View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2926_high_49 (Length: 259)
Name: NF2926_high_49
Description: NF2926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2926_high_49 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 28849923 - 28849683
Alignment:
| Q |
19 |
ccgcccacactcacacacctccggcatccatccatcaatggcagacaacaaaaagcgccgccgtacagaaccaaccgacgaaatcctccccttcaaaaac |
118 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28849923 |
ccgcccacactcacacacctccggcatccatccatctatggcagacaacaaaaagcgccgccgtacagaaccaaccgacgaaatcctccccttcaaaaac |
28849824 |
T |
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| Q |
119 |
aaactcaaaccagactccatcatcctcgaaatcctcaaaaacctaaaagcctcaaccgcatcttcttccggaaccaaaaccctaaccctcgacgaactct |
218 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28849823 |
aaactcaaaccagactcgatcatcctcgaaatcctcaaaaacctaaaagcctcaaccgcatcttcttccggaaccaaaaccctaaccctcgacgaactct |
28849724 |
T |
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| Q |
219 |
cactccctttcacctgccgcgaagtagcggatctctccctc |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
28849723 |
cactccctttcacctgccgcgaagtagcggatctctccctc |
28849683 |
T |
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