View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2927_high_7 (Length: 254)

Name: NF2927_high_7
Description: NF2927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2927_high_7
NF2927_high_7
[»] chr8 (49 HSPs)
chr8 (17-153)||(44904174-44904310)
chr8 (67-153)||(44897911-44897997)
chr8 (159-236)||(22221388-22221466)
chr8 (159-236)||(22227730-22227808)
chr8 (156-236)||(5513978-5514058)
chr8 (155-237)||(10007786-10007869)
chr8 (160-240)||(10006344-10006425)
chr8 (160-240)||(22220388-22220469)
chr8 (161-240)||(18979140-18979220)
chr8 (151-235)||(24122874-24122958)
chr8 (159-239)||(32207346-32207425)
chr8 (169-240)||(18978029-18978100)
chr8 (159-240)||(12353381-12353461)
chr8 (169-236)||(18970920-18970987)
chr8 (159-236)||(12351920-12351998)
chr8 (163-233)||(29968364-29968434)
chr8 (165-240)||(1824098-1824174)
chr8 (165-240)||(1858543-1858619)
chr8 (159-234)||(1823551-1823627)
chr8 (159-234)||(1857996-1858072)
chr8 (158-241)||(32968454-32968538)
chr8 (109-153)||(44905747-44905791)
chr8 (109-153)||(44948218-44948262)
chr8 (159-236)||(5003121-5003198)
chr8 (163-240)||(11287779-11287857)
chr8 (160-241)||(32973955-32974037)
chr8 (159-240)||(38980064-38980146)
chr8 (159-240)||(39011161-39011243)
chr8 (159-240)||(8388463-8388543)
chr8 (160-225)||(23170034-23170098)
chr8 (160-240)||(38974795-38974876)
chr8 (160-240)||(39005893-39005974)
chr8 (160-235)||(30336526-30336602)
chr8 (177-236)||(24488703-24488762)
chr8 (160-216)||(24483143-24483200)
chr8 (159-239)||(45114537-45114618)
chr8 (158-236)||(5514294-5514372)
chr8 (157-206)||(11288914-11288964)
chr8 (158-215)||(11456636-11456694)
chr8 (159-240)||(43661843-43661925)
chr8 (159-235)||(30335638-30335715)
chr8 (18-66)||(44898014-44898063)
chr8 (158-235)||(8389714-8389792)
chr8 (160-237)||(11283232-11283310)
chr8 (158-235)||(24123923-24123998)
chr8 (162-235)||(29043400-29043474)
chr8 (158-236)||(30568885-30568963)
chr8 (160-225)||(36249552-36249618)
chr8 (160-212)||(3819489-3819541)
[»] chr5 (32 HSPs)
chr5 (159-240)||(19752911-19752992)
chr5 (158-240)||(16650875-16650958)
chr5 (160-236)||(25056405-25056482)
chr5 (158-240)||(18486922-18487005)
chr5 (158-236)||(25523067-25523146)
chr5 (158-240)||(28538674-28538757)
chr5 (159-237)||(36486511-36486590)
chr5 (157-240)||(19754150-19754235)
chr5 (163-237)||(28539843-28539917)
chr5 (160-236)||(22940646-22940723)
chr5 (156-240)||(25055408-25055493)
chr5 (158-234)||(5777899-5777974)
chr5 (157-236)||(33160310-33160390)
chr5 (149-234)||(5778862-5778948)
chr5 (159-236)||(33158097-33158175)
chr5 (160-240)||(20214196-20214276)
chr5 (157-240)||(40255692-40255776)
chr5 (159-237)||(18485137-18485216)
chr5 (160-236)||(1796054-1796131)
chr5 (157-239)||(25524148-25524232)
chr5 (158-245)||(5730439-5730528)
chr5 (157-236)||(18154491-18154570)
chr5 (158-240)||(20216783-20216866)
chr5 (163-241)||(24332916-24332995)
chr5 (162-240)||(36485302-36485381)
chr5 (150-236)||(21835031-21835117)
chr5 (163-237)||(42195137-42195210)
chr5 (177-240)||(7311608-7311671)
chr5 (180-233)||(34893686-34893739)
chr5 (153-216)||(15204287-15204350)
chr5 (178-235)||(2685763-2685820)
chr5 (163-235)||(2186774-2186846)
[»] chr1 (47 HSPs)
chr1 (156-236)||(14999281-14999361)
chr1 (160-240)||(39699787-39699867)
chr1 (158-240)||(24422798-24422881)
chr1 (159-237)||(52274967-52275046)
chr1 (151-236)||(35594208-35594293)
chr1 (152-236)||(45149995-45150079)
chr1 (159-243)||(45157226-45157310)
chr1 (158-241)||(43058784-43058867)
chr1 (160-240)||(51684366-51684447)
chr1 (160-241)||(39222492-39222575)
chr1 (159-234)||(52827346-52827422)
chr1 (158-240)||(11437219-11437302)
chr1 (159-240)||(11436041-11436123)
chr1 (157-235)||(50680329-50680407)
chr1 (163-235)||(24426100-24426173)
chr1 (158-237)||(23980489-23980569)
chr1 (157-236)||(7674525-7674603)
chr1 (159-236)||(33088641-33088719)
chr1 (160-234)||(41364829-41364903)
chr1 (158-240)||(35595211-35595296)
chr1 (160-236)||(36613928-36614005)
chr1 (160-236)||(45148581-45148657)
chr1 (157-240)||(35067022-35067106)
chr1 (157-236)||(7983047-7983126)
chr1 (158-236)||(43060030-43060109)
chr1 (158-236)||(51685789-51685868)
chr1 (163-240)||(37526897-37526975)
chr1 (159-239)||(39698562-39698643)
chr1 (163-236)||(43378737-43378810)
chr1 (159-234)||(41366156-41366232)
chr1 (163-241)||(39153135-39153214)
chr1 (155-237)||(50681627-50681710)
chr1 (159-232)||(14999983-15000057)
chr1 (159-240)||(44404441-44404523)
chr1 (156-240)||(12390001-12390086)
chr1 (155-240)||(25652710-25652795)
chr1 (158-234)||(52828096-52828173)
chr1 (157-236)||(7675483-7675562)
chr1 (155-235)||(16290088-16290170)
chr1 (173-236)||(39151945-39152008)
chr1 (160-212)||(33739094-33739146)
chr1 (160-235)||(33088068-33088143)
chr1 (158-228)||(52276195-52276266)
chr1 (159-207)||(36612852-36612901)
chr1 (159-205)||(39221357-39221405)
chr1 (163-235)||(45156052-45156125)
chr1 (160-240)||(46066525-46066604)
[»] chr4 (46 HSPs)
chr4 (157-236)||(49308051-49308130)
chr4 (154-240)||(17388231-17388317)
chr4 (158-236)||(26421646-26421724)
chr4 (156-240)||(17382989-17383073)
chr4 (158-236)||(1835126-1835205)
chr4 (160-240)||(1834119-1834200)
chr4 (162-235)||(19750600-19750673)
chr4 (162-235)||(19789133-19789206)
chr4 (158-240)||(1290218-1290301)
chr4 (159-237)||(31599788-31599867)
chr4 (160-236)||(31601009-31601086)
chr4 (158-234)||(5526152-5526228)
chr4 (159-234)||(5525359-5525434)
chr4 (159-234)||(14868889-14868964)
chr4 (159-234)||(14876970-14877045)
chr4 (163-240)||(8758857-8758935)
chr4 (158-236)||(13509383-13509461)
chr4 (158-234)||(25685848-25685925)
chr4 (158-234)||(48780246-48780323)
chr4 (158-240)||(1963194-1963277)
chr4 (159-241)||(3928877-3928960)
chr4 (158-237)||(8757673-8757752)
chr4 (160-234)||(10471414-10471489)
chr4 (160-234)||(25684934-25685009)
chr4 (163-236)||(12129626-12129700)
chr4 (159-234)||(13386558-13386635)
chr4 (159-219)||(10470545-10470606)
chr4 (148-240)||(52491627-52491720)
chr4 (163-240)||(8155741-8155818)
chr4 (158-234)||(13386012-13386090)
chr4 (158-236)||(21177995-21178073)
chr4 (158-236)||(49306773-49306851)
chr4 (158-240)||(55603551-55603633)
chr4 (159-237)||(3927665-3927744)
chr4 (158-235)||(1289095-1289173)
chr4 (163-240)||(35935553-35935631)
chr4 (153-243)||(37728582-37728672)
chr4 (163-240)||(35934347-35934423)
chr4 (160-236)||(50909697-50909774)
chr4 (158-241)||(10448279-10448363)
chr4 (160-237)||(1964464-1964542)
chr4 (157-235)||(50909270-50909348)
chr4 (159-207)||(48781098-48781147)
chr4 (163-235)||(55602379-55602451)
chr4 (170-236)||(21539095-21539162)
chr4 (160-235)||(10447006-10447083)
[»] chr3 (56 HSPs)
chr3 (157-239)||(7268848-7268930)
chr3 (159-240)||(54540810-54540892)
chr3 (148-240)||(47614173-47614266)
chr3 (153-240)||(29931219-29931307)
chr3 (153-240)||(29980373-29980461)
chr3 (158-240)||(7758400-7758483)
chr3 (158-240)||(7267642-7267724)
chr3 (158-236)||(12700173-12700250)
chr3 (157-243)||(19984846-19984933)
chr3 (150-240)||(22776832-22776923)
chr3 (150-240)||(12703520-12703610)
chr3 (159-240)||(24516459-24516541)
chr3 (156-240)||(28262189-28262273)
chr3 (158-240)||(534497-534580)
chr3 (161-240)||(8456479-8456558)
chr3 (159-236)||(29932723-29932800)
chr3 (159-236)||(29981877-29981954)
chr3 (159-236)||(54539754-54539832)
chr3 (158-235)||(5029708-5029785)
chr3 (158-234)||(47609695-47609772)
chr3 (159-240)||(55192015-55192096)
chr3 (158-230)||(11671371-11671443)
chr3 (151-234)||(47610606-47610690)
chr3 (158-234)||(51470481-51470557)
chr3 (157-234)||(5001197-5001275)
chr3 (156-237)||(51038813-51038895)
chr3 (158-217)||(47615591-47615651)
chr3 (160-240)||(51037536-51037616)
chr3 (152-240)||(18442622-18442712)
chr3 (152-240)||(19487696-19487786)
chr3 (158-241)||(19986089-19986175)
chr3 (160-234)||(51469972-51470047)
chr3 (160-233)||(49216247-49216321)
chr3 (159-235)||(46721245-46721322)
chr3 (160-236)||(52840628-52840705)
chr3 (160-235)||(535807-535883)
chr3 (173-237)||(34019168-34019232)
chr3 (160-235)||(46719941-46720017)
chr3 (157-240)||(52276301-52276385)
chr3 (160-240)||(53901408-53901487)
chr3 (160-240)||(18456083-18456165)
chr3 (158-240)||(28263131-28263214)
chr3 (158-240)||(52281567-52281650)
chr3 (150-240)||(53614809-53614900)
chr3 (173-235)||(6170286-6170348)
chr3 (167-213)||(22775783-22775829)
chr3 (159-235)||(52839036-52839113)
chr3 (183-235)||(6249633-6249685)
chr3 (163-237)||(34940210-34940284)
chr3 (163-241)||(54987026-54987103)
chr3 (158-240)||(8875904-8875987)
chr3 (186-235)||(31645000-31645049)
chr3 (160-215)||(8338940-8338996)
chr3 (173-237)||(11670398-11670462)
chr3 (159-215)||(26633360-26633416)
chr3 (163-215)||(34296626-34296678)
[»] chr2 (37 HSPs)
chr2 (151-236)||(36449769-36449855)
chr2 (157-236)||(18797243-18797324)
chr2 (157-240)||(38840513-38840597)
chr2 (160-240)||(18299373-18299454)
chr2 (153-241)||(802610-802698)
chr2 (156-236)||(18300748-18300827)
chr2 (158-237)||(18904365-18904445)
chr2 (159-238)||(22848190-22848270)
chr2 (158-240)||(7899902-7899985)
chr2 (158-240)||(18906007-18906090)
chr2 (158-240)||(36450941-36451023)
chr2 (159-240)||(24475224-24475305)
chr2 (157-240)||(7898688-7898772)
chr2 (158-236)||(18868922-18869001)
chr2 (159-239)||(11257621-11257701)
chr2 (159-235)||(11258836-11258913)
chr2 (160-240)||(41878092-41878175)
chr2 (158-240)||(38839240-38839323)
chr2 (152-225)||(11938823-11938897)
chr2 (159-240)||(22587974-22588055)
chr2 (158-235)||(23869560-23869637)
chr2 (158-235)||(41879237-41879315)
chr2 (179-240)||(32739643-32739704)
chr2 (160-234)||(1034495-1034570)
chr2 (161-240)||(13030293-13030370)
chr2 (163-237)||(8534586-8534660)
chr2 (163-236)||(13567975-13568049)
chr2 (159-217)||(21837298-21837355)
chr2 (155-236)||(24476868-24476948)
chr2 (163-236)||(28617926-28617999)
chr2 (161-212)||(1033212-1033263)
chr2 (158-236)||(16446152-16446231)
chr2 (163-215)||(13830270-13830322)
chr2 (159-237)||(13570580-13570659)
chr2 (187-241)||(810800-810854)
chr2 (154-212)||(21837064-21837121)
chr2 (150-241)||(26545540-26545632)
[»] chr7 (37 HSPs)
chr7 (158-240)||(7501872-7501955)
chr7 (160-240)||(31659622-31659704)
chr7 (159-240)||(7500454-7500535)
chr7 (160-240)||(18371424-18371505)
chr7 (152-234)||(17782579-17782662)
chr7 (165-238)||(14999177-14999249)
chr7 (158-234)||(127335-127411)
chr7 (173-240)||(18372477-18372544)
chr7 (158-240)||(22630472-22630555)
chr7 (158-233)||(34174010-34174085)
chr7 (158-234)||(3227620-3227697)
chr7 (162-234)||(17781663-17781736)
chr7 (158-240)||(42886306-42886389)
chr7 (160-234)||(47525393-47525468)
chr7 (156-237)||(11658375-11658457)
chr7 (161-234)||(3227109-3227182)
chr7 (158-234)||(31949320-31949397)
chr7 (160-236)||(48934927-48935004)
chr7 (151-234)||(31949828-31949912)
chr7 (159-231)||(20163585-20163658)
chr7 (163-234)||(128627-128699)
chr7 (157-236)||(21505413-21505491)
chr7 (167-233)||(47524532-47524599)
chr7 (157-240)||(22629480-22629567)
chr7 (163-240)||(11662571-11662649)
chr7 (159-240)||(47369780-47369862)
chr7 (159-235)||(31661034-31661111)
chr7 (158-241)||(597303-597383)
chr7 (160-238)||(769413-769492)
chr7 (157-217)||(14998005-14998067)
chr7 (183-238)||(43899470-43899525)
chr7 (158-217)||(46483551-46483610)
chr7 (159-240)||(20636841-20636923)
chr7 (159-240)||(39182157-39182238)
chr7 (159-215)||(27869195-27869252)
chr7 (178-235)||(34351511-34351568)
chr7 (150-241)||(34352805-34352897)
[»] chr6 (29 HSPs)
chr6 (158-236)||(16704521-16704600)
chr6 (163-240)||(1829623-1829701)
chr6 (157-240)||(10784589-10784674)
chr6 (155-235)||(27322093-27322173)
chr6 (157-240)||(7316314-7316398)
chr6 (149-234)||(8822819-8822905)
chr6 (159-219)||(3721611-3721672)
chr6 (158-234)||(3722533-3722610)
chr6 (158-234)||(8659263-8659340)
chr6 (158-234)||(8821871-8821948)
chr6 (155-234)||(34834605-34834685)
chr6 (158-240)||(14822358-14822441)
chr6 (160-236)||(7314880-7314956)
chr6 (163-240)||(26575074-26575150)
chr6 (157-234)||(27318312-27318389)
chr6 (159-234)||(8660230-8660305)
chr6 (158-235)||(6842308-6842386)
chr6 (173-235)||(10785938-10786000)
chr6 (157-236)||(27437825-27437905)
chr6 (158-240)||(17496791-17496878)
chr6 (157-240)||(14823595-14823680)
chr6 (158-230)||(26574617-26574690)
chr6 (161-236)||(12382735-12382811)
chr6 (160-240)||(16703570-16703648)
chr6 (160-238)||(3333149-3333227)
chr6 (150-240)||(30495718-30495807)
chr6 (162-217)||(26717127-26717183)
chr6 (150-235)||(3333051-3333137)
chr6 (183-235)||(26949210-26949259)
[»] scaffold0320 (1 HSPs)
scaffold0320 (158-236)||(19486-19565)
[»] scaffold0302 (2 HSPs)
scaffold0302 (158-240)||(17468-17551)
scaffold0302 (160-240)||(18796-18877)
[»] scaffold0294 (2 HSPs)
scaffold0294 (158-236)||(5462-5541)
scaffold0294 (158-235)||(4440-4518)
[»] scaffold0019 (2 HSPs)
scaffold0019 (160-236)||(60090-60167)
scaffold0019 (161-240)||(61479-61559)
[»] scaffold1303 (1 HSPs)
scaffold1303 (157-236)||(1436-1516)
[»] scaffold0632 (1 HSPs)
scaffold0632 (158-237)||(3331-3410)
[»] scaffold0093 (2 HSPs)
scaffold0093 (161-240)||(2485-2564)
scaffold0093 (161-240)||(7108-7187)
[»] scaffold0283 (1 HSPs)
scaffold0283 (109-153)||(4197-4241)
[»] scaffold0186 (2 HSPs)
scaffold0186 (150-232)||(23071-23152)
scaffold0186 (158-231)||(23919-23993)
[»] scaffold0227 (1 HSPs)
scaffold0227 (160-240)||(139-220)
[»] scaffold0112 (1 HSPs)
scaffold0112 (160-240)||(37148-37228)
[»] scaffold0059 (2 HSPs)
scaffold0059 (161-241)||(4749-4829)
scaffold0059 (179-235)||(3695-3751)
[»] scaffold0045 (1 HSPs)
scaffold0045 (160-235)||(49109-49185)
[»] scaffold0003 (1 HSPs)
scaffold0003 (157-236)||(49457-49537)
[»] scaffold2034 (1 HSPs)
scaffold2034 (160-237)||(233-311)
[»] scaffold0586 (1 HSPs)
scaffold0586 (149-240)||(9046-9137)
[»] scaffold0369 (1 HSPs)
scaffold0369 (150-235)||(13183-13267)
[»] scaffold0049 (1 HSPs)
scaffold0049 (150-236)||(7439-7526)


