View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2931R-Insertion-11 (Length: 136)

Name: NF2931R-Insertion-11
Description: NF2931R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2931R-Insertion-11
NF2931R-Insertion-11
[»] chr8 (44 HSPs)
chr8 (9-91)||(39666974-39667056)
chr8 (9-62)||(37295122-37295175)
chr8 (9-56)||(24654976-24655023)
chr8 (9-56)||(25250787-25250834)
chr8 (9-63)||(6317295-6317349)
chr8 (9-59)||(25893850-25893900)
chr8 (9-59)||(41897823-41897873)
chr8 (9-56)||(2733618-2733665)
chr8 (9-56)||(4430814-4430861)
chr8 (9-56)||(8569947-8569994)
chr8 (9-56)||(26690696-26690743)
chr8 (9-56)||(38070560-38070607)
chr8 (9-56)||(41746727-41746774)
chr8 (10-56)||(4977114-4977160)
chr8 (9-59)||(23681009-23681059)
chr8 (9-59)||(26675556-26675606)
chr8 (9-59)||(34540143-34540193)
chr8 (9-55)||(41278604-41278650)
chr8 (9-55)||(44814866-44814912)
chr8 (9-54)||(33067467-33067512)
chr8 (9-61)||(19649577-19649629)
chr8 (9-61)||(34711634-34711686)
chr8 (108-136)||(39667070-39667098)
chr8 (9-56)||(2527204-2527251)
chr8 (9-56)||(3054026-3054073)
chr8 (9-56)||(4312135-4312182)
chr8 (9-56)||(6845062-6845109)
chr8 (9-56)||(7772129-7772176)
chr8 (9-56)||(8547209-8547256)
chr8 (9-56)||(11100367-11100414)
chr8 (9-56)||(11265135-11265182)
chr8 (9-56)||(14188092-14188139)
chr8 (14-61)||(14243696-14243743)
chr8 (9-56)||(17649920-17649967)
chr8 (9-56)||(18040138-18040185)
chr8 (9-56)||(20150223-20150270)
chr8 (9-56)||(25199048-25199095)
chr8 (9-56)||(25213631-25213678)
chr8 (9-56)||(26737973-26738020)
chr8 (9-56)||(27928160-27928207)
chr8 (9-56)||(36586484-36586531)
chr8 (9-56)||(38953559-38953606)
chr8 (13-56)||(40744325-40744368)
chr8 (9-56)||(43820870-43820917)
[»] chr5 (31 HSPs)
chr5 (9-56)||(23310402-23310449)
chr5 (9-56)||(9054050-9054097)
chr5 (9-59)||(29119605-29119655)
chr5 (9-61)||(1244260-1244312)
chr5 (9-61)||(17869203-17869255)
chr5 (9-53)||(36319581-36319625)
chr5 (9-56)||(2103028-2103075)
chr5 (9-56)||(4164961-4165008)
chr5 (9-56)||(6029614-6029661)
chr5 (9-56)||(6672243-6672290)
chr5 (9-56)||(9902580-9902627)
chr5 (9-56)||(12878197-12878244)
chr5 (9-56)||(18473916-18473963)
chr5 (9-56)||(22620730-22620777)
chr5 (9-56)||(23311252-23311299)
chr5 (9-56)||(24443946-24443993)
chr5 (9-56)||(28143311-28143358)
chr5 (9-56)||(36569281-36569328)
chr5 (9-56)||(36726991-36727038)
chr5 (9-56)||(38682930-38682977)
chr5 (9-56)||(41562460-41562507)
chr5 (9-55)||(25328383-25328429)
chr5 (9-55)||(33028233-33028279)
chr5 (9-56)||(1269598-1269645)
chr5 (9-56)||(11968778-11968825)
chr5 (9-56)||(12707955-12708002)
chr5 (9-56)||(14808837-14808884)
chr5 (9-56)||(24051405-24051452)
chr5 (9-56)||(29806569-29806616)
chr5 (9-52)||(37191250-37191293)
chr5 (9-56)||(42448213-42448260)
[»] chr1 (26 HSPs)
chr1 (9-61)||(24119653-24119705)
chr1 (9-55)||(15104047-15104093)
chr1 (9-61)||(39522837-39522889)
chr1 (9-61)||(43676103-43676155)
chr1 (9-56)||(4126577-4126624)
chr1 (9-56)||(10635491-10635538)
chr1 (9-56)||(18475111-18475158)
chr1 (9-56)||(19338257-19338304)
chr1 (9-56)||(28999376-28999423)
chr1 (9-56)||(29005092-29005139)
chr1 (9-56)||(40809292-40809339)
chr1 (9-56)||(40958653-40958700)
chr1 (9-56)||(42631064-42631111)
chr1 (9-56)||(48314169-48314216)
chr1 (9-56)||(48391958-48392005)
chr1 (9-59)||(40962781-40962831)
chr1 (9-59)||(41445109-41445159)
chr1 (13-61)||(8194045-8194093)
chr1 (16-56)||(29510737-29510777)
chr1 (9-53)||(43086550-43086594)
chr1 (9-53)||(49500866-49500910)
chr1 (9-56)||(3315796-3315843)
chr1 (9-56)||(17068154-17068201)
chr1 (9-56)||(22561246-22561293)
chr1 (9-56)||(43025888-43025935)
chr1 (9-56)||(49948243-49948290)
[»] chr7 (31 HSPs)
chr7 (9-56)||(6327213-6327260)
chr7 (9-56)||(6596544-6596591)
chr7 (9-56)||(7312532-7312579)
chr7 (9-53)||(2286172-2286216)
chr7 (9-56)||(2354876-2354923)
chr7 (9-56)||(3497596-3497643)
chr7 (9-56)||(4069195-4069242)
chr7 (9-56)||(4887592-4887639)
chr7 (9-56)||(27396393-27396440)
chr7 (9-56)||(29151585-29151632)
chr7 (9-56)||(35157163-35157210)
chr7 (9-56)||(45236932-45236979)
chr7 (9-56)||(48612519-48612566)
chr7 (9-56)||(48729763-48729810)
chr7 (10-56)||(6384598-6384644)
chr7 (9-59)||(38261000-38261050)
chr7 (9-54)||(17895638-17895683)
chr7 (9-53)||(10061095-10061139)
chr7 (9-53)||(33512802-33512846)
chr7 (9-53)||(45946715-45946759)
chr7 (9-53)||(47182808-47182852)
chr7 (9-56)||(1323685-1323732)
chr7 (9-56)||(1573920-1573967)
chr7 (9-56)||(4106556-4106603)
chr7 (9-56)||(9379993-9380040)
chr7 (9-56)||(18944926-18944973)
chr7 (9-56)||(19306714-19306761)
chr7 (9-56)||(31717299-31717346)
chr7 (9-56)||(35849297-35849344)
chr7 (9-56)||(40809047-40809094)
chr7 (9-56)||(44327642-44327689)
[»] chr4 (34 HSPs)
chr4 (9-56)||(7512769-7512816)
chr4 (9-56)||(14285097-14285144)
chr4 (9-56)||(29428057-29428104)
chr4 (9-59)||(35828273-35828323)
chr4 (9-59)||(52556462-52556512)
chr4 (9-61)||(23974721-23974773)
chr4 (9-57)||(33416659-33416707)
chr4 (9-61)||(42154217-42154269)
chr4 (9-56)||(5397019-5397066)
chr4 (9-56)||(9569477-9569524)
chr4 (9-56)||(12821167-12821214)
chr4 (9-56)||(28010130-28010177)
chr4 (9-56)||(30044663-30044710)
chr4 (9-56)||(42856565-42856612)
chr4 (9-56)||(46488196-46488243)
chr4 (9-56)||(49535887-49535934)
chr4 (9-56)||(49882788-49882835)
chr4 (9-55)||(1033528-1033574)
chr4 (9-63)||(24712083-24712137)
chr4 (9-59)||(37050700-37050750)
chr4 (9-55)||(47462115-47462161)
chr4 (9-55)||(54907971-54908017)
chr4 (9-54)||(37166142-37166187)
chr4 (12-56)||(1982563-1982607)
chr4 (9-53)||(11673298-11673342)
chr4 (9-56)||(3084321-3084368)
chr4 (9-56)||(3848897-3848944)
chr4 (9-56)||(4379309-4379356)
chr4 (9-60)||(4901920-4901971)
chr4 (9-56)||(12694525-12694572)
chr4 (9-56)||(13389022-13389069)
chr4 (9-56)||(24550815-24550862)
chr4 (9-56)||(35318542-35318589)
chr4 (9-60)||(51425328-51425379)
[»] chr3 (39 HSPs)
chr3 (9-56)||(4976787-4976834)
chr3 (9-61)||(3917763-3917815)
chr3 (9-61)||(46894810-46894862)
chr3 (9-56)||(2687561-2687608)
chr3 (9-56)||(4232256-4232303)
chr3 (9-56)||(4833188-4833235)
chr3 (9-56)||(6583314-6583361)
chr3 (9-56)||(8381081-8381128)
chr3 (9-56)||(13525171-13525218)
chr3 (9-56)||(27396856-27396903)
chr3 (9-56)||(42296714-42296760)
chr3 (9-55)||(11312593-11312639)
chr3 (10-56)||(37312530-37312576)
chr3 (9-59)||(48191093-48191143)
chr3 (9-62)||(12948806-12948859)
chr3 (9-66)||(50238919-50238976)
chr3 (9-53)||(10473993-10474037)
chr3 (9-53)||(24751758-24751802)
chr3 (9-53)||(29212144-29212188)
chr3 (9-61)||(44037523-44037575)
chr3 (8-56)||(53583963-53584011)
chr3 (9-56)||(6083220-6083267)
chr3 (9-56)||(15003630-15003677)
chr3 (9-56)||(22371452-22371499)
chr3 (9-56)||(24250727-24250774)
chr3 (9-56)||(24650626-24650673)
chr3 (9-56)||(24910367-24910414)
chr3 (9-56)||(28266528-28266575)
chr3 (9-56)||(30553047-30553094)
chr3 (13-56)||(32961061-32961104)
chr3 (9-56)||(34397682-34397729)
chr3 (9-56)||(38127921-38127968)
chr3 (9-56)||(41464666-41464713)
chr3 (9-56)||(43605655-43605702)
chr3 (9-56)||(43898042-43898089)
chr3 (9-60)||(46311522-46311573)
chr3 (9-56)||(46838806-46838853)
chr3 (9-56)||(47408842-47408889)
chr3 (9-56)||(54097519-54097566)
[»] chr2 (29 HSPs)
chr2 (9-60)||(16368767-16368818)
chr2 (9-56)||(42200941-42200988)
chr2 (9-61)||(20251564-20251616)
chr2 (9-61)||(42160336-42160388)
chr2 (9-56)||(2287388-2287435)
chr2 (9-56)||(7958063-7958110)
chr2 (9-56)||(15897216-15897263)
chr2 (9-56)||(23080177-23080224)
chr2 (9-56)||(32023254-32023301)
chr2 (9-60)||(34481750-34481801)
chr2 (9-56)||(34667046-34667093)
chr2 (9-56)||(36754820-36754867)
chr2 (9-56)||(38490479-38490526)
chr2 (9-56)||(43035442-43035489)
chr2 (9-59)||(39310365-39310415)
chr2 (9-62)||(12236117-12236170)
chr2 (10-55)||(25510382-25510427)
chr2 (9-54)||(28855493-28855538)
chr2 (9-53)||(4014892-4014936)
chr2 (9-53)||(7975093-7975137)
chr2 (9-56)||(727368-727415)
chr2 (9-56)||(6731544-6731591)
chr2 (9-56)||(13268054-13268101)
chr2 (13-56)||(33607045-33607088)
chr2 (9-56)||(35476569-35476616)
chr2 (9-56)||(35687865-35687912)
chr2 (9-56)||(39070021-39070068)
chr2 (9-56)||(40592315-40592362)
chr2 (9-56)||(44948021-44948068)
[»] chr6 (23 HSPs)
chr6 (9-59)||(1241594-1241644)
chr6 (9-59)||(18861846-18861896)
chr6 (9-70)||(21513060-21513121)
chr6 (9-56)||(2314678-2314725)
chr6 (9-56)||(4996874-4996921)
chr6 (9-56)||(8448221-8448268)
chr6 (9-56)||(8457025-8457072)
chr6 (9-56)||(17534602-17534649)
chr6 (9-56)||(31205262-31205309)
chr6 (10-56)||(4128947-4128993)
chr6 (9-59)||(32107914-32107964)
chr6 (9-61)||(12795098-12795150)
chr6 (9-53)||(14982733-14982777)
chr6 (9-56)||(735447-735494)
chr6 (9-60)||(2236232-2236283)
chr6 (9-56)||(4083589-4083636)
chr6 (9-56)||(4480476-4480523)
chr6 (9-56)||(8939628-8939675)
chr6 (9-56)||(10181047-10181094)
chr6 (9-56)||(10263150-10263197)
chr6 (9-56)||(10531388-10531435)
chr6 (9-56)||(13540240-13540287)
chr6 (9-56)||(27866590-27866637)
[»] scaffold0432 (1 HSPs)
scaffold0432 (9-56)||(9369-9416)
[»] scaffold0402 (1 HSPs)
scaffold0402 (9-56)||(1320-1367)
[»] scaffold0287 (1 HSPs)
