View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2928_high_5 (Length: 250)

Name: NF2928_high_5
Description: NF2928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2928_high_5
NF2928_high_5
[»] chr1 (17 HSPs)
chr1 (1-240)||(45667760-45667992)
chr1 (79-122)||(567833-567876)
chr1 (24-79)||(33976680-33976735)
chr1 (28-79)||(44422693-44422744)
chr1 (79-173)||(19389789-19389883)
chr1 (105-151)||(47885123-47885169)
chr1 (28-64)||(21254772-21254808)
chr1 (15-79)||(45769756-45769820)
chr1 (24-79)||(7218095-7218150)
chr1 (91-150)||(7274040-7274099)
chr1 (79-180)||(4019681-4019781)
chr1 (10-55)||(15361058-15361103)
chr1 (28-73)||(25479581-25479626)
chr1 (6-79)||(34290230-34290303)
chr1 (28-80)||(6292486-6292538)
chr1 (24-64)||(35017585-35017625)
chr1 (28-64)||(38651456-38651492)
[»] chr8 (14 HSPs)
chr8 (28-79)||(10075576-10075627)
chr8 (28-78)||(34551115-34551165)
chr8 (24-64)||(1433557-1433597)
chr8 (28-79)||(31862487-31862538)
chr8 (28-58)||(20672765-20672795)
chr8 (26-64)||(26473775-26473813)
chr8 (36-81)||(778850-778895)
chr8 (142-179)||(16162645-16162682)
chr8 (28-73)||(27028831-27028876)
chr8 (10-67)||(42215089-42215146)
chr8 (32-64)||(25097395-25097427)
chr8 (29-73)||(37353275-37353319)
chr8 (29-73)||(41309785-41309829)
chr8 (30-78)||(43709268-43709316)
[»] chr2 (19 HSPs)
chr2 (24-79)||(9477946-9478001)
chr2 (22-73)||(10884540-10884591)
chr2 (25-79)||(36863647-36863701)
chr2 (28-73)||(9530753-9530798)
chr2 (5-58)||(12313175-12313228)
chr2 (19-71)||(19629365-19629417)
chr2 (19-71)||(19826266-19826318)
chr2 (6-57)||(16867755-16867806)
chr2 (10-64)||(35379023-35379077)
chr2 (29-79)||(39983336-39983386)
chr2 (24-73)||(3049974-3050023)
chr2 (15-64)||(9556248-9556297)
chr2 (88-180)||(626309-626401)
chr2 (24-64)||(1939353-1939393)
chr2 (28-64)||(24097817-24097853)
chr2 (26-54)||(25790145-25790173)
chr2 (24-64)||(34652057-34652097)
chr2 (79-179)||(39557750-39557850)
chr2 (88-180)||(41880601-41880693)
[»] chr7 (13 HSPs)
chr7 (79-185)||(425911-426017)
chr7 (29-77)||(30723065-30723113)
chr7 (15-79)||(44821953-44822017)
chr7 (15-64)||(25596042-25596091)
chr7 (83-136)||(46945833-46945886)
chr7 (10-73)||(3968764-3968827)
chr7 (34-79)||(18350738-18350783)
chr7 (26-79)||(39542323-39542376)
chr7 (24-64)||(529384-529424)
chr7 (28-72)||(12792588-12792632)
chr7 (15-75)||(24363613-24363673)
chr7 (79-151)||(31341103-31341175)
chr7 (28-64)||(48917371-48917407)
[»] chr6 (10 HSPs)
chr6 (88-152)||(33068659-33068723)
chr6 (24-79)||(7148660-7148715)
chr6 (136-180)||(7946020-7946064)
chr6 (28-79)||(31812038-31812089)
chr6 (24-66)||(2455817-2455859)
chr6 (28-77)||(18264325-18264374)
chr6 (28-76)||(1497978-1498026)
chr6 (28-64)||(3168286-3168322)
chr6 (24-64)||(6647396-6647436)
chr6 (24-76)||(20368201-20368253)
[»] chr5 (14 HSPs)
chr5 (109-180)||(26796342-26796413)
chr5 (109-180)||(26799860-26799931)
chr5 (88-180)||(38104962-38105054)
chr5 (109-180)||(26807410-26807481)
chr5 (6-57)||(33533542-33533593)
chr5 (132-179)||(40731174-40731221)
chr5 (15-78)||(41957463-41957526)
chr5 (33-79)||(18543226-18543272)
chr5 (15-64)||(7319020-7319069)
chr5 (24-73)||(11684414-11684463)
chr5 (7-79)||(7907875-7907947)
chr5 (15-79)||(12425565-12425629)
chr5 (99-151)||(33464230-33464282)
chr5 (79-151)||(37063163-37063235)
[»] chr4 (14 HSPs)
chr4 (24-79)||(2996567-2996622)
chr4 (15-79)||(10192278-10192341)
chr4 (24-64)||(50742857-50742897)
chr4 (26-81)||(56186924-56186979)
chr4 (24-66)||(6987762-6987804)
chr4 (135-181)||(35064733-35064779)
chr4 (29-79)||(56480342-56480392)
chr4 (90-143)||(19422335-19422388)
chr4 (24-57)||(24169279-24169312)
chr4 (29-58)||(39063673-39063702)
chr4 (10-79)||(43824277-43824346)
chr4 (28-72)||(27321854-27321898)
chr4 (15-79)||(28300311-28300375)
chr4 (135-179)||(39886719-39886763)
[»] chr3 (15 HSPs)
chr3 (109-180)||(10216871-10216942)
chr3 (109-180)||(10220390-10220461)
chr3 (25-79)||(24158525-24158579)
chr3 (24-64)||(3044280-3044320)
chr3 (19-71)||(45535234-45535286)
chr3 (28-71)||(2825149-2825192)
chr3 (109-180)||(9995854-9995925)
chr3 (109-180)||(10105723-10105794)
chr3 (24-79)||(39602231-39602286)
chr3 (24-58)||(24280726-24280760)
chr3 (28-78)||(40665424-40665474)
chr3 (15-64)||(2719477-2719526)
chr3 (142-179)||(44014946-44014983)
chr3 (112-180)||(10226483-10226551)
chr3 (15-79)||(34382936-34383000)
[»] scaffold0024 (1 HSPs)
scaffold0024 (79-151)||(27485-27557)


Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 45667760 - 45667992
Alignment:
Q  1 tatcccatattcaaaagttgatctcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttatgacttgactttatcttgtgta 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  45667760 tatcccatatttaaaagttgatctcaacttattttcataagctctccaggatagcttaagaaaatatcttataactt-------gactttatcttgtgta 45667852  T