Alignment Details
Target: chr8 (Bit Score: 133; Significance: 3e-69; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 44904174 - 44904310
Alignment:
Q  17 cacctggaaagccatcattagcaccttgaattcagaagaatctctgcttgattattttatgagtaatcatcttcacagtagcaccacaatggcattttgt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44904174 cacctggaaagccatcattagcaccttgaattcagaagaatctctgcttgattattttatgattaatcatcttcacagtagcaccacaatggcattttgt 44904273  T
Q  117 aaggcatgattcaaacctcaacttagttgagttataa 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  44904274 aaggcatgattcaaacctcaacttagttgagttataa 44904310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 44897997 - 44897911
Alignment:
Q  67 attattttatgagtaatcatcttcacagtagcaccacaatggcattttgtaaggcatgattcaaacctcaacttagttgagttataa 153  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44897997 attattttatgagcaatcatcttcacagtagcaccacaatggcattttgtaaggcatgattcaaacgtcaacttagttgagttataa 44897911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 22221466 - 22221388
Alignment:
Q  159 aggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  22221466 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttg 22221388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 22227808 - 22227730
Alignment:
Q  159 aggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  22227808 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttg 22227730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 5513978 - 5514058
Alignment:
Q  156 tataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||    
T  5513978 tataggctaaagtgcacttttaccccctaactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttg 5514058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 10007869 - 10007786
Alignment:
Q  155 ttataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||| |||| ||||||||||    
T  10007869 ttataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttgg 10007786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 10006344 - 10006425
Alignment:
Q  160 ggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||| |||||||||||||    
T  10006344 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccc 10006425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 22220388 - 22220469
Alignment:
Q  160 ggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||| |||||||| |||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  22220388 ggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccc 22220469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 18979220 - 18979140
Alignment:
Q  161 gctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||| |||||||||| | |||||||||||| |||||||| |||||||||||||||||||||||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccc 18979140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 24122874 - 24122958
Alignment:
Q  151 taaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||  ||||||||||||||||||||||| |||||||| ||||||    
T  24122874 taaattttaggctaaagtgcatttttcccccctaactttaaaaaatttgcaattttgaccccctaagtacaaaaactataatttt 24122958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 32207425 - 32207346
Alignment:
Q  159 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcc 239  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||||| |||||||||||||||||||    
T  32207425 aggctaaagtgcacttt-cccccctaaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcc 32207346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 18978029 - 18978100
Alignment:
Q  169 gcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||    
T  18978029 gcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggccc 18978100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 12353461 - 12353381
Alignment:
Q  159 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||  ||||||| |||||||||||    
T  12353461 aggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagta-caaaactataattttggccc 12353381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 18970920 - 18970987
Alignment:
Q  169 gcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||    
T  18970920 gcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttg 18970987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 12351920 - 12351998
Alignment:
Q  159 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||| ||| ||||||| |||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  12351920 aggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttg 12351998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 29968434 - 29968364
Alignment:
Q  163 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatt 233  Q
    ||||||||||||||||||| ||||||| |||| |||||||||||| ||||||||||| |||||||||||||    
T  29968434 taaagtgcacttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaatt 29968364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 1824174 - 1824098
Alignment:
Q  165 aagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||  |||||||||| ||||||||||||||||||||    
T  1824174 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccc 1824098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 1858619 - 1858543
Alignment:
Q  165 aagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||  |||||||||| ||||||||||||||||||||    
T  1858619 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccc 1858543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 1823551 - 1823627
Alignment:
Q  159 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    ||||||||||| |||||| |||||| |||||| |||| |||||||||||||||| ||||||| ||||||||||||||    
T  1823551 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattt 1823627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 1857996 - 1858072
Alignment:
Q  159 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    ||||||||||| |||||| |||||| |||||| |||| |||||||||||||||| ||||||| ||||||||||||||    
T  1857996 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattt 1858072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 32968454 - 32968538
Alignment:
Q  158 taggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 241  Q
    ||||||||||||||||||||||| ||||||||||||||  |||| |||||| ||||| | |||| ||||| ||||||||||||||    
T  32968454 taggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccct 32968538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 44905747 - 44905791
Alignment:
Q  109 cattttgtaaggcatgattcaaacctcaacttagttgagttataa 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  44905747 cattttgtaaggcatgattcaaacctcaacttagttgagttataa 44905791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 44948262 - 44948218
Alignment:
Q  109 cattttgtaaggcatgattcaaacctcaacttagttgagttataa 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  44948262 cattttgtaaggcatgattcaaacctcaacttagttgagttataa 44948218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 5003198 - 5003121
Alignment:
Q  159 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagta-taaaaactacaattttg 236  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||||| | |||||||||| ||||||| |||||||||    
T  5003198 aggctaaagcgcacttt-cccccctaactttcaaaatcttgcaattttaaacccctaagtactaaaaaccacaattttg 5003121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 11287779 - 11287857
Alignment:
Q  163 taaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||| | ||||||||||| |||| |||||||||||| ||| ||||||| | ||||||||||||||||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccc 11287857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 32974037 - 32973955
Alignment:
Q  160 ggctaaagtgcactttt-cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 241  Q
    ||||||||||||||||| ||||||||||||||||||  |||| |||||| ||||| | |||| ||||| ||||||||||||||    
T  32974037 ggctaaagtgcactttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccct 32973955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 38980146 - 38980064
Alignment:
Q  159 aggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||| ||||||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  38980146 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 38980064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 39011243 - 39011161
Alignment:
Q  159 aggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||| ||||||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  39011243 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 39011161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 8388463 - 8388543
Alignment:
Q  159 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||| ||||||||||||| ||||  ||||||||||  ||||||| ||| |||||||| |||||||||||    
T  8388463 aggctaaagtgcacttt-cccccctaacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccc 8388543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 23170098 - 23170034
Alignment:
Q  160 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaa 225  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||||||| |||||||||| |||||    
T  23170098 ggctaaagtgca-ttttcccccctaattttcaaaaacttgcaattttgatcccctaagtacaaaaa 23170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 38974795 - 38974876
Alignment:
Q  160 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||| ||||||||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  38974795 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 38974876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 39005893 - 39005974
Alignment:
Q  160 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||| ||||||||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  39005893 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 39005974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 30336602 - 30336526
Alignment:
Q  160 ggctaaagtgcactt-ttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||||||| |||||||||||||||||||| |||  ||||||  || |||||||| |||||||||||||||    
T  30336602 ggctaaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaatttt 30336526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 24488762 - 24488703
Alignment:
Q  177 cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||| |||||||||||| |||||||| ||| ||||| |||||||||    
T  24488762 cccccctaactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaattttg 24488703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 24483143 - 24483200
Alignment:
Q  160 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaa 216  Q
    ||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||    
T  24483143 ggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggccccctaa 24483200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 45114618 - 45114537
Alignment:
Q  159 aggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcc 239  Q
    ||||| |||||||||||||| |||||||||||||||| ||||||||||||   | ||| ||| | |||||||||||||||||    
T  45114618 aggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttggttcactatgtacacaaactacaattttggcc 45114537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 5514372 - 5514294
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||||  ||||||| ||| |||| |||||||||||  ||  |||| || ||||||||||||||||    
T  5514372 taggctaaagtgcacttttatcccctaattttaaaaaacttgcaattttagccttctaaatacaaaaactacaattttg 5514294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 11288964 - 11288914
Alignment:
Q  157 ataggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaatttt 206  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||||||    
T  11288964 ataggctaaagtgcactttttcacccctaactttcaaaaacttgcaatttt 11288914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 11456636 - 11456694
Alignment:
Q  158 taggctaaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgacccccta 215  Q
    |||||||||||||||||||| |||||||| ||||||||  ||||||||||| |||||||    
T  11456636 taggctaaagtgcacttttctccccctaattttcaaaaatttgcaattttggcccccta 11456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 43661925 - 43661843
Alignment:
Q  159 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||| |||||||||||||| |||| |||||||||||  |||||||||| | || ||| ||| |||||||| |||||||||||    
T  43661925 aggctgaagtgcacttttccacccttaactttcaaaaagttgcaattttaatcctctatgtacaaaaactaaaattttggccc 43661843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 30335638 - 30335715
Alignment:
Q  159 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||||| |||||| |||| |||||| |||| |||||||||||| | | ||||||| ||||| |||||||||    
T  30335638 aggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaatttt 30335715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 44898063 - 44898014
Alignment:
Q  18 acctggaaagccatcattagcaccttg-aattcagaagaatctctgcttg 66  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||||    
T  44898063 acctggaaagccatcattagcacttcgaaattcagaagaatctctgcttg 44898014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 8389792 - 8389714
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||| |||||||||||||||||| || || ||||||||  |||||||||||  ||| || ||| |||||||||||||||    
T  8389792 taggttaaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaatttt 8389714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 11283310 - 11283232
Alignment:
Q  160 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    |||||||||||| ||| ||||||| |||||||||||  ||| ||||||  ||||||| |||||||||  ||||||||||    
T  11283310 ggctaaagtgcattttcccccccttaactttcaaaaagttgtaattttagccccctatgtataaaaatgacaattttgg 11283232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 24123998 - 24123923
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||| |||||  ||||| |||||||||||| |||||||||||| || | ||||||  |||| |||||||||    
T  24123998 taggctaaagtacactt--cccccgtaactttcaaaaacttgcaattttggcctcttaagtactaaaattacaatttt 24123923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 29043400 - 29043474
Alignment:
Q  162 ctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||| ||||||||| |||| ||| |||||||  | || |||||||||||||| ||| |||||||||||||||    
T  29043400 ctaaagttcacttttcctcccttaaccttcaaaaagtcgcgattttgaccccctatgtacaaaaactacaatttt 29043474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 30568885 - 30568963
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||| |||| |||| ||||||||  || ||||||||| | | || ||| |||||||| |||||||    
T  30568885 taggctaaagtgcactttccccctctaagtttcaaaaagttacaattttgatctcttaggtacaaaaactataattttg 30568963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 36249552 - 36249618
Alignment:
Q  160 ggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaa 225  Q
    ||||||||||||||||||||||| ||| ||||||||  ||||||||||| || |||| | |||||||    
T  36249552 ggctaaagtgcacttttccccccttaagtttcaaaaagttgcaattttggcctcctatgaataaaaa 36249618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 3819489 - 3819541
Alignment:
Q  160 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgacccc 212  Q
    |||||||||||| ||||||||| ||| ||||||||  ||||||||||| ||||    
T  3819489 ggctaaagtgcatttttcccccttaagtttcaaaatgttgcaattttggcccc 3819541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 19752911 - 19752992
Alignment:
Q  159 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  19752911 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccc 19752992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 16650958 - 16650875
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  16650958 taggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccc 16650875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 25056482 - 25056405
Alignment:
Q  160 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  25056482 ggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttg 25056405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 18487005 - 18486922
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||||||| |||| |||||||||||||    
T  18487005 taggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccc 18486922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 25523067 - 25523146
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||| ||||||||||||||||    
T  25523067 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttg 25523146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 28538674 - 28538757
Alignment:
Q  158 taggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| |||||| ||||||||||||||| ||||    
T  28538674 taggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccc 28538757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 36486590 - 36486511
Alignment:
Q  159 aggctaaagtgcactttt-cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    ||||| |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||    
T  36486590 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgg 36486511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 19754235 - 19754150
Alignment:
Q  157 ataggctaaagtgcactttt--cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||| ||||  |||||||||||||||||| |||||||||||| |||||||| || ||||||||||||||||||||    
T  19754235 ataggctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccc 19754150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 28539917 - 28539843
Alignment:
Q  163 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||||| ||||||| |||||||||||||||||    
T  28539917 taaagtgcatttttcccccctaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttgg 28539843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 22940723 - 22940646
Alignment:
Q  160 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||| ||||||||||    
T  22940723 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaattttg 22940646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 25055408 - 25055493
Alignment:
Q  156 tataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||||| |||||||| ||   ||||||||||||| |||||| ||||||||||||||||||||||||    
T  25055408 tataggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccc 25055493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 5777899 - 5777974
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||  ||||| |||||||    
T  5777899 taggctaaagtgcacttt-cccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 5777974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 33160390 - 33160310
Alignment:
Q  157 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||||||||||||| || |||||||| |||||||||||  ||||||||||||| ||||||||||||||    
T  33160390 ataggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttg 33160310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 5778948 - 5778862
Alignment:
Q  149 tataaattataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||  |||||||||||  ||||| |||||||    
T  5778948 tataaattgtaggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaattt 5778862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 33158097 - 33158175
Alignment:
Q  159 aggctaaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||| ||||  ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  33158097 aggctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttg 33158175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 20214196 - 20214276
Alignment:
Q  160 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||  | | ||| ||| ||||||||||||||||||||    
T  20214196 ggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggccc 20214276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 40255776 - 40255692
Alignment:
Q  157 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||| || || ||| |||| ||||||||||||||||||||| || | ||||||||||||||||||    
T  40255776 ataggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggccc 40255692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 18485137 - 18485216
Alignment:
Q  159 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    |||||||||||||||||| |||| |||||||| |||| |||||||||||| |||||||||||| ||||| ||||||||||    
