View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2932_high_36 (Length: 272)

Name: NF2932_high_36
Description: NF2932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2932_high_36
NF2932_high_36
[»] chr6 (25 HSPs)
chr6 (151-251)||(34489142-34489244)
chr6 (157-248)||(17237371-17237461)
chr6 (155-248)||(33740664-33740757)
chr6 (167-248)||(33109744-33109824)
chr6 (160-247)||(4468462-4468548)
chr6 (157-248)||(23947404-23947494)
chr6 (155-247)||(8196494-8196586)
chr6 (157-230)||(8496865-8496937)
chr6 (157-248)||(25064135-25064227)
chr6 (157-230)||(12652840-12652912)
chr6 (155-230)||(7876150-7876224)
chr6 (169-248)||(33543706-33543784)
chr6 (155-248)||(16419056-16419149)
chr6 (151-230)||(7881208-7881286)
chr6 (158-248)||(8028204-8028294)
chr6 (157-247)||(10228579-10228669)
chr6 (157-247)||(28635208-28635299)
chr6 (157-248)||(12165741-12165831)
chr6 (157-230)||(17334675-17334747)
chr6 (151-230)||(5582757-5582835)
chr6 (188-251)||(25337501-25337564)
chr6 (173-248)||(35001506-35001581)
chr6 (167-210)||(8266545-8266588)
chr6 (175-241)||(13436705-13436770)
chr6 (157-248)||(4088359-4088451)
[»] chr8 (33 HSPs)
chr8 (151-251)||(16794194-16794293)
chr8 (157-242)||(33342344-33342429)
chr8 (155-248)||(35580363-35580455)
chr8 (157-248)||(11725589-11725679)
chr8 (155-241)||(44100026-44100111)
chr8 (157-247)||(28239740-28239830)
chr8 (167-248)||(19876129-19876209)
chr8 (157-248)||(11196799-11196887)
chr8 (157-251)||(15597250-15597344)
chr8 (157-248)||(14907009-14907101)
chr8 (157-248)||(42448113-42448205)
chr8 (157-248)||(43890210-43890302)
chr8 (151-248)||(9072618-9072716)
chr8 (155-248)||(33895986-33896080)
chr8 (176-248)||(43192432-43192503)
chr8 (155-248)||(44577941-44578034)
chr8 (158-248)||(2655777-2655868)
chr8 (157-230)||(9498707-9498779)
chr8 (157-230)||(9619463-9619535)
chr8 (157-248)||(4808871-4808962)
chr8 (157-248)||(17949154-17949245)
chr8 (151-248)||(27747199-27747295)
chr8 (157-251)||(15046800-15046895)
chr8 (185-249)||(33298791-33298854)
chr8 (157-248)||(34611711-34611802)
chr8 (157-234)||(17427319-17427395)
chr8 (157-230)||(32724594-32724665)
chr8 (157-248)||(11464079-11464169)
chr8 (188-251)||(39153225-39153291)
chr8 (157-234)||(17430969-17431045)
chr8 (157-202)||(29777136-29777181)
chr8 (157-248)||(37565965-37566057)
chr8 (167-245)||(18733938-18734015)
[»] chr7 (36 HSPs)
chr7 (157-247)||(23425459-23425548)
chr7 (157-248)||(31235878-31235969)
chr7 (157-248)||(48207802-48207892)
chr7 (151-248)||(35667318-35667414)
chr7 (157-247)||(20116483-20116572)
chr7 (155-248)||(1485343-1485435)
chr7 (167-242)||(36143776-36143850)
chr7 (157-248)||(45199118-45199208)
chr7 (157-248)||(26492265-26492356)
chr7 (161-248)||(2843315-2843400)
chr7 (157-248)||(6001921-6002012)
chr7 (155-248)||(35496261-35496354)
chr7 (157-248)||(46821914-46822006)
chr7 (157-248)||(26583614-26583705)
chr7 (157-248)||(21266292-21266381)
chr7 (157-248)||(42067147-42067237)
chr7 (157-247)||(42311180-42311270)
chr7 (152-245)||(3860847-3860938)
chr7 (168-248)||(1448916-1448995)
chr7 (157-248)||(22927956-22928047)
chr7 (157-247)||(42408262-42408352)
chr7 (164-230)||(46338960-46339025)
chr7 (157-248)||(433778-433869)
chr7 (165-248)||(14627965-14628048)
chr7 (196-248)||(17223085-17223136)
chr7 (151-248)||(23085414-23085512)
chr7 (167-229)||(32684595-32684656)
chr7 (173-251)||(46818499-46818577)
chr7 (167-245)||(1100856-1100932)
chr7 (157-242)||(32522019-32522108)
chr7 (195-242)||(43369858-43369904)
chr7 (167-239)||(1097698-1097770)
chr7 (207-248)||(17499745-17499786)
chr7 (207-248)||(17553428-17553469)
chr7 (176-244)||(7740559-7740626)
chr7 (207-251)||(17611075-17611119)
[»] chr3 (32 HSPs)
chr3 (157-251)||(46178474-46178568)
chr3 (157-251)||(37169128-37169222)
chr3 (155-248)||(50611503-50611596)
chr3 (157-248)||(29503360-29503450)
chr3 (157-248)||(39917483-39917573)
chr3 (157-248)||(46934540-46934630)
chr3 (155-248)||(4172462-4172555)
chr3 (157-248)||(25162334-25162424)
chr3 (155-248)||(25631612-25631706)
chr3 (157-248)||(36906019-36906110)
chr3 (157-228)||(22802919-22802990)
chr3 (157-244)||(38440668-38440754)
chr3 (156-248)||(38855122-38855215)
chr3 (157-248)||(44907484-44907576)
chr3 (157-230)||(3850560-3850632)
chr3 (163-230)||(35499306-35499372)
chr3 (157-248)||(49552310-49552400)
chr3 (155-248)||(4178460-4178553)
chr3 (157-245)||(14464405-14464495)
chr3 (162-248)||(32607370-32607457)
chr3 (158-248)||(2342390-2342480)
chr3 (188-247)||(47980750-47980809)
chr3 (188-247)||(47990037-47990096)
chr3 (188-247)||(47999324-47999383)
chr3 (188-247)||(48008611-48008670)
chr3 (167-248)||(17237710-17237793)
chr3 (157-219)||(36735267-36735329)
chr3 (157-230)||(12115991-12116063)
chr3 (159-232)||(6913249-6913321)
chr3 (175-241)||(54378816-54378881)
chr3 (207-248)||(30829921-30829962)
chr3 (157-229)||(42719418-42719489)
[»] chr4 (43 HSPs)
chr4 (157-251)||(35965058-35965152)
chr4 (157-248)||(21090065-21090155)
chr4 (157-248)||(34024523-34024613)
chr4 (157-241)||(12265367-12265451)
chr4 (157-248)||(51317898-51317988)
chr4 (155-248)||(38706796-38706889)
chr4 (158-242)||(18139005-18139089)
chr4 (158-242)||(49126218-49126302)
chr4 (157-248)||(10359633-10359723)
chr4 (157-248)||(31381758-31381848)
chr4 (151-230)||(47416790-47416868)
chr4 (157-247)||(37188681-37188769)
chr4 (167-248)||(8009447-8009526)
chr4 (157-230)||(9283823-9283895)
chr4 (157-248)||(43444305-43444396)
chr4 (157-248)||(10389840-10389930)
chr4 (151-230)||(43154126-43154203)
chr4 (157-248)||(9528963-9529055)
chr4 (159-248)||(9645635-9645724)
chr4 (163-248)||(35261109-35261194)
chr4 (157-248)||(53616736-53616828)
chr4 (163-248)||(4643776-4643861)
chr4 (157-230)||(20569164-20569236)
chr4 (157-245)||(35351250-35351337)
chr4 (157-248)||(50766595-50766686)
chr4 (165-248)||(56194519-56194604)
chr4 (157-248)||(1531818-1531911)
chr4 (167-248)||(32952834-32952913)
chr4 (167-248)||(2115673-2115755)
chr4 (157-212)||(5333581-5333636)
chr4 (157-248)||(25273787-25273886)
chr4 (164-210)||(5333655-5333701)
chr4 (157-248)||(6972721-6972813)
chr4 (164-230)||(49680456-49680521)
chr4 (151-240)||(1008201-1008289)
chr4 (188-247)||(2624441-2624500)
chr4 (176-248)||(29965565-29965638)
chr4 (169-251)||(52098002-52098084)
chr4 (164-221)||(27593952-27594008)
chr4 (157-248)||(868069-868165)
chr4 (171-248)||(14183729-14183806)
chr4 (207-248)||(1931802-1931843)
chr4 (175-230)||(23100617-23100673)
[»] chr5 (32 HSPs)
chr5 (151-251)||(15570806-15570906)
chr5 (157-248)||(21060368-21060458)
chr5 (157-248)||(781292-781382)
chr5 (155-248)||(2057924-2058017)
chr5 (157-248)||(28235488-28235578)
chr5 (152-242)||(6445834-6445923)
chr5 (157-248)||(27266945-27267037)
chr5 (157-248)||(30371627-30371719)
chr5 (157-247)||(35475424-35475513)
chr5 (155-241)||(36344583-36344668)
chr5 (157-230)||(10649356-10649428)
chr5 (161-248)||(7241689-7241776)
chr5 (161-248)||(7246865-7246952)
chr5 (157-248)||(16981193-16981283)
chr5 (157-248)||(19281031-19281121)
chr5 (181-248)||(27751853-27751919)
chr5 (157-248)||(18677551-18677643)
chr5 (157-248)||(7150421-7150512)
chr5 (176-248)||(30298130-30298201)
chr5 (167-239)||(11767720-11767793)
chr5 (157-230)||(26578152-26578224)
chr5 (157-228)||(43261924-43261994)
chr5 (173-248)||(19259897-19259974)
chr5 (167-247)||(27576437-27576516)
chr5 (157-233)||(34881613-34881687)
chr5 (157-248)||(7887024-7887114)
chr5 (173-230)||(20257799-20257855)
chr5 (167-248)||(42886392-42886471)
chr5 (156-242)||(42432802-42432887)
chr5 (157-234)||(35631791-35631868)
chr5 (157-245)||(42432169-42432254)
chr5 (158-242)||(14211105-14211187)
[»] chr2 (39 HSPs)
chr2 (157-248)||(27477059-27477149)
chr2 (157-248)||(32913146-32913236)
chr2 (159-248)||(4192745-4192833)
chr2 (157-248)||(6173536-6173627)
chr2 (157-248)||(41430932-41431023)
chr2 (157-248)||(45128108-45128199)
chr2 (157-247)||(26025497-26025587)
chr2 (157-248)||(40626114-40626204)
chr2 (155-245)||(3725083-3725172)
chr2 (157-248)||(21570493-21570585)
chr2 (157-248)||(30420581-30420673)
chr2 (157-230)||(27249256-27249328)
chr2 (157-248)||(40660018-40660106)
chr2 (157-248)||(2808558-2808647)
chr2 (157-248)||(8971713-8971805)
chr2 (167-248)||(8805781-8805861)
chr2 (165-246)||(31581808-31581888)
chr2 (167-248)||(34598902-34598982)
chr2 (157-230)||(36233909-36233981)
chr2 (167-248)||(39641944-39642026)
chr2 (151-230)||(42949612-42949691)
chr2 (169-248)||(3270315-3270393)
chr2 (157-248)||(7015797-7015887)
chr2 (157-248)||(32680667-32680759)
chr2 (157-248)||(459360-459451)
chr2 (176-248)||(22421659-22421730)
chr2 (156-248)||(32197881-32197972)
chr2 (157-248)||(4228036-4228128)
chr2 (175-248)||(8308097-8308167)
chr2 (157-248)||(9986428-9986524)
chr2 (157-248)||(25086938-25087032)
chr2 (207-248)||(17319276-17319317)
chr2 (164-248)||(20047168-20047252)
chr2 (157-230)||(41712870-41712942)
chr2 (156-208)||(24587617-24587669)
chr2 (188-230)||(27949358-27949399)
chr2 (195-248)||(3269197-3269251)
chr2 (195-248)||(3269756-3269810)
chr2 (157-220)||(30923589-30923649)
[»] chr1 (38 HSPs)
chr1 (157-248)||(14545424-14545514)
chr1 (157-251)||(39987294-39987387)
chr1 (155-248)||(51871766-51871858)
chr1 (157-248)||(51868731-51868822)
chr1 (157-248)||(27872643-27872733)
chr1 (157-248)||(38520620-38520710)
chr1 (157-230)||(5701161-5701233)
chr1 (157-230)||(7997691-7997763)
chr1 (157-248)||(28035043-28035134)
chr1 (157-247)||(18569397-18569487)
chr1 (157-248)||(30818432-30818522)
chr1 (159-248)||(9919295-9919384)
chr1 (155-248)||(20266204-20266297)
chr1 (157-230)||(25728064-25728136)
chr1 (157-248)||(25406370-25406461)
chr1 (174-248)||(34519054-34519127)
chr1 (163-248)||(3871319-3871403)
chr1 (166-248)||(11453847-11453930)
chr1 (157-230)||(35584726-35584798)
chr1 (157-245)||(50272229-50272317)
chr1 (166-242)||(7312191-7312266)
chr1 (151-248)||(19723231-19723328)
chr1 (158-248)||(5324644-5324733)
chr1 (164-230)||(19716002-19716067)
chr1 (157-230)||(9172392-9172464)
chr1 (157-230)||(9180374-9180446)
chr1 (157-248)||(33291504-33291596)
chr1 (155-248)||(40646590-40646684)
chr1 (155-230)||(40881118-40881192)
chr1 (155-248)||(44637323-44637416)
chr1 (156-248)||(30558742-30558832)
chr1 (157-230)||(50148276-50148348)
chr1 (157-248)||(7342626-7342717)
chr1 (166-230)||(30878988-30879051)
chr1 (163-248)||(50166185-50166270)
chr1 (169-230)||(45426167-45426227)
chr1 (195-248)||(31836748-31836802)
chr1 (216-248)||(48365851-48365883)
[»] scaffold0311 (1 HSPs)
scaffold0311 (152-248)||(8615-8710)
[»] scaffold0014 (1 HSPs)
scaffold0014 (171-248)||(201458-201534)
[»] scaffold0495 (1 HSPs)
scaffold0495 (157-247)||(5298-5388)
[»] scaffold0146 (1 HSPs)
scaffold0146 (167-248)||(16406-16489)
[»] scaffold0003 (1 HSPs)
scaffold0003 (157-247)||(361886-361971)
[»] scaffold0426 (1 HSPs)
scaffold0426 (155-209)||(6236-6290)
[»] scaffold0002 (1 HSPs)
scaffold0002 (175-242)||(453851-453917)
[»] scaffold0113 (1 HSPs)
scaffold0113 (167-241)||(36780-36852)