scaffold0287 (9-56)||(1137-1184)
[»] scaffold0457 (1 HSPs)
scaffold0457 (9-55)||(6782-6828)
[»] scaffold0163 (1 HSPs)
scaffold0163 (9-53)||(26996-27040)
[»] scaffold0179 (1 HSPs)
scaffold0179 (9-56)||(4094-4141)
[»] scaffold0061 (1 HSPs)
scaffold0061 (9-56)||(8938-8985)
[»] scaffold0013 (1 HSPs)
scaffold0013 (13-56)||(90571-90614)
[»] scaffold0008 (1 HSPs)
scaffold0008 (9-56)||(39392-39439)


Alignment Details
Target: chr8 (Bit Score: 63; Significance: 9e-28; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 9e-28
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 39666974 - 39667056
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaatttcatttagttttttaactcgtgtgtaagcat 91  Q
    |||||||||||||||||  | |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39666974 atccggcctaacaatttcggcattttgtcagttgagttaggacttctgaatttcatttagttttttaactcgtgtgtaagcat 39667056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 37295175 - 37295122
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaatttc 62  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||||||||    
T  37295175 atccggcctaacaatttcggcattttgccagttgagctaggacttctgaatttc 37295122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 24655023 - 24654976
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||||    
T  24655023 atccggcctaacaattttggcattttgccagttgagctaggacttctg 24654976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 25250834 - 25250787
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||||    
T  25250834 atccggcctaacaattttggcattttgccagttgagctaggacttctg 25250787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 6317349 - 6317295
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaatttca 63  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||| ||||||    
T  6317349 atccggcctaacaatttcggcattttgccagttgagctaggacttctggatttca 6317295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 25893900 - 25893850
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  25893900 atccggcctaacaatttcagcattttgccagttgagctaggacttctgaat 25893850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 41897873 - 41897823
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    |||||||||||||||||  |||||||| |||||||| ||||||||||||||    
T  41897873 atccggcctaacaatttcggtattttgtcagttgagttaggacttctgaat 41897823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 2733665 - 2733618
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  2733665 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 2733618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 4430814 - 4430861
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  4430814 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 4430861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 8569994 - 8569947
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  || ||||| ||||||||||||||||||||    
T  8569994 atccggcctaacaatttcggtcttttgccagttgagctaggacttctg 8569947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 26690743 - 26690696
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  26690743 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 26690696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 38070560 - 38070607
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  38070560 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 38070607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 41746727 - 41746774
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||| |||||| | |||||| ||||||||||||||||||||    
T  41746727 atccggcctaataattttggcattttgtcagttgagctaggacttctg 41746774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 4977114 - 4977160
Alignment:
Q  10 tccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||||||||  | |||||| ||||||||||||||||||||    
T  4977114 tccggcctaacaatttcggcattttgccagttgagctaggacttctg 4977160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 23681059 - 23681009
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    ||||||||||| |||||| | |||||| |||||||| ||||||||||||||    
T  23681059 atccggcctaataattttggcattttgccagttgagttaggacttctgaat 23681009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 26675606 - 26675556
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    |||||||||||||||||  | |||||  |||||||||||||||||||||||    
T  26675606 atccggcctaacaatttcggcattttaccagttgagctaggacttctgaat 26675556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 34540143 - 34540193
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    |||||||||||||||||  | |||||| ||||||| |||||||||||||||    
T  34540143 atccggcctaacaatttcggcattttgccagttgaactaggacttctgaat 34540193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 41278650 - 41278604
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttct 55  Q
    |||| ||||||||||||| |||||||| ||||||||||| |||||||    
T  41278650 atccagcctaacaattttggtattttgccagttgagctaagacttct 41278604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 44814912 - 44814866
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttct 55  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||    
T  44814912 atccggcctaacaatttcggcattttgccagttgagctaggacttct 44814866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 33067467 - 33067512
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttc 54  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||    
T  33067467 atccggcctaacaatttcggcattttgccagttgagctaggacttc 33067512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 19649577 - 19649629
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    |||||||||||||||||  | |||||| ||||||||||| |||||||| ||||    
T  19649577 atccggcctaacaatttcggcattttgccagttgagctatgacttctggattt 19649629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 34711634 - 34711686
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    ||||| |||||||||||  | |||||| |||||||||||||||||||| ||||    
T  34711634 atccgacctaacaatttcggcattttgccagttgagctaggacttctggattt 34711686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 136
Target Start/End: Original strand, 39667070 - 39667098
Alignment:
Q  108 atcgtaaatactgttaattttatagcata 136  Q
    |||||||||||||||||||||||||||||    
T  39667070 atcgtaaatactgttaattttatagcata 39667098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 2527251 - 2527204
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||| |||||||||| | |||||| ||||||||||| ||||||||    
T  2527251 atccggcttaacaattttgggattttgccagttgagctaagacttctg 2527204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 3054073 - 3054026
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| |||||||||||| |||||||    
T  3054073 atccggcctaacaatttcggcattttgccagttgagctagaacttctg 3054026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 4312182 - 4312135
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||| |||||||||||  | |||||| ||||||||||||||||||||    
T  4312182 atccgacctaacaatttcggcattttgccagttgagctaggacttctg 4312135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 6845062 - 6845109
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| || |||||||||||||||||    
T  6845062 atccggcctaacaatttcggcattttgccaattgagctaggacttctg 6845109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 7772129 - 7772176
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||  ||||||||||||||||||||    
T  7772129 atccggcctaacaatttcggcattttaccagttgagctaggacttctg 7772176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 8547209 - 8547256
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||| |||||||||||  | |||||| ||||||||||||||||||||    
T  8547209 atccgacctaacaatttcggcattttgccagttgagctaggacttctg 8547256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 11100367 - 11100414
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||  ||||||||||||||||||||    
T  11100367 atccggcctaacaatttcggcatttttccagttgagctaggacttctg 11100414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 11265135 - 11265182
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||||||||||   |||||| ||||||| ||||||||||||    
T  11265135 atccggcctaacaattttgacattttgtcagttgaactaggacttctg 11265182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 14188139 - 14188092
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||    |||||| ||||||||||||||||||||    
T  14188139 atccggcctaacaatttcgacattttgccagttgagctaggacttctg 14188092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 14243743 - 14243696
Alignment:
Q  14 gcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    ||||||||||||  | |||||  |||||||||||||||||||||||||    
T  14243743 gcctaacaatttcggcattttaccagttgagctaggacttctgaattt 14243696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 17649920 - 17649967
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||| |||||||||  |||||||| |||||||||||||| |||||    
T  17649920 atccggcttaacaatttcggtattttgccagttgagctaggatttctg 17649967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 18040185 - 18040138
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||  ||||||||||||||||||||    