T  18485137 aggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaattttgg 18485216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 1796054 - 1796131
Alignment:
Q  160 ggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||| |||||| |||||||||||||||| ||||||| |||| || |||||||| ||||||||||||||||    
T  1796054 ggctaaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaattttg 1796131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 25524232 - 25524148
Alignment:
Q  157 ataggctaaagtgcacttttcccccc--taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcc 239  Q
    ||||||||||||||||||||||||||  ||| ||| ||||  ||| ||||||| ||||||||||| |||||||||||||||||||    
T  25524232 ataggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaattttggcc 25524148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 245
Target Start/End: Original strand, 5730439 - 5730528
Alignment:
Q  158 taggctaaagtgcacttttcccccc--taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccctttgc 245  Q
    |||||||||||||||||||||||||  |||||||||||| |||||||||||| |  ||||||||  ||||| ||||||| | ||||||||    
T  5730439 taggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaatttagcccctttgc 5730528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 18154491 - 18154570
Alignment:
Q  157 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||| ||||||  ||||| ||||||||||| ||| ||||||||| |||||||||| ||||||||||||||||    
T  18154491 ataggctaaagtgaacttttttccccttaactttcaaaaacttacaattttga-cccctaagtacaaaaactacaattttg 18154570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 20216866 - 20216783
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||| ||||||||||||||||||||| || |||||||| |||||||||||  | |||||  || ||||||||||||||||||||    
T  20216866 taggttaaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggccc 20216783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 24332916 - 24332995
Alignment:
Q  163 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 241  Q
    |||||||||||||| |||||| || |||||||| |||||||||||| |||| || ||| |||||||||||||||| ||||    
T  24332916 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccct 24332995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 36485302 - 36485381
Alignment:
Q  162 ctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||| |||||| ||||||||||| |||| ||| ||||||||||| | |||||| |||||||| |||||||||||    
T  36485302 ctaaagtgcatttttccacccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggccc 36485381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 21835031 - 21835117
Alignment:
Q  150 ataaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||| || ||||||||||||||||| |||| |||| ||| ||||  |||  |||||||||||||| ||| ||||||||||||||||    
T  21835031 ataaagtaaaggctaaagtgcactttccccctctaagtttgaaaaagttgtgattttgaccccctatgtacaaaaactacaattttg 21835117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 42195137 - 42195210
Alignment:
Q  163 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    ||||||||||||||||||| ||||||| ||||| |||| |||||| ||||||| ||| |||| ||||||||||||    
T  42195137 taaagtgcacttttcccccttaactttaaaaag-ttgcgattttggccccctatgtacaaaatctacaattttgg 42195210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 7311608 - 7311671
Alignment:
Q  177 cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||| |||||||| ||| || || ||||| ||||||||||||||| ||||    
T  7311608 cccccctaactttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttagccc 7311671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 34893686 - 34893739
Alignment:
Q  180 ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatt 233  Q
    ||||||||||||||| |||||||||||| | ||||| ||| |||||||||||||    
T  34893686 ccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 15204350 - 15204287
Alignment:
Q  153 aattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaa 216  Q
    ||||||||||| || |||||||||  |||||||||||| |||  |||| |||||||||||||||    
T  15204350 aattataggcttaattgcacttttgacccctaactttctaaaagttgcgattttgaccccctaa 15204287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 2685763 - 2685820
Alignment:
Q  178 ccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||||||| |||||||| |||  |||||||  |||||||||| |||||||||||||||    
T  2685763 ccccctaattttcaaaaacttataattttggtcccctaagtacaaaaactacaatttt 2685820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 2186774 - 2186846
Alignment:
Q  163 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||| |||| |||||||| ||||||||  |||||||||||  |  ||| ||| |||||||||||||||    
T  2186774 taaagtgcattttttccccctaagtttcaaaaagttgcaattttggtcttctatgtacaaaaactacaatttt 2186846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 5e-31; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 14999281 - 14999361
Alignment:
Q  156 tataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  14999281 tataggctaaagtgtacttttcccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 14999361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 39699867 - 39699787
Alignment:
Q  160 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| | ||||||||||||||||||    
T  39699867 ggctaaagtgcacttttcccccctaactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccc 39699787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 24422798 - 24422881
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  24422798 taggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccc 24422881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 52274967 - 52275046
Alignment:
Q  159 aggctaaagtgcactttt-cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  52274967 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgg 52275046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 35594208 - 35594293
Alignment:
Q  151 taaattataggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  35594208 taaattaaaggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttga-cccctaagtattaaaactacaattttg 35594293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 45150079 - 45149995
Alignment:
Q  152 aaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||| |||| |||||| |||||| |||||||||    
T  45150079 aaattttaggttaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttg 45149995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 45157310 - 45157226
Alignment:
Q  159 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcccttt 243  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||| ||||||| ||| |||||||||||||||| ||||||    
T  45157310 aggctaaagtgcactttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgacccttt 45157226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 43058784 - 43058867
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 241  Q
    |||| |||||| ||||||| |||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| |||||    
T  43058784 taggttaaagtacactttttccccctaactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccct 43058867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 51684366 - 51684447
Alignment:
Q  160 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||| |||||| ||||  ||||||||||| ||||||| ||||||||||||||||||||||||    
T  51684366 ggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccc 51684447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 39222575 - 39222492
Alignment:
Q  160 ggctaaagtgcacttttcccccct--aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 241  Q
    ||||||||||||||||| ||||||  ||||||||||| |||||||||||| |||||||||||||||||||||||| || |||||    
T  39222575 ggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccct 39222492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 52827346 - 52827422
Alignment:
Q  159 aggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||  ||||| |||||||    
T  52827346 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 52827422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 11437302 - 11437219
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||||||||||  ||| |||||| ||||||||||||||||||||    
T  11437302 taggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccc 11437219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 11436041 - 11436123
Alignment:
Q  159 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||| ||   |||||||||||||||||||||||||||    
T  11436041 aggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccc 11436123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 50680329 - 50680407
Alignment:
Q  157 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||| ||||||||| ||||||||| |||||| ||||| |||||||||||| |||||||||||||||||||| ||||||    
T  50680329 ataggttaaagtgcatttttcccccttaacttccaaaaacttgcaattttggccccctaagtataaaaactataatttt 50680407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 24426173 - 24426100
Alignment:
Q  163 taaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  24426173 taaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 24426100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 23980569 - 23980489
Alignment:
Q  158 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    |||||||||||||||||||||||| |||||||| |||| |||||||||||| | ||||||||| |||||||| ||||||||    
T  23980569 taggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttgg 23980489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 7674525 - 7674603
Alignment:
Q  157 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||| |||||||||||||||||| |||| ||||||||||||   ||||||||| ||||||||||||||||    
T  7674525 ataggctaaagtgcccttttcccccctaacttttaaaaacttgcaattttg-ggccctaagtacaaaaactacaattttg 7674603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 33088719 - 33088641
Alignment:
Q  159 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||||||| | ||||| ||||||| ||||||||||||||||  |||||| ||||||||||||||||    
T  33088719 aggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaattttg 33088641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 41364829 - 41364903
Alignment:
Q  160 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| |||||||| ||  ||||| |||||||    
T  41364829 ggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaattt 41364903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 35595296 - 35595211
Alignment:
Q  158 taggctaaagtgcacttttccccc-ctaactttcaaaagctt-gcaattttgaccccctaagtataaaaact-acaattttggccc 240  Q
    |||||||||||| ||||||||||| |||||||| |||| ||| ||||||||||||||||| ||||||||||| |||||||||||||    
T  35595296 taggctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttggccc 35595211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 36614005 - 36613928
Alignment:
Q  160 ggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||| |||||| ||||||||||| |||| |||| ||||||| ||||||||||| ||||||||||||||||    
T  36614005 ggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttg 36613928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 45148581 - 45148657
Alignment:
Q  160 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||| ||| || ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  45148581 ggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttg 45148657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 35067106 - 35067022
Alignment:
Q  157 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||||||||| || ||||||||  |||| |||||| ||||||| | | ||||||||||||||||||||    
T  35067106 ataggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccc 35067022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 7983047 - 7983126
Alignment:
Q  157 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||| ||||||||||||||| ||| |||||||||| | |||||||||||| ||||||| |||| ||||| |||||||||    
T  7983047 ataggttaaagtgcacttttctcccgtaactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttg 7983126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 43060109 - 43060030
Alignment:
Q  158 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||| ||||| ||||| |||||||||||||  ||| |||||||||||| |||||| ||||||||||||||||    
T  43060109 taggctaaagtgtactttaccccctctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttg 43060030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 51685868 - 51685789
Alignment:
Q  158 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||||||||| |||||||||||||  |||| |||||| ||| ||| ||| ||||||||||||||||    
T  51685868 taggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttg 51685789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 37526975 - 37526897
Alignment:
Q  163 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||| ||||||||||||| ||||||||||| |||||||||||| | |||||| |||| |||| |||||||||||||    
T  37526975 taaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttggccc 37526897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 39698562 - 39698643
Alignment:
Q  159 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcc 239  Q
    ||||||||||||||||| ||||||| |||||| |||| ||| |||||||| ||||||||||| | |||||| ||||||||||    
T  39698562 aggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataattttggcc 39698643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 43378810 - 43378737
Alignment:
Q  163 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||| | | |||||||||||| ||| ||||||||| |||||||||| ||||| ||||||||||    
T  43378810 taaagtgcacttttctctcttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttg 43378737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 41366232 - 41366156
Alignment:
Q  159 aggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||| |||||||||||||| | |||||||||  |||| ||||||| ||||| |||||||    
T  41366232 aggctaaagtgcacttttcccctcctaactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaattt 41366156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 39153214 - 39153135
Alignment:
Q  163 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 241  Q
    |||||||||||||| |||||| || |||||||| |||||||||||| |||| || ||| |||||||||||||||| ||||    
T  39153214 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccct 39153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 50681710 - 50681627
Alignment:
Q  155 ttataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    |||| ||||||||||||||||||||| || || |||||||| |||||||||||| | | |||| ||||||||||||||| ||||    
T  50681710 ttattggctaaagtgcacttttcccctcttaattttcaaaaacttgcaattttggctctctaactataaaaactacaatattgg 50681627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 15000057 - 14999983
Alignment:
Q  159 aggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaat 232  Q
    |||||||||| ||||||| || |||||||||| |||| ||||||||||||| |||||||||| |||| |||||||    
T  15000057 aggctaaagttcactttttcctccctaacttttaaaaacttgcaattttgatcccctaagtacaaaatctacaat 14999983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 44404441 - 44404523
Alignment:
Q  159 aggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||| ||||||||| ||| | |||||||||||| || ||||||||  ||||||||||| |||||||| |||||||||||    
T  44404441 aggctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggccc 44404523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 12390086 - 12390001
Alignment:
Q  156 tataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||| ||||||| ||| |||||||||||  |||| ||||||| |||||| ||| ||||| || |||||||||||    
T  12390086 tataggctaaagtgcatttttccctccttaactttcaaaaagttgcgattttgatcccctatgtacaaaaattataattttggccc 12390001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 25652710 - 25652795
Alignment:
Q  155 ttataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||| ||| ||  |||| |||||||| ||||||||||||| ||| |||||| ||||| || || ||||||||    
T  25652710 ttataggctaaagtgcaccttttccttctaattttcaaaaacttgcaattttgatcccttaagtacaaaaattataaatttggccc 25652795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 52828173 - 52828096
Alignment:
Q  158 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||| ||||||||||||||||||| |||| |||||||| |||||||||||| | |||||||||  ||||| |||||||    
T  52828173 taggttaaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaattt 52828096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 7675562 - 7675483
Alignment:
Q  157 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||| ||||| | ||  |||||||||||| |||||||||||| || |||||||| ||||| || |||||||    
T  7675562 ataggctaaagtgtactttccacctttaactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttg 7675483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 16290088 - 16290170
Alignment:
Q  155 ttataggctaaagtgcacttttccccc--ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||||||||| |||| ||||  ||||| |||||||  |||||||||||  ||| || |||||||||||||||||||    
T  16290088 ttataggctaaagtgcattttttccccatctaacgttcaaaaagttgcaattttggtcccttatgtataaaaactacaatttt 16290170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 39151945 - 39152008
Alignment:
Q  173 ttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||| ||| |||||||| |||| ||||||| ||||||| ||| ||||||||||||||||    
T  39151945 ttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttg 39152008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 33739094 - 33739146
Alignment:
Q  160 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgacccc 212  Q
    ||||||| |||| |||| ||| |||||||||||||||||| ||||||||||||    
T  33739094 ggctaaaatgcattttttccctctaactttcaaaagcttgtaattttgacccc 33739146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 33088068 - 33088143
Alignment:
Q  160 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||||||||  ||| ||||  |||||||||||||| |||| |||||| | | ||||| ||||||||||||||||||    
T  33088068 ggctaaagtatactgttccttcctaactttcaaaaacttgtaatttttatctcctaaatataaaaactacaatttt 33088143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 52276266 - 52276195
Alignment:
Q  158 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaacta 228  Q
    |||| ||||||||||||| ||||  |||||||||||||  ||| ||||||| ||||||||||| ||||||||    
T  52276266 taggttaaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaacta 52276195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 36612852 - 36612901
Alignment:
Q  159 aggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttg 207  Q
    ||||||||||||| |||||||||| ||||||||||||  |||||||||||    
T  36612852 aggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttg 36612901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 39221357 - 39221405
Alignment:
Q  159 aggctaaagtgcacttttccccc--ctaactttcaaaagcttgcaattt 205  Q
    |||||||| ||||||||||||||  ||||||||||||| ||||||||||    
T  39221357 aggctaaattgcacttttcccccctctaactttcaaaaacttgcaattt 39221405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 45156052 - 45156125
Alignment:
Q  163 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||||| ||||||||| |||| || |||||||| ||| |||||||||||  ||| ||| |||||||||||||||    
T  45156052 taaagttcacttttcctcccttaagtttcaaaaacttacaattttgaccttctatgtacaaaaactacaatttt 45156125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 46066525 - 46066604
Alignment:
Q  160 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||| |||||||||||||| || ||||||||||||  |||| |||||  |||| || ||| ||||||||||||||| ||||    
T  46066525 ggcttaagtgcacttttcctcc-taactttcaaaaagttgcgattttagccccttatgtacaaaaactacaattttagccc 46066604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 49308130 - 49308051
Alignment:
Q  157 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  49308130 ataggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttg 49308051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 17388317 - 17388231
Alignment:
Q  154 attataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||| |||||| | ||||||||||||||||||    
T  17388317 attataggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccc 17388231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 26421724 - 26421646
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  26421724 taggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttg 26421646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 17382989 - 17383073
