View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2928_low_3 (Length: 316)

Name: NF2928_low_3
Description: NF2928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2928_low_3
NF2928_low_3
[»] chr4 (2 HSPs)
chr4 (11-314)||(12888485-12888785)
chr4 (71-153)||(46879468-46879551)
[»] chr2 (1 HSPs)
chr2 (11-314)||(36593140-36593439)
[»] chr8 (3 HSPs)
chr8 (11-313)||(20519239-20519538)
chr8 (11-314)||(38149047-38149348)
chr8 (11-314)||(32919043-32919341)
[»] chr3 (1 HSPs)
chr3 (11-314)||(49358794-49359096)
[»] chr6 (3 HSPs)
chr6 (15-306)||(22696786-22697074)
chr6 (109-313)||(34501223-34501420)
chr6 (11-106)||(34502715-34502810)
[»] chr7 (3 HSPs)
chr7 (12-306)||(36934480-36934773)
chr7 (147-306)||(5888772-5888932)
chr7 (35-151)||(5892651-5892769)
[»] chr5 (3 HSPs)
chr5 (112-305)||(27631784-27631977)
chr5 (11-132)||(36607593-36607717)
chr5 (44-93)||(27631967-27632018)
[»] chr1 (1 HSPs)
chr1 (12-155)||(32946613-32946756)


Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 314
Target Start/End: Original strand, 12888485 - 12888785
Alignment:
Q  11 catcatcatcgccacacccttgagctcaccaccacacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccgtcacttgtgatatcca 110  Q
    |||||||||||||||||  |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||| |||    
T  12888485 catcatcatcgccacac--ttgaactcaccac-acacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccaccacctgtgataccca 12888581  T
Q  111 tcaccaacaaccaccaaaatcaccatcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatccccc 210  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| ||     
T  12888582 tcaccaacaaccaccaaaattaccatcaactcaataaaccatgaccttagatttgagatcaccacacgcagactgcatcaccaccacttggacatcacct 12888681  T
Q  211 aagacagcaacattactccctgcatcacctccattcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccgacaca 310  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| | ||||| |||||||||||||||| |||    
T  12888682 aagacagcaacaccactccctgcatcacctccatttgaaacttcaccaaaaacagcagcacattaacaacaacaccactacaacatcaccaaccgaaaca 12888781  T
Q  311 tctc 314  Q
    ||||    
T  12888782 tctc 12888785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 46879551 - 46879468
Alignment:
Q  71 ctcccaactcaacaccaacaaccgtca-cttgtgatatccatcaccaacaaccaccaaaatcaccatcaactcaataaaccatg 153  Q
    |||||||||||||||||||||||  || |||| |||| ||||||| ||||| ||| ||||||||||| ||||||||||| ||||    
T  46879551 ctcccaactcaacaccaacaaccaccatcttgagatacccatcacaaacaatcactaaaatcaccattaactcaataaaacatg 46879468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 11 - 314
Target Start/End: Original strand, 36593140 - 36593439
Alignment:
Q  11 catcatcatcgccacacccttgagctcaccaccacacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccgtcacttgtgatatcca 110  Q
    ||||||||||||| |||||  || ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||   |||||||||| |||    
T  36593140 catcatcatcgccccacccccgaactccccacc-cacaagaaagagacagtaaacttcgcctcccaactcaacaccaaccacc---acttgtgataccca 36593235  T
Q  111 tcaccaacaaccaccaaaatcaccatcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatccccc 210  Q
    |||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |  || ||| |||||||||||||||||||||  ||    
T  36593236 tcacaaacaaccaccaaaataaccatcaactcaataatccatgaccttagatctgagatcaccaaacacagactacatcaccaccacttggacatcatcc 36593335  T
Q  211 aagacagcaacattactccctgcatcacctccattcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccgacaca 310  Q
    || |||||||||  |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||  |||||| ||||||||||||||| |||    
T  36593336 aaaacagcaacaccactccctgcatcacctccattcgaaacttcacaaaaaacagtagcacactaacaacactaccactctaacatcaccaaccgaaaca 36593435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 11 - 313
Target Start/End: Original strand, 20519239 - 20519538
Alignment:
Q  11 catcatcatcgccacacccttgagctcaccaccacacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccgtcacttgtgatatcca 110  Q
    |||||||||||||| ||||  || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||   |||| ||||| |||    
T  20519239 catcatcatcgccatacccccgaactcaccaccacacaagaaagagacaataaacttcgcctcccaactcaacaccaaccacc---acttatgataccca 20519335  T
Q  111 tcaccaacaaccaccaaaatcaccatcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatccccc 210  Q
    ||||||||||||||||||||| |||||||| |||| |||||||| ||||||||||||||||| | | ||| |||  |||||||||||||||||||| ||     
T  20519336 tcaccaacaaccaccaaaatctccatcaacacaatcaaccatgatcttagatctgagatcacaaaacgcagactcaatcaccaccacttggacatcacct 20519435  T
Q  211 aagacagcaacattactccctgcatcacctccattcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccgacaca 310  Q
    || ||||||||| |||||||| |||||||||||||| ||||||||||||||||||  |||||||||||||||  |||||| ||||||||||||||| |||    
T  20519436 aaaacagcaacactactccctacatcacctccattcaaaacttcaccaaaaacagttgcacactaacaacactaccactctaacatcaccaaccgaaaca 20519535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 11 - 314
Target Start/End: Complemental strand, 38149348 - 38149047
Alignment:
Q  11 catcatcatcgccacaccctt-gagctcaccaccacacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccgtcacttgtgatatcc 109  Q
    |||||||||||||||||||   || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||   ||||||||||  |    
T  38149348 catcatcatcgccacaccccccgaactcaccaccacacaagaaagagacaataaacttcgcctcccaactcaacaccaaccacc---acttgtgatactc 38149252  T
Q  110 atcaccaacaaccaccaaaatcaccatcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatcccc 209  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |  || |||||||||||||||||   |||||  |    
T  38149251 atcaccaacaaccaccaaaataaccatcaactcaataaaccatgaccttagatctgagatcaccaaacacagactgcatcaccaccactgtcacatcatc 38149152  T
Q  210 caagacagcaacattactccctgcatcacctccattcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccgacac 309  Q
    ||| |||| | ||  |||||||||||||||||||||| ||||||||| |||||||| |||||||||| |||||  ||| || ||||||||||||||| ||    
T  38149151 caaaacagaagcaccactccctgcatcacctccattcaaaacttcacaaaaaacagtagcacactaataacactaccattctaacatcaccaaccgaaac 38149052  T
Q  310 atctc 314  Q
    |||||    
T  38149051 atctc 38149047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 11 - 314
Target Start/End: Complemental strand, 32919341 - 32919043
Alignment:
Q  11 catcatcatcgccacacccttgagctcaccaccacacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccgtcacttgtgatatcca 110  Q
    ||||||||| |||||||||  || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||   |||||||||| |||    
T  32919341 catcatcattgccacacccacgaactcaccaccacacaagaaagagatagtgaacttcgcctcccaactcaacaccaaccacc---acttgtgataccca 32919245  T
Q  111 tcaccaacaaccaccaaaatcaccatcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatccccc 210  Q
    |||||||||||||||||| | |||||||||||||||||  |||||||||||| ||||||||||| |  || ||||||||||||||||||| |||||  ||    
T  32919244 tcaccaacaaccaccaaa-taaccatcaactcaataaattatgaccttagatatgagatcaccaaacacagactgcatcaccaccacttgaacatcatcc 32919146  T
Q  211 aagacagcaacattactccctgcatcacctccattcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccgacaca 310  Q
    || |||||| ||  ||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||  |||||| ||||||||||||||| |||    
T  32919145 aaaacagcagcac-actccttgcatcacctccattcgaaacttcacaaaaaacagtagcacactaacaacactgccactctaacatcaccaaccgaaaca 32919047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 11 - 314
Target Start/End: Original strand, 49358794 - 49359096
Alignment:
Q  11 catcatcatcgccacacccttgagctcaccaccacacaagaaagagacagtaaac--ttcgcctcccaactcaacaccaacaaccgtcacttgtgatatc 108  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||||||| |||  ||||||| ||| ||||||||||| ||||  ||||||||||| |    
T  49358794 catcatcatcgccacacccctgaactcaccgccacacaagaaagagacagtgaacatttcgccttccacctcaacaccaaaaaccaccacttgtgatacc 49358893  T
Q  109 catcaccaacaaccaccaaaatcaccatcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatccc 208  Q
    |||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||| |||||||||||   ||||||||||||||| |    