T  18040185 atccggcctaacaatttcagcattttatcagttgagctaggacttctg 18040138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 20150270 - 20150223
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||||||||||   |||||| |||||||||||||| |||||    
T  20150270 atccggcctaacaattttgacattttgccagttgagctaggaattctg 20150223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 25199095 - 25199048
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||  ||||||||||||||||||||    
T  25199095 atccggcctaacaatttcggcattttaccagttgagctaggacttctg 25199048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 25213678 - 25213631
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||| ||||||||||  | |||||| ||||||||||||||||||||    
T  25213678 atccggtctaacaatttcggcattttgccagttgagctaggacttctg 25213631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 26738020 - 26737973
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||  ||||||||||||||||||||    
T  26738020 atccggcctaacaatttcggcattttaccagttgagctaggacttctg 26737973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 27928207 - 27928160
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||| ||||||||||  | |||||| ||||||||||||||||||||    
T  27928207 atccggtctaacaatttcggcattttgccagttgagctaggacttctg 27928160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 36586531 - 36586484
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||| |||||||||||  | |||||| ||||||||||||||||||||    
T  36586531 atccgacctaacaatttcggcattttgccagttgagctaggacttctg 36586484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 38953559 - 38953606
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||| ||||||||    
T  38953559 atccggcctaacaatttcggcattttgccagttgagctaagacttctg 38953606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 40744325 - 40744368
Alignment:
Q  13 ggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||||||   |||||| ||||||||||||||||||||    
T  40744325 ggcctaacaattttgacattttgccagttgagctaggacttctg 40744368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 43820917 - 43820870
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| |||||||| |||||||||||    
T  43820917 atccggcctaacaatttcggcattttgccagttgagttaggacttctg 43820870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000005; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 23310449 - 23310402
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  23310449 atccggcctaacaattttggtattttgccagttgagctaggacttctg 23310402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 9054050 - 9054097
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  |||||||| ||||||||||||||||||||    
T  9054050 atccggcctaacaatttcggtattttgccagttgagctaggacttctg 9054097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 29119655 - 29119605
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  29119655 atccggcctaacaatttcggcattttgccagttgagctaggacttctgaat 29119605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 1244260 - 1244312
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||| ||||    
T  1244260 atccggcctaacaatttcggcattttgccagttgagctaggacttctggattt 1244312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 17869203 - 17869255
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||| ||||    
T  17869203 atccggcctaacaatttcggcattttgccagttgagctaggacttctggattt 17869255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 36319581 - 36319625
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  36319581 atccggcctaacaatttcagtattttgccagttgagctaggactt 36319625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 2103075 - 2103028
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  2103075 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 2103028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 4165008 - 4164961
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  4165008 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 4164961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 6029661 - 6029614
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||||||||||   |||||| ||||||||||||||||||||    
T  6029661 atccggcctaacaattttgacattttgccagttgagctaggacttctg 6029614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 6672290 - 6672243
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  6672290 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 6672243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 9902580 - 9902627
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  9902580 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 9902627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 12878197 - 12878244
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  12878197 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 12878244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 18473963 - 18473916
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  18473963 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 18473916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 22620730 - 22620777
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  22620730 atccggcctaacaatttcggcattttgtcagttgagctaggacttctg 22620777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 23311252 - 23311299
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  23311252 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 23311299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 24443946 - 24443993
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||| |||||||||||  |||||||| ||||||||||||||||||||    
T  24443946 atccgacctaacaatttcggtattttgccagttgagctaggacttctg 24443993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 28143311 - 28143358
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  28143311 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 28143358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 36569328 - 36569281
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  36569328 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 36569281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 36727038 - 36726991
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  36727038 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 36726991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 38682977 - 38682930
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||| ||||||||||||| | |||||| ||||||||||||||||||||    
T  38682977 atccagcctaacaattttggcattttgccagttgagctaggacttctg 38682930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 41562507 - 41562460
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  41562507 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 41562460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 25328383 - 25328429
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttct 55  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||    
T  25328383 atccggcctaacaatttcggcattttgccagttgagctaggacttct 25328429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 33028279 - 33028233
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttct 55  Q
    |||||||||||||||||| | |||||| ||||||| |||||||||||    
T  33028279 atccggcctaacaattttggcattttgtcagttgaactaggacttct 33028233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 1269598 - 1269645
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||    |||||| ||||||||||||||||||||    
T  1269598 atccggcctaacaatttcgacattttgtcagttgagctaggacttctg 1269645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 11968825 - 11968778
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||    ||||||||||||||| |||||||||||    
T  11968825 atccggcctaacaatttcgacattttgacagttgagttaggacttctg 11968778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 12707955 - 12708002
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||| |||||||||||  | |||||| ||||||||||||||||||||    
T  12707955 atccgacctaacaatttcggcattttgccagttgagctaggacttctg 12708002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 14808884 - 14808837
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||| | |||||| |||||||  |||||||||||    
T  14808884 atccggcctaacaattttggcattttgccagttgaattaggacttctg 14808837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 24051452 - 24051405
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||| |||||| | |||||| |||||||| |||||||||||    
T  24051452 atccggcctaataattttagcattttgccagttgagttaggacttctg 24051405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 29806616 - 29806569
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||| | |||||  |||||||||||||| |||||    
T  29806616 atccggcctaacaattttggcattttaccagttgagctaggatttctg 29806569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 37191293 - 37191250
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggact 52  Q
    |||| ||||||||||||| | |||||| ||||||||||||||||    
T  37191293 atccagcctaacaattttggcattttgccagttgagctaggact 37191250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 42448260 - 42448213