Alignment:
Q  156 tataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||  ||| |||||| ||||||||||||||||||||    
T  17382989 tataggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccc 17383073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 1835205 - 1835126
Alignment:
Q  158 taggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  1835205 taggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttg 1835126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 1834119 - 1834200
Alignment:
Q  160 ggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||| |||||||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||    
T  1834119 ggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggccc 1834200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 19750673 - 19750600
Alignment:
Q  162 ctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| |||||||||||||||    
T  19750673 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 19750600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 19789133 - 19789206
Alignment:
Q  162 ctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| |||||||||||||||    
T  19789133 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 19789206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 1290301 - 1290218
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||||    
T  1290301 taggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccc 1290218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 31599788 - 31599867
Alignment:
Q  159 aggctaaagtgcactttt-cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    ||||| |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||    
T  31599788 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgg 31599867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 31601086 - 31601009
Alignment:
Q  160 ggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||| |||| |||||||| |||| |||||||||||||||||||||||| ||||||||||||||||    
T  31601086 ggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 31601009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 5526228 - 5526152
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  5526228 taggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaattt 5526152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 5525359 - 5525434
Alignment:
Q  159 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||  ||||| |||||||    
T  5525359 aggctaaagtacatttttcccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 5525434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 14868889 - 14868964
Alignment:
Q  159 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||| ||||| |||||||    
T  14868889 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14868964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 14877045 - 14876970
Alignment:
Q  159 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||| ||||| |||||||    
T  14877045 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14876970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 8758935 - 8758857
Alignment:
Q  163 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||||| | ||||||||||||||||||    
T  8758935 taaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccc 8758857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 13509461 - 13509383
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||| ||||||||||||||||||| ||||  ||||||||||| ||||| |||||| |||||||||||||||    
T  13509461 taggctaaagtgtacttttcccccctaacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttg 13509383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 25685925 - 25685848
Alignment:
Q  158 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  25685925 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 25685848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 48780246 - 48780323
Alignment:
Q  158 taggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||  ||||| |||||||    
T  48780246 taggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 48780323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 1963194 - 1963277
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||| || |||| ||| ||||||||||||||| ||||    
T  1963194 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccc 1963277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 3928960 - 3928877
Alignment:
Q  159 aggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 241  Q
    |||||||||||||||||||||||| ||||||||||||  |||| |||||| ||||||| |||| ||||| ||||||||||||||    
T  3928960 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaattttggccct 3928877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 8757673 - 8757752
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    ||||||||||||||||||| |||| |||||||||||| ||| |||||||  ||||||||||| | |||||||||||||||    
T  8757673 taggctaaagtgcactttttccccttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttgg 8757752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 10471489 - 10471414
Alignment:
Q  160 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  10471489 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 10471414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 25684934 - 25685009
Alignment:
Q  160 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||  ||||| |||||||    
T  25684934 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 25685009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 12129626 - 12129700
Alignment:
Q  163 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||| || ||||||||||| |||||||||||| |||| |||||| ||||||||||||||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttg 12129700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 13386635 - 13386558
Alignment:
Q  159 aggctaaagtgcactttt--cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||| ||||||  ||||| |||||||    
T  13386635 aggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaattt 13386558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 10470545 - 10470606
Alignment:
Q  159 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagta 219  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  10470545 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagta 10470606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 52491720 - 52491627
Alignment:
Q  148 ttataaattataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||| |||||||||||||||| |||||||| |||| ||||||||||| ||||||||||||  || |||| || | ||||||||||||||||||    
T  52491720 ttatatattataggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccc 52491627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 8155741 - 8155818
Alignment:
Q  163 taaagtgcacttttcccccctaactttcaaaagcttgcaatttt-gaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| |  |||||||||  ||||||||||||||||||||    
T  8155741 taaagtgcacttttcccc-ctaactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccc 8155818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 13386012 - 13386090
Alignment:
Q  158 taggctaaagtgcacttttccccc-ctaactttc-aaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||||| ||||||||| |||| |||||||||||| |||||||||||  ||||| |||||||    
T  13386012 taggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 13386090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 21177995 - 21178073
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||| ||||| ||||||||||||||| ||  |||||||||||| |||||| | | ||||||||||||||||    
T  21177995 taggctaaagtgtactttccccccctaactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttg 21178073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 49306773 - 49306851
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||||  |||| ||||||||||| |||||||||||| ||   |||||| ||||||||||||||||    
T  49306773 taggctaaagtgcacttttttcccccaactttcaaaaacttgcaattttggccatttaagtacaaaaactacaattttg 49306851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 55603633 - 55603551
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||| |||||||||||||| |||| |||||||||||| ||||||||||| | |||||  ||| ||||||||| ||||||||||    
T  55603633 taggttaaagtgcactttttccccttaactttcaaaaacttgcaattttaatcccctgtgtacaaaaactactattttggccc 55603551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 3927665 - 3927744
Alignment:
Q  159 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    ||||||||||||||||||||||| |||||||| ||||  |||| |||||| ||||| | |||| ||||||||||||||||    
T  3927665 aggctaaagtgcacttttccccctctaacttttaaaatgttgcgattttggccccccatgtatgaaaactacaattttgg 3927744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 1289095 - 1289173
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||| ||||||| ||||||||||||| ||||||||||   ||| |||||||| || |||||||||||||||||||||||    
T  1289095 taggttaaagtgaacttttccccccttaactttcaaatatttgtaattttgatcctctaagtataaaaactacaatttt 1289173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 35935631 - 35935553
Alignment:
Q  163 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||| ||||||| |||||| ||||  ||||||||||  ||||||||||| | ||||||||||||||||||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggccc 35935553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 37728672 - 37728582
Alignment:
Q  153 aattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcccttt 243  Q
    |||| |||| ||||||||| |||| || ||||||||| ||||  ||||||||||| || |||| ||| |||||||||||||||| ||||||    
T  37728672 aattttaggttaaagtgcattttttcctcctaacttttaaaaagttgcaattttggcctcctatgtacaaaaactacaattttgacccttt 37728582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 35934347 - 35934423
Alignment:
Q  163 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||  |||||||||| | ||| || |||||||||||    
T  35934347 taaagtgcacttttcccc-ctaactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggccc 35934423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 50909774 - 50909697
Alignment:
Q  160 ggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||| || |||||| ||| ||||  |||| |||||||| ||||| ||||||||||||||||||||    
T  50909774 ggctaaagtgcactttttccaccctaagttttaaaaagttgcgattttgactccctatgtataaaaactacaattttg 50909697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 10448363 - 10448279
Alignment:
Q  158 taggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 241  Q
    |||||||||||||||||  || ||||||| ||||||||  |||| |||||  ||||||| ||| |||||||||||||||||||||    
T  10448363 taggctaaagtgcacttcccctcccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccct 10448279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 1964542 - 1964464
Alignment:
Q  160 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    ||||||||||||||||||| |||| |||||| ||||  || |||||||| ||||||| | | |||||||||||||||||    
T  1964542 ggctaaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaattttgg 1964464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 50909270 - 50909348
Alignment:
Q  157 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||||| | ||||  ||||||| ||| ||||  |||||||||||||| ||||  ||||||||||||||||||    
T  50909270 ataggctaaagtgtatttttttcccctaagttttaaaaagttgcaattttgacctcctatatataaaaactacaatttt 50909348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 48781147 - 48781098
Alignment:
Q  159 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttg 207  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  48781147 aggctaaagtgcacttttccccctctaactttcaaaaatttgcaattttg 48781098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 55602379 - 55602451
Alignment:
Q  163 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||| ||||||||  |||||||||||| |||||||||||   || |||  ||||||||||||||||||    
T  55602379 taaagtgcatttttcccctttaactttcaaaaacttgcaattttagtcctctatatataaaaactacaatttt 55602451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 21539162 - 21539095
Alignment:
Q  170 cacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||| |||| || ||| |||| |||||||||||| || ||||||| |||||||||||||||||    
T  21539162 cacttttccacccttaatttttaaaaacttgcaattttggcctcctaagtgtaaaaactacaattttg 21539095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 10447006 - 10447083
Alignment:
Q  160 ggctaaagtgcacttttcccc--cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||||||||||||||||||||  | ||| ||||||||  ||||||||||  ||||||| ||| |||||| ||||||||    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaatttt 10447083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 7268930 - 7268848
Alignment:
Q  157 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcc 239  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||| || |||||||||| |||||||||||||||||    
T  7268930 ataggttaaagtgcacttttcccccctaactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcc 7268848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 54540892 - 54540810
Alignment:
Q  159 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||    
T  54540892 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccc 54540810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 47614173 - 47614266
Alignment:
Q  148 ttataaattataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||| |||||||||||| |||||||||||| ||||| |||||||||||||    
T  47614173 ttataaattattggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccc 47614266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 29931219 - 29931307
Alignment:
Q  153 aattataggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||  |||||||| || ||||||||||||||||||||    
T  29931219 aattataggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccc 29931307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 29980373 - 29980461
Alignment:
Q  153 aattataggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||  |||||||| || ||||||||||||||||||||    
T  29980373 aattataggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccc 29980461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 7758400 - 7758483
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||    
T  7758400 taggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccc 7758483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 7267642 - 7267724
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||| | ||||||||||||||||||    
T  7267642 taggttaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccc 7267724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 12700173 - 12700250
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  12700173 taggctaaagtgcacttt-cccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttg 12700250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 19984846 - 19984933
Alignment:
Q  157 ataggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcccttt 243  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||||||| ||||||| ||| |||||||||||||||| ||||||    
T  19984846 ataggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgacccttt 19984933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 22776923 - 22776832
Alignment:
Q  150 ataaattataggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||| ||| ||||||||||||||||||||    
T  22776923 ataaaatataggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccc 22776832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 12703610 - 12703520
Alignment:
Q  150 ataaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||| || |||||||||||||||||| ||| |||||||||||||  ||| ||||||| ||||||||||| ||||||||||||||||||||    
T  12703610 ataaaataaaggctaaagtgcactttttccctctaactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccc 12703520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 24516459 - 24516541
Alignment:
Q  159 aggctaaagtgcactttt-cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||| ||||||||||||| ||||||||||||| |||| |||||||||||| | ||||||||||||||||||||||||||||||    
T  24516459 aggccaaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccc 24516541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 28262189 - 28262273
Alignment:
Q  156 tataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  28262189 tataggctaaagtgcacttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 28262273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 534497 - 534580
Alignment:
Q  158 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||| |||| |||||| |||||| ||||||||||||||| |||| ||| ||||||||||||||||||||    
T  534497 taggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccc 534580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 8456479 - 8456558
Alignment:
Q  161 gctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||||  ||||||| || ||||||||||||||||||||    
T  8456479 gctaaagtgcactttttccccctaattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccc 8456558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 29932800 - 29932723
Alignment:
Q  159 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||  |||||||||| ||||||||||||||||    
T  29932800 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttg-gcccctaagtacaaaaactacaattttg 29932723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 29981954 - 29981877
Alignment:
Q  159 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||  |||||||||| ||||||||||||||||    
T  29981954 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttg-gcccctaagtacaaaaactacaattttg 29981877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 54539754 - 54539832
Alignment:
Q  159 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||| ||||||||| || ||||||||||||||||    
T  54539754 aggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttg 54539832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 5029785 - 5029708
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||| || ||||||||  ||||| ||||||||    
T  5029785 taggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttt 5029708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 47609695 - 47609772
Alignment:
Q  158 taggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||  ||||| |||||||    
T  47609695 taggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 47609772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 55192096 - 55192015
Alignment:
Q  159 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||| | ||| ||||| |||||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||||    
T  55192096 aggctaaagtgtattttccccccttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggccc 55192015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 11671443 - 11671371
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactaca 230  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||  |||||||| |||||||||||||    
T  11671443 taggctaaagtgcactttttccgcctaactttcaaaaacttgcaattttagccccctaaatataaaaactaca 11671371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 47610690 - 47610606
Alignment:
Q  151 taaattataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  47610690 taaaatataggttaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 47610606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 51470557 - 51470481
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||| || ||||||||||  ||||| |||||||    
T  51470557 taggctaaagtgcactcttcccccctaactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaattt 51470481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 5001197 - 5001275
Alignment:
Q  157 ataggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  5001197 ataggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 5001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 51038895 - 51038813
Alignment:
Q  156 tataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    ||||||||||||||||||||||| |||| |||||| ||||  ||||||||||||||||||| | | |||||||||||||||||    
