View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2932_high_24 (Length: 383)

Name: NF2932_high_24
Description: NF2932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2932_high_24
NF2932_high_24
[»] chr4 (16 HSPs)
chr4 (104-240)||(39137456-39137592)
chr4 (303-366)||(39137652-39137715)
chr4 (136-217)||(3155554-3155635)
chr4 (19-60)||(39137371-39137412)
chr4 (152-211)||(52326153-52326212)
chr4 (151-217)||(27043868-27043934)
chr4 (241-278)||(39137614-39137651)
chr4 (155-211)||(56480318-56480374)
chr4 (152-199)||(52746896-52746943)
chr4 (155-189)||(28300365-28300399)
chr4 (156-190)||(53294179-53294213)
chr4 (136-181)||(7601710-7601755)
chr4 (138-199)||(25885812-25885873)
chr4 (128-189)||(47946141-47946202)
chr4 (133-185)||(47800578-47800630)
chr4 (152-216)||(51630078-51630142)
[»] chr1 (18 HSPs)
chr1 (130-217)||(24915089-24915176)
chr1 (136-199)||(9572164-9572227)
chr1 (129-185)||(7028236-7028292)
chr1 (158-217)||(2294884-2294943)
chr1 (241-280)||(38115998-38116037)
chr1 (152-191)||(51190828-51190867)
chr1 (152-190)||(836404-836442)
chr1 (130-188)||(13809943-13810001)
chr1 (151-189)||(14576719-14576757)
chr1 (152-190)||(15477545-15477583)
chr1 (130-216)||(37769699-37769785)
chr1 (158-216)||(46225762-46225820)
chr1 (249-286)||(6292610-6292647)
chr1 (152-217)||(34290203-34290268)
chr1 (251-287)||(6659800-6659836)
chr1 (250-282)||(32958756-32958788)
chr1 (152-188)||(34619445-34619481)
chr1 (152-188)||(37841965-37842001)
[»] chr3 (8 HSPs)
chr3 (136-217)||(30956664-30956745)
chr3 (136-217)||(30972476-30972557)
chr3 (129-199)||(32095247-32095317)
chr3 (131-199)||(25447300-25447368)
chr3 (136-199)||(44061079-44061142)
chr3 (152-190)||(24684888-24684926)
chr3 (136-217)||(33405205-33405286)
chr3 (251-283)||(8007584-8007616)
[»] chr7 (13 HSPs)
chr7 (136-199)||(34083581-34083644)
chr7 (135-197)||(30180001-30180063)
chr7 (152-217)||(12110327-12110392)
chr7 (135-204)||(22283795-22283863)
chr7 (154-210)||(39907772-39907828)
chr7 (158-197)||(43694628-43694667)
chr7 (158-197)||(46280330-46280369)
chr7 (241-287)||(11782957-11783003)
chr7 (153-190)||(13960884-13960921)
chr7 (155-216)||(47177606-47177667)
chr7 (129-173)||(3968277-3968321)
chr7 (155-191)||(17248525-17248561)
chr7 (154-197)||(34672834-34672878)
[»] chr6 (7 HSPs)
chr6 (152-210)||(9093601-9093659)
chr6 (129-187)||(507164-507222)
chr6 (129-201)||(9559595-9559667)
chr6 (152-199)||(2735036-2735083)
chr6 (152-186)||(28621179-28621213)
chr6 (152-197)||(3785758-3785803)
chr6 (155-199)||(6909928-6909972)
[»] chr5 (11 HSPs)
chr5 (152-217)||(12425538-12425603)
chr5 (152-187)||(41819579-41819614)
chr5 (136-190)||(1465084-1465138)
chr5 (152-211)||(18857444-18857503)
chr5 (152-199)||(32372591-32372638)
chr5 (152-185)||(465921-465954)
chr5 (152-189)||(35446022-35446059)
chr5 (152-205)||(41981915-41981968)
chr5 (151-204)||(42646881-42646934)
chr5 (218-282)||(3280655-3280719)
chr5 (152-188)||(42582760-42582796)
[»] chr2 (9 HSPs)
chr2 (152-190)||(43199858-43199896)
chr2 (152-217)||(12464511-12464576)
chr2 (152-190)||(36114588-36114626)
chr2 (156-217)||(18066099-18066160)
chr2 (164-217)||(26626852-26626905)
chr2 (129-197)||(2416257-2416325)
chr2 (129-181)||(3611170-3611222)
chr2 (152-216)||(41851502-41851566)
chr2 (153-189)||(44439426-44439462)
[»] chr8 (6 HSPs)
chr8 (152-199)||(2482832-2482879)
chr8 (131-190)||(10758321-10758380)
chr8 (136-191)||(26771216-26771271)
chr8 (136-190)||(16733980-16734034)
chr8 (234-274)||(4390316-4390356)
chr8 (153-189)||(38036178-38036214)


Alignment Details
Target: chr4 (Bit Score: 121; Significance: 7e-62; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 104 - 240
Target Start/End: Original strand, 39137456 - 39137592
Alignment:
Q  104 ctatctgcattcaatcttcagtgattataaattatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaa 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  39137456 ctatctgcattcaatcttcagtgattataaattatttctatagcataggataaaataaattttaattatttttgtataagctataagccgttttcaaaaa 39137555  T
Q  204 ctgtcttgcagaacatgttataaactgttttcataag 240  Q
    |||||||||||||||||||||||| ||||||||||||    
T  39137556 ctgtcttgcagaacatgttataaattgttttcataag 39137592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 39137652 - 39137715
Alignment:
