View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2932_low_31 (Length: 305)

Name: NF2932_low_31
Description: NF2932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2932_low_31
NF2932_low_31
[»] chr8 (19 HSPs)
chr8 (10-290)||(10616885-10617165)
chr8 (61-289)||(38685792-38686010)
chr8 (63-139)||(37929141-37929217)
chr8 (57-120)||(7179038-7179101)
chr8 (58-136)||(41255029-41255107)
chr8 (244-291)||(7178865-7178912)
chr8 (63-126)||(33191205-33191268)
chr8 (58-120)||(8462521-8462583)
chr8 (214-289)||(43776405-43776482)
chr8 (61-139)||(38233234-38233312)
chr8 (248-289)||(38233408-38233449)
chr8 (58-122)||(21523889-21523953)
chr8 (63-126)||(5048520-5048583)
chr8 (57-120)||(16489468-16489531)
chr8 (63-125)||(33282849-33282911)
chr8 (244-290)||(41254879-41254925)
chr8 (244-289)||(42715377-42715422)
chr8 (232-288)||(32988356-32988412)
chr8 (58-114)||(39435468-39435523)
[»] chr2 (14 HSPs)
chr2 (61-289)||(40426765-40426993)
chr2 (58-139)||(841537-841618)
chr2 (58-126)||(24739846-24739914)
chr2 (222-289)||(1997535-1997602)
chr2 (221-289)||(29691291-29691360)
chr2 (61-139)||(1997686-1997764)
chr2 (63-120)||(33645844-33645901)
chr2 (186-289)||(38409149-38409253)
chr2 (79-118)||(9840816-9840855)
chr2 (57-120)||(45131134-45131197)
chr2 (244-290)||(841385-841431)
chr2 (63-120)||(44735983-44736040)
chr2 (87-119)||(35590281-35590313)
chr2 (66-114)||(38409024-38409072)
[»] chr6 (8 HSPs)
chr6 (61-289)||(15117090-15117318)
chr6 (61-288)||(18672067-18672293)
chr6 (58-139)||(32533053-32533134)
chr6 (62-120)||(11298600-11298658)
chr6 (57-120)||(29321332-29321395)
chr6 (63-125)||(11324501-11324563)
chr6 (61-118)||(18015755-18015812)
chr6 (63-120)||(2682796-2682853)
[»] chr5 (15 HSPs)
chr5 (58-139)||(7961133-7961214)
chr5 (191-289)||(7465376-7465474)
chr5 (191-290)||(12564749-12564848)
chr5 (191-291)||(16143500-16143600)
chr5 (61-118)||(29994650-29994707)
chr5 (57-122)||(32017990-32018055)
chr5 (82-125)||(32252172-32252215)
chr5 (61-139)||(7465255-7465333)
chr5 (57-125)||(21041977-21042045)
chr5 (244-291)||(21042166-21042213)
chr5 (63-126)||(25326157-25326220)
chr5 (232-290)||(7960983-7961041)
chr5 (63-125)||(16610602-16610664)
chr5 (58-120)||(39839933-39839995)
chr5 (61-98)||(12564923-12564960)
[»] chr4 (24 HSPs)
chr4 (58-139)||(10552667-10552748)
chr4 (191-289)||(18922075-18922173)
chr4 (60-118)||(42527352-42527410)
chr4 (57-125)||(25130444-25130512)
chr4 (62-137)||(11131178-11131253)
chr4 (63-125)||(13137114-13137176)
chr4 (186-287)||(42527192-42527294)
chr4 (63-125)||(52578018-52578080)
chr4 (57-139)||(54870807-54870889)
chr4 (61-289)||(30739358-30739586)
chr4 (63-118)||(40153935-40153990)
chr4 (212-289)||(13137265-13137343)
chr4 (57-120)||(27270014-27270077)
chr4 (63-126)||(29969878-29969941)
chr4 (57-120)||(30972396-30972459)
chr4 (63-126)||(43001743-43001806)
chr4 (61-139)||(18921944-18922022)
chr4 (244-290)||(42790548-42790594)
chr4 (57-139)||(48336988-48337070)
chr4 (57-122)||(21204904-21204969)
chr4 (63-120)||(53650441-53650498)
chr4 (224-289)||(8815548-8815615)
chr4 (58-114)||(29521703-29521759)
chr4 (224-289)||(45637625-45637691)
[»] chr7 (12 HSPs)
chr7 (58-139)||(40616723-40616804)
chr7 (58-119)||(27854911-27854972)
chr7 (57-118)||(38342992-38343053)
chr7 (221-288)||(24904921-24904990)
chr7 (58-118)||(40348008-40348068)
chr7 (244-291)||(27855099-27855146)
chr7 (57-120)||(34871594-34871657)
chr7 (57-119)||(27076600-27076662)
chr7 (57-119)||(27201639-27201701)
chr7 (63-117)||(29374715-29374769)
chr7 (63-120)||(17116411-17116468)
chr7 (63-120)||(38153939-38153996)
[»] chr1 (17 HSPs)
chr1 (67-288)||(50039686-50039904)
chr1 (61-203)||(12688210-12688353)
chr1 (57-125)||(5411767-5411835)