Alignment Details
Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 34489142 - 34489244
Alignment:
Q  151 gacttaaaatcacccctcttcatctttttctctataattcaatat--aaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34489142 gacttaaaatcacccctcttcatctttttctctctaattcaatatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 34489241  T
Q  249 cga 251  Q
    |||    
T  34489242 cga 34489244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 17237461 - 17237371
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||    
T  17237461 aaatcacccctcttcatctttttctctatatttcaatctaaataagtta-ttttcacatagatctaggttttttctttgtgatttcagcatc 17237371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 33740757 - 33740664
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||    
T  33740757 taaaatcacccctcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatttaggtttttttctttgtgatttcatcatc 33740664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 33109744 - 33109824
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  33109744 tcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatc 33109824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 4468462 - 4468548
Alignment:
Q  160 tcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcat 247  Q
    ||||||||||||||||| |||||| || |||||| ||||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  4468462 tcacccctcttcatcttgttctctctatttcaatctaaataagtga-ttttcatatagatctaggttttttctttgtgatttcatcat 4468548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 23947494 - 23947404
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||| |||||||| |||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  23947494 aaatcacccatcttcatcgttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatc 23947404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 247
Target Start/End: Complemental strand, 8196586 - 8196494
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcat 247  Q
    ||||||||||| | ||||||||||||||| || |||||| ||||||||||| |||||||||||||||||| ||||||||| |||||||||||||    
T  8196586 taaaatcacccgtattcatctttttctctctatttcaatctaaataagtga-ttttcacatagatctaggtttttttctttgtgatttcatcat 8196494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 8496865 - 8496937
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  8496865 aaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 8496937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 25064135 - 25064227
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    |||||||| |||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||  ||||||||| || |||||||||||    
T  25064135 aaatcacctctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggttttttttctttgtaatttcatcatc 25064227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 12652840 - 12652912
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||| ||||||    
T  12652840 aaatcacccctcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatctagatttttt 12652912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 7876224 - 7876150
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||| ||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||| ||||||    
T  7876224 taaaatcacccatcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctagatttttt 7876150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 33543784 - 33543706
Alignment:
Q  169 ttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||||| || | ||||||||||||||||| |||||    
T  33543784 ttcatctttttctctatatttcaatctaaataagtaatttttcacatagatttaag-tttttcttcgtgatttcgtcatc 33543706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 16419056 - 16419149
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatc-taggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||| ||||||||||||||||| || |||||| |||||||||||  ||||||||||||| | | ||||||||| ||||||||||||||    
T  16419056 taaaatcacccatcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctttgtttttttctttgtgatttcatcatc 16419149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 7881286 - 7881208
Alignment:
Q  151 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||| ||||||||  ||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||| ||||||    
T  7881286 gacttgaaatcacctttcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctagatttttt 7881208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 8028294 - 8028204
Alignment:
Q  158 aatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatct-aggttttttcttcgtgatttcatcatc 248  Q
    ||||||||| |||||||||||||||| |  |||||| ||||||||||| ||||||||||||||| || |||||||||  |||||||||||||    
T  8028294 aatcaccccacttcatctttttctctctgtttcaatctaaataagtga-ttttcacatagatctaagtttttttctttatgatttcatcatc 8028204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 10228579 - 10228669
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatcta-ggttttttcttcgtgatttcatcat 247  Q
    ||||||||||||||||||||| ||||| || |||||| ||||||||||| |||| ||||| ||||| | ||||||||| |||||||||||||    
T  10228579 aaatcacccctcttcatctttctctctctacttcaatctaaataagtgactttt-acatatatctatgtttttttctttgtgatttcatcat 10228669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 28635299 - 28635208
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatt-tttcacatagatctaggttttttcttcgtgatttcatcat 247  Q
    |||||| |||||||||| ||||||| | || |||||| ||||||||||||| ||| ||||||||||| ||||||||| ||||||||| ||||    
T  28635299 aaatcatccctcttcatatttttctttttatttcaatttaaataagtgattcttttacatagatctaagttttttctacgtgatttcgtcat 28635208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 12165741 - 12165831
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||| ||||||||||||||| |   || |||||| ||||||||||||||| ||||||||| ||||||||||||| ||| ||| ||||||    
T  12165741 aaatcactcctcttcatctttttatgcctatttcaatctaaataagtgatttt-cacatagatttaggttttttctttgtggttttatcatc 12165831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 17334675 - 17334747
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||  ||||||||||||||| | || |||||| ||||||||||| |||||||||||||||| |||||||    
T  17334675 aaatcaccaatcttcatctttttctgtttatttcaatctaaataagtga-ttttcacatagatctaagtttttt 17334747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 5582835 - 5582757
Alignment:
Q  151 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||| |||||||| |||||||||||||||| |||| || ||| ||||||| ||| |||||| ||||||||| |||||||    
T  5582835 gacttgaaatcaccactcttcatctttttctttatattttaatctaaataaatga-ttttcaaatagatctaagtttttt 5582757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 25337501 - 25337564
Alignment:
Q  188 ttcaatataaataagtgatttttcacatagatctaggtttt-ttcttcgtgatttcatcatccga 251  Q
    |||||| ||||||| ||||||| |||||| ||||||||||| |||||||||||||| ||||||||    
T  25337501 ttcaatctaaataaatgatttt-cacataaatctaggtttttttcttcgtgatttcgtcatccga 25337564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 35001506 - 35001581
Alignment:
Q  173 tctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatc 248  Q
    ||||||||||| || || ||| ||||||||||| |||| ||||||||||| ||||||| ||| ||||||||||||||    
T  35001506 tctttttctctctattttaatctaaataagtgactttt-acatagatctatgtttttttctttgtgatttcatcatc 35001581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 8266545 - 8266588
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgattttt 210  Q
    ||||||||||||||||| || |||||| ||||||||||||||||    
T  8266545 tcttcatctttttctctctacttcaatctaaataagtgattttt 8266588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 13436705 - 13436770
Alignment:
Q  175 tttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgattt 241  Q
    ||||||||| || |||||| ||||||||||| |||||||||| |||||  |||||| ||||||||||    
T  13436705 tttttctctctatttcaatttaaataagtga-ttttcacataaatctatattttttattcgtgattt 13436770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 4088359 - 4088451
Alignment:
Q  157 aaatcacccctcttcatctttttc-tctataattcaatataaataagtgatttttcacatagatctag-gttttttcttcgtgatttcatcatc 248  Q
    ||||||||| ||||||| |||||  ||| || | |||| ||||||||||||||| |||||||||||||  |||||||||  |||||||||||||    
T  4088359 aaatcacccatcttcattttttttatctctattacaatctaaataagtgatttt-cacatagatctagttttttttctttttgatttcatcatc 4088451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 16794194 - 16794293
Alignment:
Q  151 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccg 250  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  16794194 gacttgaaatcacccatcttcatctttttctctctaattcaatctaaataagtgatttttcacataaatctagg-tttttcttcgtgatttcatcatccg 16794292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 33342344 - 33342429
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttc 242  Q
    |||||||||||||||||| |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33342344 aaatcacccctcttcatccttttttctctaattcaatctaaataagtgatttttcacatagatctaggttttttcttcgtgatttc 33342429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 35580363 - 35580455
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||| | ||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35580363 taaaatcactcatcttcatctttttctctctatttcaatttaaataagtgatttt-cacatagatctaggttttttcttcgtgatttcatcatc 35580455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 11725589 - 11725679
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||| ||||||||||| || |||||| |||||||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  11725589 aaatcacccctcttcgtctttttctctttatttcaatctaaataagtg-tttttcacatagatctaggttttttctttttgatttcatcatc 11725679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 44100111 - 44100026
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgattt 241  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||| | |||||||||||||||| |||||||||| |||||||    
T  44100111 taaaatcacccctcttcatctttttctctatatttcaatctaaataagtta-ttttcacatagatctaagttttttctttgtgattt 44100026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 28239740 - 28239830
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcat 247  Q
    |||||||| |||||||||||||||||| || |||||| |||||||||| ||||||||||||||||||||||| ||| || |||||| ||||    
T  28239740 aaatcacctctcttcatctttttctctctatttcaatctaaataagtgttttttcacatagatctaggttttctctacgcgatttcgtcat 28239830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 19876129 - 19876209
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||| ||| |||||| ||||||||||||||| |||||||||| |||||||||||| ||||||||||||||    
T  19876129 tcttcatctttttctcaatatttcaatctaaataagtgatttt-cacatagatcaaggttttttctttgtgatttcatcatc 19876209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 11196799 - 11196887
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||| || |||||||||||||||||||  |||||| ||||||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  11196799 aaatcatccatcttcatctttttctctat--ttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatc 11196887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 15597344 - 15597250
Alignment:
Q  157 aaatcacccctcttcatctttttctc-tataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccga 251  Q
    |||||||||||||||||||||||||  |  | |||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  15597344 aaatcacccctcttcatctttttctagtccatttcaatctaaataagtgatttt-cacatagatctaggttttttcttcatgatttcgtcatccga 15597250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 14907101 - 14907009
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggt--tttttcttcgtgatttcatcatc 248  Q
    ||||||||| ||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||||  |||||||| || |||||||||||    
T  14907101 aaatcacccatcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggttctttttctttgtaatttcatcatc 14907009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 42448205 - 42448113
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttt--tttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| ||| || ||||||||||||||  |||||| ||||||||||||||    
T  42448205 aaatcacccctcttcatctttttctctctatttcaatctaaataagtga-tttacatatagatctaggttttgtttctttgtgatttcatcatc 42448113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 43890302 - 43890210
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag--gttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| ||||||||||||   ||||||||| || |||||||||||    
T  43890302 aaatcacccctcttcatctttttctctttaattcaatctaaataagtga-ttttgacatagatctagattttttttctttgtaatttcatcatc 43890210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 9072618 - 9072716
Alignment:
Q  151 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag--gttttttcttcgtgatttcatcatc 248  Q
    ||||| ||||||||||||||||||||||||||| || |||||| |||||||||||  ||||||||| ||||||   ||||||||| ||||||||||||||    