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||    |||||| ||||||||||||||||||||    
T  42448260 atccggcctaacaatttcgacattttgccagttgagctaggacttctg 42448213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000003; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 24119705 - 24119653
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||||||||    
T  24119705 atccggcctaacaatttcggcattttgccagttgagctaggacttctgaattt 24119653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 15104093 - 15104047
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttct 55  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||    
T  15104093 atccggcctaacaattttggcattttgtcagttgagctaggacttct 15104047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 39522837 - 39522889
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    ||||||||||||||||| || |||||| |||||||| ||||||||||| ||||    
T  39522837 atccggcctaacaatttctgcattttgccagttgagttaggacttctgcattt 39522889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 43676103 - 43676155
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||| ||||    
T  43676103 atccggcctaacaatttcggcattttgccagttgagctaggacttctggattt 43676155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 4126624 - 4126577
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  4126624 atccggcctaacaatttccgcattttgtcagttgagctaggacttctg 4126577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 10635538 - 10635491
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  10635538 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 10635491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 18475158 - 18475111
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||||||| |  |||||||| ||||||||||||||||||||    
T  18475158 atccggcctaacaatgtcggtattttgccagttgagctaggacttctg 18475111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 19338257 - 19338304
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  19338257 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 19338304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 28999423 - 28999376
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  28999423 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 28999376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 29005139 - 29005092
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  29005139 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 29005092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 40809292 - 40809339
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  40809292 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 40809339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 40958653 - 40958700
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  40958653 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 40958700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 42631064 - 42631111
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  42631064 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 42631111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 48314216 - 48314169
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  48314216 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 48314169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 48392005 - 48391958
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  48392005 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 48391958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 40962781 - 40962831
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    |||| |||||| |||||| | |||||| |||||||||||||||||||||||    
T  40962781 atccagcctaataattttggcattttgtcagttgagctaggacttctgaat 40962831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 41445109 - 41445159
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    ||||||||||||||| |  | |||||| |||||||||||||||||||||||    
T  41445109 atccggcctaacaatgtcggcattttgccagttgagctaggacttctgaat 41445159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 8194045 - 8194093
Alignment:
Q  13 ggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    |||||||||||||  |||||||  ||||| |||||||||||||||||||    
T  8194045 ggcctaacaatttcggtattttatcagttaagctaggacttctgaattt 8194093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 29510737 - 29510777
Alignment:
Q  16 ctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||| | ||||||||||||||| |||||||||||    
T  29510737 ctaacaattttggcattttgacagttgagttaggacttctg 29510777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 43086550 - 43086594
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    |||||||||||||||||  | |||||| |||||||||||||||||    
T  43086550 atccggcctaacaatttcggcattttgccagttgagctaggactt 43086594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 49500910 - 49500866
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    |||||||||||||||||  | |||||| |||||||||||||||||    
T  49500910 atccggcctaacaatttcggcattttgccagttgagctaggactt 49500866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 3315843 - 3315796
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||||||| |  | |||||| ||||||||||||||||||||    
T  3315843 atccggcctaacaatgtcggcattttgccagttgagctaggacttctg 3315796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 17068201 - 17068154
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||  ||||||||||||||||||||    
T  17068201 atccggcctaacaatttcggcattttaccagttgagctaggacttctg 17068154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 22561246 - 22561293
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  |||||||| ||||| | ||||||||||||    
T  22561246 atccggcctaacaatttcggtattttgccagttaaactaggacttctg 22561293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 43025935 - 43025888
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||   ||||||| ||||||| ||||||||||||    
T  43025935 atccggcctaacaatttcgatattttgtcagttgaactaggacttctg 43025888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 49948290 - 49948243
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||    |||||| ||||||||||||||||||||    
T  49948290 atccggcctaacaatttcgacattttgccagttgagctaggacttctg 49948243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000001; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 6327260 - 6327213
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||||    
T  6327260 atccggcctaacaatttttgcattttgtcagttgagttaggacttctg 6327213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 6596591 - 6596544
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||||    
T  6596591 atccggcctaacaattttggcattttgccagttgagctaggacttctg 6596544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 7312532 - 7312579
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||||    
T  7312532 atccggcctaacaattttggcattttgccagttgagctaggacttctg 7312579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 2286172 - 2286216
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    |||||||||||||||||| | |||||| |||||||||||||||||    
T  2286172 atccggcctaacaattttggcattttgtcagttgagctaggactt 2286216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 2354876 - 2354923
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  2354876 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 2354923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 3497596 - 3497643
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  3497596 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 3497643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 4069195 - 4069242
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  |||||||| |||||||| |||||||||||    
T  4069195 atccggcctaacaatttcggtattttgccagttgagttaggacttctg 4069242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 4887592 - 4887639
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  4887592 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 4887639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 27396393 - 27396440
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  27396393 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 27396440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 29151632 - 29151585
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  29151632 atccggcctaacaatttcagcattttgccagttgagctaggacttctg 29151585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 35157163 - 35157210
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  35157163 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 35157210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 45236979 - 45236932
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  45236979 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 45236932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 48612566 - 48612519
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  48612566 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 48612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 48729763 - 48729810