T  51038895 tataggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaattttgg 51038813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 47615651 - 47615591
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaag 217  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  47615651 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaag 47615591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 51037536 - 51037616
Alignment:
Q  160 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||| ||| ||||||||||||  ||||||||||||||| ||| | | ||||||||||||||| ||||    
T  51037536 ggctaaagtgcacttttctcccttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccc 51037616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 18442622 - 18442712
Alignment:
Q  152 aaattataggctaaagtgcacttttcccc--cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||| ||||||||||||||||| ||||  ||||||||||||||  |||| |||||| ||||| | |||| |||||||||||||||||||    
T  18442622 aaattaaaggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccc 18442712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 19487696 - 19487786
Alignment:
Q  152 aaattataggctaaagtgcacttttcccc--cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||| ||||||||||||||||| ||||  ||||||||||||||  |||| |||||| ||||| | |||| |||||||||||||||||||    
T  19487696 aaattaaaggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccc 19487786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 19986175 - 19986089
Alignment:
Q  158 taggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccc--cctaagtataaaaactacaattttggccct 241  Q
    ||||||||||||||||||||||| | ||| |||||||| |||||||||||| |||  |||| |||||||||||||||||||| ||||    
T  19986175 taggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttgaccct 19986089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 51469972 - 51470047
Alignment:
Q  160 ggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  51469972 ggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 51470047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 49216247 - 49216321
Alignment:
Q  160 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatt 233  Q
    ||||||||||||||||||| | ||||| ||||||||  ||||||||||||||||||| ||| |||||||||||||    
T  49216247 ggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaatt 49216321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 46721322 - 46721245
Alignment:
Q  159 aggctaaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||||||||||| |||||||||||| ||||  |||| ||||| |||||||| ||| |||||||||||||||    
T  46721322 aggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaatttt 46721245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 52840705 - 52840628
Alignment:
Q  160 ggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||| | |||||| ||| ||||| |||||||||    
T  52840705 ggctaaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttg 52840628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 535883 - 535807
Alignment:
Q  160 ggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||||  ||| ||||||| ||||||| ||||||    
T  535883 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataatttt 535807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 34019232 - 34019168
Alignment:
Q  173 ttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    |||| |||| |||||||||||| |||||||||||||||||||| ||| ||| |||||||||||||    
T  34019232 tttttccccttaactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttgg 34019168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 46719941 - 46720017
Alignment:
Q  160 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||||||||||| ||||||||||| |||||| ||||  |||| |||||| ||||||| |||||||||||||||||||    
T  46719941 ggctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaatttt 46720017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 52276301 - 52276385
Alignment:
Q  157 ataggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||||| || |||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  52276301 ataggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaacaacaattttggccc 52276385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 53901487 - 53901408
Alignment:
Q  160 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||| ||| ||| ||||  ||||||||||||| || |||||| |||||||||||| |||||||    
T  53901487 ggctaaagtgcacttttccccc-taagtttaaaaaagttgcaattttgactccttaagtacaaaaactacaatgttggccc 53901408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 18456165 - 18456083
Alignment:
Q  160 ggctaaagtgcacttttcccccc--taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||  ||||||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  18456165 ggctaaagtgcacttttcccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 18456083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 28263214 - 28263131
Alignment:
Q  158 taggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||||||| ||||||| ||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  28263214 taggctaaagtgcacttttccccccctaacttttaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 28263131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 52281650 - 52281567
Alignment:
Q  158 taggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||||||| || |||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  52281650 taggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 52281567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 53614809 - 53614900
Alignment:
Q  150 ataaattataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||| |||||||||||||| |||||| |||| ||||||||||| ||| |||||||   || |||  |||||||||||||||||||||||    
T  53614809 ataaattttaggctaaagtgcatttttcctcccttaactttcaaaaacttacaattttagtcctctatatataaaaactacaattttggccc 53614900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 6170286 - 6170348
Alignment:
Q  173 ttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||| ||| |||||||||||| ||||||||||||| ||| |||||| ||||| |||||||||    
T  6170286 ttttcacccataactttcaaaaacttgcaattttgatcccttaagtacaaaaattacaatttt 6170348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 22775783 - 22775829
Alignment:
Q  167 gtgcacttttcccccctaactttcaaaagcttgcaattttgaccccc 213  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||    
T  22775783 gtgcacttttcccccctaactttcaaaaagttgcaattttggccccc 22775829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 52839036 - 52839113
Alignment:
Q  159 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||||| ||||||||| ||||||| |||||  ||| ||||||||||| |||||||  ||||| ||||||||    
T  52839036 aggctaaagtgcaattttccccctctaacttccaaaaatttgtaattttgaccctctaagtaccaaaacaacaatttt 52839113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 6249633 - 6249685
Alignment:
Q  183 taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||||||||||| ||||||||||| | ||| |||||| |||||||||||||||    
T  6249633 taactttcaaaaacttgcaattttaatcccttaagtacaaaaactacaatttt 6249685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 34940284 - 34940210
Alignment:
Q  163 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    |||||||||||||| ||| |||| ||| |||| ||||||||||| | | | || ||||||||| |||||||||||    
T  34940284 taaagtgcactttttccctctaatttttaaaaacttgcaattttaatctcttatgtataaaaattacaattttgg 34940210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 54987103 - 54987026
Alignment:
Q  163 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 241  Q
    ||||||||||||||||||| ||| ||||||||  |||| |||||   |||||| |||||||||||| ||||||| ||||    
T  54987103 taaagtgcacttttccccc-taagtttcaaaaagttgcgattttagtcccctatgtataaaaactataattttgaccct 54987026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 8875904 - 8875987
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttc--aaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||| ||||| |  |||  ||||||| ||||||||  |||| || ||| ||||||||||||||||||||    
T  8875904 taggctaaagtgcacttttcaccccttaagttcgaaaaagct-gcaattttagccccttatgtacaaaaactacaattttggccc 8875987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 31645000 - 31645049
Alignment:
Q  186 ctttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||| ||| |||||||| ||||||||||  |||||||||||||||    
T  31645000 ctttcaaaaacttacaattttggccccctaagtgcaaaaactacaatttt 31645049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 8338940 - 8338996
Alignment:
Q  160 ggctaaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgacccccta 215  Q
    |||||||||||||||||| |||||||  ||||||||  |||| ||||||||||||||    
T  8338940 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgacccccta 8338996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 11670398 - 11670462
Alignment:
Q  173 ttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    ||||||| | ||| ||||||||  ||||||||||   ||||||||||||||||||| ||||||||    
T  11670398 ttttcccgcttaattttcaaaaatttgcaattttagtcccctaagtataaaaactataattttgg 11670462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 26633360 - 26633416
Alignment:
Q  159 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgacccccta 215  Q
    |||||||| |||||||||| ||||||| ||| ||||  |||| ||||||||||||||    
T  26633360 aggctaaactgcacttttcgcccctaagttttaaaatgttgcgattttgacccccta 26633416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 34296678 - 34296626
Alignment:
Q  163 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgacccccta 215  Q
    ||||||||||||||||  ||||| ||||||||  ||||||||| |||||||||    
T  34296678 taaagtgcacttttccttcctaagtttcaaaattttgcaatttcgacccccta 34296626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 36449769 - 36449855
Alignment:
Q  151 taaattataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  36449769 taaaatataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttg 36449855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 18797243 - 18797324
Alignment:
Q  157 ataggctaaagtgcacttttcc--cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  18797243 ataggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttg 18797324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 38840597 - 38840513
Alignment:
Q  157 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||| ||||||||||||||| ||||    
T  38840597 ataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccc 38840513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 18299373 - 18299454
Alignment:
Q  160 ggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||| ||| |||||||||||| ||| |||||||| || |||||||||||||||||||||||||||||    
T  18299373 ggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccc 18299454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 802698 - 802610
Alignment:
Q  153 aattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 241  Q
    ||||| ||||||||||| ||||||||||||||| |||||||| |||||||||||| ||||||  ||| |||||||||||||||| ||||    
T  802698 aattaaaggctaaagtgtacttttcccccctaagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccct 802610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 18300827 - 18300748
Alignment:
Q  156 tataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||| |||||| |||||||||||||| ||||||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  18300827 tataagctaaattgcacttttccccc-taactttcataaacttgcaattttgaccccctaagtacaaaaactacaattttg 18300748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 18904365 - 18904445
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||| |||| |||||| |||||||||||||||||    
T  18904365 taggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttgg 18904445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 22848190 - 22848270
Alignment:
Q  159 aggctaaagtgcactttt-cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggc 238  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||  ||||||| || ||||||||||||||||||    
T  22848190 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggc 22848270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 7899985 - 7899902
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||  |||||||||| | ||||||||||||| ||||    
T  7899985 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccc 7899902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 18906090 - 18906007
Alignment:
Q  158 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||  ||||||||||| ||||||||||||||| ||||    
T  18906090 taggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccc 18906007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 36451023 - 36450941
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||||||||  |||||||||| | |||||||||||| |||||    
T  36451023 taggttaaagtgcacttttcccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccc 36450941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 24475224 - 24475305
Alignment:
Q  159 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||| |||  | |||||||||||||||| |||| ||||||  ||||||||||||||||||||||||||||||||    
T  24475224 aggctaaagtgcgcttccctcccctaactttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggccc 24475305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 7898688 - 7898772
Alignment:
Q  157 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||| ||||||||||||||| ||||| ||||||||||| |||||||||||  || |||||||||| ||||||||||||||||||    
T  7898688 ataggttaaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccc 7898772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 18868922 - 18869001
Alignment:
Q  158 taggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||| |||||||| |||||||||||||||| |||||||||||| || ||||| || ||||||||||||||||    
T  18868922 taggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaattttg 18869001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 11257621 - 11257701
Alignment:
Q  159 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcc 239  Q
    |||||||||||||||||| | || ||||||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||    
T  11257621 aggctaaagtgcacttttactcctctaactttcaaaaacttgcaattttaaaccc-taagtataaaaactacaattttggcc 11257701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 11258913 - 11258836
Alignment:
Q  159 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||||| ||| ||| | ||||||||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  11258913 aggctaaagtgcattttcccctctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 11258836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 41878092 - 41878175
Alignment:
Q  160 ggctaaagtgcacttttcccccctaactttcaaaagct---tgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||| ||||| |||||||||||| ||   |||||||||| ||||||||||| | ||||||||||||||||||    
T  41878092 ggctaaagtgcactttccccccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggccc 41878175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 38839240 - 38839323
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||| |||| |||||| || |||||||| |||||||||||  |||||||| || ||||||||||||||||||||    
T  38839240 taggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccc 38839323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 11938897 - 11938823
Alignment:
Q  152 aaattataggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaa 225  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||  | |||||||| |||||    
T  11938897 aaattttaggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa 11938823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 22588055 - 22587974
Alignment:
Q  159 aggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||| |||||||| | |||||||||||| |||||||||||| |||| || ||| ||||||||||||||||||||    
T  22588055 aggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttggcccc-tatgtacaaaaactacaattttggccc 22587974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 23869637 - 23869560
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||||||||||||| |||| |||||| |||| |||||||||||| |||||||| || |||||||||||||||    
T  23869637 taggctaaagtgcacttttccacccttaactttaaaaa-cttgcaattttggccccctaaatacaaaaactacaatttt 23869560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 41879315 - 41879237
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||| ||||||| |||||| || |||||||| |||||||||||| ||||||||||| | |||||||||||||    
T  41879315 taggctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaatttt 41879237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 32739643 - 32739704
Alignment:
Q  179 cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||| |||||||||||| |||| || ||| ||||||||||||||||||||    
T  32739643 cccctaactttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttggccc 32739704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 1034570 - 1034495
Alignment:
Q  160 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||||| ||||||||||| | |||||||||| ||||||| |||  ||||| |||||||    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaattt 1034495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 13030293 - 13030370
Alignment:
Q  161 gctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||| ||||||||||||| |||| |||||||  |||||||||| ||||| ||||||||| ||||    
T  13030293 gctaaagtgcacttttcccc-ctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttttgccc 13030370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 8534586 - 8534660
Alignment:
Q  163 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    |||||||| |||||||||| ||| |||||||| ||| ||||||||| ||  |||||||| |||||||||||||||    
T  8534586 taaagtgctcttttcccccttaattttcaaaaacttacaattttgatcctttaagtatagaaactacaattttgg 8534660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 13567975 - 13568049
Alignment:
Q  163 taaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||| ||||||||||  |||| |||||||| |||||||||||| |||||||| || ||||||||||||||||    
T  13567975 taaagtgtacttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttg 13568049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 21837355 - 21837298
Alignment:
Q  159 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaag 217  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||||| |||||||||    
T  21837355 aggctaaagtgcactttttcccc-taactttcaaaaacttgcaattttggccccctaag 21837298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 24476948 - 24476868
Alignment:
Q  155 ttataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||| ||||| ||||||||||| ||||| |||||| |||| |||| |||||||  |||||||||| ||||||||||||||||    
T  24476948 ttattggctagagtgcactttttccccc-aacttttaaaaacttgtaattttggtcccctaagtacaaaaactacaattttg 24476868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 28617926 - 28617999
Alignment:
Q  163 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||| || |||| | ||||||||||||||| |||||||||||| ||||| ||||| ||||||| ||||||||    
T  28617926 taaagtacattttttctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaattttg 28617999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 1033212 - 1033263
Alignment:
Q  161 gctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgacccc 212  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||    
T  1033212 gctaaagtgtacttttcccccctaacttttaaaaacttgcaattttggcccc 1033263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 16446152 - 16446231
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||| |||||  |||| ||||||||||| ||||||||||| ||| | ||| || ||||||||||||||||    
T  16446152 taggctaaagtgcatttttctacccttaactttcaaaaacttgcaattttaacctcataaatacaaaaactacaattttg 16446231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 13830270 - 13830322
Alignment:
Q  163 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgacccccta 215  Q
    ||||||||||||||||||||||| ||| ||||  |||| ||||||||||||||    
T  13830270 taaagtgcacttttcccccctaagtttgaaaaagttgcgattttgacccccta 13830322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 13570659 - 13570580
Alignment:
Q  159 aggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    ||||||||||||| |||||  ||| |||||||||||| |||||||||||   ||| |||||| |||||||| ||||||||    