chr1 (57-137)||(28442136-28442216)
chr1 (57-120)||(28400523-28400586)
chr1 (63-120)||(26260785-26260842)
chr1 (57-125)||(48973679-48973747)
chr1 (63-118)||(5958336-5958391)
chr1 (63-126)||(6723713-6723776)
chr1 (58-125)||(44675124-44675191)
chr1 (61-290)||(45718365-45718595)
chr1 (244-291)||(28441979-28442026)
chr1 (63-126)||(34703484-34703547)
chr1 (244-291)||(48973868-48973915)
chr1 (63-120)||(9484879-9484936)
chr1 (224-289)||(2653561-2653627)
chr1 (224-289)||(52251539-52251606)
[»] chr3 (21 HSPs)
chr3 (57-119)||(19979287-19979349)
chr3 (57-120)||(22534031-22534094)
chr3 (57-120)||(29542395-29542458)
chr3 (57-120)||(41878720-41878783)
chr3 (63-120)||(42806297-42806354)
chr3 (193-290)||(25408927-25409027)
chr3 (61-119)||(47161020-47161078)
chr3 (63-116)||(45966984-45967037)
chr3 (57-139)||(53876870-53876952)
chr3 (60-125)||(6925982-6926047)
chr3 (244-289)||(44109474-44109519)
chr3 (244-291)||(19979112-19979160)
chr3 (244-291)||(22534222-22534269)
chr3 (57-120)||(25845676-25845739)
chr3 (63-126)||(36803192-36803255)
chr3 (63-118)||(37537238-37537293)
chr3 (220-289)||(3694563-3694634)
chr3 (57-125)||(6894221-6894289)
chr3 (63-119)||(33692909-33692965)
chr3 (249-289)||(41935714-41935754)
chr3 (244-288)||(42806127-42806171)
[»] scaffold0225 (1 HSPs)
scaffold0225 (57-125)||(6533-6601)
[»] scaffold0204 (1 HSPs)
scaffold0204 (57-139)||(24510-24592)
[»] scaffold0795 (1 HSPs)
scaffold0795 (63-116)||(2192-2245)


Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 10 - 290
Target Start/End: Original strand, 10616885 - 10617165
Alignment:
Q  10 aaaataactcaagatccgtcactgctcattcaacacaacatgcatggtttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggtt 109  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  10616885 aaaataattcaagatccgtcactgctcattcaacacaacatgcatggtttcaagtggttggaggtgaagtttgctactattcctttcaactatcatggtt 10616984  T
Q  110 ggtggcttagttcgttcgctttattaggcacatactaatttatgttgtttcgtgagctgttttgaggtgatggctcttgcattgtaaatattgttgtaac 209  Q
    |||||||||||||||||||||||||||||| |  ||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  10616985 ggtggcttagttcgttcgctttattaggcataggctaatttctgttgtttcctgagctgttttgaggtgatggctctttcattgtaaatattgttgtaac 10617084  T
Q  210 tctgttttgtttttggtgtttcttccttgacattccttgtgctaggaaggccattgttgtgttaatataattcattttagt 290  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10617085 tctgttttgtctttggtgtttcttccttggcattccttgtgctaggaaggccattgttgtgttaatataattcattttagt 10617165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 289
Target Start/End: Original strand, 38685792 - 38686010
Alignment:
Q  61 aagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggcacatactaatttatgttgtttc 160  Q
    ||||||| ||||||||||| |||||||||||| || |||||||||||||||||| ||||| ||||| |||||||||||  |   |||| | ||| || ||    
T  38685792 aagtggtcgaaggtgaagtatgctactcttccctttaactatcatggttggtggattagtccgttcactttattaggcgtaggataatctctgtagtctc 38685891  T
Q  161 gtgagctgttttgaggtgatggctcttgcattgtaaatattgttgtaactctgttttgtttttggtgtttcttccttgacattccttgtgctaggaaggc 260  Q
     |  |||| |          ||||||||| |||||| ||||| ||| |  |||| |||| |||||||||||||||||  ||  ||| |||| ||||| ||    
T  38685892 ctttgctgct----------ggctcttgccttgtaattattgatgtcatactgtgttgtctttggtgtttcttccttagcacgcctagtgccaggaatgc 38685981  T
Q  261 cattgttgtgttaatataattcattttag 289  Q
    |||||||||||||||||| ||||||||||    
T  38685982 cattgttgtgttaatatatttcattttag 38686010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 37929141 - 37929217
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggca 139  Q
    ||||||||||||||| ||| |||||||||| || |||||||||||||||||||||||| ||||| | || |||||||    