T  9072618 gacttgaaatcacccctcttcatctttttctctctatttcaatttaaataagtga-ctttcacataaatctagattttttttctttgtgatttcatcatc 9072716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 33895986 - 33896080
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    |||| |||||||||||||||||||||||| || || ||| |||||||||||  |||||||||||||||||  ||||||||| ||||||||||||||    
T  33895986 taaagtcacccctcttcatctttttctctctatttaaatctaaataagtga-ctttcacatagatctaggttttttttctttgtgatttcatcatc 33896080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 43192503 - 43192432
Alignment:
Q  176 ttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||| || |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  43192503 ttttctctctatttcaatctaaataagtggttttt-acatagatctaggttttttcttcgtgatttcatcatc 43192432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 44577941 - 44578034
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||| ||||||||||||||||||| || |||||| ||| ||||||| ||| |||||||||||||| ||||||||| || |||||||||||    
T  44577941 taaaatcactcctcttcatctttttctctctatttcaatctaactaagtga-tttacacatagatctaggtttttttctttgtaatttcatcatc 44578034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 2655777 - 2655868
Alignment:
Q  158 aatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag--gttttttcttcgtgatttcatcatc 248  Q
    |||||||| ||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||   ||||||||| || |||||||||||    
T  2655777 aatcacccatcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctagattttttttctttgtaatttcatcatc 2655868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 9498779 - 9498707
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||||||||||||||| ||| || |||||| ||||||||||| ||||||||||||| ||||||||||    
T  9498779 aaatcacccctcttcatctttttatctttatttcaatctaaataagtga-ttttcacatagatttaggtttttt 9498707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 9619535 - 9619463
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||| ||| ||||||    
T  9619535 aaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatttagatttttt 9619463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 4808871 - 4808962
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag-gttttttcttcgtgatttcatcatc 248  Q
    |||| |||||||||||||||||| ||| || |||||| ||||||||||| |||||||||||||||||  ||||||||| || |||||||||||    
T  4808871 aaattacccctcttcatctttttttctttatttcaatgtaaataagtga-ttttcacatagatctagctttttttctttgtaatttcatcatc 4808962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 17949154 - 17949245
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag-gttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||| |||||||||| || |||||| |||||||| || ||||||||||||||| |  |||||| || ||||||||||||||    
T  17949154 aaatcacccctcttcacctttttctctctatttcaatctaaataagcga-ttttcacatagatcttgatttttttatttgtgatttcatcatc 17949245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 248
Target Start/End: Complemental strand, 27747295 - 27747199
Alignment:
Q  151 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||| ||||||||  ||||||||||||| |||  | |||||| ||||||||| ||||| |||||| || || |||||||||||||||||||| ||||    
T  27747295 gacttgaaatcaccattcttcatctttttatctccatttcaatttaaataagtaatttt-cacataaatataagttttttcttcgtgatttcaccatc 27747199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 15046800 - 15046895
Alignment:
Q  157 aaatcacccctcttcatctttttctc-tataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatccga 251  Q
    |||||||| ||||||||||||||||  |  | ||||||  || ||||||||||| |||||||||||||| |||||||||||||||||| ||||||||    
T  15046800 aaatcacctctcttcatctttttctagtccatttcaattcaagtaagtgatttt-cacatagatctaggtttttttcttcgtgatttcgtcatccga 15046895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 33298791 - 33298854
Alignment:
Q  185 taattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatcc 249  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||  ||| |||||||| ||||||    
T  33298791 taattcaatctaaataagtgatttt-cacatagatctaggttttacctttgtgatttcgtcatcc 33298854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 34611711 - 34611802
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||| | ||||||| ||||||| | || |||| | ||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||||    
T  34611711 aaatcactcatcttcatatttttctttctatttcagtctaaataagtga-ttttcacataaatctaggtttttttctttgtgatttcatcatc 34611802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 17427395 - 17427319
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc 234  Q
    ||||| ||| || |||||||||||||| || |||| | |||||||||| |||| || |||||||||||||||||||||    
T  17427395 aaatcccccatcatcatctttttctctctatttcagtgtaaataagtgctttt-caaatagatctaggttttttcttc 17427319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 32724665 - 32724594
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    |||||||  ||||||||||||| |||| || |||||| ||||||||||| ||||||||||||||||| ||||||    
T  32724665 aaatcacttctcttcatctttt-ctctctatttcaatctaaataagtga-ttttcacatagatctagatttttt 32724594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 11464079 - 11464169
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag--gttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||||  | |||||| || |||||| | ||||||||||||| |||||||||||||   ||||||||| || |||||||||||    
T  11464079 aaatcacccctcttcat--tcttctctttatttcaatttgaataagtgatttt-cacatagatctagattttttttctttgtaatttcatcatc 11464169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 39153291 - 39153225
Alignment:
Q  188 ttcaatataaataagtgatttttcacatagatctaggt----tttttcttcgtgatttcatcatccga 251  Q
    |||||| ||||||||||||||| ||||||||| |||||    ||||||||||||||||| ||||||||    
T  39153291 ttcaatttaaataagtgatttt-cacatagatttaggtattttttttcttcgtgatttcgtcatccga 39153225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 17431045 - 17430969
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc 234  Q
    ||||| ||| || |||||||| ||||| ||  ||||| |||||||||| |||| || |||||||||||||||||||||    
T  17431045 aaatcccccatcatcatctttctctctctatgtcaatctaaataagtgctttt-cagatagatctaggttttttcttc 17430969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 29777136 - 29777181
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataag 202  Q
    ||||||| ||||||||||||||||||| || |||||| ||||||||    
T  29777136 aaatcactcctcttcatctttttctctctatttcaatctaaataag 29777181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 37566057 - 37565965
Alignment:
Q  157 aaatcacccctcttcatctttttc-tctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||| ||||||| |||||  ||| || |||||| ||||||| ||||||| ||||||||| |||| ||||||||| | ||||||||||||    
T  37566057 aaatcacccttcttcattttttttatctctatttcaatctaaataattgatttt-cacatagatttaggtttttttctttgagatttcatcatc 37565965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 18733938 - 18734015
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag-gttttttcttcgtgatttcatc 245  Q
    ||||||||||||||||| || |||||| ||||||| |||||||  | |||||||| |  ||||||||||||||| |||||    
T  18733938 tcttcatctttttctctctatttcaatttaaataattgatttt--aaatagatctggttttttttcttcgtgatatcatc 18734015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 23425548 - 23425459
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcat 247  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  23425548 aaatcacccctcttcatctttttctctatatttcaatctaaataagtgattttt-acatagatctaggttttttctttgtgatttcatcat 23425459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 31235969 - 31235878
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||| ||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||    
T  31235969 aaatctcccctcttcatctttttctctctatttcaatctaaataagtgatttttcacatagatctaggttttctctacgtgatttcgtcatc 31235878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 48207802 - 48207892
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  48207802 aaatcacccctcttcatctttttctcaatatttcaatctaaataagtga-ttttcacatagatctatgttttttctttgtgatttcatcatc 48207892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 151 - 248
Target Start/End: Complemental strand, 35667414 - 35667318
Alignment:
Q  151 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||| ||||||| ||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  35667414 gacttaaaatcacccttcttcatatttttctctctatttcaatctaaataagtga-ttttcacatagatctaggttttttctttttgatttcatcatc 35667318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 20116483 - 20116572
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcat 247  Q
    ||||||||| ||||||||||||||| | || |||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  20116483 aaatcacccttcttcatctttttctatctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcat 20116572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 1485435 - 1485343
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||| ||||||||||||||||| || |||||| |||||||||||  |||||||||||||||| ||||||||| ||||||||||||||    
T  1485435 taaaatcacccgtcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctagattttttctttgtgatttcatcatc 1485343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 242
Target Start/End: Original strand, 36143776 - 36143850
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttc 242  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  36143776 tcttcatctttttctctctaattcaatctaaataagtg-tttttcacgtagatctaggttttttcttcgtgatttc 36143850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 45199208 - 45199118
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||| |||||||||||||||||||| || ||| ||||||||||| |||||| ||||||||| |||||||||| ||||||||||||||    
T  45199208 aaatcacccatcttcatctttttctctatattttaatttaaataagtga-ttttcatatagatctaagttttttctttgtgatttcatcatc 45199118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 26492265 - 26492356
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag-gttttttcttcgtgatttcatcatc 248  Q
    |||| |||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||  ||||||||| ||||||||||||||    
T  26492265 aaataacccctcttcatctttttctctctatttcaatttaaataagtga-ttttcacatagatctagttttttttctttgtgatttcatcatc 26492356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 2843400 - 2843315
Alignment:
Q  161 cacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||||||||| || || |||||||||||    
T  2843400 cacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt-tttgtaatttcatcatc 2843315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 6001921 - 6002012
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||| ||||||||||||||||  || || ||| ||||||||||||||||||||||||| |||||||| ||| ||||||||| |||||    
T  6001921 aaatcacccatcttcatctttttctccctattttaatctaaataagtgatttttcacatagatttaggttttctctacgtgatttcgtcatc 6002012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 35496354 - 35496261
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||  ||||||||||||||||| || |||||| ||| ||||||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  35496354 taaaatcaccaatcttcatctttttctctctatttcaatctaattaagtga-ttttcacatagatctaggtttttttctttgtgatttcatcatc 35496261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 46821914 - 46822006
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag--gttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||   ||||||||| || |||||||||||    
T  46821914 aaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctagattttttttctttgtaatttcatcatc 46822006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 26583614 - 26583705
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||| ||| || |||||| ||||||||||| |||||| ||| ||||||| ||||||||| ||||||||||||||    
T  26583614 aaatcacccctcttcatctttttatctctatttcaatctaaataagtga-ttttcatatatatctaggtttttttctttgtgatttcatcatc 26583705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 21266292 - 21266381
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||| |||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||  |||||||  |||||||||||||    
T  21266292 aaatcacctctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctagg-gttttctttttgatttcatcatc 21266381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 42067237 - 42067147
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||| ||||||||||| || |||||| |||||| ||||||||||| ||||||||||||| ||| |||||||||  |||||||||||||    
T  42067237 aaatcacctctcttcatcttgttatctatatttcaatctaaataagtga-ttttcacatagatatagattttttctttctgatttcatcatc 42067147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 42311180 - 42311270
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcat 247  Q
    |||||| ||||||||||| |||||||| || |||||| ||||||||||| | |||||||||||||||| ||||||||| |||||||||||||    
T  42311180 aaatcatccctcttcatcattttctctctatttcaatctaaataagtga-tattcacatagatctaggtttttttctttgtgatttcatcat 42311270  T