T  13570659 aggctaaagtgcatttttctacccataactttcaaaaacttgcaattttagtcccttaagtacaaaaactataattttgg 13570580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 810854 - 810800
Alignment:
Q  187 tttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 241  Q
    |||||||| |||||||||||| ||||||  ||| |||||||||||||||| ||||    
T  810854 tttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccct 810800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 21837064 - 21837121
Alignment:
Q  154 attataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgacccc 212  Q
    ||||| ||||||||||||||||| || | |||||||||||| |||||||||||| ||||    
T  21837064 attattggctaaagtgcactttttcctc-taactttcaaaaacttgcaattttggcccc 21837121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 26545632 - 26545540
Alignment:
Q  150 ataaattataggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 241  Q
    ||||||| || |||||||||||||||| ||  | | ||||||||||  |||||||||||||||| ||| || ||||| || ||||||| ||||    
T  26545632 ataaattttaagctaaagtgcactttttccttcatgactttcaaaaatttgcaattttgaccccttaaatacaaaaattataattttgaccct 26545540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 7501955 - 7501872
Alignment:
Q  158 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||| |||||||||||||    
T  7501955 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccc 7501872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 31659622 - 31659704
Alignment:
Q  160 ggctaaagtgcactttt--cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||  |||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||    
T  31659622 ggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccc 31659704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 7500454 - 7500535
Alignment:
Q  159 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||| || ||||||||| |||| |||||||||||||    
T  7500454 aggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccc 7500535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 18371424 - 18371505
Alignment:
Q  160 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| |||| |||||| ||||||||||||||||||||    
T  18371424 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccc 18371505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 17782662 - 17782579
Alignment:
Q  152 aaattataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  17782662 aaattataggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 17782579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 14999249 - 14999177
Alignment:
Q  165 aagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggc 238  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  14999249 aagtgcacttttcccccctaattttcaaaa-cttgcaattttgaccccctaaatacaaaaactacaattttggc 14999177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 127335 - 127411
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||  ||||| |||||||    
T  127335 taggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaattt 127411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 18372544 - 18372477
Alignment:
Q  173 ttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  18372544 ttttcccccctaattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccc 18372477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 22630555 - 22630472
Alignment:
Q  158 taggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||| || |||||||||||| |||||||||||| |||||||| || ||||||||||||||| ||||    
T  22630555 taggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccc 22630472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 34174085 - 34174010
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatt 233  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||  ||||| ||||||    
T  34174085 taggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 3227697 - 3227620
Alignment:
Q  158 taggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  3227697 taggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 3227620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 17781663 - 17781736
Alignment:
Q  162 ctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||  ||||| |||||||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 17781736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 42886389 - 42886306
Alignment:
Q  158 taggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||| ||||||||||||||| || ||||||||||||||  |||||||||||||||||||| || ||||||||||||||| ||||    
T  42886389 taggttaaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccc 42886306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 47525468 - 47525393
Alignment:
Q  160 ggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||  |||||||||||| ||||| |||||||    
T  47525468 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaattt 47525393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 11658375 - 11658457
Alignment:
Q  156 tataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    ||||||||||| |||||||||||||||| ||||||||||| | |||||||||  ||||||| ||| |||||||||||||||||    
T  11658375 tataggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttgg 11658457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 3227109 - 3227182
Alignment:
Q  161 gctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  3227109 gctaaagtgcactttccccccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 3227182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 31949320 - 31949397
Alignment:
Q  158 taggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  31949320 taggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 31949397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 48935004 - 48934927
Alignment:
Q  160 ggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||| |||||| |||||||||||||||| |||| ||||||||||| ||||||| |||||||| |||||||    
T  48935004 ggctaaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttg 48934927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 31949912 - 31949828
Alignment:
Q  151 taaattataggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    ||||| ||||||||||||||||| |||||||| |||||||||||| |||||||||||| |||||||| ||  ||||| |||||||    
T  31949912 taaataataggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaattt 31949828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 20163658 - 20163585
Alignment:
Q  159 aggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaa 231  Q
    |||||||||||||||| ||| |||||||||||||||| |||||||||||| | ||||| ||| |||||||||||    
T  20163658 aggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 128699 - 128627
Alignment:
Q  163 taaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    ||||||||||||||||| || ||||||||||||  |||||||||||||||||||||||  ||||| |||||||    
T  128699 taaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaattt 128627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 21505413 - 21505491
Alignment:
Q  157 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||||||||| |||||||||||||  |||| |||||| ||||| |  || ||||||||||||||||    
T  21505413 ataggctaaagtgcacttttcccc-ctaactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttg 21505491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 47524532 - 47524599
Alignment:
Q  167 gtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatt 233  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |||||||||||  ||||| ||||||    
T  47524532 gtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 22629480 - 22629567
Alignment:
Q  157 ataggctaaagtgcacttttcccccc----taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||| |||||||||     ||| |||||||| |||| ||||||| || |||||||| ||||||||||||||||||||    
T  22629480 ataggctaaagtgcatttttccccctcccttaattttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccc 22629567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 11662649 - 11662571
Alignment:
Q  163 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||||  | | ||| ||| |||||||| |||||||||||    
T  11662649 taaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggccc 11662571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 47369780 - 47369862
Alignment:
Q  159 aggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||| |||||||||   |||||||||||||||| |||||||||||  || | |||||| |||||||| |||||||||||    
T  47369780 aggctaaaatgcactttttttcccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccc 47369862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 31661111 - 31661034
Alignment:
Q  159 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||||||||| ||| | |||||||||||||  |||||||||||||||  || ||| |||||||| ||||||    
T  31661111 aggctaaagtgcactttcccctctctaactttcaaaaatttgcaattttgaccctttacgtacaaaaactataatttt 31661034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 597383 - 597303
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 241  Q
    |||||||| ||||| ||||||||  |||||||||||| |||| |||||||| | | |||||| |||||||||||||||| ||||    
T  597383 taggctaatgtgcatttttcccc--taactttcaaaaacttgaaattttga-cgcataagtacaaaaactacaattttgaccct 597303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 769413 - 769492
Alignment:
Q  160 ggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggc 238  Q
    |||||||||||| |||||| ||  ||| |||||||| ||||||||||||||  |||||||| ||||| || |||||||||    
T  769413 ggctaaagtgcaattttccacctgtaattttcaaaaacttgcaattttgacatcctaagtacaaaaattataattttggc 769492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 14998005 - 14998067
Alignment:
Q  157 ataggctaaagtgcac--ttttcccccctaactttcaaaagcttgcaattttgaccccctaag 217  Q
    ||||||||||||||||  ||||  |||||||||||||||| ||| |||||||| |||||||||    
T  14998005 ataggctaaagtgcacctttttttcccctaactttcaaaaacttacaattttggccccctaag 14998067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 43899470 - 43899525
Alignment:
Q  183 taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggc 238  Q
    |||||||||||| ||||||||||||| |  |||| |||||||| ||||||||||||    
T  43899470 taactttcaaaaacttgcaattttgatcttctaaatataaaaattacaattttggc 43899525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 46483610 - 46483551
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaag 217  Q
    |||| ||||||||||||||||||  ||||||| |||| |||| |||||||| ||||||||    
T  46483610 taggttaaagtgcacttttcccctttaacttttaaaaacttgtaattttgatcccctaag 46483551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 20636923 - 20636841
Alignment:
Q  159 aggctaaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||| |||||||  ||||||||  |||| ||||||||||||||  || |||||   ||||||||||||    
T  20636923 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctatttaaaaaaatggcaattttggccc 20636841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 39182238 - 39182157
Alignment:
Q  159 aggctaaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||| |||||||||| |||||||| ||| ||||  |||||||||||||||||| | || |||||  |||||||||||||    
T  39182238 aggctaaactgcacttttcgccccctaagtttaaaaatgttgcaattttgaccccct-attaaaaaaatgacaattttggccc 39182157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 27869195 - 27869252
Alignment:
Q  159 aggctaaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgacccccta 215  Q
    ||||||||||||||||||| |||||||  ||||||||  |||| ||||||||||||||    
T  27869195 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgacccccta 27869252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 34351511 - 34351568
Alignment:
Q  178 ccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||||| |||||||||| |||||||||||| | | | ||||||| |||||||||||||    
T  34351511 ccccctgactttcaaaaacttgcaattttggctctccaagtatagaaactacaatttt 34351568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 34352897 - 34352805
Alignment:
Q  150 ataaattataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 241  Q
    |||||||  |||||||||||||||||| | || |||| |||||||| ||| | ||||||  ||| |||||| | |||||| ||||||||||||    
T  34352897 ataaatttaaggctaaagtgcactttttcacctctaattttcaaaaactttctattttggtcccttaagtacataaactataattttggccct 34352805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 16704600 - 16704521
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  16704600 taggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 16704521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 1829701 - 1829623
Alignment:
Q  163 taaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||  |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1829701 taaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggccc 1829623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 10784589 - 10784674
Alignment:
Q  157 ataggctaaagtgcacttttcccccc--taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||||| ||  ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  10784589 ataggctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggccc 10784674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 27322173 - 27322093
Alignment:
Q  155 ttataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||  ||||| ||||||||    
T  27322173 ttataggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 27322093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 7316398 - 7316314
Alignment:
Q  157 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||| |||  |||| |||||||||||||    
T  7316398 ataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccc 7316314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 8822905 - 8822819
Alignment:
Q  149 tataaattataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||| |||||||||||||||||||| | | ||||||||||| ||||||||||||||||||||||||  ||||| |||||||    
T  8822905 tataaattattggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 8822819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 3721611 - 3721672
Alignment:
Q  159 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagta 219  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  3721611 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagta 3721672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 3722610 - 3722533
Alignment:
Q  158 taggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||  ||||| |||||||    
T  3722610 taggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 3722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 8659263 - 8659340
Alignment:
Q  158 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  8659263 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 8659340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 8821871 - 8821948
Alignment:
Q  158 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  8821871 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 8821948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 34834685 - 34834605
Alignment:
Q  155 ttataggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| | ||||||||| ||||| |||||||    
T  34834685 ttataggttaaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaattt 34834605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 14822358 - 14822441
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||| |||||||||||| ||||| || |||||||| |||||||||||| |||| |||||||| ||||||||||||||||||    
T  14822358 taggctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccc 14822441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 7314880 - 7314956
Alignment:
Q  160 ggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||||| ||||| |||||||||    
T  7314880 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttg-gcccctaagtatcaaaacaacaattttg 7314956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 26575150 - 26575074
Alignment:
Q  163 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||| || | ||||||||||||| ||||||||||| ||||| |||||| ||||||||||||||||||||    
T  26575150 taaagtgcacttt-cctctctaactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccc 26575074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 27318312 - 27318389
Alignment:
Q  157 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||| ||| ||||||| ||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  27318312 ataggctaaagtgcaccttttccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 27318389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 8660305 - 8660230
Alignment:
Q  159 aggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 234  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||  ||||| |||||||    
T  8660305 aggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttga-cccctaagtaccaaaaccacaattt 8660230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 6842386 - 6842308
Alignment:
Q  158 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||||||||||||||||||||||| |||| ||||||||  ||||||||||| ||||||| ||  |||||||||||||||    
T  6842386 taggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaatttt 6842308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 10786000 - 10785938
Alignment:
Q  173 ttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||||||||| ||||  |||||||||| |||||||||||| |||||||||||||||    
T  10786000 ttttcccccctaacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaatttt 10785938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 27437825 - 27437905
Alignment:
Q  157 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||||||| ||||| |||||| ||||  ||||||||||| |||||||   ||||||||||||||||||    
T  27437825 ataggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttg 27437905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 17496791 - 17496878
Alignment:
Q  158 taggctaaagtgcacttttccccc-----ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||| |||||||||     ||||||||||||| ||| ||||||| |||| ||||||| ||||||| ||||||||||||    
T  17496791 taggctaaagtgcatttttccccctccccctaactttcaaaaacttacaattttaaccctctaagtacaaaaactgcaattttggccc 17496878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 14823680 - 14823595
Alignment:
Q  157 ataggctaaagtgcactttt--cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||  ||||| ||| ||| |||| |||||||||||  |||| |||||| | ||||||||||||||||||    
T  14823680 ataggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggccc 14823595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 26574617 - 26574690
Alignment:
Q  158 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactaca 230  Q
    |||||||||||||| ||| || || ||||||||||||| ||||||||||||| || ||||||| ||||||||||    
T  26574617 taggctaaagtgcaatttcccacctctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactaca 26574690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 12382811 - 12382735
Alignment:
Q  161 gctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||||||| || |||| ||| ||||  ||| |||||||||||||||||||| ||||||| |||||||    
T  12382811 gctaaagtgcacttttccacctctaatttttaaaaatttgtaattttgaccccctaagtattaaaactataattttg 12382735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 16703570 - 16703648
Alignment:
Q  160 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||| || ||||||||| |||||||||||||  || ||| || ||||||||||||||| ||||    
T  16703570 ggctaaagtgcacttttccccc-tatctttcaaaaacttgcaattttga-tccataaatacaaaaactacaattttagccc 16703648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 3333149 - 3333227
Alignment:
Q  160 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggc 238  Q
    |||||||||| ||||||||||  ||| ||| ||||  |||||| |||||||||||| | |||||||||| |||||||||    
T  3333149 ggctaaagtgaacttttcccctataagtttgaaaaaattgcaaatttgaccccctatgaataaaaactataattttggc 3333227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 30495807 - 30495718
Alignment:
Q  150 ataaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||| | ||||||||||||||||| |||| ||||||||||||  |||| ||||| | |||||| ||| |||||  |||||||||||||    
T  30495807 ataaatttttggctaaagtgcactttttcccc-taactttcaaaaagttgcgattttaatcccctatgtacaaaaataacaattttggccc 30495718  T