T  37929141 gtggttgaaggtgaaatttcctactcttccctttaactatcatggttggtggcttagtccgttcaccttgttaggca 37929217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 7179101 - 7179038
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    ||||||||||||||||||||||||||  |||||||| || |||||||||| |||||||||||||    
T  7179101 tttcaagtggttgaaggtgaagtttgtaactcttccctttaactatcatgattggtggcttagt 7179038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 41255107 - 41255029
Alignment:
Q  58 ttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattag 136  Q
    ||||||||||||||||| || | ||||  |||||| || |||||||||||||||||||||||| ||||| |||||||||    
T  41255107 ttcaagtggttgaaggttaactatgcttatcttccctttaactatcatggttggtggcttagtccgttccctttattag 41255029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 291
Target Start/End: Complemental strand, 7178912 - 7178865
Alignment:
Q  244 ccttgtgctaggaaggccattgttgtgttaatataattcattttagtt 291  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  7178912 ccttgtgctaggaaggcctttgttgtgttaatatatttcattttagtt 7178865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 33191268 - 33191205
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttc 126  Q
    |||||||||| |||| |||| ||||||||| ||||| ||||||||||||||||||||| |||||    
T  33191268 gtggttgaagttgaaatttgatactcttcccttcaattatcatggttggtggcttagtccgttc 33191205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 8462583 - 8462521
Alignment:
Q  58 ttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    |||| ||||||||||| ||| |||||| ||||||| ||||| |||||||||||||||||||||    
T  8462583 ttcatgtggttgaaggcgaaatttgcttctcttcccttcaattatcatggttggtggcttagt 8462521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 43776405 - 43776482
Alignment:
Q  214 ttttgtttttggtgtttcttccttgacattccttgtgctaggaaggccatt--gttgtgttaatataattcattttag 289  Q
    |||||||| |||||||||||||||   |  |||||||||||||||||||||  |||||| ||||||||||||||||||    
T  43776405 ttttgtttatggtgtttcttccttagtacaccttgtgctaggaaggccattttgttgtggtaatataattcattttag 43776482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 38233234 - 38233312
Alignment:
Q  61 aagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggca 139  Q
    ||||||||||||||||||| |||  ||||||| || || |||||||||||||||  |||| | ||| ||||||||||||    
T  38233234 aagtggttgaaggtgaagtatgcatctcttccctttaattatcatggttggtggtctagtcctttcactttattaggca 38233312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 38233408 - 38233449
Alignment:
Q  248 gtgctaggaaggccattgttgtgttaatataattcattttag 289  Q
    ||||||||||||||| ||||||||||||||| ||||||||||    
T  38233408 gtgctaggaaggccaatgttgtgttaatatatttcattttag 38233449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 122
Target Start/End: Original strand, 21523889 - 21523953
Alignment:
Q  58 ttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttc 122  Q
    |||| ||||||||| | ||||||| |  ||||||| |||||||||||||||||||| ||||||||    
T  21523889 ttcatgtggttgaaagcgaagtttccatctcttcccttcaactatcatggttggtgacttagttc 21523953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 5048520 - 5048583
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttc 126  Q
    ||||||||||||||| ||   ||| ||||| ||||||| ||||||||||||||||||| |||||    
T  5048520 gtggttgaaggtgaaattaaatacgcttcccttcaactttcatggttggtggcttagtccgttc 5048583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 16489531 - 16489468
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    |||| ||||||||||||||||||||| |  ||||| ||| ||||||||| | ||||||||||||    
T  16489531 tttccagtggttgaaggtgaagtttgttcatcttctttttaactatcataggtggtggcttagt 16489468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 33282849 - 33282911
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgtt 125  Q
    |||||||||||  || |||||| |||| ||| |||| ||||||||||||||||||||| ||||    
