View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2926_low_56 (Length: 264)
Name: NF2926_low_56
Description: NF2926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2926_low_56 |
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Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 43073597 - 43073832
Alignment:
| Q |
14 |
tgtgctctgaactagctcccaggattattgacttcttgtgtccattagcacagtcaccagcaaacctcggaaaaccccataattttcggcctatgcaggt |
113 |
Q |
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| T |
43073597 |
tgtgctctgaactagctcccaggattgttgacttcttgtgtccattagcacagtcaccagcaaacctcggaaaaccccataattttcggcctatgcaggt |
43073696 |
T |
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| Q |
114 |
gcagtaacatagttaattacacaaagaggaagagtgaaggttcaaataaacgaataacaaggtccaaagtcttcaagaatcaagaaagttaaatcaaacc |
213 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43073697 |
gcagtaacatagttaattacacaaagagtaagagtgaaggttcaaataaacgaataacaaggtccaaagtcttcaagaatcaagaaagttaaatcaaacc |
43073796 |
T |
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| Q |
214 |
atgtcatcctacaacctttatgttcagacttcagat |
249 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
43073797 |
atgtcatcctacaacctttatgttcagacttcagat |
43073832 |
T |
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