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Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 26717183 - 26717127
Alignment:
Q  162 ctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaag 217  Q
    ||||||||||||||||||||| ||| ||||| || ||||||||||||||||| ||||    
T  26717183 ctaaagtgcacttttccccccttaagtttcagaaacttgcaattttgaccccttaag 26717127  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 3333137 - 3333051
Alignment:
Q  150 ataaattataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||| || |||||||| |||||||||||||  |||| ||| ||||  |||| |||||| ||||||| ||| |||||||||||||||    
T  3333137 ataaagtaaaggctaaattgcacttttccccttctaagtttgaaaaagttgcgattttggccccctatgtacaaaaactacaatttt 3333051  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 26949259 - 26949210
Alignment:
Q  183 taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||||  |||||||||||  ||||||||||||||||||||||||||    
T  26949259 taactttcaaaaa-ttgcaattttg--cccctaagtataaaaactacaatttt 26949210  T

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Target: scaffold0320 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 19486 - 19565
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    |||||||||||||| ||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  19486 taggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttg 19565  T

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Target: scaffold0302 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 17468 - 17551
Alignment:
Q  158 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||| |||||| |||||| |||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  17468 taggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccc 17551  T

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Target: scaffold0302; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 18877 - 18796
Alignment:
Q  160 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||| ||| ||||||||| ||||  |||||||||||  |||||| ||| |||||||| |||||||||||    
T  18877 ggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggccc 18796  T