T  33282849 gtggttgaaggaaaaatttgcttctctccctctcaattatcatggttggtggcttagtccgtt 33282911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 41254925 - 41254879
Alignment:
Q  244 ccttgtgctaggaaggccattgttgtgttaatataattcattttagt 290  Q
    ||||||||||||||| || | |||||| |||||||||||||||||||    
T  41254925 ccttgtgctaggaagaccttcgttgtggtaatataattcattttagt 41254879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 42715377 - 42715422
Alignment:
Q  244 ccttgtgctaggaaggccattgttgtgttaatataattcattttag 289  Q
    |||||||||||||||||| |||| |||||| |||| ||||||||||    
T  42715377 ccttgtgctaggaaggcccttgtggtgttattatatttcattttag 42715422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 32988412 - 32988356
Alignment:
Q  232 ttccttgacattccttgtgctaggaaggccattgttgtgttaatataattcatttta 288  Q
    ||||||| ||| ||||||||||||||| || | |||| | |||||||||||||||||    
T  32988412 ttccttggcatgccttgtgctaggaagaccttcgttgcgataatataattcatttta 32988356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 39435523 - 39435468
Alignment:
Q  58 ttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtgg 114  Q
    |||| ||||||||||| ||| |||||| ||||||||||| | |||||||||||||||    
T  39435523 ttcatgtggttgaaggcgaaatttgcttctcttcctttc-attatcatggttggtgg 39435468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 61 - 289
Target Start/End: Complemental strand, 40426993 - 40426765
Alignment:
Q  61 aagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggcacatactaatttatgttgtttc 160  Q
    |||| |||||| ||||||| || ||||||||| || |||||||||||||||||||||| | ||||| ||||| ||||||    |||| |||||| |||||    
T  40426993 aagtagttgaaagtgaagtatgttactcttccctttaactatcatggttggtggcttaatccgttcactttactaggcatcggctaaattatgtagtttc 40426894  T
Q  161 gtgagctgttttgaggtgatggctcttgcattgtaaatattgttgtaactctgttttgtttttggtgtttcttccttgacattccttgtgctaggaaggc 260  Q
     |  | ||||||  |||| |||||| | | |||||||||||||||| |||||||| ||| |||||||||||||||||  ||  ||| ||| |||||||||    
T  40426893 ctttgttgttttatggtgttggctcataccttgtaaatattgttgttactctgttctgtctttggtgtttcttccttagcacacctagtgttaggaaggc 40426794  T
Q  261 cattgttgtgttaatataattcattttag 289  Q
    |||||||||||||||||| ||||||||||    
T  40426793 cattgttgtgttaatatatttcattttag 40426765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 841618 - 841537
Alignment:
Q  58 ttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggca 139  Q
    |||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||  |||| ||||| ||||||    
T  841618 ttcaagtggttgaaggtgaagtatgctactcttccctttaactatcatggttggtggcttagtctgttcactttactaggca 841537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 24739846 - 24739914
Alignment:
Q  58 ttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttc 126  Q
    |||||||||||||||||||||| |||||| ||||| || |||||||||||||||||||||||| |||||    
T  24739846 ttcaagtggttgaaggtgaagtatgctacccttccctttaactatcatggttggtggcttagtccgttc 24739914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 1997602 - 1997535
Alignment:
Q  222 ttggtgtttcttccttgacattccttgtgctaggaaggccattgttgtgttaatataattcattttag 289  Q
    ||||||||||||||||  ||  ||| |||||||||||||||  |||||||||||||| ||||||||||    
T  1997602 ttggtgtttcttccttagcacacctagtgctaggaaggccaaagttgtgttaatatatttcattttag 1997535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 289
Target Start/End: Original strand, 29691291 - 29691360
Alignment:
Q  221 tttggtgtttcttccttgacattccttgtgctaggaaggccatt--gttgtgttaatataattcattttag 289  Q
    |||||||||||||||||| ||  |||||||||||||||||||||  |||| ||||||||| ||||||||||    
T  29691291 tttggtgtttcttccttg-cacaccttgtgctaggaaggccatttggttgagttaatatatttcattttag 29691360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 1997764 - 1997686