Q  303 ttcaaaatgccatgattgatagtattaagatatctaattgtatctggtattaatgtaaaagatt 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39137652 ttcaaaatgccatgattgatagtattaagatatctaattgtatctggtattaatgtaaaagatt 39137715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 3155554 - 3155635
Alignment:
Q  136 tatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaac 217  Q
    |||||||||||||   ||||||||||| |||||||||||||||| |||||| |||| ||||||| ||||| ||||| |||||    
T  3155554 tatttctatagcaaaagataaaataaagttaaattgtttttgtacaagctacaagctgttttcataaactatcttgaagaac 3155635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 39137371 - 39137412
Alignment:
Q  19 cacagaagaagccacaaaacccacaagtatgtactcttcacc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39137371 cacagaagaagccacaaaacccacaagtatgtactcttcacc 39137412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 52326212 - 52326153
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttg 211  Q
    ||||||||||| |||||||||| |||||||||||| ||||| |||||| ||||| |||||    
T  52326212 gataaaataaagttaaattgttgttgtataagctagaagcctttttcataaactatcttg 52326153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 27043934 - 27043868
Alignment:
Q  151 ggataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaac 217  Q
    |||||||||||| |||||||||||| ||||||||||||||  ||||| | ||||| ||||| |||||    
T  27043934 ggataaaataaagttaaattgttttcgtataagctataagatgtttttataaactatcttggagaac 27043868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 39137614 - 39137651
Alignment:
Q  241 aacttacttcagtagataagctaaaataagtcaatcta 278  Q
    |||||||||||||| |||||||||||||||||||||||    
T  39137614 aacttacttcagtatataagctaaaataagtcaatcta 39137651  T

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Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 56480318 - 56480374
Alignment:
Q  155 aaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttg 211  Q
    |||||||| ||||||||||| |||||||| ||||||| ||||||| ||||| |||||    
T  56480318 aaaataaagttaaattgtttatgtataagttataagctgttttcataaactatcttg 56480374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 52746943 - 52746896
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagccgttttca 199  Q
    ||||||||||| ||||||||||||||| ||||| |||||| |||||||    
T  52746943 gataaaataaagttaaattgtttttgtgtaagccataagctgttttca 52746896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 189
Target Start/End: Complemental strand, 28300399 - 28300365
Alignment:
Q  155 aaaataaatttaaattgtttttgtataagctataa 189  Q
    |||||||| ||||||||||||||||||||||||||    
T  28300399 aaaataaagttaaattgtttttgtataagctataa 28300365  T

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Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 190
Target Start/End: Complemental strand, 53294213 - 53294179
Alignment:
Q  156 aaataaatttaaattgtttttgtataagctataag 190  Q
    |||||||||||||||||||||||||| ||||||||    
T  53294213 aaataaatttaaattgtttttgtatatgctataag 53294179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 7601710 - 7601755
Alignment:
Q  136 tatttctatagcatgggataaaataaatttaaattgtttttgtata 181  Q
    |||| ||||||||  |||||||||||| ||||||||||||||||||    
T  7601710 tattcctatagcaaaggataaaataaagttaaattgtttttgtata 7601755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 25885812 - 25885873
Alignment:
Q  138 tttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgttttca 199  Q
    |||||||||||   ||||||||||| |||||||||||| || |||||||||||  |||||||    
T  25885812 tttctatagcaaaagataaaataaagttaaattgttttcgtgtaagctataagttgttttca 25885873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 47946141 - 47946202
Alignment:
Q  128 ttataaattatttctatagcatgggataaaataaatttaaattgtttttgtataagctataa 189  Q
    |||||| ||||||||||| | |  |||||||| || |||||||||||| |||||||||||||    
T  47946141 ttataagttatttctataacgtaagataaaatgaagttaaattgttttcgtataagctataa 47946202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 47800578 - 47800630
Alignment:
Q  133 aattatttctatagcatgggataaaataaatttaaattgtttttgtataagct 185  Q
    ||||||||||||| ||   ||||||||||| ||||| ||||||||||||||||    
T  47800578 aattatttctataacaaaagataaaataaagttaaaatgtttttgtataagct 47800630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 51630078 - 51630142
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaa 216  Q