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Target: scaffold0294 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 5541 - 5462
Alignment:
Q  158 taggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  5541 taggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttg 5462  T

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Target: scaffold0294; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 4440 - 4518
Alignment:
Q  158 taggctaaagtgcac-ttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||||||||||| ||||||||||||| |||||||| ||| |||||||  |||| |||||| ||||| |||||||||    
T  4440 taggctaaagtgcacattttcccccctaattttcaaaaacttacaattttagccccttaagtacaaaaattacaatttt 4518  T

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Target: scaffold0019 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 60090 - 60167
Alignment:
Q  160 ggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||||| || |||||||| |||| |||||||||||||||||||| ||||||||||||||||||||    
T  60090 ggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttg 60167  T

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Target: scaffold0019; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 61559 - 61479
Alignment:
Q  161 gctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||| |||| || |||||||| |||||||||||  ||||||||||| |||||||| |||||||||||    
T  61559 gctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccc 61479  T

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Target: scaffold1303 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 1436 - 1516
Alignment:
Q  157 ataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||| |||||||||||| |||||||    
T  1436 ataggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttg 1516  T

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Target: scaffold0632 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 3410 - 3331
Alignment:
Q  158 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| || ||| |||||||| ||||||||    
T  3410 taggctaaagtgcacttttccccccttactttcaaaaacttacaattttgaccccataggtacaaaaactataattttgg 3331  T

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Target: scaffold0093 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 2564 - 2485
Alignment:
Q  161 gctaaagtgcacttttcccccctaactttcaaaag-cttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||| || ||||||||||    
T  2564 gctaaagtgcacttttccccc-taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccc 2485  T

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Target: scaffold0093; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 7187 - 7108
Alignment:
Q  161 gctaaagtgcacttttcccccctaactttcaaaag-cttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||| || ||||||||||    
T  7187 gctaaagtgcacttttccccc-taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccc 7108  T

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Target: scaffold0283 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 4241 - 4197
Alignment:
Q  109 cattttgtaaggcatgattcaaacctcaacttagttgagttataa 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  4241 cattttgtaaggcatgattcaaacctcaacttagttgagttataa 4197  T

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Target: scaffold0186 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 23071 - 23152
Alignment:
Q  150 ataaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaat 232  Q
    ||||||| | ||||||||||||||||||||| ||||||||||||| |||||||||||| ||| |||||||  ||||| |||||    
T  23071 ataaatttttggctaaagtgcacttttcccc-ctaactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaat 23152  T

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Target: scaffold0186; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 23993 - 23919
Alignment:
Q  158 taggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaa 231  Q
    |||||||||||||||||||  | ||||||||||||||| |||||||||||| | |||||| ||| ||||| ||||    
T  23993 taggctaaagtgcacttttttctccctaactttcaaaaacttgcaattttggctccctaaatatcaaaacaacaa 23919  T

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Target: scaffold0227 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 220 - 139
Alignment:
Q  160 ggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||||||||||||||||||| ||||||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  220 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 139  T

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Target: scaffold0112 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 37148 - 37228
Alignment:
Q  160 ggctaaagtgcacttttcccccctaactttcaaaagctt-gcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    |||||||||||||||||||||| || |||| ||||  || ||||||||||||||||||||| |||||| |||||||||||||    
T  37148 ggctaaagtgcacttttccccc-tatcttttaaaaaatttgcaattttgaccccctaagtacaaaaacaacaattttggccc 37228  T

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Target: scaffold0059 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 4829 - 4749
Alignment:
Q  161 gctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 241  Q
    ||||||||||||||| || |||||||||| |||| | |||||||||| |||||||| || | |||||||||||||| ||||    
T  4829 gctaaagtgcactttccctccctaacttttaaaaacatgcaattttggccccctaaatacagaaactacaattttgaccct 4749  T

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Target: scaffold0059; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 3695 - 3751
Alignment:
Q  179 cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    |||||||||||||||| |||||||||||| |||||| |||| | |||||| ||||||    
T  3695 cccctaactttcaaaaacttgcaattttggccccctgagtaaagaaactataatttt 3751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 49185 - 49109
Alignment:
Q  160 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||||| ||||||||||| |||| |||||| |||| |||||||||||| || ||||||||| ||||||||||||||    
T  49185 ggctaaattgcacttttccacccttaacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

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Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 49537 - 49457
Alignment:
Q  157 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||||||||||||||||||| ||||| |||||| ||||  ||||||||||| |||||||   ||||||||||||||||||    
T  49537 ataggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttg 49457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 233 - 311
Alignment:
Q  160 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 237  Q
    |||||||||||||||| ||||||| |||||||||||  |||||||||||  |||||| ||| |||||||| ||||||||    
T  233 ggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttgg 311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 9137 - 9046
Alignment:
Q  149 tataaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 240  Q
    ||||||| |||||||||||||||||||| || ||| | ||||||||  |||  |||||  || |||| ||| ||||||||||||||||||||    
T  9137 tataaataataggctaaagtgcactttttcctccttaatttcaaaaagttgtgatttttgcctcctatgtacaaaaactacaattttggccc 9046  T

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Target: scaffold0369 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 13183 - 13267
Alignment:
Q  150 ataaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 235  Q
    ||||| || |||||||||||||||||| |||||||||||| ||||  |||  ||||||||| |||| |||  ||||||||||||||    
T  13183 ataaaataaaggctaaagtgcactttt-ccccctaactttgaaaaagttgtgattttgacctcctatgtacgaaaactacaatttt 13267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 7526 - 7439
Alignment:
Q  150 ataaattataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 236  Q
    ||||| || |||||||||||||||| |||||| |||| ||| ||||  || | |||||||||||||| ||| | ||||||||||||||    
T  7526 ataaaataaaggctaaagtgcacttgtccccctctaagtttgaaaaagttacgattttgaccccctatgtacagaaactacaattttg 7439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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