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  48729763 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 48729810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 6384598 - 6384644
Alignment:
Q  10 tccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||||||||  |||||||  ||||||||||||||||||||    
T  6384598 tccggcctaacaatttcggtattttaccagttgagctaggacttctg 6384644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 38261050 - 38261000
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    |||||||||||||||||    |||||| |||||||||||||||||||||||    
T  38261050 atccggcctaacaatttcgacattttgtcagttgagctaggacttctgaat 38261000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 17895683 - 17895638
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttc 54  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||    
T  17895683 atccggcctaacaatttcagcattttgccagttgagctaggacttc 17895638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 10061095 - 10061139
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    |||||||||||||||||  | |||||| |||||||||||||||||    
T  10061095 atccggcctaacaatttcggcattttgccagttgagctaggactt 10061139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 33512846 - 33512802
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    |||||||||||||||||  | |||||| |||||||||||||||||    
T  33512846 atccggcctaacaatttcggcattttgccagttgagctaggactt 33512802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 45946759 - 45946715
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    ||||||||||| |||||| | |||||| |||||||||||||||||    
T  45946759 atccggcctaataattttggcattttgtcagttgagctaggactt 45946715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 47182852 - 47182808
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    |||||| ||||||||||| | |||||| |||||||||||||||||    
T  47182852 atccggtctaacaattttggcattttgccagttgagctaggactt 47182808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 1323732 - 1323685
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||| ||  | |||||| ||||||||||||||||||||    
T  1323732 atccggcctaacaaattcggcattttgccagttgagctaggacttctg 1323685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 1573920 - 1573967
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||  ||||||||||||||||||||    
T  1573920 atccggcctaacaatttcggcattttaccagttgagctaggacttctg 1573967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 4106603 - 4106556
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||  ||||||||||||||||||||    
T  4106603 atccggcctaacaatttcggcattttaccagttgagctaggacttctg 4106556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 9380040 - 9379993
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||    |||||| ||||||||||||||||||||    
T  9380040 atccggcctaacaatttcgacattttgccagttgagctaggacttctg 9379993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 18944973 - 18944926
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||| ||||||||||||    
T  18944973 atccggcctaacaatttcggcattttgccagttgaactaggacttctg 18944926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 19306761 - 19306714
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||| |||||  | |||||| ||||||||||||||||||||    
T  19306761 atccggcctaataatttcggcattttgccagttgagctaggacttctg 19306714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 31717346 - 31717299
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||  ||||||||||||||||||||    
T  31717346 atccggcctaacaatttcggcattttaccagttgagctaggacttctg 31717299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 35849344 - 35849297
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | | |||| ||||||||||||||||||||    
T  35849344 atccggcctaacaatttcggcactttgccagttgagctaggacttctg 35849297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 40809094 - 40809047
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||| ||  | |||||| ||||||||||||||||||||    
T  40809094 atccggcctaacaaattcggcattttgccagttgagctaggacttctg 40809047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 44327689 - 44327642
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||||||||||   |||||| |||||||||||||| |||||    
T  44327689 atccggcctaacaattttgacattttgccagttgagctaggaattctg 44327642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000001; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 7512816 - 7512769
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||||    
T  7512816 atccggcctaacaattttggcattttgccagttgagctaggacttctg 7512769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 14285144 - 14285097
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||||    
T  14285144 atccggcctaacaattttggcattttgtcagttgagctaggacttctg 14285097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 29428104 - 29428057
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  |||||||| ||||||||||||||||||||    
T  29428104 atccggcctaacaatttcggtattttgccagttgagctaggacttctg 29428057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 35828323 - 35828273
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  35828323 atccggcctaacaatttcggcattttgccagttgagctaggacttctgaat 35828273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 52556462 - 52556512
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    |||||||||||||||||| | |||||| |||||||||||||| ||||||||    
T  52556462 atccggcctaacaattttggcattttgccagttgagctaggatttctgaat 52556512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 23974721 - 23974773
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||| ||||    
T  23974721 atccggcctaacaatttcggcattttgccagttgagctaggacttctggattt 23974773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 33416659 - 33416707
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctga 57  Q
    |||||| ||||||||||  |||||||| |||||||||||||||||||||    
T  33416659 atccggtctaacaatttcggtattttgccagttgagctaggacttctga 33416707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 42154217 - 42154269
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||| ||||    
T  42154217 atccggcctaacaatttcggcattttgccagttgagctaggacttctggattt 42154269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 5397019 - 5397066
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  5397019 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 5397066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 9569524 - 9569477
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  9569524 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 9569477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 12821214 - 12821167
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  12821214 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 12821167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 28010130 - 28010177
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||| ||||||||||||| | |||||| ||||||||||||||||||||    
T  28010130 atcctgcctaacaattttggcattttgccagttgagctaggacttctg 28010177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 30044663 - 30044710
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  30044663 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 30044710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 42856612 - 42856565
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  42856612 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 42856565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 46488196 - 46488243
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  46488196 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 46488243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 49535934 - 49535887
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  49535934 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 49535887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 49882788 - 49882835
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  49882788 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 49882835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 1033528 - 1033574
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttct 55  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||    
T  1033528 atccggcctaacaatttcggcattttgccagttgagctaggacttct 1033574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 24712137 - 24712083
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaatttca 63  Q
    ||||| |||||||||||  | |||||| |||||||||||||||||||| ||||||    
T  24712137 atccgacctaacaatttcggcattttgccagttgagctaggacttctggatttca 24712083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 37050750 - 37050700
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    |||||||||||||||||  | |||||| ||||||||||| |||||||||||    
T  37050750 atccggcctaacaatttcggcattttgccagttgagctaagacttctgaat 37050700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 47462115 - 47462161
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttct 55  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||    