    ||||||||||| ||||||||||||  ||||||||||||||  |||||| || || ||||| ||||    
T  51630078 gataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaa 51630142  T

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Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 24915176 - 24915089
Alignment:
Q  130 ataaattatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaac 217  Q
    ||||| |||||||||||||   ||||||||||| |||||||||||||||||| ||||||||| ||||||| || |||||||| |||||    
T  24915176 ataaactatttctatagcagaagataaaataaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaac 24915089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 9572227 - 9572164
Alignment:
Q  136 tatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgttttca 199  Q
    |||||||||||||   ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  9572227 tatttctatagcaaaagataaaataaagttaaattgcttttgtataagctataagccgttttca 9572164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 7028236 - 7028292
Alignment:
Q  129 tataaattatttctatagcatgggataaaataaatttaaattgtttttgtataagct 185  Q
    |||||| |||||||||||||   ||||||||||| |||| |||||||||||||||||    
T  7028236 tataaactatttctatagcaaaagataaaataaagttaagttgtttttgtataagct 7028292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 2294884 - 2294943
Alignment:
Q  158 ataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaac 217  Q
    ||||| |||||||||||||| |||||||||||||  |||||| ||||| ||||| |||||    
T  2294884 ataaagttaaattgtttttggataagctataagctattttcataaactatcttggagaac 2294943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 280
Target Start/End: Complemental strand, 38116037 - 38115998
Alignment:
Q  241 aacttacttcagtagataagctaaaataagtcaatctaaa 280  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  38116037 aacttacgtcagtagataagctcaaataagtcaatctaaa 38115998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 191
Target Start/End: Original strand, 51190828 - 51190867
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagc 191  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  51190828 gataaaataaagttaaattgtttttgtataagttataagc 51190867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 836442 - 836404
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataag 190  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  836442 gataaaataaaactaaattgtttttgtataagctataag 836404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 13809943 - 13810001
Alignment:
Q  130 ataaattatttctatagcatgggataaaataaatttaaattgtttttgtataagctata 188  Q
    |||| |||||||| |||||   ||||||||||| |||||||||||||||||| ||||||    
T  13809943 ataagttatttctttagcaaaagataaaataaagttaaattgtttttgtatatgctata 13810001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 14576757 - 14576719
Alignment:
Q  151 ggataaaataaatttaaattgtttttgtataagctataa 189  Q
    |||||||||||| |||||||||||||||||| |||||||    
T  14576757 ggataaaataaagttaaattgtttttgtatatgctataa 14576719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 15477545 - 15477583
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataag 190  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  15477545 gataaaataaagttaaattgtttttgtatatgctataag 15477583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 37769785 - 37769699
Alignment:
Q  130 ataaattatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaa 216  Q
    ||||||||||| |||||||   ||||||||||| ||||||| ||||||| || |||| |||  ||||| | || |||||||||||||    
T  37769785 ataaattatttttatagcaaatgataaaataaagttaaattatttttgtttatgctacaagttgtttttataagctgtcttgcagaa 37769699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 46225762 - 46225820
Alignment:
Q  158 ataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaa 216  Q
    ||||| ||| |||||||||||||| | ||||||||||||||| ||||| ||||| ||||    
T  46225762 ataaaattagattgtttttgtatatgttataagccgttttcataaactatcttgaagaa 46225820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 6292610 - 6292647
Alignment:
Q  249 tcagtagataagctaaaataagtcaatctaaacaaacc 286  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  6292610 tcagtagataagctcaaataagtcaatccaaacaaacc 6292647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 34290203 - 34290268
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaac 217  Q
    ||||||||||| |||| ||  ||||||||||||||||||| ||||||| || || ||||| |||||    
