View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2930_low_33 (Length: 248)
Name: NF2930_low_33
Description: NF2930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2930_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 12417471 - 12417704
Alignment:
| Q |
1 |
aaggtagaccatttaacaccttacaaagtgcctatgtacctttctcatttttatgaattagcttatgattcctcactcatatcaacaatttcaaaattgt |
100 |
Q |
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| T |
12417471 |
aaggtagaccatttaacaccttacaaagtgcctatgtacctttctcatttttatgaattagcttatgattcgtcactcatatcaacaatttcaaaattgt |
12417570 |
T |
|
| Q |
101 |
tctccaatacaacattcacctcgataaattttttaagaagatcataatgcaagaaaaaataagttactgtaagacttataagtaaatattgggcgtgggg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12417571 |
tctccaatacaacattcacctcgataaattttttaagaagatcataatgcaagaaaaaataagttactgtaagacttataagtaaatattgggcgtgggg |
12417670 |
T |
|
| Q |
201 |
ggaagctttttgtggctttacttttctttagttt |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
12417671 |
ggaagctttttgtggctttacttttctttagttt |
12417704 |
T |
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