Alignment:
Q  61 aagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggca 139  Q
    ||||||||||||||||||| |||  ||||||| || || |||||||||||||||  |||| | ||| ||||||||||||    
T  1997764 aagtggttgaaggtgaagtatgcatctcttccctttaattatcatggttggtggaatagtcctttcactttattaggca 1997686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 33645901 - 33645844
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    |||||||||||  || |||||||||||||||||||| || |||||||||||| |||||    
T  33645901 gtggttgaaggaaaaatttgctactcttcctttcaattaccatggttggtgggttagt 33645844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 38409149 - 38409253
Alignment:
Q  186 ttgcattgtaaatattgttgtaactctgttttgtttttggtgtttcttccttgacattccttgtgctaggaaggccatt-gttgtgttaatataattcat 284  Q
    |||| |||||| |||||||   ||| ||||||| || |||||||||||||| ||||   ||| || |||||||||| || |||||| |||||||||||||    
T  38409149 ttgccttgtaattattgtttatactttgttttgattctggtgtttcttcctcgacacaacttatgttaggaaggccttttgttgtggtaatataattcat 38409248  T
Q  285 tttag 289  Q
    |||||    
T  38409249 tttag 38409253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 9840816 - 9840855
Alignment:
Q  79 tttgctactcttcctttcaactatcatggttggtggctta 118  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  9840816 tttgctactcttccattcaattatcatggttggtggctta 9840855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 45131197 - 45131134
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    ||||| ||||||||||| ||| | |||| ||||||| ||||| |||||||| ||||||||||||    
T  45131197 tttcatgtggttgaaggggaaatatgcttctcttcccttcaattatcatgggtggtggcttagt 45131134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 841431 - 841385
Alignment:
Q  244 ccttgtgctaggaaggccattgttgtgttaatataattcattttagt 290  Q
    ||||||||||||||| || | |||||| |||||||||||||||||||    
T  841431 ccttgtgctaggaagaccttcgttgtggtaatataattcattttagt 841385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 44736040 - 44735983
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    ||||||||||| |||||||  ||||||||| ||||| | |||||||| ||||||||||    
T  44736040 gtggttgaaggcgaagtttaatactcttcccttcaattttcatggttagtggcttagt 44735983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 119
Target Start/End: Original strand, 35590281 - 35590313
Alignment:
Q  87 tcttcctttcaactatcatggttggtggcttag 119  Q
    |||||| ||||||||||||||||||||||||||    
T  35590281 tcttcccttcaactatcatggttggtggcttag 35590313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 38409024 - 38409072
Alignment:
Q  66 gttgaaggtgaagtttgctactcttcctttcaactatcatggttggtgg 114  Q
    |||||||||||| || ||||| ||||| ||||| |||||||||||||||    
T  38409024 gttgaaggtgaaattcgctacacttcccttcaattatcatggttggtgg 38409072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 289
Target Start/End: Complemental strand, 15117318 - 15117090
Alignment:
Q  61 aagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggcacatactaatttatgttgtttc 160  Q
    ||||||||||||||||||| |||||||||||| || || |||||||||||||||  |||| | ||| |||||||||||| ||  |||  ||| | || ||    
T  15117318 aagtggttgaaggtgaagtatgctactcttccctttaattatcatggttggtggagtagtcctttcactttattaggcatatgataaactatatagtctc 15117219  T
Q  161 gtgagctgttttgaggtgatggctcttgcattgtaaatattgttgtaactctgttttgtttttggtgtttcttccttgacattccttgtgctaggaaggc 260  Q
     |  ||||||||  |||| ||||||| || |||||| ||||| | |||  || | |||  |||||||||||||||||  ||  ||| |||||||||||||    
T  15117218 ctttgctgttttttggtgctggctctggccttgtaattattgatataatactatgttgactttggtgtttcttccttagcacacctagtgctaggaaggc 15117119  T
Q  261 cattgttgtgttaatataattcattttag 289  Q
    || ||||||||||||||| ||||||||||    
T  15117118 caatgttgtgttaatatatttcattttag 15117090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 288