T  34290203 gataaaataaagttaattttattttgtataagctataagctgttttcataagctatcttgaagaac 34290268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 6659800 - 6659836
Alignment:
Q  251 agtagataagctaaaataagtcaatctaaacaaaccc 287  Q
    |||||||||||||||||||||||||| |||| |||||    
T  6659800 agtagataagctaaaataagtcaatccaaacgaaccc 6659836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 32958756 - 32958788
Alignment:
Q  250 cagtagataagctaaaataagtcaatctaaaca 282  Q
    ||||||||||||| |||||||||||||||||||    
T  32958756 cagtagataagctcaaataagtcaatctaaaca 32958788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 34619481 - 34619445
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctata 188  Q
    ||||||||||  |||||||||||||||||||||||||    
T  34619481 gataaaataaggttaaattgtttttgtataagctata 34619445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 37841965 - 37842001
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctata 188  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  37841965 gataaaataaagttaaattgttttcgtataagctata 37842001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 30956745 - 30956664
Alignment:
Q  136 tatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaac 217  Q
    |||||||||||||   ||||||||||| |||||||||||||||||| ||||||||  |||||||||| || ||||| |||||    
T  30956745 tatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaac 30956664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 30972557 - 30972476
Alignment:
Q  136 tatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaac 217  Q
    |||||||||||||   ||||||||||| |||||||||||||||||| ||||||||  |||||||||| || ||||| |||||    
T  30972557 tatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaac 30972476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 32095317 - 32095247
Alignment:
Q  129 tataaattatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgttttca 199  Q
    ||||| ||||||||||| ||   |||||||| || ||||||||||||||||||| ||||||||||||||||    
T  32095317 tataagttatttctataacaaaagataaaattaagttaaattgtttttgtataaactataagccgttttca 32095247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 25447368 - 25447300
Alignment:
Q  131 taaattatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgttttca 199  Q
    |||| ||||||||||| |   ||||||||||| |||||||||||||||||||||||||| | |||||||    
T  25447368 taaactatttctatagtaaaagataaaataaacttaaattgtttttgtataagctataaactgttttca 25447300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 44061142 - 44061079
Alignment:
Q  136 tatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgttttca 199  Q
    |||||||||||||   ||||||||||  ||||||||||||| |||||||||||||  |||||||    
T  44061142 tatttctatagcaaaagataaaataaggttaaattgtttttctataagctataagttgttttca 44061079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 24684926 - 24684888
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataag 190  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  24684926 gataaaataaattttaattgtttttgtatatgctataag 24684888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 33405286 - 33405205
Alignment:
Q  136 tatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaac 217  Q
    |||||||||||||   | ||||||||| |||| |||||||  |||||||||||||| ||||||| || || ||||| |||||    
T  33405286 tatttctatagcaaaaggtaaaataaagttaatttgttttcatataagctataagctgttttcataagctatcttgaagaac 33405205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 283
Target Start/End: Complemental strand, 8007616 - 8007584
Alignment:
Q  251 agtagataagctaaaataagtcaatctaaacaa 283  Q
    |||||||||||||||||||||||||| ||||||    
T  8007616 agtagataagctaaaataagtcaatccaaacaa 8007584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 34083644 - 34083581
Alignment:
Q  136 tatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgttttca 199  Q
    |||||||||||||   ||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  34083644 tatttctatagcaaaagataaaataaagttaaattgtttgtgtataagctataagctgttttca 34083581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 30180001 - 30180063
Alignment:
Q  135 ttatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgtttt 197  Q
    ||||||| ||||||   ||||||||||| |||||||||||| ||||||||||||||| |||||    