T  47462115 atccggcctaacaatttcggcattttgccagttgagctaggacttct 47462161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 54907971 - 54908017
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttct 55  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||    
T  54907971 atccggcctaacaatttcggcattttgccagttgagctaggacttct 54908017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 37166187 - 37166142
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttc 54  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||    
T  37166187 atccggcctaacaatttcggcattttgccagttgagctaggacttc 37166142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 1982607 - 1982563
Alignment:
Q  12 cggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||||||  | |||||| ||||||||||||||||||||    
T  1982607 cggcctaacaatttcggcattttgccagttgagctaggacttctg 1982563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 11673342 - 11673298
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    |||| ||||||||||||  |||||||| |||||||||||||||||    
T  11673342 atcctgcctaacaatttcggtattttgccagttgagctaggactt 11673298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 3084321 - 3084368
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||| |||||||||||  | |||||| ||||||||||||||||||||    
T  3084321 atccgacctaacaatttcggcattttgccagttgagctaggacttctg 3084368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 3848897 - 3848944
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||| ||||||  | |||||| ||||||||||||||||||||    
T  3848897 atccggcctagcaatttcggcattttgccagttgagctaggacttctg 3848944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 4379356 - 4379309
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||| ||||||||||||    
T  4379356 atccggcctaacaatttcggcattttgtcagttgaactaggacttctg 4379309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 4901971 - 4901920
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaatt 60  Q
    ||||||||||||||||||   |||||  |||| |||||||||||||||||||    
T  4901971 atccggcctaacaattttgacattttatcagtcgagctaggacttctgaatt 4901920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 12694572 - 12694525
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||||| |||  | |||||| ||||||||||||||||||||    
T  12694572 atccggcctaacagtttcagcattttgtcagttgagctaggacttctg 12694525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 13389069 - 13389022
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||| |||||||||||  | |||||| ||||||||||||||||||||    
T  13389069 atccgacctaacaatttcagcattttgccagttgagctaggacttctg 13389022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 24550862 - 24550815
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||| ||||||||    
T  24550862 atccggcctaacaatttcggcattttgccagttgagctaagacttctg 24550815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 35318589 - 35318542
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| |||||||| |||||||||||    
T  35318589 atccggcctaacaatttcggcattttgccagttgagttaggacttctg 35318542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 51425379 - 51425328
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaatt 60  Q
    |||||||||||||||||  | ||||||  |||||| ||||||||||||||||    
T  51425379 atccggcctaacaatttcggcattttgctagttgaactaggacttctgaatt 51425328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000001; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 4976787 - 4976834
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||||    
T  4976787 atccggcctaacaattttggcattttgccagttgagctaggacttctg 4976834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 3917815 - 3917763
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||| ||||    
T  3917815 atccggcctaacaatttcggcattttgccagttgagctaggacttctggattt 3917763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 46894862 - 46894810
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    |||||||||||||||||   ||||||| |||||||||||||||||||| ||||    
T  46894862 atccggcctaacaatttcgatattttgtcagttgagctaggacttctggattt 46894810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 2687608 - 2687561
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  2687608 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 2687561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 4232256 - 4232303
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  4232256 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 4232303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 4833188 - 4833235
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  4833188 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 4833235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 6583314 - 6583361
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  6583314 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 6583361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 8381128 - 8381081
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  8381128 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 8381081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 13525218 - 13525171
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  13525218 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 13525171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 27396903 - 27396856
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  27396903 atccggcctaacaatttcggcattttgtcagttgagctaggacttctg 27396856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 42296760 - 42296714
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||||    
T  42296760 atccggcctaacaattttggcattttg-cagttgagctaggacttctg 42296714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 11312639 - 11312593
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttct 55  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||    
T  11312639 atccggcctaacaatttcggcattttgccagttgagctaggacttct 11312593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 37312576 - 37312530
Alignment:
Q  10 tccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||||||||  |||||||  ||||||||||||||||||||    
T  37312576 tccggcctaacaatttcggtattttaccagttgagctaggacttctg 37312530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 48191143 - 48191093
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    |||||||||||||||||  | |||||  |||||||||||||||||||||||    
T  48191143 atccggcctaacaatttcggcattttagcagttgagctaggacttctgaat 48191093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 12948859 - 12948806
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaatttc 62  Q
    |||||||||||||||||    |||||  ||||||||||||||||||||||||||    
T  12948859 atccggcctaacaatttcgtcattttaccagttgagctaggacttctgaatttc 12948806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 50238919 - 50238976
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaatttcattt 66  Q
    |||||||||||||||||    |||||  |||||||||||||||||||||||| |||||    
T  50238919 atccggcctaacaatttcgacattttaccagttgagctaggacttctgaattgcattt 50238976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 10473993 - 10474037
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    |||||||||||||||||  | |||||| |||||||||||||||||    
T  10473993 atccggcctaacaatttcagcattttgccagttgagctaggactt 10474037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 24751802 - 24751758
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    |||||||||||||||||  | |||||| |||||||||||||||||    
T  24751802 atccggcctaacaatttcggcattttgccagttgagctaggactt 24751758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 29212144 - 29212188
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    |||||||||||||||||  | |||||| |||||||||||||||||    
T  29212144 atccggcctaacaatttcggcattttgccagttgagctaggactt 29212188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 44037523 - 44037575
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    ||||| |||||||||||  | |||||| |||||||||||||||||||| ||||    
T  44037523 atccgacctaacaatttcggcattttgccagttgagctaggacttctggattt 44037575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 53584011 - 53583963
Alignment:
Q  8 aatccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||||||||||    |||||| ||||||||||||||||||||    
T  53584011 aatccggcctaacaatttcgacattttgccagttgagctaggacttctg 53583963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 6083220 - 6083267
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | ||||||  |||||||||||||||||||    
T  6083220 atccggcctaacaatttcggcattttgctagttgagctaggacttctg 6083267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 15003677 - 15003630
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||| |||||||||||| | |||||| ||||||| ||||||||||||    
T  15003677 atccgacctaacaattttggcattttgccagttgaactaggacttctg 15003630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 22371499 - 22371452
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| |||||||| |||||||||||    
T  22371499 atccggcctaacaatttcggcattttgccagttgaggtaggacttctg 22371452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 24250774 - 24250727