Target Start/End: Original strand, 18672067 - 18672293
Alignment:
Q  61 aagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggcacatactaatttatgttgtttc 160  Q
    ||||||||||||||||||| | |||||||||| || |||||||||||||||||||| ||| ||||| | ||| |||||| |  ||||| | ||| || ||    
T  18672067 aagtggttgaaggtgaagtat-ctactcttccctttaactatcatggttggtggctgagtccgttcaccttactaggcataggctaatctctgtagtctc 18672165  T
Q  161 gtgagctgttttgaggtgatggctcttgcattgtaaatattgttgtaactctgttttgtttttggtgtttcttccttgacattccttgtgctaggaaggc 260  Q
     |  | ||||||  |||| |||||| | | |||||||||||| |||  | || |||||| ||||||||||||| |||  ||  |||  |||||||||| |    
T  18672166 ctttgttgttttctggtgctggctcatactttgtaaatattgatgttgcacttttttgtctttggtgtttcttgcttagcacacctaatgctaggaagac 18672265  T
Q  261 cattgttgtgttaatataattcatttta 288  Q
    |||||||||||||||||| |||||||||    
T  18672266 cattgttgtgttaatatatttcatttta 18672293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 32533134 - 32533053
Alignment:
Q  58 ttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggca 139  Q
    ||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||| ||||| |||||| |||||    
T  32533134 ttcaagtggttgaagatgaagtttgctactcttccctttaactatcatggttggtggcttagtccgttcactttatgaggca 32533053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 11298658 - 11298600
Alignment:
Q  62 agtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    |||||||||||||||||||||  |||||||| || ||||||||||||||||||||||||    
T  11298658 agtggttgaaggtgaagtttgtcactcttccctttaactatcatggttggtggcttagt 11298600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 29321395 - 29321332
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    |||| |||||||||| ||||||||||  |||||||| || |||||| |||||||||||||||||    
T  29321395 tttccagtggttgaaagtgaagtttgtcactcttccctttaactatgatggttggtggcttagt 29321332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 11324501 - 11324563
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgtt 125  Q
    ||||||||||| ||| |||||| ||||||| ||||| |||||||| |||||||||||| ||||    
T  11324501 gtggttgaaggcgaaatttgcttctcttcccttcaattatcatgggtggtggcttagtccgtt 11324563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 18015812 - 18015755
Alignment:
Q  61 aagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggctta 118  Q
    |||||||||  |||||||||| | |||||||| || ||||||||||||||||||||||    
T  18015812 aagtggttgggggtgaagtttacaactcttccctttaactatcatggttggtggctta 18015755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 2682796 - 2682853
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    ||||||||||||||| ||| ||||| |||  ||||| | |||||||||||||||||||    
T  2682796 gtggttgaaggtgaaatttcctactattctcttcaattgtcatggttggtggcttagt 2682853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 7961214 - 7961133
Alignment:
Q  58 ttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggca 139  Q
    |||||||||||||||| ||||| ||||||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||    
T  7961214 ttcaagtggttgaaggcgaagtatgctactcttcattttaactatcatggttggtggcttagttcgttcactttactaggca 7961133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 191 - 289
Target Start/End: Original strand, 7465376 - 7465474
Alignment:
Q  191 ttgtaaatattgttgtaactctgttttgtttttggtgtttcttccttgacattccttgtgctaggaaggccattgttgtgttaatataattcattttag 289  Q
    |||||| |||||||||||  |||| ||| |||| |||||||||||||  ||  ||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  7465376 ttgtaattattgttgtaatactgtgttgattttagtgtttcttccttagcacacctagtgctaggaaggccaatgttgtgttaatatatttcattttag 7465474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 12564848 - 12564749
Alignment:
Q  191 ttgtaaatattgttgtaactctgttttgtttttggtgtttcttccttgacattccttgtgctaggaaggccattgttgtgttaatataattcattttagt 290  Q
