View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2926_high_70 (Length: 239)
Name: NF2926_high_70
Description: NF2926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2926_high_70 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 1378210 - 1377983
Alignment:
| Q |
1 |
ctcattattggactgattaagaacacaacac--gaggttgtgattcttttaaataaactataggatatgattgaagagtgcattgggtgcatgcagtcca |
98 |
Q |
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| T |
1378210 |
ctcattattggactgattaagaacacaacacatgaggttgtgattcttttaaataaactataggatatgattgaagagtgcattgggtgcatgcagtcca |
1378111 |
T |
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| Q |
99 |
tatctagatttgaagatccagaataatataattaattaatgttagttaagccatggtcacgtatacgcacaatagatgctttataggatgtacgtgtgtc |
198 |
Q |
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| T |
1378110 |
tatctagatttgaagatccagaataatataattaattaatgttagttaagccatgatcacgtatacgcacaatagatgctttataggatgtacgtgtgtc |
1378011 |
T |
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| Q |
199 |
ttaggataatactgttaagatggaaatt |
226 |
Q |
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||||||||||| |||||||||||||||| |
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| T |
1378010 |
ttaggataatattgttaagatggaaatt |
1377983 |
T |
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