T  49358894 catcaccaacaaccaccaaaatcaccatgaacttaataaaccataaccttagatctgatatcaccacacgcaaactgcat---caccacttggacatcac 49358990  T
Q  209 ccaagacagcaacattactccctgcatcacctccattcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccgaca 308  Q
    ||||||||| || |  | ||||| |||||||| ||||||||||||||||||||||| || |||||||||||||||  |||||||||||||||||| || |    
T  49358991 ccaagacaggaagaccattccctacatcaccttcattcgaaacttcaccaaaaacaacatcacactaacaacaccaacactccaacatcaccaacagaaa 49359090  T
Q  309 catctc 314  Q
    ||||||    
T  49359091 catctc 49359096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 15 - 306
Target Start/End: Original strand, 22696786 - 22697074
Alignment:
Q  15 atcatcgccacacccttgagctcaccaccacacaagaaagagacagtaaac--ttcgcctcccaactcaacaccaacaaccgtcacttgtgatatccatc 112  Q
    |||||||||||||||   | ||||||||||||||||||||||||||| |||  ||||||||||| || |||||||||||||  ||||||||||| | |||    
T  22696786 atcatcgccacacccccaaactcaccaccacacaagaaagagacagtgaacatttcgcctcccagctaaacaccaacaaccaccacttgtgataccgatc 22696885  T
Q  113 accaacaaccaccaaaatcaccatcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatcccccaa 212  Q
    |||||||||||      |||||||||||||||||| |||||||||||||||||||||||||||| | | ||||||||||| ||||||||||||| |||||    
T  22696886 accaacaacca------tcaccatcaactcaataatccatgaccttagatctgagatcaccacacgtagactgcatcaccgccacttggacatcacccaa 22696979  T
Q  213 gacagcaacattactccctgcatcacctccattcgaaacttcaccaaaaacagcagcacact-aacaacacccccactccaacatcaccaaccga 306  Q
    |||||||||| | |||||| |||||||||||||| |||||||||||||||||| ||| |||| ||||||||| ||||| ||||||||||| ||||    
T  22696980 gacagcaacactgctccctacatcacctccattcaaaacttcaccaaaaacagtagctcactaaacaacaccaccacttcaacatcaccagccga 22697074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 109 - 313
Target Start/End: Complemental strand, 34501420 - 34501223
Alignment:
Q  109 catcaccaacaaccaccaaaatcaccatcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatccc 208  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||| |||       |||||| ||| |||||||||| |||||||||||||| |    
T  34501420 catcaccaacaaccactaaaatcaccatcaactcaatataccatgaccttatatc-------accacacgcagactgcatcactaccacttggacatcac 34501328  T
Q  209 ccaagacagcaacattactccctgcatcacctccattcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccgaca 308  Q
    ||||||||||||||  ||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||| |    
T  34501327 ccaagacagcaacaccactcccaacatcacctccattcgaaacttcaccaaaaatagtagcacactaacaacaccaccactccaacatcaccaaccgaaa 34501228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 34502810 - 34502715
Alignment:
Q  11 catcatcatcgccacacccttgagctcaccaccacacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccgtcacttgtgata 106  Q
    |||||||||| |||||||||  | |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||    
T  34502810 catcatcatctccacaccctcaaactcaccaccacagaagaaagagacagtaaacttcgcctcccaactcaacagcaacaaccaccacttgtgata 34502715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 9e-70; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 12 - 306
Target Start/End: Original strand, 36934480 - 36934773
Alignment:
Q  12 atcatcatcgccacacccttgagctcaccaccacacaagaaagagacagtaaac--ttcgcctcccaactcaacaccaacaaccgtcacttgtgatatcc 109  Q
    |||||||||||||||||   || ||||||||||||  |||| |||||||| ||   |||||||||||||||||||||||  |||  ||||||||||| ||    
T  36934480 atcatcatcgccacacctccgaactcaccaccaca--agaa-gagacagtgaatatttcgcctcccaactcaacaccaaacaccaccacttgtgataccc 36934576  T
Q  110 atcaccaacaaccaccaaaatcaccatcaactcaataaaccatgaccttagatctga-gatcaccacatgcaaactgcatcaccaccacttggacatccc 208  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||||| ||||||| ||||||||||  ||  |||||||||||||||||||||||| |    
T  36934577 atcaccaacaaccaccaaaattaccatcaac--aataaaccatgaccttcgatctgaagatcaccacactcaggctgcatcaccaccacttggacatcac 36934674  T
Q  209 ccaagacagcaacattactccctgcatcacctccattcgaaacttcacc-aaaaacagcagcacactaacaacacccccactccaacatcaccaaccga 306  Q