Q  101 ataaaaataacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaacagagccttagattagtgacagc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  45667853 ataaaaataacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaacagagccttagattagtgaccgc 45667952  T
Q  201 aagttttggtatattatttattctctgtctaccctctctg 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45667953 aagttttggtatattatttattctctgtctaccctctctg 45667992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 567876 - 567833
Alignment:
Q  79 tgacttgactttatcttgtgtaataaaaataacttattcataag 122  Q
    |||||||| ||||||||||||||||||||| |||||||||||||    
T  567876 tgacttgattttatcttgtgtaataaaaatgacttattcataag 567833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 33976735 - 33976680
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    ||||||||||| ||||||||||| ||||||| ||||||||| | ||||||||||||    
T  33976735 tcaacttatttccataagctctctaggataggttaagaaaacaacttataacttat 33976680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 44422744 - 44422693
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||||||||||||||||||||||||||||  |||||| |||||| |||||    
T  44422744 cttattttcataagctctccaggatagcttataaaaatagcttatagcttat 44422693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 19389883 - 19389789
Alignment:
Q  79 tgacttgactttatcttgtgtaataaaaataacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatc 173  Q
    |||||| | ||||| ||||||||||||| ||||||||| |||||   |||||| | ||||| |||||||||||  |||||||||| |||| ||||    
T  19389883 tgactttattttatattgtgtaataaaagtaacttatttataagttattatatgataagcgtttatgctataagctacaaaataagttgtctatc 19389789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 47885123 - 47885169
Alignment:
Q  105 aaataacttattcataagcatttatataacaagcgcttatgctataa 151  Q
    |||||||||||||||||||| |||||| | |||||||||||||||||    
T  47885123 aaataacttattcataagcaattatatgataagcgcttatgctataa 47885169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 21254772 - 21254808
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaa 64  Q
    ||||||||||||||||||||| |||||||||||||||    
T  21254772 cttattttcataagctctccaagatagcttaagaaaa 21254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 45769756 - 45769820
Alignment:
Q  15 aagttgatctcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||||| | | |||||||||||||| ||| ||||||||||||  |||||| ||||||||||||    
T  45769756 aagttgattttatcttattttcataagttcttcaggatagcttatcaaaatagcttataacttat 45769820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 7218095 - 7218150
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||||||||||||||| |||||||||||| ||| ||||| | |||||| |||||    
T  7218095 tcaacttattttcataagttctccaggataggttatgaaaacaacttatagcttat 7218150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 7274040 - 7274099
Alignment:
Q  91 atcttgtgtaataaaaataacttattcataagcatttatataacaagcgcttatgctata 150  Q
    ||||| ||| ||||||||||| ||| ||||||||||||||| | |||| |||||||||||    
T  7274040 atcttttgttataaaaataacatatacataagcatttatatgataagcacttatgctata 7274099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 4019681 - 4019781
Alignment:
Q  79 tgacttgactttatcttgtgtaataaaaataacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaac 178  Q
    |||||||| |||||| | |||| || |||| |||||||||||| ||||||||| | |||||||| ||| |||| |   ||| ||| ||||||||||||||    
T  4019681 tgacttgattttatcatttgta-tagaaattacttattcataaacatttatattataagcgcttttgccataagtgctaaattaagttgtttatccaaac 4019779  T
Q  179 ag 180  Q
    ||    
T  4019780 ag 4019781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 15361103 - 15361058
Alignment:
Q  10 ttcaaaagttgatctcaacttattttcataagctctccaggatagc 55  Q
    |||| |||||| | ||| ||||||||||||||||||||||||||||    
T  15361103 ttcataagttgttttcagcttattttcataagctctccaggatagc 15361058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 25479626 - 25479581
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaatatcttata 73  Q
    ||||||||||||||||||| ||||||||||| ||||| | ||||||    
T  25479626 cttattttcataagctctctaggatagcttatgaaaacaacttata 25479581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 34290303 - 34290230
Alignment:
Q  6 catattcaaaagttgatctcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||||| |||||| | ||| |||||||||||||| ||| || ||||||||| ||||| | |||||| |||||    
T  34290303 catattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagcttat 34290230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 6292538 - 6292486
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaatatcttataacttatg 80  Q
    |||||||||||||||||||||  |||| ||| ||||||| ||||||| |||||    
T  6292538 cttattttcataagctctccaaaatagtttacgaaaatagcttataagttatg 6292486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 35017625 - 35017585
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaa 64  Q
    ||||||||||| |||||||||||||||| |||||| |||||    
T  35017625 tcaacttatttccataagctctccaggacagcttatgaaaa 35017585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 38651456 - 38651492
