View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2931_low_17 (Length: 237)
Name: NF2931_low_17
Description: NF2931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2931_low_17 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 12097982 - 12098203
Alignment:
| Q |
1 |
cttttacttatttaagcctattattaactgagtaaattacgaaattgtctatcattttattgctttaaatttacaaatatgcaaaagcatctttgaattc |
100 |
Q |
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| T |
12097982 |
cttttacttatttaagcctattattcactgagtaaattacgaaattgtctatcattttattgctttaaatttacaaatatgcaaaagcatctttaaattc |
12098081 |
T |
|
| Q |
101 |
gtaagacgtcaatcaatttcatcatttttctctcaaattaggatttttagattcattatcattatggatttggtttatatgaatggggtagaggattagt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
12098082 |
gtaagacgtcaatcaatttcatcatttttctctcaaattaggatttttagattcattatcattatggatttggtttatatgaatgaggtagaggattagt |
12098181 |
T |
|
| Q |
201 |
aattaggttgggatgaggaaat |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
12098182 |
aattaggttgggatgaggaaat |
12098203 |
T |
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