T  30180001 ttatttcgatagcaaaagataaaataaagttaaattgttttcgtataagctataagctgtttt 30180063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 12110327 - 12110392
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaac 217  Q
    ||||||||||| | |||||||||| ||||||||||||||| ||||||| || || ||||| |||||    
T  12110327 gataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaac 12110392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 22283863 - 22283795
Alignment:
Q  135 ttatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaac 204  Q
    ||||||||||||||  | |||||||||| ||||||||||||||||| |||||||| | ||||||| ||||    
T  22283863 ttatttctatagcaaag-ataaaataaagttaaattgtttttgtatcagctataaactgttttcataaac 22283795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 39907772 - 39907828
Alignment:
Q  154 taaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtctt 210  Q
    ||||||||  |||||||||||||||||||||||||| | ||||||| ||||| ||||    
T  39907772 taaaataaggttaaattgtttttgtataagctataaactgttttcataaactatctt 39907828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 43694667 - 43694628
Alignment:
Q  158 ataaatttaaattgtttttgtataagctataagccgtttt 197  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  43694667 ataaatttaaattgtttttgtatatgctataagctgtttt 43694628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 46280369 - 46280330
Alignment:
Q  158 ataaatttaaattgtttttgtataagctataagccgtttt 197  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  46280369 ataaatttaaattgtttttgtatatgctataagctgtttt 46280330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 11783003 - 11782957
Alignment:
Q  241 aacttacttcagtagataagctaaaataagtcaatctaaacaaaccc 287  Q
    ||||||| ||||||||||| || ||||||||||||| ||||||||||    
T  11783003 aacttacatcagtagataatctcaaataagtcaatccaaacaaaccc 11782957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 13960884 - 13960921
Alignment:
Q  153 ataaaataaatttaaattgtttttgtataagctataag 190  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  13960884 ataaaataaagttaaattgtttttgtataacctataag 13960921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 47177606 - 47177667
Alignment:
Q  155 aaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaa 216  Q
    |||| ||| ||||||||||||  |||||||||||||| |||||||||| || ||||| ||||    
T  47177606 aaaacaaagttaaattgttttcatataagctataagctgttttcaaaagctatcttggagaa 47177667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 3968321 - 3968277
Alignment:
Q  129 tataaattatttctatagcatgggataaaataaatttaaattgtt 173  Q
    ||||| ||||||||||||||   ||||||||||||||||||||||    
T  3968321 tataagttatttctatagcaaaagataaaataaatttaaattgtt 3968277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 17248525 - 17248561
Alignment:
Q  155 aaaataaatttaaattgtttttgtataagctataagc 191  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  17248525 aaaaaaaagttaaattgtttttgtataagctataagc 17248561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 197
Target Start/End: Complemental strand, 34672878 - 34672834
Alignment:
Q  154 taaaataaa-tttaaattgtttttgtataagctataagccgtttt 197  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||    
T  34672878 taaaataaagtttaaattgttttcgtataagctataagtcgtttt 34672834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 9093659 - 9093601
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtctt 210  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||| || |||||||    
T  9093659 gataaaataaagttaaattgttttcgtataagctataagctgttttcataagctgtctt 9093601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 507164 - 507222
Alignment:
Q  129 tataaattatttctatagcatgggataaaataaatttaaattgtttttgtataagctat 187  Q
    ||||||||||||||||| ||   ||||||||||| ||| ||||||||||||||||||||    
T  507164 tataaattatttctataacaaaagataaaataaagttagattgtttttgtataagctat 507222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 9559667 - 9559595
Alignment:
Q  129 tataaattatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgttttcaaa 201  Q
    ||||| ||||||||||||||   |||||||||||||||||||||||| ||| || ||| || | |||||||||    
T  9559667 tataagttatttctatagcaaaagataaaataaatttaaattgttttcgtagaaactacaaactgttttcaaa 9559595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 2735036 - 2735083
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagccgttttca 199  Q
    ||||||||||| ||||||| ||||||||||| |||||||| |||||||    