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaa 64  Q
    |||||||| |||||||||||||||||||||| |||||    
T  38651456 cttatttttataagctctccaggatagcttatgaaaa 38651492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 10075576 - 10075627
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  10075576 cttattttcataagctctctaggatagcttatgaaaatagcttataacttat 10075627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 34551165 - 34551115
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaatatcttataactta 78  Q
    |||||||||||||||||||||||||| |||||||||| | |||||||||||    
T  34551165 cttattttcataagctctccaggataacttaagaaaacaacttataactta 34551115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 1433597 - 1433557
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaa 64  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  1433597 tcaacttattttcataagctctccaggatagcttatgaaaa 1433557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 31862538 - 31862487
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    ||||||||||||||||||| |||||| |||| ||||| |||||||| |||||    
T  31862538 cttattttcataagctctctaggataacttatgaaaacatcttatagcttat 31862487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 20672795 - 20672765
Alignment:
Q  28 cttattttcataagctctccaggatagctta 58  Q
    |||||||||||||||||||||||||||||||    
T  20672795 cttattttcataagctctccaggatagctta 20672765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 26473775 - 26473813
Alignment:
Q  26 aacttattttcataagctctccaggatagcttaagaaaa 64  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  26473775 aacttattttcataagctctctaggatagcttatgaaaa 26473813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 778850 - 778895
Alignment:
Q  36 cataagctctccaggatagcttaagaaaatatcttataacttatga 81  Q
    ||||||||||| ||||||||||| ||||||||| ||||| ||||||    
T  778850 cataagctctctaggatagcttatgaaaatatcctataaattatga 778895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 16162682 - 16162645
Alignment:
Q  142 tatgctataaattacaaaataatttgtttatccaaaca 179  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  16162682 tatgctataaactacaaattaatttgtttatccaaaca 16162645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 27028876 - 27028831
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaatatcttata 73  Q
    ||||||||||||||||||||| ||||||||| ||||| | ||||||    
T  27028876 cttattttcataagctctccaagatagcttatgaaaacagcttata 27028831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 42215089 - 42215146
Alignment:
Q  10 ttcaaaagttgatctcaacttattttcataagctctccaggatagcttaagaaaatat 67  Q
    |||| |||||| | ||| ||||||| ||||||||||||| ||||||||| ||||||||    
T  42215089 ttcataagttgttttcagcttatttacataagctctccaagatagcttatgaaaatat 42215146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 25097427 - 25097395
Alignment:
Q  32 ttttcataagctctccaggatagcttaagaaaa 64  Q
    ||||||||||||||||||||||||||| |||||    
T  25097427 ttttcataagctctccaggatagcttatgaaaa 25097395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 37353275 - 37353319
Alignment:
Q  29 ttattttcataagctctccaggatagcttaagaaaatatcttata 73  Q
    |||||||||||||||||| | ||||||||||||||| | ||||||    
T  37353275 ttattttcataagctctcaaagatagcttaagaaaacagcttata 37353319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 41309829 - 41309785
Alignment:
Q  29 ttattttcataagctctccaggatagcttaagaaaatatcttata 73  Q
    |||||||||||| || | |||||||||||| ||||||||||||||    
T  41309829 ttattttcataaacttttcaggatagcttatgaaaatatcttata 41309785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 43709316 - 43709268
Alignment:
Q  30 tattttcataagctctccaggatagcttaagaaaatatcttataactta 78  Q
    ||||||||||||||||||||||||||| | ||||| | |||||| ||||    
T  43709316 tattttcataagctctccaggatagctcatgaaaacaacttatagctta 43709268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 9478001 - 9477946
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    ||||||||||||||||| ||||||||||||||||| ||||| | ||||||||||||    
T  9478001 tcaacttattttcataacctctccaggatagcttatgaaaacaacttataacttat 9477946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 10884540 - 10884591
Alignment:
Q  22 tctcaacttattttcataagctctccaggatagcttaagaaaatatcttata 73  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| | ||||||    
T  10884540 tctcaacttattttcataagctctctaggatagcttatgaaaacagcttata 10884591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 36863647 - 36863701
Alignment:
Q  25 caacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||||||||||||||||||||| ||||||||| ||||| |  |||||||||||    
T  36863647 caacttattttcataagctctccaagatagcttatgaaaacaatttataacttat 36863701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 9530753 - 9530798
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaatatcttata 73  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||||    