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| || |||||||||||||||||    
T  24250774 atccggcctaacaatttcggcattttgccaattgagctaggacttctg 24250727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 24650626 - 24650673
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| |||||||| |||||||||||    
T  24650626 atccggcctaacaatttcggcattttgccagttgaggtaggacttctg 24650673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 24910367 - 24910414
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||| ||||||||||||  | |||||| ||||||||||||||||||||    
T  24910367 atccagcctaacaatttcggcattttgccagttgagctaggacttctg 24910414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 28266575 - 28266528
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||| ||||||||||||  | |||||| ||||||||||||||||||||    
T  28266575 atccagcctaacaatttcggcattttgtcagttgagctaggacttctg 28266528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 30553047 - 30553094
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||| ||||||||||  | |||||| ||||||||||||||||||||    
T  30553047 atccggtctaacaatttcggcattttgccagttgagctaggacttctg 30553094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 32961061 - 32961104
Alignment:
Q  13 ggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||  | |||||| ||||||||||||||||||||    
T  32961061 ggcctaacaatttcggcattttgccagttgagctaggacttctg 32961104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 34397729 - 34397682
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||| ||||||||||||    
T  34397729 atccggcctaacaatttcggcattttgccagttgaactaggacttctg 34397682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 38127921 - 38127968
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||    |||||| ||||||||||||||||||||    
T  38127921 atccggcctaacaatttcgacattttgccagttgagctaggacttctg 38127968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 41464713 - 41464666
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||| |||||||||||  | |||||| ||||||||||||||||||||    
T  41464713 atccgacctaacaatttcggcattttgccagttgagctaggacttctg 41464666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 43605655 - 43605702
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||| ||  | |||||| ||||||||||||||||||||    
T  43605655 atccggcctaacaaattcagcattttgccagttgagctaggacttctg 43605702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 43898042 - 43898089
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| | ||||||||||||||||||    
T  43898042 atccggcctaacaatttcggcattttgtctgttgagctaggacttctg 43898089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 46311522 - 46311573
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaatt 60  Q
    |||||||||||||||||    |||||  ||||||||||||||||||||||||    
T  46311522 atccggcctaacaatttcgacattttaccagttgagctaggacttctgaatt 46311573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 46838806 - 46838853
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||  ||||||||||||||||||||    
T  46838806 atccggcctaacaatttcggcatttttccagttgagctaggacttctg 46838853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 47408889 - 47408842
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | ||||||  |||||||||||||||||||    
T  47408889 atccggcctaacaatttcggcattttgctagttgagctaggacttctg 47408842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 54097519 - 54097566
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| || |||||||||||||||||    
T  54097519 atccggcctaacaatttcggcattttgccatttgagctaggacttctg 54097566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000001; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 16368767 - 16368818
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaatt 60  Q
    |||||||||||||||||  |||||||| ||| ||||||||||||||||||||    
T  16368767 atccggcctaacaatttcggtattttgccagatgagctaggacttctgaatt 16368818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 42200941 - 42200988
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||||    
T  42200941 atccggcctaacaattttggcattttgccagttgagctaggacttctg 42200988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 20251564 - 20251616
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||| ||||    
T  20251564 atccggcctaacaatttcggcattttgccagttgagctaggacttctggattt 20251616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 42160336 - 42160388
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||| ||||    
T  42160336 atccggcctaacaatttcggcattttgccagttgagctaggacttctggattt 42160388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 2287388 - 2287435
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  2287388 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 2287435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 7958063 - 7958110
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||| ||||||||  |||||||| ||||||||||||||||||||    
T  7958063 atccggcccaacaatttcggtattttgccagttgagctaggacttctg 7958110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 15897263 - 15897216
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  15897263 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 15897216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 23080177 - 23080224
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  23080177 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 23080224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 32023301 - 32023254
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  32023301 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 32023254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 34481750 - 34481801
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaatt 60  Q
    |||| ||||||||||||  | |||||| ||||||||||||||||||||||||    
T  34481750 atccagcctaacaatttcggcattttgccagttgagctaggacttctgaatt 34481801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 34667093 - 34667046
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  34667093 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 34667046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 36754820 - 36754867
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  36754820 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 36754867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 38490479 - 38490526
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  38490479 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 38490526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 43035489 - 43035442
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  |||||||| || |||||||||||||||||    
T  43035489 atccggcctaacaatttcggtattttgccaattgagctaggacttctg 43035442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 39310415 - 39310365
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    |||||||||||||||||   |||||||  ||||||||||||||||||||||    
T  39310415 atccggcctaacaatttcgatattttgctagttgagctaggacttctgaat 39310365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 12236170 - 12236117
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaatttc 62  Q
    |||||||||||||||||  | |||||  |||||||||||||||||||| |||||    
T  12236170 atccggcctaacaatttcggcattttaccagttgagctaggacttctggatttc 12236117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 25510382 - 25510427
Alignment:
Q  10 tccggcctaacaatttttgtattttgacagttgagctaggacttct 55  Q
    ||||||||||||||||  |||||||  |||||||||||||||||||    
T  25510382 tccggcctaacaatttcggtattttaccagttgagctaggacttct 25510427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 28855493 - 28855538
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttc 54  Q
    ||||| |||||||||||| | |||||| ||||||||||||||||||    
T  28855493 atccgccctaacaattttggcattttgccagttgagctaggacttc 28855538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 4014892 - 4014936
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    |||||||||||||||||  | |||||| |||||||||||||||||    
T  4014892 atccggcctaacaatttcggcattttgtcagttgagctaggactt 4014936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 7975093 - 7975137
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    |||||||||||||||||  | |||||| |||||||||||||||||    
T  7975093 atccggcctaacaatttcggcattttgccagttgagctaggactt 7975137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 727368 - 727415
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||| |||||||||||  | |||||| ||||||||||||||||||||    
T  727368 atccgacctaacaatttcggcattttgtcagttgagctaggacttctg 727415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 6731591 - 6731544
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | ||||||  |||||||||||||||||||    
T  6731591 atccggcctaacaatttcggcattttgctagttgagctaggacttctg 6731544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 13268054 - 13268101
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||| |||||||||||  | |||||| ||||||||||||||||||||    
