_high_33 |
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Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 15 - 308
Target Start/End: Original strand, 25897143 - 25897436
Alignment:
| Q |
15 |
gacatggaatcataaatgaactgaatttgcaatcagcagatcttgattgttcgatgaaaatttaacaactcatattccgactttgccaattcgaataaaa |
114 |
Q |
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| T |
25897143 |
gacatggaaccataaatgaactgaattcgcaatcagcagatcttgattgttcgatgaaaatttaacaactcatattccgactttgccaattcgaataaaa |
25897242 |
T |
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| Q |
115 |
tttgtatgattttcttttaacaattgagattcggctaattttcatccaacagttgaatttgtgattgttataactcatacttcatagattccattttcaa |
214 |
Q |
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| T |
25897243 |
tttgtatgattttcttttaacaattgagattcggctaattttcatccaatagttgaatttgtgattgttataactcatacttcatagattccattttcaa |
25897342 |
T |
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| Q |
215 |
agttaacaaatctcaaaaggatagaatgaatcatattctgaatttgtaaaaccgaattcgcaatcaacagatctcgattgttgaatgaaaatcg |
308 |
Q |
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| T |
25897343 |
agttaacaaatctcaaaaggatagaatgaatcatattctgaatttgtaaaaccgaattcgcaatcaacagatctcgattgttgaatgaaaatcg |
25897436 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 25897504 - 25897556
Alignment:
| Q |
165 |
agttgaatttgtgattgttataactcatacttcatagattccattttcaaagt |
217 |
Q |
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| T |
25897504 |
agttgaatctatgattgttggaacacatacttcaaagattccattttcaaagt |
25897556 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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