T  9530753 cttactttcataagctctccaggatagcttatgaaaatatcatata 9530798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 12313175 - 12313228
Alignment:
Q  5 ccatattcaaaagttgatctcaacttattttcataagctctccaggatagctta 58  Q
    |||| |||| |||||||| ||| ||||||||||||||||||||| |||||||||    
T  12313175 ccatgttcataagttgatttcaccttattttcataagctctccaagatagctta 12313228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 19629417 - 19629365
Alignment:
Q  19 tgatctcaacttattttcataagctctccaggatagcttaagaaaatatctta 71  Q
    |||| ||||||||||||||||| |||||||| |||||||| ||||| ||||||    
T  19629417 tgatttcaacttattttcataaactctccagtatagcttatgaaaacatctta 19629365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 19826318 - 19826266
Alignment:
Q  19 tgatctcaacttattttcataagctctccaggatagcttaagaaaatatctta 71  Q
    |||| ||||||||||||||||| |||||||| |||||||| ||||| ||||||    
T  19826318 tgatttcaacttattttcataaactctccagtatagcttatgaaaacatctta 19826266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 16867806 - 16867755
Alignment:
Q  6 catattcaaaagttgatctcaacttattttcataagctctccaggatagctt 57  Q
    |||||||| |||||| | ||||||||||| ||||||||||||| ||||||||    
T  16867806 catattcataagttgttttcaacttatttccataagctctccaagatagctt 16867755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 35379023 - 35379077
Alignment:
Q  10 ttcaaaagttgatctcaacttattttcataagctctccaggatagcttaagaaaa 64  Q
    |||| |||||| | ||| ||||||||||||||||||||| ||||||||| |||||    
T  35379023 ttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaa 35379077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 39983386 - 39983336
Alignment:
Q  29 ttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||||||| ||||||||||||||||||| ||||| | |||||| |||||    
T  39983386 ttattttcattagctctccaggatagcttatgaaaacaacttatagcttat 39983336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 3050023 - 3049974
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaatatcttata 73  Q
    ||||| ||||||||||||||||||| ||||||||| ||||| | ||||||    
T  3050023 tcaacatattttcataagctctccatgatagcttatgaaaacagcttata 3049974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 9556297 - 9556248
Alignment:
Q  15 aagttgatctcaacttattttcataagctctccaggatagcttaagaaaa 64  Q
    |||| ||| |||||||||||||||||||| || ||||||||||| |||||    
T  9556297 aagtagatttcaacttattttcataagctttctaggatagcttatgaaaa 9556248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 626309 - 626401
Alignment:
Q  88 tttatcttgtgtaataaaaataacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaacag 180  Q
    ||||||||||||  || ||||| ||||||||||| || ||| |  | ||||||| || | ||||  |||||||||| ||||||||||||||||    
T  626309 tttatcttgtgttctagaaatagcttattcataaccacttacaagataagcgctaatacaataagctacaaaataagttgtttatccaaacag 626401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 1939353 - 1939393
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaa 64  Q
    ||||||||||| |||||||||||||| |||||||| |||||    
T  1939353 tcaacttatttccataagctctccagtatagcttatgaaaa 1939393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 24097853 - 24097817
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaa 64  Q
    |||||||||||||||||||||||||| |||| |||||    
T  24097853 cttattttcataagctctccaggataacttatgaaaa 24097817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 54
Target Start/End: Complemental strand, 25790173 - 25790145
Alignment:
Q  26 aacttattttcataagctctccaggatag 54  Q
    |||||||||||||||||||||||||||||    
T  25790173 aacttattttcataagctctccaggatag 25790145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 34652057 - 34652097
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaa 64  Q
    ||||||||||| ||||||||||||| ||||||||| |||||    
T  34652057 tcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 39557750 - 39557850
Alignment:
Q  79 tgacttgactttatcttgtgtaataaaaataacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaac 178  Q
    |||||| | |||||| | ||| ||||||||| |||||  |||| || |||||| ||||| | |||| ||||  ||| |||||||| ||||||||||||||    
T  39557750 tgactttattttatcatttgtcataaaaatagcttatgtataaccacttatatgacaagtgtttattctattgattgcaaaataagttgtttatccaaac 39557849  T
Q  179 a 179  Q
    |    
T  39557850 a 39557850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 41880601 - 41880693
Alignment:
Q  88 tttatcttgtgtaataaaaataacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaacag 180  Q
    |||||| ||||||||| |||||   |||| ||||||| ||| || | |||||||| ||||||||  | |||| ||| ||||||||||||||||    
T  41880601 tttatcgtgtgtaatagaaatagtatatttataagcaattacatgataagcgcttgtgctataagctgcaaagtaagttgtttatccaaacag 41880693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 425911 - 426017
Alignment:
Q  79 tgacttgactttatcttgtgtaataaaaataacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaac 178  Q
    |||||| | |||||||||| | ||| || |||||| |||||||| | ||||| || |||||||||||||||||  | |||||||| || |||||||||||    