T  13268054 atccgacctaacaatttcggcattttgccagttgagctaggacttctg 13268101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 33607088 - 33607045
Alignment:
Q  13 ggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||  | |||||| ||||||||||||||||||||    
T  33607088 ggcctaacaatttcggcattttgccagttgagctaggacttctg 33607045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 35476569 - 35476616
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||    |||||| ||||||||||||||||||||    
T  35476569 atccggcctaacaatttcgacattttgccagttgagctaggacttctg 35476616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 35687865 - 35687912
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||  ||||||||||||||||||||    
T  35687865 atccggcctaacaatttcggcattttatcagttgagctaggacttctg 35687912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 39070068 - 39070021
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||  ||||||||||||||||||||    
T  39070068 atccggcctaacaatttcggcattttaccagttgagctaggacttctg 39070021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 40592362 - 40592315
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||| |||||||||||  | |||||| ||||||||||||||||||||    
T  40592362 atccgacctaacaatttcggcattttgccagttgagctaggacttctg 40592315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 44948068 - 44948021
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||    |||||| ||||||||||||||||||||    
T  44948068 atccggcctaacaatttcgacattttgtcagttgagctaggacttctg 44948021  T

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Target: chr6 (Bit Score: 35; Significance: 0.00000000004; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 1241644 - 1241594
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  1241644 atccggcctaacaatttcggcattttgccagttgagctaggacttctgaat 1241594  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 18861846 - 18861896
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  18861846 atccggcctaacaatttcggcattttgccagttgagctaggacttctgaat 18861896  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 21513121 - 21513060
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaatttcatttagtt 70  Q
    |||||||||||||||||    |||||| |||||||||||||||||||||||||  |||||||    
T  21513121 atccggcctaacaatttcgacattttgccagttgagctaggacttctgaatttgttttagtt 21513060  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 2314678 - 2314725
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  2314678 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 2314725  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 4996921 - 4996874
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  4996921 atccggcctaacaatttcagcattttgtcagttgagctaggacttctg 4996874  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 8448221 - 8448268
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  8448221 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 8448268  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 8457025 - 8457072
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  8457025 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 8457072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 17534602 - 17534649
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  17534602 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 17534649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 31205262 - 31205309
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  31205262 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 31205309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 4128993 - 4128947
Alignment:
Q  10 tccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||||||||||||  |||||||  ||||||||||||||||||||    
T  4128993 tccggcctaacaatttcggtattttaccagttgagctaggacttctg 4128947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 32107914 - 32107964
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaat 59  Q
    |||| ||||||||||||  | |||||| |||||||||||||||||||||||    
T  32107914 atccagcctaacaatttcggcattttgccagttgagctaggacttctgaat 32107964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 12795098 - 12795150
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaattt 61  Q
    |||||||||||||||||  | |||||   ||||||||||||||||||||||||    
T  12795098 atccggcctaacaatttcggcattttactagttgagctaggacttctgaattt 12795150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 14982733 - 14982777
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  14982733 atccggcctaacaatttcggtattttggcagttaagctaggactt 14982777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 735494 - 735447
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| |||||||||||| |||||||    
T  735494 atccggcctaacaatttcggcattttgccagttgagctagaacttctg 735447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 2236283 - 2236232
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctgaatt 60  Q
    ||||||||||| |||||  | |||||| |||||||||||||| |||||||||    
T  2236283 atccggcctaataatttcggcattttgtcagttgagctaggaattctgaatt 2236232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 4083636 - 4083589
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||| |||||||||||  | |||||| ||||||||||||||||||||    
T  4083636 atccgacctaacaatttcggcattttgccagttgagctaggacttctg 4083589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 4480523 - 4480476
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| |||||||| |||||||||||    
T  4480523 atccggcctaacaatttcggcattttgccagttgagttaggacttctg 4480476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 8939675 - 8939628
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||| |||||||||||  | |||||| ||||||||||||||||||||    
T  8939675 atccgacctaacaatttcggcattttgccagttgagctaggacttctg 8939628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 10181094 - 10181047
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||| |||||||||||  | |||||| ||||||||||||||||||||    
T  10181094 atccgacctaacaatttcggcattttgccagttgagctaggacttctg 10181047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 10263150 - 10263197
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | | |||| ||||||||||||||||||||    
T  10263150 atccggcctaacaatttcggcactttgccagttgagctaggacttctg 10263197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 10531435 - 10531388
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||   ||||||| |||||||||||| |||||||    
T  10531435 atccggcctaacaatttcgatattttgtcagttgagctagaacttctg 10531388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 13540240 - 13540287
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| || |||||||||||||||||    
T  13540240 atccggcctaacaatttcggcattttgccatttgagctaggacttctg 13540287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 27866637 - 27866590
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||| | |||||| || ||||||| |||||||||    
T  27866637 atccggcctaacaattttggcattttgccaattgagctgggacttctg 27866590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 9416 - 9369
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  9416 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 9369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 1320 - 1367
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  1320 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 1367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 1137 - 1184
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||||    
T  1137 atccggcctaacaatttcggcattttgccagttgagctaggacttctg 1184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 6828 - 6782
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttct 55  Q
    |||||||||||||||||  | |||||| |||||||||||||||||||    
T  6828 atccggcctaacaatttcggcattttgccagttgagctaggacttct 6782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 26996 - 27040
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggactt 53  Q
    ||||||||||||||||| || |||||| |||||||||||| ||||    
T  26996 atccggcctaacaatttctgcattttgccagttgagctagaactt 27040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 4094 - 4141
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    ||||||| |||||||||  | |||||| ||||||||||||||||||||    
T  4094 atccggcttaacaatttcggcattttgccagttgagctaggacttctg 4141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 8938 - 8985
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||| ||||||||||| ||||||||    
T  8938 atccggcctaacaatttcggcattttgccagttgagctatgacttctg 8985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 90614 - 90571
Alignment:
Q  13 ggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||  | |||||| ||||||||||||||||||||    
T  90614 ggcctaacaatttcggcattttgccagttgagctaggacttctg 90571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 39392 - 39439
Alignment:
Q  9 atccggcctaacaatttttgtattttgacagttgagctaggacttctg 56  Q
    |||||||||||||||||  | |||||  ||||||||||||||||||||    
T  39392 atccggcctaacaatttcggcattttaccagttgagctaggacttctg 39439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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