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Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 3860847 - 3860938
Alignment:
Q  152 acttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatc 245  Q
    |||| |||||||  ||||| |||||||||||| |  |||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  3860847 acttgaaatcacatctctttatctttttctctttgtttcaatataaataagtga-ttttcacatagatcttgg-tttttcttcgtgatttcatc 3860938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 1448995 - 1448916
Alignment:
Q  168 cttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||| ||||||| || |||||| ||||||||||||||| ||||||||||||| |||||| || ||||||||||||||    
T  1448995 cttcatctctttctctctatttcaatctaaataagtgatttt-cacatagatctagattttttatttgtgatttcatcatc 1448916  T

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Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 22928047 - 22927956
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag-gttttttcttcgtgatttcatcatc 248  Q
    ||||||||||| ||||||||||||||| || |||||| |||||||||||  ||||||| ||||||||  ||||||||| ||||||||||||||    
T  22928047 aaatcaccccttttcatctttttctctctatttcaatctaaataagtga-ctttcacacagatctagttttttttctttgtgatttcatcatc 22927956  T

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Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 42408262 - 42408352
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcat 247  Q
    |||||| || ||||||||||||||||| || |||||| ||||||| || |||||||||| |||||||| ||||||||| |||||||||||||    
T  42408262 aaatcatccatcttcatctttttctctttatttcaatctaaataattg-tttttcacatggatctaggtttttttctttgtgatttcatcat 42408352  T

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Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 46338960 - 46339025
Alignment:
Q  164 ccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    |||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||| ||||||    
T  46338960 ccctcttcatctttttctctttatttcaatgtaaataagtga-ttttcacatagatctagctttttt 46339025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 433869 - 433778
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag-gttttttcttcgtgatttcatcatc 248  Q
    |||||| |||| ||||||||||||||| || |||||| ||||||| |||  ||||||||||||||||  ||||||||| ||||||||||||||    
T  433869 aaatcatcccttttcatctttttctctctatttcaatctaaataaatga-ctttcacatagatctagatttttttctttgtgatttcatcatc 433778  T

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Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 14628048 - 14627965
Alignment:
Q  165 cctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| || |||| ||||||| | ||||||||||||||    
T  14628048 cctcttcatctttttttctctaattcaatctaaataagtga-ttttcacataaatataggtttttttccttgtgatttcatcatc 14627965  T

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Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 17223136 - 17223085
Alignment:
Q  196 aaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  17223136 aaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatc 17223085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 23085414 - 23085512
Alignment:
Q  151 gacttaaaatcacccc-tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||| |||||||||| ||||||||||||||| | || |||||| ||||||| |||  ||||||||||||||||| ||||||||| ||||||| ||||||    
T  23085414 gacttgaaatcaccccctcttcatctttttctttctatttcaatctaaataattga-ctttcacatagatctaggtttttttctttgtgattttatcatc 23085512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 32684595 - 32684656
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttt 229  Q
    |||||||| |||||||| || |||||| ||||||||||| |||||||||||||||||||||||    
T  32684595 tcttcatcgttttctctctatttcaatctaaataagtga-ttttcacatagatctaggttttt 32684656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 46818577 - 46818499
Alignment:
Q  173 tctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccga 251  Q
    ||||||||||| |   ||||| |||||||||||||||||||||| || | |||||||||||| ||||||| ||||||||    
T  46818577 tctttttctctctcgctcaatctaaataagtgatttttcacataaattttggttttttcttcatgatttcgtcatccga 46818499  T

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Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 1100932 - 1100856
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatc 245  Q
    ||||||||||||||||| || |||||| | || |||||||||||  |||| ||||| ||||||||||||||||||||||    
T  1100932 tcttcatctttttctctctatttcaattttaacaagtgattttt-gcatatatcta-gttttttcttcgtgatttcatc 1100856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 32522108 - 32522019
Alignment:
Q  157 aaatcacccctcttcatcttttt-----ctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttc 242  Q
    ||||||||| |||||||||||||     |||| || |||||| ||||||||||||||| ||||||||| || ||||||||||||| |||||    
T  32522108 aaatcacccatcttcatcttttttttctctctctatttcaatttaaataagtgatttt-cacatagatttatgttttttcttcgttatttc 32522019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 43369904 - 43369858
Alignment:
Q  195 taaataagtgatttttcacatagatctaggttttttcttcgtgatttc 242  Q
    ||||||||||||||| ||||||||| || |||||||||||||||||||    
T  43369904 taaataagtgatttt-cacatagatataagttttttcttcgtgatttc 43369858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 1097770 - 1097698
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag-gttttttcttcgtgat 239  Q
    ||||||||||||| | | || |||||| |||||||||| ||||| ||||||||||||  |||||||||||||||    
T  1097770 tcttcatctttttttatctatttcaatttaaataagtg-ttttttacatagatctagttttttttcttcgtgat 1097698  T

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Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 17499786 - 17499745
Alignment:
Q  207 ttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||| |||||||||||||||| | ||||||||||||||    
T  17499786 ttttcacaaagatctaggttttttcattgtgatttcatcatc 17499745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 17553428 - 17553469
Alignment:
Q  207 ttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||| |||||||||||||||| | ||||||||||||||    
T  17553428 ttttcacaaagatctaggttttttcattgtgatttcatcatc 17553469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 7740559 - 7740626
Alignment:
Q  176 ttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcat 244  Q
    |||| |||||| |||||| ||||||| | ||||| ||||||||| ||| ||||||||| ||||||||||    
T  7740559 ttttttctatatttcaatttaaataaattatttt-cacatagatttagattttttctttgtgatttcat 7740626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 17611075 - 17611119
Alignment:
Q  207 ttttcacatagatctaggttttttcttcgtgatttcatcatccga 251  Q
    |||||||||| | |||| |||||||||||||||||| ||||||||    
T  17611075 ttttcacataaaactagattttttcttcgtgatttcgtcatccga 17611119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 46178474 - 46178568
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccga 251  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| || |||||    
T  46178474 aaatcatccctcttcatctttttctctctaattcaatctaaataagtgctttttcacatagatctaggttttttcttcgtgatttcgtcttccga 46178568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 37169128 - 37169222
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccga 251  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||    
T  37169128 aaatcacctctcttcacctttttctctctaattcaatataaataagtgatttttcacatagatctagattttttcttcttgatttcgtcacccga 37169222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 50611596 - 50611503
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||| ||||||||||| ||||||||| ||||||||||||||    
T  50611596 taaaatcacccctcttcatctttttctctatatttcaatctaaataagtga-ttttcatatagatctaggtttttttctttgtgatttcatcatc 50611503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 29503360 - 29503450
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||| ||||||| |||||||||||| |||||| ||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  29503360 aaatcacccatcttcatatttttctctatatttcaatctaaataattgatttt-cacatagatctaggttttttctttgtgatttcatcatc 29503450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 39917573 - 39917483
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||| || ||||||| ||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  39917573 aaatcatccatcttcatatttttctctctaattcaatctaaataagtgatttt-cacatagatctaggttttttccttgtgatttcatcatc 39917483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 46934540 - 46934630
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||| ||||| || |||||| ||||||||||| |||||||||||||| ||||||||||||  |||||||||||||    
T  46934540 aaatcacccctcttcatctttctctctctatttcaatctaaataagtga-ttttcacatagatccaggttttttcttgttgatttcatcatc 46934630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 4172462 - 4172555
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    |||||||| || ||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  4172462 taaaatcatccatcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatctaggtttttttctttgtgatttcatcatc 4172555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 25162334 - 25162424
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||| ||||||||||||||||| || |||||| |||||||||||  ||||||||||||||||| ||||||||| ||||||||||||||    
T  25162334 aaatcacccatcttcatctttttctctctatttcaatctaaataagtga--tttcacatagatctaggtttttttctttgtgatttcatcatc 25162424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 25631706 - 25631612
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    |||||||| |||||| ||||||||||||| || |||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||||||||||    
T  25631706 taaaatcatccctctccatctttttctctctatttcaatctaaataagtga-ttttcacatagatctaggttttttttctttgtgatttcatcatc 25631612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 36906019 - 36906110
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||| ||||||||||||||||| || |||||||||||||||||| ||||||||||||| |||| ||||||||| || |||||||||||    
T  36906019 aaatcacccttcttcatctttttctctttatttcaatataaataagtga-ttttcacatagatttaggtttttttctttgtaatttcatcatc 36906110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 22802919 - 22802990
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttt 228  Q
    ||||||| ||||||||||||||||||| || |||||| ||||||||||||||||||| ||||||||||||||    
T  22802919 aaatcactcctcttcatctttttctctctatttcaatctaaataagtgatttttcacgtagatctaggtttt 22802990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 38440754 - 38440668
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcat 244  Q
    ||||||| |||||| |||||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||||  |||||||||    
T  38440754 aaatcactcctctttatctttttctctctatttcaatctaaataagtga-ttttcacatagatctaggttttttctttttgatttcat 38440668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 248
Target Start/End: Complemental strand, 38855215 - 38855122
Alignment:
Q  156 aaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag--gttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||||||||||||||| ||  ||||| ||||||||||| |||||||||||||||||   ||||||||| ||||||||||||||    
T  38855215 aaaatcacccctcttcatctttttctctctatatcaatctaaataagtga-ttttcacatagatctagattttttttctttgtgatttcatcatc 38855122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 44907576 - 44907484
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||| || |||||| |||| |||||| ||||||||||||||||||  ||||||||| || |||||||||||    
T  44907576 aaatcacccctcttcatctttttctctttatttcaatctaaacaagtga-ttttcacatagatctaggttttttttctttgtaatttcatcatc 44907484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 3850632 - 3850560
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||||  |||||||||||||||||||||||    
T  3850632 aaatcacccctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggtttttt 3850560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 35499372 - 35499306
Alignment:
Q  163 cccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  35499372 cccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 35499306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 49552400 - 49552310
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||||| |||| ||| || |||||| ||||||||||| ||| |||||  |||||||||||||||| ||||||||||||||    
T  49552400 aaatcacccctcttcatcattttttctctatttcaatctaaataagtgaattt-cacattaatctaggttttttctttgtgatttcatcatc 49552310  T

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Target: chr3; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 4178460 - 4178553
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag-gttttttcttcgtgatttcatcatc 248  Q
    ||||||||||| ||||||||||||||||| || |||||| ||||||||||| |||||| ||| ||||||  ||||||||| ||||||||||||||    
T  4178460 taaaatcacccatcttcatctttttctctctatttcaatctaaataagtga-ttttcagataaatctagctttttttctttgtgatttcatcatc 4178553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 14464405 - 14464495
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc---gtgatttcatc 245  Q
    ||||||||||| ||||||||||||||| || |||||| ||||||||||||||| |||||||||||| ||||||| |||   |||||||||||    
T  14464405 aaatcacccctattcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctaagtttttttttctttgtgatttcatc 14464495  T