    |||||| |||| ||  |||||||||||||||||| |||||||||||||| ||||||| |||| ||||||||||||| ||||||| ||||||||||||||    
T  36934675 ccaagatagcagcaccactccctgcatcacctcccttcgaaacttcaccaaaaaacaacagcgcactaacaacaccaccactccgacatcaccaaccga 36934773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 147 - 306
Target Start/End: Complemental strand, 5888932 - 5888772
Alignment:
Q  147 aaccatgaccttagatctga-gatcaccacatgcaaactgcatcaccaccacttggacatcccccaagacagcaacattactccctgcatcacctccatt 245  Q
    ||||| |||||||||| ||| |||||||||||||| ||| ||||||||||||||||||||| ||||||| |||||||  ||||  |||| ||||||||||    
T  5888932 aaccacgaccttagatatgaagatcaccacatgcagactacatcaccaccacttggacatcacccaagatagcaacaccactctatgcagcacctccatt 5888833  T
Q  246 cgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccga 306  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||    
T  5888832 cgaaacttcaccaaaaacagcagcacactaacaacaccaacactccgacatcaccaaccga 5888772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 5892769 - 5892651
Alignment:
Q  35 ctcaccaccacacaagaaagagacagtaaac--ttcgcctcccaactcaacaccaacaaccgtcacttgtgatatccatcaccaacaaccaccaaaatca 132  Q
    ||||| ||||||||||||||||||||| |||  |||||||||||||| ||||||||  |||  ||||||||||| ||||||| ||| | |||||||||||    
T  5892769 ctcacaaccacacaagaaagagacagtgaacatttcgcctcccaacttaacaccaaacaccaccacttgtgatacccatcactaacgaacaccaaaatca 5892670  T
Q  133 ccatcaactcaataaacca 151  Q
    |||||||||||||| ||||    
T  5892669 ccatcaactcaatacacca 5892651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 112 - 305
Target Start/End: Complemental strand, 27631977 - 27631784
Alignment:
Q  112 caccaacaaccaccaaaatcaccatcaactcaataaaccatgaccttagatctgagatcaccacatgcaaactgcatcaccaccacttggacatccccca 211  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| |||||||||||  |||||||| ||||    
T  27631977 caccaacaaccaccaaaatcaccatcaactcaataaatcattaccttagatctgagatcaccacatgcagactacatcaccaccatgtggacatcaccca 27631878  T
Q  212 agacagcaacattactccctgcatcacctccattcgaaacttcaccaaaaacagcagcacactaacaacacccccactccaacatcaccaaccg 305  Q
    |||  ||| ||  |||||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||| | |||||||||||||||||||    
T  27631877 agatggcatcaccactccctgcaccacctccattcaaaacatcaccaaaaatagcagcacactaacaacaccactactccaacatcaccaaccg 27631784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 36607717 - 36607593
Alignment:
Q  11 catcatcatcgccacacccttgagctcaccaccacacaagaaagagacagtaaac--ttcgcctcccaactcaacaccaaca-accgtcacttgtgatat 107  Q
    |||||||||| ||||||||  || ||||| | ||||| ||||||||||| | |||  ||||||||||||||||||||||| | |||  |||| ||||||     
T  36607717 catcatcatcaccacacccccgaactcactatcacacgagaaagagacattgaacatttcgcctcccaactcaacaccaaaacaccaccactcgtgatac 36607618  T
Q  108 ccatcaccaacaaccaccaaaatca 132  Q
    ||||||| |||||||||||||||||    
T  36607617 ccatcactaacaaccaccaaaatca 36607593  T

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Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 27632018 - 27631967
Alignment:
Q  44 acacaagaaagagacagtaaac--ttcgcctcccaactcaacaccaacaacc 93  Q
    |||||||||||||||| | |||  ||||||||||||||||||||||||||||    
T  27632018 acacaagaaagagacaatgaacatttcgcctcccaactcaacaccaacaacc 27631967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 32946756 - 32946613
Alignment:
Q  12 atcatcatcgccacacccttgagctcaccaccacacaagaaagagacagtaaacttcgcctcccaactcaacaccaacaaccgtcacttgtgatatccat 111  Q
    |||||| || ||||||||  || |||||||||||||||||||||    | | | |||||||||||| |||||| ||||||||  |||||||||||   ||    
T  32946756 atcatcgtcaccacacccacgaactcaccaccacacaagaaagacggtgaacatttcgcctcccaaatcaacatcaacaaccaccacttgtgatacatat 32946657  T
Q  112 caccaacaaccaccaaaatcaccatcaactcaataaaccatgac 155  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  32946656 caccaacaaccaccaaaattaccattaactcaataaaccatgac 32946613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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