View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2930_high_22 (Length: 259)
Name: NF2930_high_22
Description: NF2930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2930_high_22 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 45746519 - 45746763
Alignment:
| Q |
1 |
caacaaaaacaaagtcagttaattgttacaaattacagtatctatattaatacaaatgcaataactgttgtgtttaacaagtttttaaatcaaatttgta |
100 |
Q |
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| T |
45746519 |
caacaaaaacaaagtcagttaattgttacaaattacagtatctatattaatacaaatgcaataactgttgtgtttaacaagtttttaaatcacatttgta |
45746618 |
T |
|
| Q |
101 |
atctttgatattatggagaatcacaaacaaaagcagcttaggcaaccttgttgtggagacattaaaaaccttaatgccacaactcagatcgcgagtgcag |
200 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |
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| T |
45746619 |
atctttgatattatggagaatcacaaacaaaagcggcttaggcaaccttgttgtggagacattaaaaaccttaatgccgcaactcagatcgcgactgcag |
45746718 |
T |
|
| Q |
201 |
atttttaaaagaaaatggaacatgatatttaacattcaccttcat |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45746719 |
atttttaaaagaaaatggaacatgatatttaacattcaccttcat |
45746763 |
T |
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