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Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 32607370 - 32607457
Alignment:
Q  162 acccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||| |||||||| || |||||| ||||||||||| ||||||||||||||||||  ||||||||| || |||||||||||    
T  32607370 acccctcttcatcattttctctttatttcaatctaaataagtga-ttttcacatagatctaggttttttttctttgtaatttcatcatc 32607457  T

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Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 2342390 - 2342480
Alignment:
Q  158 aatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatcta-ggttttttcttcgtgatttcatcatc 248  Q
    ||||| |||||||||||||||||||| || |||||| ||||||||||| |||||||||| |||||   ||||||||| ||||||||||||||    
T  2342390 aatcaaccctcttcatctttttctctctatttcaatctaaataagtga-ttttcacatatatctatatttttttctttgtgatttcatcatc 2342480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 47980809 - 47980750
Alignment:
Q  188 ttcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcat 247  Q
    |||||| |||||||||||||||||||||| |||||||| |||| ||||||||||| ||||    
T  47980809 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcat 47980750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 47990096 - 47990037
Alignment:
Q  188 ttcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcat 247  Q
    |||||| |||||||||||||||||||||| |||||||| |||| ||||||||||| ||||    
T  47990096 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcat 47990037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 47999383 - 47999324
Alignment:
Q  188 ttcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcat 247  Q
    |||||| |||||||||||||||||||||| |||||||| |||| ||||||||||| ||||    
T  47999383 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcat 47999324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 48008670 - 48008611
Alignment:
Q  188 ttcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcat 247  Q
    |||||| |||||||||||||||||||||| |||||||| |||| ||||||||||| ||||    
T  48008670 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcat 48008611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 17237710 - 17237793
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg---ttttttcttcgtgatttcatcatc 248  Q
    ||||||||| ||||||| || |||||| ||||||||||| ||||||||||||| ||||   ||||||||| ||||||||||||||    
T  17237710 tcttcatctgtttctctctatttcaatctaaataagtga-ttttcacatagatttaggtttttttttctttgtgatttcatcatc 17237793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 36735329 - 36735267
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagat 219  Q
    |||||| |||||||||| ||| |||||||| |||||| ||||||||||||||||| |||||||    
T  36735329 aaatcatccctcttcatttttctctctatatttcaatttaaataagtgatttttctcatagat 36735267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 12115991 - 12116063
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    |||||| | ||||||||||||| |||| || |||||| ||||||||||| |||||||| |||||||||||||||    
T  12115991 aaatcatctctcttcatcttttcctctttatttcaatctaaataagtga-ttttcacaaagatctaggtttttt 12116063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 6913321 - 6913249
Alignment:
Q  159 atcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttct 232  Q
    ||||||||| ||||||| |||||||||  |||||| || ||| |||||||| |||||||||| |||||||||||    
T  6913321 atcaccccttttcatctctttctctatgtttcaatctagataggtgatttt-cacatagatcgaggttttttct 6913249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 54378816 - 54378881
Alignment:
Q  175 tttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgattt 241  Q
    |||||||||  | |||||| ||||| ||||||||||||| ||||||||  |||||||||||||||||    
T  54378816 tttttctctccatttcaatctaaatgagtgatttttcacgtagatcta-attttttcttcgtgattt 54378881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 30829921 - 30829962
Alignment:
Q  207 ttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||| ||||||||||||||| |||| ||||||||||||||||    
T  30829921 ttttgacatagatctaggttgtttcatcgtgatttcatcatc 30829962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 42719418 - 42719489
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttt 229  Q
    ||||||| | ||||| | ||||||||| || |||||| ||||||||||| ||||||  |||||||||||||||    
T  42719418 aaatcactcatcttcgtatttttctctctatttcaatttaaataagtga-ttttcatgtagatctaggttttt 42719489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 8e-30; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 35965152 - 35965058
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccga 251  Q
    |||||||| |||||||||||||||||| || |||||| | |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  35965152 aaatcacctctcttcatctttttctctctatttcaatctgaataagtgatttttcacatagatctaggtttttttttcgtgatttcgtcatccga 35965058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 21090065 - 21090155
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||| | ||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  21090065 aaatcactcatcttcatctttttctctctatttcaatataaataagtgatttt-cacatagatttaggttttttcttcgtgatttcatcatc 21090155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 34024613 - 34024523
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||| | |||||||||||||||||||||||||||  |||||||||||||    
T  34024613 aaatcacccctcttcatctttttctctctatttcaatctaaataagtta-ttttcacatagatctaggttttttctttttgatttcatcatc 34024523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 12265367 - 12265451
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgattt 241  Q
    ||||||||||||||||||||||| ||  || |||||| |||||||||||||||||||||||||||||||||| ||| ||||||||    
T  12265367 aaatcacccctcttcatctttttatccctatttcaatctaaataagtgatttttcacatagatctaggttttctctacgtgattt 12265451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 51317898 - 51317988
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||| | ||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  51317898 aaatcactcatcttcatctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatc 51317988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 38706889 - 38706796
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||| ||||||||||||||||| || |||||| ||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||    
T  38706889 taaaatcacccttcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatttaggtttttttctttgtgatttcatcatc 38706796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 18139089 - 18139005
Alignment:
Q  158 aatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttc 242  Q
    |||||| |||||||||| |||||||| || |||||| |||||||||||||||||||||| ||||||||||||||||  |||||||    
T  18139089 aatcacacctcttcatcattttctctctatttcaatctaaataagtgatttttcacatacatctaggttttttcttaatgatttc 18139005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 49126302 - 49126218
Alignment:
Q  158 aatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttc 242  Q
    |||||| |||||||||| |||||||| || |||||| |||||||||||||||||||||| ||||||||||||||||  |||||||    
T  49126302 aatcacacctcttcatcattttctctctatttcaatctaaataagtgatttttcacatacatctaggttttttcttaatgatttc 49126218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 10359723 - 10359633
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||  |||||||||||||||| || ||| || |||||||||||||||  ||||| |||||||||||||||||||||||||||||||    
T  10359723 aaatcacccaacttcatctttttctctctatttcgatctaaataagtgatttta-acatatatctaggttttttcttcgtgatttcatcatc 10359633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 31381848 - 31381758
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||||  |||||||||||||| |  |||||| ||||||||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  31381848 aaatcaccccttctcatctttttctctctttttcaatttaaataagtgatttt-cacatagatctaagttttttctttgtgatttcatcatc 31381758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 47416790 - 47416868
Alignment:
Q  151 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||| ||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||| |||||||    
T  47416790 gacttgaaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaagtttttt 47416868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 37188769 - 37188681
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcat 247  Q
    ||||||| | |||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||| |||||||||| |||||||||||||    
T  37188769 aaatcactcatcttcatctttttctctatatttcaatctaaataagtga-ttttcacatatatcta-gttttttctttgtgatttcatcat 37188681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 8009526 - 8009447
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||| || |||||| ||||||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  8009526 tcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatcta-gttttttctttgtgatttcatcatc 8009447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 9283823 - 9283895
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    |||||||||||||||||| |||||||| || |||||| |||||||||||||||| |||||||||||||||||||    
T  9283823 aaatcacccctcttcatcgttttctctttatttcaatctaaataagtgattttt-acatagatctaggtttttt 9283895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 43444305 - 43444396
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||| ||||||||||||||||| || |||||| ||||||||||| |||||||||| ||||||| ||||||||| || |||||||||||    
T  43444305 aaatcacccatcttcatctttttctctttatttcaatctaaataagtga-ttttcacatatatctaggtttttttctttgtaatttcatcatc 43444396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 10389930 - 10389840
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||| | ||||||||||||||||| || |||||| ||||||||||| ||| ||||||||||||||||||||| |  |||||||||||||    
T  10389930 aaatcactcatcttcatctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggttttttccttttgatttcatcatc 10389840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 43154203 - 43154126
Alignment:
Q  151 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||| |||||||||||||||||||||| |||| || |||||| ||||||||||||||| ||||||||||||||||||||    
T  43154203 gacttgaaatcacccctcttcatctttt-ctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttt 43154126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 9529055 - 9528963
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||| |||||||||||| || |||||| ||||||||||| ||||||||||||| || |  ||||||||| ||||||||||||||    
T  9529055 aaatcacccctctttatctttttctctttatttcaatctaaataagtga-ttttcacatagatttatgttttttttctttgtgatttcatcatc 9528963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 9645724 - 9645635
Alignment:
Q  159 atcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||| ||| || |||||| |||||||||||  ||||||||||||||||| ||||||||| | ||||||||||||    
T  9645724 atcacccctcttcatctttttgtctctatttcaatctaaataagtga-ctttcacatagatctaggtttttttctttgcgatttcatcatc 9645635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 35261109 - 35261194
Alignment:
Q  163 cccctcttcatctttttc-tctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||||| ||| || | |||| ||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  35261109 cccctcttcatctttttcctctttattgcaatctaaataagtgatttt-cacatagatttaggttttttcttcgtgatttgatcatc 35261194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 53616828 - 53616736
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    |||||||| ||||||||| |||||||| || |||||| ||||||||||| ||||||||||||||||||  ||||||||| || |||||||||||    
T  53616828 aaatcaccactcttcatcgttttctctttatttcaatctaaataagtga-ttttcacatagatctaggttttttttctttgtaatttcatcatc 53616736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 4643776 - 4643861
Alignment:
Q  163 cccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag--gttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||| || |||||| |||||||||||  ||||||||||||||||   ||||||||| ||||||||||||||    
T  4643776 cccctcttcatctttttctctctatttcaatctaaataagtga--tttcacatagatctagattttttttctttgtgatttcatcatc 4643861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 20569164 - 20569236
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||||||||| ||||||||| || |||||| ||||||| ||| ||||||||||||||||||||||||    
T  20569164 aaatcacccctcttcatttttttctctttatttcaatctaaataaatga-ttttcacatagatctaggtttttt 20569236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 35351337 - 35351250
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatc 245  Q
    ||||||| | |||||||| ||||| || || |||||| |||||||||||| || |||||||||||||||||||||| ||||||||||||    
T  35351337 aaatcacacatcttcatccttttcgctttatttcaatttaaataagtgatatt-cacatagatctaggttttttctacgtgatttcatc 35351250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 50766686 - 50766595
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatct-aggttttttcttcgtgatttcatcatc 248  Q
    |||||| |||||||||||||||||||| || |||||| ||||||| ||| ||||||||||||||| || ||||||||| || |||||||||||    
T  50766686 aaatcatccctcttcatctttttctctttatttcaatctaaataaatga-ttttcacatagatctaagtttttttctttgtaatttcatcatc 50766595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 56194519 - 56194604
Alignment:
Q  165 cctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg---ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||| || |||||| |||||||||||  |||||||||||||||||   ||||||||| ||||||||||||||    
T  56194519 cctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggtttttttttctttgtgatttcatcatc 56194604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 1531818 - 1531911
Alignment:
Q  157 aaatcacccctcttcatctttt-tctctataattcaatataaataagtgatttttcacatagatctag--gttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||| ||||||| ||||| || |||||| ||||||||||||||| |||||||||||||   ||||||||| ||||||||||||||    
T  1531818 aaatcacccctctttatcttttctctctctatttcaatctaaataagtgatttt-cacatagatctagattttttttctttgtgatttcatcatc 1531911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 32952913 - 32952834
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||| || |||||  |||||||||| ||||||||||||||||| |||||||||| |||||||| |||||    
T  32952913 tcttcatctttttctctctatttcaaattaaataagtg-tttttcacatagatcta-gttttttctttgtgatttcgtcatc 32952834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 2115755 - 2115673
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||| || |||||| ||||||||||| ||||||||||||| ||||  ||||||||| || |||||||||||    
T  2115755 tcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatttaggttttttttctttgtaatttcatcatc 2115673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 5333636 - 5333581
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttca 212  Q
    ||||||| | ||||||||||||||||| || |||||||||||||||||||||||||    
T  5333636 aaatcacacatcttcatctttttctctctatttcaatataaataagtgatttttca 5333581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 25273787 - 25273886
Alignment:
Q  157 aaatcacccctcttcatctt-----tttctctataattcaatataaataagtgatttttcacatagatctagg----ttttttcttcgtgatttcatcat 247  Q
    ||||||||||||||||||||     ||||||| || |||||| ||||||||||||||| ||||||||||||||    ||||||||| |||||||||||||    
T  25273787 aaatcacccctcttcatcttcatcttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttttttctttgtgatttcatcat 25273885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 5333701 - 5333655
Alignment:
Q  164 ccctcttcatctttttctctataattcaatataaataagtgattttt 210  Q
    |||||||||||||||||||| || |||||||||||||||||||||||    
T  5333701 ccctcttcatctttttctctctatttcaatataaataagtgattttt 5333655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 6972721 - 6972813
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    |||||||| |||||||||||||| ||| || |||||| ||||||||||| |||| ||||||||| | |  ||||||||| ||||||||||||||    
T  6972721 aaatcacctctcttcatctttttatctgtatttcaatctaaataagtgactttt-acatagatccatgttttttttctttgtgatttcatcatc 6972813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 49680456 - 49680521
Alignment:
Q  164 ccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    |||||||||||||||||||| || ||||||  |||||||||| ||||||||| ||||||||||||||    
T  49680456 ccctcttcatctttttctctttatttcaatccaaataagtga-ttttcacatggatctaggtttttt 49680521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 1008201 - 1008289
Alignment:
Q  151 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatt 240  Q
    ||||| ||||||| | ||| ||||||||||||| || || ||| ||||||||||| |||||||||| || ||| ||||||||||||||||    
T  1008201 gacttgaaatcactcatctgcatctttttctctctattttaatctaaataagtga-ttttcacataaatttagtttttttcttcgtgatt 1008289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 2624441 - 2624500
Alignment:
Q  188 ttcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcat 247  Q
    |||||| ||||||||||||||| |||||||||||||| |||||||||||||||||| ||||    
T  2624441 ttcaatctaaataagtgatttt-cacatagatctaggtttttttcttcgtgatttcgtcat 2624500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 29965565 - 29965638
Alignment:
Q  176 ttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    |||||||| || |||||| ||||||||||||||| ||||||||||||||  ||||||||| || |||||||||||    
T  29965565 ttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatc 29965638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 52098084 - 52098002
Alignment:
Q  169 ttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccga 251  Q
    |||||| |||||||  || |||||| ||||||||||||||||| |||||| |||  |||| ||||||||||||  ||||||||    
T  52098084 ttcatccttttctccctatttcaatctaaataagtgatttttcgcatagaactaaattttctcttcgtgattttgtcatccga 52098002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 27594008 - 27593952
Alignment:
Q  164 ccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatct 221  Q
    ||||||||||||||||||||||| |||||| |||||||| ||  ||||||||||||||    
T  27594008 ccctcttcatctttttctctatatttcaatctaaataagcga-gtttcacatagatct 27593952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 868069 - 868165
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaa-------tataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||| || |||||       | ||||||||| ||||| |||||||||||| | |||||||| ||||||||||||||    
T  868069 aaatcacccctcttcatctttttctctctatttcaaatttcaatctaaataagttatttt-cacatagatcta-gatttttctttgtgatttcatcatc 868165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 14183729 - 14183806
Alignment:
Q  171 catctttttctctataattcaatataaataagtgatttttcacatagatct-aggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||| || |||||| ||||||||||| ||||||||  ||||| || ||||||||| ||||||||| ||||    
T  14183729 catctttttctctctatttcaatctaaataagtga-ttttcacaaggatctaagtttttttctttgtgatttcaccatc 14183806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 1931843 - 1931802
Alignment:
Q  207 ttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||| |||||||||||||||| | ||||||||||||||    
T  1931843 ttttcacaaagatctaggttttttcattgtgatttcatcatc 1931802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 23100617 - 23100673
Alignment:
Q  175 tttttctctataattcaatataaataagtga-tttttcacatagatctaggtttttt 230  Q
    ||||||||| ||||||||| ||||||||||| ||||| |||||||| || |||||||    
T  23100617 tttttctctctaattcaatctaaataagtgatttttttacatagatttatgtttttt 23100673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 15570806 - 15570906
Alignment:
Q  151 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccg 250  Q
    ||||| |||||| |||||||||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||||| |||||||| ||| |||    
T  15570806 gacttgaaatcatccctcttcatctttttctctataattcaatctaaatatttgatttttcacatagatgtaggttttttctttgtgatttcgtcacccg 15570905  T
Q  251 a 251  Q
    |    
T  15570906 a 15570906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 21060458 - 21060368
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||    
T  21060458 aaatcaccactcttcatctttttctctatatttcaatctaaataagtga-ttttcacatagatgtaggttttttcttcgtgatgtcatcatc 21060368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 781292 - 781382
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||||||| |||||| ||||||||||| |||||||| ||||||||||||||    
T  781292 aaatcacccatcttcatctttttctctatatttcaatctaaataagtga-ttttcagatagatctagggtttttctttgtgatttcatcatc 781382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 2058017 - 2057924
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||| |||||||||  |||||||||||||    
T  2058017 taaaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttttctttatgatttcatcatc 2057924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 28235488 - 28235578
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||| | || ||| || ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  28235488 aaatcacccctcttcatctttttctttctatttcgatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatc 28235578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 6445834 - 6445923
Alignment:
Q  152 acttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttc 242  Q
    |||||||||||||| |||||||| |||||||| ||  | ||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  6445834 acttaaaatcacccatcttcatcgttttctctctatcttaatttaaataagtgattttt-acatagatctaggttttttcttcgtgatttc 6445923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 27267037 - 27266945
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||| ||||||||| || |||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||||||||||    
T  27267037 aaatcacccctcttcatatttttctctctatttcaatctaaataagtga-ttttcacatagatctaggttttttttctttgtgatttcatcatc 27266945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 30371627 - 30371719
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||  ||||||||| || |||||||||||    
T  30371627 aaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggttttttttctttgtaatttcatcatc 30371719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 35475513 - 35475424
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcat 247  Q
    |||||||| ||||||||||| || |||||| |||||| ||||||||||||||| ||||||||||||| ||||||||| |||||||||||||    
T  35475513 aaatcacctctcttcatcttgttatctatatttcaatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcat 35475424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 36344668 - 36344583
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgattt 241  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||| | ||||||||| |||||| |||||||||| |||||||    
T  36344668 taaaatcacccctcttcatctttttctctatatttcaatctaaataagtta-ttttcacatggatctaagttttttctttgtgattt 36344583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 10649356 - 10649428
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  10649356 aaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 10649428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 248
Target Start/End: Original strand, 7241689 - 7241776
Alignment:
Q  161 cacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||| || |||||| |||||||||||  ||||||||||||||||| ||||||||| ||||||||||||||    
T  7241689 cacccctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggtttttttctttgtgatttcatcatc 7241776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 248
Target Start/End: Original strand, 7246865 - 7246952
Alignment:
Q  161 cacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||| || |||||| |||||||||||  ||||||||||||||||| ||||||||| ||||||||||||||    
T  7246865 cacccctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggtttttttctttgtgatttcatcatc 7246952  T