T  2735036 gataaaataaagttaaattatttttgtataatctataagctgttttca 2735083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 186
Target Start/End: Complemental strand, 28621213 - 28621179
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagcta 186  Q
    ||||||||||| |||||||||||||||||||||||    
T  28621213 gataaaataaagttaaattgtttttgtataagcta 28621179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 3785803 - 3785758
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagccgtttt 197  Q
    ||||||||||| ||||| |||||| ||||||||||||||| |||||    
T  3785803 gataaaataaagttaaactgttttcgtataagctataagctgtttt 3785758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 6909972 - 6909928
Alignment:
Q  155 aaaataaatttaaattgtttttgtataagctataagccgttttca 199  Q
    |||||||| |||||||||||||||||| ||||||||  |||||||    
T  6909972 aaaataaagttaaattgtttttgtatatgctataagttgttttca 6909928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 12425538 - 12425603
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaac 217  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||| || || ||||| |||||    
T  12425538 gataaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaac 12425603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 187
Target Start/End: Original strand, 41819579 - 41819614
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctat 187  Q
    ||||||||||||||||||||||||||||||||||||    
T  41819579 gataaaataaatttaaattgtttttgtataagctat 41819614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 1465138 - 1465084
Alignment:
Q  136 tatttctatagcatgggataaaataaatttaaattgtttttgtataagctataag 190  Q
    |||||||||||||| |||||||||||| |||||| | |||||| |||||||||||    
T  1465138 tatttctatagcataggataaaataaagttaaatcgcttttgtgtaagctataag 1465084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 18857503 - 18857444
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttg 211  Q
    ||||||||||| | ||||||||||| ||||| |||||||| ||||||| || ||||||||    
T  18857503 gataaaataaagtcaaattgtttttctataatctataagctgttttcataagctgtcttg 18857444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 32372591 - 32372638
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagccgttttca 199  Q
    ||||||||||| || ||||||||||||||| ||||||||| |||||||    
T  32372591 gataaaataaagttgaattgtttttgtatatgctataagctgttttca 32372638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 465921 - 465954
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagct 185  Q
    ||||||||||| ||||||||||||||||||||||    
T  465921 gataaaataaagttaaattgtttttgtataagct 465954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 35446022 - 35446059
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataa 189  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  35446022 gataaaataaagttaaattgtttttgtatacgctataa 35446059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 41981968 - 41981915
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaact 205  Q
    |||||||||||  |||| ||||||||||||| |||||||| ||||||| |||||    
T  41981968 gataaaataaagctaaaatgtttttgtataaactataagctgttttcataaact 41981915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 42646881 - 42646934
Alignment:
Q  151 ggataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaac 204  Q
    ||||||||| || ||||||||||||||| |||||||||||  ||||||| ||||    
T  42646881 ggataaaattaagttaaattgtttttgtttaagctataaggtgttttcataaac 42646934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 3280719 - 3280655
Alignment:
Q  218 atgttataaactgttttcataagaacttacttcagtagataagctaaaataagtcaatctaaaca 282  Q
    |||| |||| |||||||||||||  ||||  |||||||||||| | ||||||||||||| |||||    
T  3280719 atgtcataagctgttttcataagtgcttaaatcagtagataagtttaaataagtcaatccaaaca 3280655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 42582796 - 42582760
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctata 188  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  42582796 gataaaataaatttaaattatttttgtatatgctata 42582760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 43199896 - 43199858
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataag 190  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  43199896 gataaaataaagttaaattgtttttgtataagctataag 43199858  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 12464576 - 12464511