T  425911 tgactttattttatcttgtattatagaattaacttgttcataagaaattatacaataagcgcttatgctataagctgcaaaataagttatttatccaaac 426010  T
Q  179 agagcct 185  Q
    || ||||    
T  426011 agggcct 426017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 30723065 - 30723113
Alignment:
Q  29 ttattttcataagctctccaggatagcttaagaaaatatcttataactt 77  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  30723065 ttattttcaaaagctctccaggatagcttatgaaaatagcttataactt 30723113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 44822017 - 44821953
Alignment:
Q  15 aagttgatctcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||| | |||||||||||||||||| ||||||| |||||||| ||||| | ||||||||||||    
T  44822017 aagttgttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttat 44821953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 25596091 - 25596042
Alignment:
Q  15 aagttgatctcaacttattttcataagctctccaggatagcttaagaaaa 64  Q
    |||||| | ||||||||||||||||||||||||| ||||||||| |||||    
T  25596091 aagttgttttcaacttattttcataagctctccaagatagcttatgaaaa 25596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 46945886 - 46945833
Alignment:
Q  83 ttgactttatcttgtgtaataaaaataacttattcataagcatttatataacaa 136  Q
    |||| |||||||||||| ||| ||||| ||||||||||||||||||||| ||||    
T  46945886 ttgattttatcttgtgttatacaaatagcttattcataagcatttatatcacaa 46945833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 3968764 - 3968827
Alignment:
Q  10 ttcaaaagttgatctcaacttattttcataagctctccaggatagcttaagaaaatatcttata 73  Q
    |||| |||||||| |||  |||||| ||||| ||||||||||||||||| ||||||| ||||||    
T  3968764 ttcataagttgatttcatgttatttccataaactctccaggatagcttatgaaaatagcttata 3968827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 18350738 - 18350783
Alignment:
Q  34 ttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    ||||||||||||||| ||||||||| ||||| | ||||||||||||    
T  18350738 ttcataagctctccatgatagcttatgaaaacagcttataacttat 18350783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 39542323 - 39542376
Alignment:
Q  26 aacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||||||||||||||||||||||||| |||| | ||| | |||||| |||||    
T  39542323 aacttattttcataagctctccaggataacttatggaaacaacttatatcttat 39542376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 529424 - 529384
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaa 64  Q
    ||||| ||||||||||||||||||| ||||||||| |||||    
T  529424 tcaacatattttcataagctctccaagatagcttatgaaaa 529384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 12792588 - 12792632
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaatatcttat 72  Q
    |||||||||||||||||| || ||||||||| ||||||| |||||    
T  12792588 cttattttcataagctcttcaagatagcttatgaaaatagcttat 12792632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 24363613 - 24363673
Alignment:
Q  15 aagttgatctcaacttattttcataagctctccaggatagcttaagaaaatatcttataac 75  Q
    |||||| | ||| ||||||| ||||| ||||||||||||||||| ||||| | ||||||||    
T  24363613 aagttgttttcagcttatttccataacctctccaggatagcttatgaaaacaacttataac 24363673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 31341175 - 31341103
Alignment:
Q  79 tgacttgactttatcttgtgtaataaaaataacttattcataagcatttatataacaagcgcttatgctataa 151  Q
    |||||| | |||||||| ||| ||| ||||| ||||| |||||||||||| || | |||||||||||| ||||    
T  31341175 tgactttattttatcttttgttatacaaatagcttatacataagcatttagatgataagcgcttatgcaataa 31341103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 48917371 - 48917407
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaa 64  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  48917371 cttattttcataagctctccaagatagcttatgaaaa 48917407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 33068659 - 33068723
Alignment:
Q  88 tttatcttgtgtaataaaaataacttattcataagcatttatataacaagcgcttatgctataaa 152  Q
    |||||||| ||| ||| ||||||||||| ||||||||||||| | | ||||||||||||||||||    
T  33068659 tttatcttttgttatagaaataacttatacataagcatttatttgataagcgcttatgctataaa 33068723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 7148715 - 7148660
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    ||||||||||||||||||||||||||| |||||||  |||||| |||||| |||||    
T  7148715 tcaacttattttcataagctctccagggtagcttattaaaataccttatagcttat 7148660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 7946020 - 7946064
Alignment:
Q  136 agcgcttatgctataaattacaaaataatttgtttatccaaacag 180  Q
    ||||||||||||||||  |||||||||| ||||||||||||||||    
T  7946020 agcgcttatgctataagctacaaaataagttgtttatccaaacag 7946064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 31812038 - 31812089
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    ||||||||||||||||||||| ||||||||| ||||| | |||||| |||||    
T  31812038 cttattttcataagctctccaagatagcttatgaaaacaacttatatcttat 31812089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 2455859 - 2455817
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaata 66  Q