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Target: chr5; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 16981193 - 16981283
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||| ||||||||| ||||||||| || |||||| ||||||||||| ||| |||||| |||||||||||||||| ||||||||||||||    
T  16981193 aaatcactcctcttcatatttttctctctatttcaatctaaataagtga-tttacacatatatctaggttttttctttgtgatttcatcatc 16981283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 19281121 - 19281031
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||| ||||||||||||||||| || |||||| |||||||||||  ||||||| | |||||||||||||||| ||||||||||||||    
T  19281121 aaatcacccatcttcatctttttctctctatttcaatctaaataagtga-ctttcacacatatctaggttttttctttgtgatttcatcatc 19281031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 27751853 - 27751919
Alignment:
Q  181 tctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  27751853 tctatatttcaatataaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatc 27751919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 18677643 - 18677551
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    |||||| |||||||||||||||||||| || || ||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||||||||||    
T  18677643 aaatcatccctcttcatctttttctctctattttaatctaaataagtga-ttttcacatagatctaggttttttttctttgtgatttcatcatc 18677551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 7150512 - 7150421
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatct-aggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||||  |||||||||||||| || ||||||||| ||| ||||||||||    
T  7150512 aaatcacccctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctaagtttttttctttgtgctttcatcatc 7150421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 30298130 - 30298201
Alignment:
Q  176 ttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  30298130 ttttctctatatttcaatctaaataagtgatttt-cacatagatctaggttttttctttatgatttcatcatc 30298201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 11767720 - 11767793
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatcta-ggttttttcttcgtgat 239  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||||| || | |||||||||||||||    
T  11767720 tcttcatctttttctctatatttcaatctaaataagtgatttttcacgtagatatatgtttttttcttcgtgat 11767793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 26578152 - 26578224
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||| | ||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  26578152 aaatcactcatcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 26578224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 43261994 - 43261924
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttt 228  Q
    ||||||||| ||||||||||||| ||| || |||||| ||||||||||| ||||||||||||||||||||||    
T  43261994 aaatcacccatcttcatctttttatctctatttcaatctaaataagtga-ttttcacatagatctaggtttt 43261924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 19259974 - 19259897
Alignment:
Q  173 tctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||| || |||||| |||||||||||||||||||||||||||| |  ||||||||  ||||||||||||||    
T  19259974 tctttttctctctatttcaatctaaataagtgatttttcacatagatctaagttttttttctctgtgatttcatcatc 19259897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 27576516 - 27576437
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcat 247  Q
    |||||||| |||||||| || |||||| |||||||||||| || ||||||||||||| ||||||||| |||||||| ||||    
T  27576516 tcttcatccttttctctctatttcaatgtaaataagtgatatt-cacatagatctagattttttctttgtgatttcgtcat 27576437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 34881613 - 34881687
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttctt 233  Q
    |||||||| ||||||||||||| |||| || |||||| ||||||||||||||| ||||||||||||| |||||||||    
T  34881613 aaatcacctctcttcatctttt-ctctctatttcaatctaaataagtgatttt-cacatagatctagtttttttctt 34881687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 7887114 - 7887024
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||| |||||||| |||||| |||| || || ||| ||||||||||||||| |||||| ||||| ||||||||||  |||||||||||||    
T  7887114 aaatcatccctcttcgtcttttcctctctattttaatctaaataagtgatttt-cacataaatctatgttttttctttttgatttcatcatc 7887024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 20257855 - 20257799
Alignment:
Q  173 tctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  20257855 tctttttctctctatttcaatctaaataagtga-ttttcacatagatctaggtttttt 20257799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 42886392 - 42886471
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||| |||||||| || ||||||  ||||||||| |||| ||||||||| |||||||| |||||||||||||||||||    
T  42886392 tcttcatccttttctctctatttcaatcaaaataagtgctttt-cacatagatttaggtttt-tcttcgtgatttcatcatc 42886471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 42432802 - 42432887
Alignment:
Q  156 aaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttc 242  Q
    ||||||||| ||||| || ||||||||| || |||||| |||| |||||| ||| || |||||| ||||||||||||| ||||||||    
T  42432802 aaaatcacctctctttatatttttctctctatttcaatctaaaaaagtgaattt-catatagatttaggttttttctttgtgatttc 42432887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 35631868 - 35631791
Alignment:
Q  157 aaatcacccctcttca--tctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc 234  Q
    ||||||||| ||||||  |||||||| ||||| |||||| |||||||||||||||| ||||| ||||| |||||||||||    
T  35631868 aaatcacccatcttcaactctttttc-ctatatttcaatctaaataagtgattttt-acatatatctaagttttttcttc 35631791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 42432254 - 42432169
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatc 245  Q
    |||||||| |||||||| ||||||||| |  ||||||  ||| ||||||||| |   |||||||||||||||||||| || ||||||||    
T  42432254 aaatcacctctcttcatatttttctctctttttcaattaaaaaaagtgatttat---atagatctaggttttttctttgtaatttcatc 42432169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 14211105 - 14211187
Alignment:
Q  158 aatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttc 242  Q
    |||||||||||| |||||||||| || |  |||||| ||||||||||| |||||||||| ||| | ||||||  |||||||||||    
T  14211105 aatcacccctctgcatctttttccctttctttcaatctaaataagtga-ttttcacatacatc-aagtttttatttcgtgatttc 14211187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 5e-28; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 27477059 - 27477149
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||    
T  27477059 aaatcacccctcttcatctttttctctatatttcaatctaaataagt-aattttcacatagatctagattttttctttgtgatttcatcatc 27477149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 32913146 - 32913236
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||| ||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  32913146 aaatcacccctcttgatccttttctctatatttcaatttaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatc 32913236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 4192745 - 4192833
Alignment:
Q  159 atcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||| || ||||||||||||| ||||||||||||||    
T  4192745 atcacccctcttcatctttttctctatatttcaatctaaataagtga-ttttcacatatatttaggttttttctttgtgatttcatcatc 4192833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 6173536 - 6173627
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  6173536 aaatcacccctcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatctaggtttttttctttgtgatttcatcatc 6173627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 41430932 - 41431023
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggt-tttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| | |||| |||||||||||||| |||||||| ||||||||||||||    
T  41430932 aaatcacccctcttcatctttttctctatatttcaatctaaataagtcactttt-acatagatctaggtgtttttctttgtgatttcatcatc 41431023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 45128108 - 45128199
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||||  ||||||||||||||||| ||||||||| ||||||||||||||    
T  45128108 aaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ctttcacatagatctaggtttttttctttgtgatttcatcatc 45128199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 26025587 - 26025497
Alignment:
Q  157 aaatcacccc-tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcat 247  Q
    |||||||||| ||||||||||||||||| || |||||| |||||||||| |||| ||||||||||||||||||||||| |||||||||||||    
T  26025587 aaatcaccccatcttcatctttttctctctatttcaatctaaataagtggtttt-cacatagatctaggttttttctttgtgatttcatcat 26025497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 40626204 - 40626114
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||| ||||||||||| || |||||| |||||||| |||||| |||||||||||| |||||||||| ||||||||||||||    
T  40626204 aaatcacccctcttcgtctttttctctctatttcaatctaaataagggatttt-cacatagatctacgttttttctttgtgatttcatcatc 40626114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 245
Target Start/End: Original strand, 3725083 - 3725172
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatc 245  Q
    ||||||||  ||||||||||||||||||| || |||||||||||||||||| ||||||||||||||| | ||||||||| |||||||||||    
T  3725083 taaaatcattcctcttcatctttttctctctatttcaatataaataagtga-ttttcacatagatcttgattttttctttgtgatttcatc 3725172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 21570585 - 21570493
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag--gttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||   |||||| || ||||||||||||||    
T  21570585 aaatcacccctcttcatctttttctctatatttcaatctaaataagtga-ttttcacatagatctagattttttttttttgtgatttcatcatc 21570493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 30420581 - 30420673
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||  ||||||||| || |||||||||||    
T  30420581 aaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggttttttttctttgtaatttcatcatc 30420673  T