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaac 217  Q
    ||||||||||| |||||||||||||||||| |||||||||  |||||| || || ||||| |||||    
T  12464576 gataaaataaagttaaattgtttttgtatatgctataagctattttcataagctatcttggagaac 12464511  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 36114626 - 36114588
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataag 190  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  36114626 gataaaataaagttaaattgtttttgtataagcaataag 36114588  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 18066099 - 18066160
Alignment:
Q  156 aaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaac 217  Q
    ||||||| ||||||||||||  |||||||||||||| ||||||| || || ||||| |||||    
T  18066099 aaataaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaac 18066160  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 26626852 - 26626905
Alignment:
Q  164 ttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaac 217  Q
    |||||||||||| |||||||||| |||| ||||||| || || |||||||||||    
T  26626852 ttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaac 26626905  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 2416257 - 2416325
Alignment:
Q  129 tataaattatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagccgtttt 197  Q
    ||||| |||||||| |||||   |||||||| || ||||||||||||  |||||||||||||| |||||    
T  2416257 tataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataagctgtttt 2416325  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 3611170 - 3611222
Alignment:
Q  129 tataaattatttctatagcatgggataaaataaatttaaattgtttttgtata 181  Q
    ||||| ||||||||||||||   | ||||||||| ||||||||||||||||||    
T  3611170 tataagttatttctatagcaaaaggtaaaataaagttaaattgtttttgtata 3611222  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 41851502 - 41851566
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagccgttttcaaaaactgtcttgcagaa 216  Q
    |||| |||||| |||||||||||||||||| ||||||||  ||||||| || || ||||| ||||    
T  41851502 gatacaataaagttaaattgtttttgtatatgctataagttgttttcagaagctatcttggagaa 41851566  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 44439462 - 44439426
Alignment:
Q  153 ataaaataaatttaaattgtttttgtataagctataa 189  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  44439462 ataaaataaagttaaactgtttttgtataagctataa 44439426  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000009; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 2482832 - 2482879
Alignment:
Q  152 gataaaataaatttaaattgtttttgtataagctataagccgttttca 199  Q
    ||||||||||| | ||| |||||||||||||||||||||| |||||||    
T  2482832 gataaaataaagtcaaaatgtttttgtataagctataagctgttttca 2482879  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 10758380 - 10758321
Alignment:
Q  131 taaattatttctatagcatgggataaaataaatttaaattgtttttgtataagctataag 190  Q
    |||| |||||||||||||    |||||||||| |||||||||||||||||| ||||||||    
T  10758380 taaactatttctatagcaaatcataaaataaagttaaattgtttttgtatatgctataag 10758321  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 26771216 - 26771271
Alignment:
Q  136 tatttctatagcatgggataaaataaatttaaattgtttttgtataagctataagc 191  Q
    ||||||||||| |  | |||||||||| |||||||||||||||||| |||||||||    
T  26771216 tatttctatagtaaagcataaaataaacttaaattgtttttgtatatgctataagc 26771271  T

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Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 16733980 - 16734034
Alignment:
Q  136 tatttctatagcatgggataaaataaatttaaattgtttttgtataagctataag 190  Q
    |||||||||||||   |||||| |||| |||||||||||||||||| ||||||||    
T  16733980 tatttctatagcaaaagataaactaaacttaaattgtttttgtatatgctataag 16734034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 4390316 - 4390356
Alignment:
Q  234 tcataagaacttacttcagtagataagctaaaataagtcaa 274  Q
    ||||||| ||||| | |||||||||||||||||||||||||    
T  4390316 tcataagtacttattccagtagataagctaaaataagtcaa 4390356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 38036214 - 38036178
Alignment:
Q  153 ataaaataaatttaaattgtttttgtataagctataa 189  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  38036214 ataaaataaattcaaattgtttttgtgtaagctataa 38036178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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