View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2926_low_79 (Length: 240)
Name: NF2926_low_79
Description: NF2926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2926_low_79 |
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Alignment Details
Target: chr6 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 6730969 - 6731201
Alignment:
| Q |
1 |
atgaatatttctgaaagcaaccactataaaaatccttgtacttgcatggagactatttaagtagtggctgccaacatgaaacttgcttttcatgacttgg |
100 |
Q |
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| T |
6730969 |
atgaatatttctgaaagcaaccactataaaaatccttgtacttgcatggagactatttaagtagtggctgccaacatgaaacttgcttttcatgacttgg |
6731068 |
T |
|
| Q |
101 |
gattattcaatctcctcacgacaagttgtgtgttatttgctttcaacaagatgacgatgtctgtcaacattttcaacttgtaagttctcttttacaatat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
6731069 |
gattattcaatctcctcacgacaagttgtgtgttatttgctttcaacaagatgacgatgtctgtcaacattttcaacttgtaagttctctttttcaatat |
6731168 |
T |
|
| Q |
201 |
ggttggacattgtaggtgtttttcatgatgatg |
233 |
Q |
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|||||| |||||||||||||||||||||||||| |
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| T |
6731169 |
ggttgggcattgtaggtgtttttcatgatgatg |
6731201 |
T |
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