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Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 27249328 - 27249256
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  27249328 aaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 27249256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 40660106 - 40660018
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||| | |||||||||||||||||||  |||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  40660106 aaatcacacatcttcatctttttctctat--ttcaatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatc 40660018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 2808647 - 2808558
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||| ||||||| || |||| | ||||||||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  2808647 aaatcacccctcttcatctatttctctctatttcagtctaaataagtga-ttttcacatagatctagg-tttttctttgtgatttcatcatc 2808558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 8971805 - 8971713
Alignment:
Q  157 aaatcacccctcttcatctttttctctat--aattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||| |||||||||||||||||||| |  | || ||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  8971805 aaatcatccctcttcatctttttctctctttattttaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatc 8971713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 8805781 - 8805861
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||| ||||||||| || |||||| ||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  8805781 tcttcatatttttctctttatttcaatttaaataagtgatttt-cacatggatctaggttttttctttgtgatttcatcatc 8805861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 31581888 - 31581808
Alignment:
Q  165 cctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatca 246  Q
    ||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||| |||||||||  |||||||||||    
T  31581888 cctcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatctagtttttttctttttgatttcatca 31581808  T

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Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 34598902 - 34598982
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||| |||||| || ||||||||||||||    
T  34598902 tcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatctagtttttttttttgtgatttcatcatc 34598982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 36233909 - 36233981
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||| ||||||    
T  36233909 aaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctagatttttt 36233981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 39642026 - 39641944
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||| || |||||| ||||||| ||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  39642026 tcttcatctttttctctctatttcaatttaaataaatga-ttttcacatagatctaggttttttttcttcgtgatttcatcatc 39641944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 42949612 - 42949691
Alignment:
Q  151 gacttaaaatcacccctcttcatc-tttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||| |||||||||||||||||| ||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  42949612 gacttgaaatcacccctcttcatcttttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 42949691  T

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Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 3270393 - 3270315
Alignment:
Q  169 ttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||| | || |||||| ||||||||||||||| |||||||||||||||||||| || ||||||||||||||    
T  3270393 ttcatctttttctttttatttcaatctaaataagtgatttt-cacatagatctaggttttttttttgtgatttcatcatc 3270315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 7015887 - 7015797
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||||| | |||||||||||| || |||||| ||||||| ||||||| ||||||||| ||||||||||| | ||||||||||||||    
T  7015887 aaatcacccctcctaatctttttctctttatttcaatctaaataattgatttt-cacatagatttaggttttttccttgtgatttcatcatc 7015797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 32680759 - 32680667
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    ||||||| | ||||||||||||||||| || |||||| |||||||||||  |||||||||||||||||  ||||||||| ||||||||||||||    
T  32680759 aaatcactcatcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggttttttttctttgtgatttcatcatc 32680667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 459451 - 459360
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||||| |||||||| || |||| | |||||||| || ||||||||||||| |||| |||||||||||||||||| |||||    
T  459451 aaatcacccctcttcatccttttctctctatttcattttaaataagcga-ttttcacatagatataggtttttttcttcgtgatttcgtcatc 459360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 22421659 - 22421730
Alignment:
Q  176 ttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||| || |||||| ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  22421659 ttttctctctatttcaatctaaataagtgacttt-cacatagatctaggttttttctttgtgatttcatcatc 22421730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 248
Target Start/End: Complemental strand, 32197972 - 32197881
Alignment:
Q  156 aaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||| | ||||||||||||||||| || |||||||||||||| ||||||||  |||| || ||||||||||||| |||||||| |||||    
T  32197972 aaaatcactcatcttcatctttttctctttatttcaatataaataaatgattttt-gcataaatttaggttttttctttgtgatttcgtcatc 32197881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 4228036 - 4228128
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    ||||||| | ||||||| ||||| ||| || |||||||||||||||||| ||| |||||||||||| |  ||||||||| ||||||||||||||    
T  4228036 aaatcacacatcttcatatttttatctttatttcaatataaataagtga-tttacacatagatctatgttttttttctttgtgatttcatcatc 4228128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 8308097 - 8308167
Alignment:
Q  175 tttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||| ||| ||||||||| |||||  |||||||| |||||||||||||||||||||||||||||||| |||||    
T  8308097 tttttttctctaattcaatctaaat--gtgatttt-cacatagatctaggttttttcttcgtgatttcgtcatc 8308167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 9986524 - 9986428
Alignment:
Q  157 aaatcacccctcttca--tctttttctctataattcaatataaataagtgatttttcacatagatctagg----ttttttcttcgtgatttcatcatc 248  Q
    |||||| |||||||||  | ||||| ||| ||||||||| ||||||||||| ||||||||||||||||||    ||||||||| ||||||||||||||    
T  9986524 aaatcatccctcttcaattttttttatctctaattcaatctaaataagtga-ttttcacatagatctaggtttattttttctttgtgatttcatcatc 9986428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 25086938 - 25087032
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatt---tttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||  | || || ||| || |||||||| |   ||||||||||||||||||||||| ||  |||||||||||||    
T  25086938 aaatcacccctcttcatctttttccatctatttgaatctatataagtgagtgattttcacatagatctaggttttttatttttgatttcatcatc 25087032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 17319276 - 17319317
Alignment:
Q  207 ttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  17319276 ttttcacatagatctaggttttttcttcatgatttcgtcatc 17319317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 248
Target Start/End: Complemental strand, 20047252 - 20047168
Alignment:
Q  164 ccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    |||| ||||||||||||||| |  |||||| ||||||||||| |||| |||||||| |||| ||||||| | ||||||||||||||    
T  20047252 ccctattcatctttttctctctttttcaatctaaataagtgactttt-acatagatttaggtttttttcattgtgatttcatcatc 20047168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 41712942 - 41712870
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||| | |||||| |||||||| || || ||| ||||||||||| ||||||||||||| ||||||||||    
T  41712942 aaatcacccattttcatcattttctctctattttaatctaaataagtga-ttttcacatagatttaggtttttt 41712870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 24587617 - 24587669
Alignment:
Q  156 aaaatcacccctcttcatctttttctctataattcaatataaataagtgattt 208  Q
    ||||||||| |||||||||||||| |||||| |||||| ||||||| ||||||    
T  24587617 aaaatcacctctcttcatctttttatctatatttcaatttaaataaatgattt 24587669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 27949358 - 27949399
Alignment:
Q  188 ttcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    |||||| ||||||||||||||| ||||||||||||||||||||    
T  27949358 ttcaatctaaataagtgatttt-cacatagatctaggtttttt 27949399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 3269251 - 3269197
Alignment:
Q  195 taaataagtgatttttcacatagatctaggtt--ttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||| ||||||||||||||||  |||| || ||||||||||||||    
T  3269251 taaataagtgatttt-cacatagatctaggttttttttttttgtgatttcatcatc 3269197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 3269810 - 3269756
Alignment:
Q  195 taaataagtgatttttcacatagatctaggtt--ttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||| ||||||||||||||||  |||| || ||||||||||||||    
T  3269810 taaataagtgatttt-cacatagatctaggttttttttttttgtgatttcatcatc 3269756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 30923649 - 30923589
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatc 220  Q
    ||||||||| |||||||||||| ||||||  |||||| ||||||| |||||||| |||||||||    
T  30923649 aaatcacccatcttcatcttttactctat--ttcaatctaaataaatgattttt-acatagatc 30923589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 5e-28; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 14545424 - 14545514
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||| | |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  14545424 aaatcactcatcttcatctttttctctatatttcaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatc 14545514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 39987294 - 39987387
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccga 251  Q
    |||||||| |||||||||||||||||| | ||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  39987294 aaatcacctctcttcatctttttctctctgattcaatctaaataagtgatttttcatatagatcta-gttttttcttcgtgatttcaccatccga 39987387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 51871766 - 51871858
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||||| || |||||| |||||||||||  |||||||||||||||| ||||||||| ||||||||||||||    
T  51871766 taaaatcacccctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctagcttttttctttgtgatttcatcatc 51871858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 51868822 - 51868731
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||||  ||||||||||||||||| ||||||||| ||||||||||||||    
T  51868822 aaatcacccctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggtttttttctttgtgatttcatcatc 51868731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 27872643 - 27872733
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||| |||||||||||||| || || |||||| ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  27872643 aaatcacccatcttcatctttttcgctctatttcaatctaaataagtgatttt-cacatagatctaagttttttcttcgtgattgcatcatc 27872733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 38520710 - 38520620
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||| | ||||||||||||||||| || ||| || ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  38520710 aaatcactcatcttcatctttttctctctatttcgatctaaataagtgatttt-cacatagatctatgttttttcttcgtgatttcatcatc 38520620  T