    ||||||||||| ||||||||||||| ||||||||| |||||||    
T  2455859 tcaacttatttccataagctctccaagatagcttatgaaaata 2455817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 18264374 - 18264325
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaatatcttataactt 77  Q
    ||||||| ||||| |||| |||||||| ||||||||||| ||||||||||    
T  18264374 cttatttccataacctcttcaggatagtttaagaaaatagcttataactt 18264325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 1498026 - 1497978
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaatatcttataact 76  Q
    ||||||||||||||||||||| ||||| ||| |||||  ||||||||||    
T  1498026 cttattttcataagctctccaagatagtttatgaaaacttcttataact 1497978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 3168286 - 3168322
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaa 64  Q
    ||||||| | |||||||||||||||||||||||||||    
T  3168286 cttatttccttaagctctccaggatagcttaagaaaa 3168322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 6647436 - 6647396
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaa 64  Q
    ||||||||||||||||||||||| | ||||||||| |||||    
T  6647436 tcaacttattttcataagctctctaagatagcttatgaaaa 6647396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 20368201 - 20368253
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaatatcttataact 76  Q
    |||||||||||||||||| |||||| || |||||| ||||| | |||||||||    
T  20368201 tcaacttattttcataagttctccaagaaagcttatgaaaacaacttataact 20368253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 26796413 - 26796342
Alignment:
Q  109 aacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaacag 180  Q
    |||||||||||||||| ||||||   |||||||||||| ||||  | |||||||| ||||||||||||||||    
T  26796413 aacttattcataagcacttatatggtaagcgcttatgcgataaggtgcaaaataagttgtttatccaaacag 26796342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 26799931 - 26799860
Alignment:
Q  109 aacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaacag 180  Q
    |||||||||||||||| ||||||   |||||||||||| ||||  | |||||||| ||||||||||||||||    
T  26799931 aacttattcataagcacttatatggtaagcgcttatgcgataaggtgcaaaataagttgtttatccaaacag 26799860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 38104962 - 38105054
Alignment:
Q  88 tttatcttgtgtaataaaaataacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaacag 180  Q
    |||||||||||| |  |||||| ||||||||||| |  |||||| | || |||||| |||||||  | |||||||| ||||||||||||||||    
T  38104962 tttatcttgtgttacgaaaatagcttattcataaccgcttatatcataaacgcttacgctataagctgcaaaataagttgtttatccaaacag 38105054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 26807481 - 26807410
Alignment:
Q  109 aacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaacag 180  Q
    ||||||||||||| || ||||||   |||||||||||| ||||  | |||||||| ||||||||||||||||    
T  26807481 aacttattcataaacacttatatggtaagcgcttatgcgataaggtgcaaaataagttgtttatccaaacag 26807410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 33533542 - 33533593
Alignment:
Q  6 catattcaaaagttgatctcaacttattttcataagctctccaggatagctt 57  Q
    |||||||| |||||| | ||||||||||| ||||||||||||| ||||||||    
T  33533542 catattcataagttgttttcaacttatttccataagctctccaagatagctt 33533593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 40731221 - 40731174
Alignment:
Q  132 aacaagcgcttatgctataaattacaaaataatttgtttatccaaaca 179  Q
    ||||||| ||||||||||||  | ||||||||||||||||||||||||    
T  40731221 aacaagcacttatgctataagctgcaaaataatttgtttatccaaaca 40731174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 41957463 - 41957526
Alignment:
Q  15 aagttgatctcaacttattttcataagctctccaggatagcttaagaaaatatcttataactta 78  Q
    |||||| | ||| |||||||||||||| |||| ||||||||||| ||||| | |||||||||||    
T  41957463 aagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttataactta 41957526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 18543226 - 18543272
Alignment:
Q  33 tttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||||||||||||||||||||||| ||||| | |||||| |||||    
T  18543226 tttcataagctctccaggatagcttatgaaaacaacttatatcttat 18543272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 7319020 - 7319069
Alignment:
Q  15 aagttgatctcaacttattttcataagctctccaggatagcttaagaaaa 64  Q
    |||||| ||||| |||||||||||||| |||||| ||||||||| |||||    
T  7319020 aagttgttctcagcttattttcataagttctccaagatagcttatgaaaa 7319069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 11684463 - 11684414
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaatatcttata 73  Q
    ||||||||||| | |||||||||||| |||||||| ||||||| ||||||    
T  11684463 tcaacttatttccgtaagctctccagcatagcttatgaaaatagcttata 11684414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 7907947 - 7907875
Alignment:
Q  7 atattcaaaagttgatctcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    ||||||| |||||| | ||| |||| |||||||||||||||| || ||||||  |||| | ||||||||||||    
T  7907947 atattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttat 7907875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 12425629 - 12425565
Alignment:
Q  15 aagttgatctcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||| | |||||||||||||||||| |||||| ||||||||  ||||| | |||||| |||||    
T  12425629 aagttgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttat 12425565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 33464230 - 33464282
Alignment:
Q  99 taataaaaataacttattcataagcatttatataacaagcgcttatgctataa 151  Q
    ||||||||||| ||||||| ||||||||||| | | ||||| |||||||||||    
T  33464230 taataaaaatagcttattcgtaagcatttatttgataagcgtttatgctataa 33464282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 37063163 - 37063235
Alignment:
Q  79 tgacttgactttatcttgtgtaataaaaataacttattcataagcatttatataacaagcgcttatgctataa 151  Q
    |||||| | |||||||| ||| ||| |||||  |||| ||||||||||||||| ||||||  |||||||||||    
T  37063163 tgactttattttatcttttgttatagaaatagtttatacataagcatttatatgacaagcatttatgctataa 37063235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 2996622 - 2996567
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||||||||||||| |||||||| ||||||||| ||||| | ||||||||||||    
T  2996622 tcaacttattttcatacgctctccaagatagcttatgaaaacaacttataacttat 2996567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 10192341 - 10192278
Alignment:
Q  15 aagttgatctcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||| | |||||||||||||||| |||||||||||||||||  ||||| | ||||||||||||    
T  10192341 aagttgttttcaacttattttcata-gctctccaggatagcttttgaaaacaacttataacttat 10192278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 50742857 - 50742897
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaa 64  Q
    |||||| |||||||||||||||||||||||||||| |||||    
T  50742857 tcaactcattttcataagctctccaggatagcttatgaaaa 50742897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 56186924 - 56186979
Alignment:
Q  26 aacttattttcataagctctccaggatagcttaagaaaatatcttataacttatga 81  Q
    ||||||||| |||||||||||| ||||| |||| ||||||| ||||||| ||||||    
T  56186924 aacttatttccataagctctcccggataacttatgaaaatagcttataatttatga 56186979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 6987762 - 6987804
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaata 66  Q
    ||||||||||| |||||||||||||||||||| ||| ||||||    
T  6987762 tcaacttatttccataagctctccaggatagcgtaaaaaaata 6987804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 35064779 - 35064733
Alignment:
Q  135 aagcgcttatgctataaattacaaaataatttgtttatccaaacaga 181  Q
    |||||||| ||||||||||| |||| ||| |||||||||||||||||    
T  35064779 aagcgcttttgctataaattgcaaattaagttgtttatccaaacaga 35064733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 56480392 - 56480342
Alignment:
Q  29 ttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||||||||||||||||| ||||| ||| ||||| | ||||||||||||    
T  56480392 ttattttcataagctctccaagatagtttatgaaaacagcttataacttat 56480342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 19422388 - 19422335
Alignment:
Q  90 tatcttgtgtaataaaaataacttattcataagcatttatataacaagcgctta 143  Q
    |||||| ||| ||| ||||||||||| ||||||||||||||| | |||||||||    
T  19422388 tatcttttgttatagaaataacttatacataagcatttatatgataagcgctta 19422335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 24169312 - 24169279
Alignment:
Q  24 tcaacttattttcataagctctccaggatagctt 57  Q
    ||||||||||||||||||||||||| ||||||||    
T  24169312 tcaacttattttcataagctctccaagatagctt 24169279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 58
Target Start/End: Original strand, 39063673 - 39063702
Alignment:
Q  29 ttattttcataagctctccaggatagctta 58  Q
    ||||||||||||||||||||||||||||||    
T  39063673 ttattttcataagctctccaggatagctta 39063702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 43824346 - 43824277
Alignment:
Q  10 ttcaaaagttgatctcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||| |||||| | ||| ||||||| |||||||| ||||||||| |||| ||||| | ||||||||||||    
T  43824346 ttcataagttgttttcagcttatttccataagctttccaggataacttacgaaaaaagcttataacttat 43824277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 27321854 - 27321898
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaatatcttat 72  Q
    |||||| |||||||||||||||||||||||  ||||||| |||||    
T  27321854 cttattgtcataagctctccaggatagcttttgaaaatagcttat 27321898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 28300311 - 28300375
Alignment:
Q  15 aagttgatctcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||| | |||||||||||||||||||||| || |||||| || |||||||  ||||| |||||    
T  28300311 aagttgttttcaacttattttcataagctcttcaagatagcctatgaaaatagtttatagcttat 28300375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 39886719 - 39886763
Alignment:
Q  135 aagcgcttatgctataaattacaaaataatttgtttatccaaaca 179  Q
    ||||| |||||||||||  | ||||||||||||||||||||||||    