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Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 5701161 - 5701233
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  5701161 aaatcacccctcttcatctttttctctttatttcaatttaaataagtga-ttttcacatagatctaggtttttt 5701233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 7997691 - 7997763
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||| ||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||    
T  7997691 aaatcacccttcttcatctttttctctttatttcaatataaataagtga-ttttcacatagatctaggtttttt 7997763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 28035043 - 28035134
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||| | ||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  28035043 aaatcactcatcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatctaggtttttttctttgtgatttcatcatc 28035134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 18569487 - 18569397
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttt-ttcttcgtgatttcatcat 247  Q
    ||||||||  ||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||| ||||    
T  18569487 aaatcacctgtcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatctaggttttcttcttcgtgatttcgtcat 18569397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 30818522 - 30818432
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||| ||||||||||||||||| || |||||| ||||||||||| |||||||||| |||||| |||||| || ||||||||||||||    
T  30818522 aaatcacccatcttcatctttttctctctatttcaatctaaataagtga-ttttcacataaatctagtttttttttttgtgatttcatcatc 30818432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 9919295 - 9919384
Alignment:
Q  159 atcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatcta-ggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||||||||| | ||||||||| ||||||||| ||||    
T  9919295 atcacccctcttcatctttttctctctatttcaatctaaataagtgattttt-acatagatctatgtttttttctttgtgatttcaccatc 9919384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 20266204 - 20266297
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag-gttttttcttcgtgatttcatcatc 248  Q
    ||||||||||| ||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||  ||||||||| || |||||||||||    
T  20266204 taaaatcacccatcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctagctttttttctttgtaatttcatcatc 20266297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 25728136 - 25728064
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||| ||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  25728136 aaatcactcctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 25728064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 25406461 - 25406370
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||||| ||||||||||||||||||| || |||||| |||||||||||  ||||||||||||||||| ||||||||| |||||||| |||||    
T  25406461 aaatcacacctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggtttttttctttgtgatttcgtcatc 25406370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 34519054 - 34519127
Alignment:
Q  174 ctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  34519054 ctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatc 34519127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 3871319 - 3871403
Alignment:
Q  163 cccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||| ||||||||| |||||  | |||||| ||||||||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  3871319 ccccttttcatctttctctctcaatttcaatctaaataagtgatttt-cacatagatctaagttttttctttgtgatttcatcatc 3871403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 11453847 - 11453930
Alignment:
Q  166 ctcttcatctttttctctat--aattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||||| |  | |||||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  11453847 ctcttcatctttttctctctctatttcaatctaaataagtggtttt-cacatagatctaggttttttctttgtgatttcatcatc 11453930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 35584798 - 35584726
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||| | ||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  35584798 aaatcactcatcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 35584726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 50272317 - 50272229
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatct-aggttttttcttcgtgatttcatc 245  Q
    ||||||||||| ||||||||||||||| || |||||| ||||||||| | ||||||||||||||| || ||||||||| |||||||||||    
T  50272317 aaatcacccctattcatctttttctctttatttcaatctaaataagt-aattttcacatagatctaagtttttttctttgtgatttcatc 50272229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 7312266 - 7312191
Alignment:
Q  166 ctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttc 242  Q
    |||||||||||||||||| || |||||  ||||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  7312266 ctcttcatctttttctctctatttcaaattaaataaatgatttt-cacgtagatctaggttttttcttcgtgatttc 7312191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 19723231 - 19723328
Alignment:
Q  151 gacttaaaatcacccctcttcatcttttt-ctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    ||||| |||||||| |||||||| ||||| |||| || |||||| ||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  19723231 gacttgaaatcacctctcttcatattttttctctcta-ttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatc 19723328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 5324733 - 5324644
Alignment:
Q  158 aatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||| |||||||||||||||||| || |||||| ||||||||||| ||||||| || || || |||||| ||| ||||||||||||||    
T  5324733 aatcacctctcttcatctttttctctctatttcaatctaaataagtga-ttttcacgtaaatttaagtttttcctttgtgatttcatcatc 5324644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 19716067 - 19716002
Alignment:
Q  164 ccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    |||||||||||||||||||| || |||||| ||||||||||| ||||||||||||| ||||||||||    
T  19716067 ccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatttaggtttttt 19716002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 9172392 - 9172464
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||||||||| ||||| ||| || |||||| |||||||||||  |||||||||||||||||||||||    
T  9172392 aaatcacccctcttcatatttttttctctatttcaatctaaataagtga-ctttcacatagatctaggtttttt 9172464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 9180374 - 9180446
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||||||||| ||||| ||| || |||||| |||||||||||  |||||||||||||||||||||||    
T  9180374 aaatcacccctcttcatatttttttctctatttcaatctaaataagtga-ctttcacatagatctaggtttttt 9180446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 33291596 - 33291504
Alignment:
Q  157 aaatcacccctcttcatcttttt-ctctataattcaatataaataagtgatttttcacatagatcta-ggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||| ||||| || | || |||||||||||||||||| |||||||||| ||||| | ||||||||| ||||||||||||||    
T  33291596 aaatcacccctcttcattttttttctttctatttcaatataaataagtga-ttttcacataaatctatgtttttttctttgtgatttcatcatc 33291504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 40646590 - 40646684
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    ||||||||| | ||||||||||||||| | || |||||| ||||||||||| ||||||| ||||||||||  ||||||||| || |||||||||||    
T  40646590 taaaatcactcatcttcatctttttctatttatttcaatctaaataagtga-ttttcacgtagatctaggttttttttctttgtaatttcatcatc 40646684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 40881192 - 40881118
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||| | ||||||||||||||||| || |||||| ||||| ||||| ||||||| ||||||||||||||||    
T  40881192 taaaatcactcatcttcatctttttctctctatttcaatctaaatgagtga-ttttcacttagatctaggtttttt 40881118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 44637323 - 44637416
Alignment:
Q  155 taaaatcacccctcttcatc-tttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||| ||||||||| ||||| ||| || |||||| ||||||||||| ||||||| |||||||| |||| ||||| |||||||| |||||    
T  44637323 taaaatcacctctcttcatcttttttatctttatttcaatctaaataagtga-ttttcacgtagatctaagtttcttctttgtgatttcgtcatc 44637416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 248
Target Start/End: Complemental strand, 30558832 - 30558742
Alignment:
Q  156 aaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||| || ||||||||| ||||||| | || |||||| |||| |||||||||  |||| ||||||||||||||||||  |||||||||||||    
T  30558832 aaaataactcctcttcatatttttctttctatttcaatctaaaaaagtgattt--cacacagatctaggttttttctttatgatttcatcatc 30558742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 50148276 - 50148348
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    |||||| || |||||||| |||||||| || || ||| ||||||||||| ||||||||||||||||||||||||    
T  50148276 aaatcatccatcttcatccttttctctttattttaatctaaataagtga-ttttcacatagatctaggtttttt 50148348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 7342626 - 7342717
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatcta-ggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||| ||||| | | || |||||| ||||||||||| |||| || |||||||| | ||||||||| ||||||||||||||    
T  7342626 aaatcacccctcttcatatttttttatctatttcaatctaaataagtgactttt-acgtagatctatgtttttttctttgtgatttcatcatc 7342717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 30878988 - 30879051
Alignment:
Q  166 ctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    |||||||||||||||||| || || ||| ||||||||||| |||||||||||||||| |||||||    
T  30878988 ctcttcatctttttctctttattttaatctaaataagtga-ttttcacatagatctatgtttttt 30879051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 50166270 - 50166185
Alignment:
Q  163 cccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatc 248  Q
    |||||||| |||||||||| | || |||||| |||||||||||  |||||||||||| |||| ||||||||  ||||||||||||||    
T  50166270 cccctctttatctttttctatctatttcaatctaaataagtga-atttcacatagatttaggtttttttctatgtgatttcatcatc 50166185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 45426227 - 45426167
Alignment:
Q  169 ttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 230  Q
    ||||||||||||||| || || ||| ||||||||||| |||||||||||||||| |||||||    
T  45426227 ttcatctttttctctctatttaaatctaaataagtga-ttttcacatagatctaagtttttt 45426167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 31836748 - 31836802
Alignment:
Q  195 taaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||| ||||||||||||||  ||||||||| || |||||||||||    
T  31836748 taaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatc 31836802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 48365883 - 48365851
Alignment:
Q  216 agatctaggttttttcttcgtgatttcatcatc 248  Q
    ||||||||||||||||||||||||||| |||||    
T  48365883 agatctaggttttttcttcgtgatttcgtcatc 48365851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 248
Target Start/End: Original strand, 8615 - 8710
Alignment:
Q  152 acttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||| ||||||||||| ||||||||||| ||| || |||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  8615 acttgaaatcaccccttttcatctttttatctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatc 8710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 201534 - 201458
Alignment:
Q  171 catctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 248  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  201534 catctttttctctatatttcaatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatc 201458  T

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Target: scaffold0495 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 5298 - 5388
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatcta-ggttttttcttcgtgatttcatcat 247  Q
    ||||||||||||||||||||| ||||| || |||||| ||||||||||| |||| ||||| ||||| | ||||||||| |||||||||||||    
T  5298 aaatcacccctcttcatctttctctctctacttcaatctaaataagtgactttt-acatatatctatgtttttttctttgtgatttcatcat 5388  T

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Target: scaffold0146 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 16489 - 16406
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg---ttttttcttcgtgatttcatcatc 248  Q
    ||||||||| ||||||| || |||||| ||||||||||| ||||||||||||| ||||   ||||||||| ||||||||||||||    
T  16489 tcttcatctgtttctctctatttcaatctaaataagtga-ttttcacatagatttaggtttttttttctttgtgatttcatcatc 16406  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 361971 - 361886
Alignment:
Q  157 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcat 247  Q
    ||||||||||||| |||||||||||||||  |||||| ||||||||| | ||||||||||||  |||||||||  || |||||||||||||    
T  361971 aaatcacccctctccatctttttctctat--ttcaatctaaataagt-aattttcacatagagttaggttttt--tttgtgatttcatcat 361886  T

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Target: scaffold0426 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 6236 - 6290
Alignment:
Q  155 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttt 209  Q
    ||||||||||||||||||||||||| ||| || | |||| |||||||||||||||    
T  6236 taaaatcacccctcttcatctttttttctctattccaatctaaataagtgatttt 6290  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 453851 - 453917
Alignment:
Q  175 tttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttc 242  Q
    ||||||||| || || ||| ||||||||||||||| |||||| || || |||||||||||||||||||    
T  453851 tttttctctttattttaatttaaataagtgatttt-cacatatatttacgttttttcttcgtgatttc 453917  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 36852 - 36780
Alignment:
Q  167 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgattt 241  Q
    ||||||||||||||  | || ||||||||||||||||||||||| ||||| | ||| ||||||||||| ||||||    
T  36852 tcttcatctttttcgttgtatttcaatataaataagtgattttt-acatata-ctaagttttttcttcatgattt 36780  T

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