T  39886719 aagcgtttatgctataagctgcaaaataatttgtttatccaaaca 39886763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 10216942 - 10216871
Alignment:
Q  109 aacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaacag 180  Q
    |||||||||||||||| ||||||   |||||||||||| ||||  | |||||||| ||||||||||||||||    
T  10216942 aacttattcataagcacttatatggtaagcgcttatgcgataaggtgcaaaataagttgtttatccaaacag 10216871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 10220461 - 10220390
Alignment:
Q  109 aacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaacag 180  Q
    |||||||||||||||| ||||||   |||||||||||| ||||  | |||||||| ||||||||||||||||    
T  10220461 aacttattcataagcacttatatggtaagcgcttatgcgataaggtgcaaaataagttgtttatccaaacag 10220390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 24158525 - 24158579
Alignment:
Q  25 caacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||||||| ||||||||||||||||||||||| ||||| | ||||| ||||||    
T  24158525 caacttatttccataagctctccaggatagcttatgaaaacagcttattacttat 24158579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 3044280 - 3044320
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaa 64  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  3044280 tcaacttattttcataagctctccaggttagcataagaaaa 3044320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 45535234 - 45535286
Alignment:
Q  19 tgatctcaacttattttcataagctctccaggatagcttaagaaaatatctta 71  Q
    |||| ||||||||||||||||| |||||||| |||||||| ||||| ||||||    
T  45535234 tgatttcaacttattttcataaactctccagtatagcttatgaaaacatctta 45535286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 2825192 - 2825149
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaatatctta 71  Q
    ||||||||||||||||||||| ||||||||| ||||||| ||||    
T  2825192 cttattttcataagctctccaagatagcttatgaaaataactta 2825149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 9995925 - 9995854
Alignment:
Q  109 aacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaacag 180  Q
    ||||||||||||| || ||||||   |||||||||||| ||||  | |||||||| ||||||||||||||||    
T  9995925 aacttattcataaccacttatatggtaagcgcttatgcgataaggtgcaaaataagttgtttatccaaacag 9995854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 10105794 - 10105723
Alignment:
Q  109 aacttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaacag 180  Q
    |||||||||||||||| ||||||   |||||||||||  ||||  | |||||||| ||||||||||||||||    
T  10105794 aacttattcataagcacttatatggtaagcgcttatgagataaggtgcaaaataagttgtttatccaaacag 10105723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 39602231 - 39602286
Alignment:
Q  24 tcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||||||||||||||| |||| | ||||||||| ||||| | ||||||||||||    
T  39602231 tcaacttattttcataagttctcaaagatagcttatgaaaacagcttataacttat 39602286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 24280760 - 24280726
Alignment:
Q  24 tcaacttattttcataagctctccaggatagctta 58  Q
    ||||||||||||||||||||||||| |||||||||    
T  24280760 tcaacttattttcataagctctccatgatagctta 24280726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 40665474 - 40665424
Alignment:
Q  28 cttattttcataagctctccaggatagcttaagaaaatatcttataactta 78  Q
    |||||||| |||||||||||| |||| |||| ||||| |||||||||||||    
T  40665474 cttatttttataagctctccaagataacttatgaaaacatcttataactta 40665424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 2719526 - 2719477
Alignment:
Q  15 aagttgatctcaacttattttcataagctctccaggatagcttaagaaaa 64  Q
    |||||| ||||| |||||||||||||| |||||| ||||||||| |||||    
T  2719526 aagttgttctcagcttattttcataagttctccaagatagcttatgaaaa 2719477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 44014946 - 44014983
Alignment:
Q  142 tatgctataaattacaaaataatttgtttatccaaaca 179  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  44014946 tatgctataaactacaaattaatttgtttatccaaaca 44014983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 10226551 - 10226483
Alignment:
Q  112 ttattcataagcatttatataacaagcgcttatgctataaattacaaaataatttgtttatccaaacag 180  Q
    ||||||||||||| ||||||   |||||||||||| ||||  | |||||||  ||||||||||||||||    
T  10226551 ttattcataagcacttatatggtaagcgcttatgcgataaggtgcaaaataggttgtttatccaaacag 10226483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 34383000 - 34382936
Alignment:
Q  15 aagttgatctcaacttattttcataagctctccaggatagcttaagaaaatatcttataacttat 79  Q
    |||||| | ||| ||||||||| |||||| | |||||||||||| ||||| | ||||||||||||    
T  34383000 aagttgttttcatcttattttcttaagcttttcaggatagcttatgaaaagaacttataacttat 34382936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 27557 - 27485
Alignment:
Q  79 tgacttgactttatcttgtgtaataaaaataacttattcataagcatttatataacaagcgcttatgctataa 151  Q
    |||||| | |||||||| ||| ||| ||||||||||| |||||||| ||| || | ||| |||||||||||||    
T  27557 tgactttattttatcttctgttatagaaataacttatacataagcacttacatgataagagcttatgctataa 27485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University