    |||||| ||||| |||||  |||| |||  |||||||||||||||||  ||  ||| ||||||||||| ||||||||||||||||||| |||||||||||    
T  12564848 ttgtaattattgatgtaatactgtgttgactttggtgtttcttccttagcacacctagtgctaggaagaccattgttgtgttaatatatttcattttagt 12564749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 16143600 - 16143500
Alignment:
Q  191 ttgtaaatattgttgtaactctgttttgtttttggtgtttcttccttgacattccttgtgctaggaaggccattgttgtgttaatataattcattttagt 290  Q
    |||||| || ||||||||  |||| |||  |||||||||||||||||  ||  ||| ||||||||||||||| |||| |||||||||| |||||||||||    
T  16143600 ttgtaattactgttgtaatactgtgttgactttggtgtttcttccttagcacacctagtgctaggaaggccaatgttatgttaatatatttcattttagt 16143501  T
Q  291 t 291  Q
    |    
T  16143500 t 16143500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 29994650 - 29994707
Alignment:
Q  61 aagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggctta 118  Q
    ||||||||||||||||||||| ||  |||||| ||||| |||||||||||||||||||    
T  29994650 aagtggttgaaggtgaagtttccttttcttcccttcaattatcatggttggtggctta 29994707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 32018055 - 32017990
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttc 122  Q
    ||||||||||||||||||| ||| |||||  ||||| || || |||||||||||||||||||||||    
T  32018055 tttcaagtggttgaaggtgcagtatgctaaccttccctttaattatcatggttggtggcttagttc 32017990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 32252172 - 32252215
Alignment:
Q  82 gctactcttcctttcaactatcatggttggtggcttagttcgtt 125  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||    
T  32252172 gctactcttcctttcaattatcatggttggtggcttagtccgtt 32252215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 7465255 - 7465333
Alignment:
Q  61 aagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggca 139  Q
    ||||||||||||||||||| |||  ||||||| || || |||||||||||||||  |||| | ||| ||||||||||||    
T  7465255 aagtggttgaaggtgaagtatgcatctcttccctttaattatcatggttggtggtctagtcctttcactttattaggca 7465333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 21041977 - 21042045
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgtt 125  Q
    ||||||||||||  ||||||||||||  |||||||| || || |||||||| |||||||||||| ||||    
T  21041977 tttcaagtggttataggtgaagtttgtaactcttccctttaattatcatgggtggtggcttagtccgtt 21042045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 21042166 - 21042213
Alignment:
Q  244 ccttgtgctaggaaggccattgttgtgttaatataattcattttagtt 291  Q
    |||||||||||||||||| | | |||||||||||| ||||||||||||    
T  21042166 ccttgtgctaggaaggccttaggtgtgttaatatatttcattttagtt 21042213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 25326157 - 25326220
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttc 126  Q
    |||||||||||| || |||| ||||||| | ||||| || ||| ||||||||||||||||||||    
T  25326157 gtggttgaaggtaaaatttgttactcttgccttcaattaccatcgttggtggcttagttcgttc 25326220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 7961041 - 7960983
Alignment:
Q  232 ttccttgacattccttgtgctaggaaggccattgttgtgttaatataattcattttagt 290  Q
    ||||||||||| ||||||||||||||| |  | || ||| |||||||||||||||||||    
T  7961041 ttccttgacatcccttgtgctaggaagactttcgtggtggtaatataattcattttagt 7960983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 16610602 - 16610664
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgtt 125  Q
    ||||||||||  |||||||| | ||||||| ||||| |||||||| |||||||||||| ||||    
T  16610602 gtggttgaagacgaagtttgtttctcttcccttcaattatcatgggtggtggcttagtccgtt 16610664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 39839933 - 39839995
Alignment:
Q  58 ttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    |||| ||||||||||  ||||||| |  ||||||| || ||||||||||||||||||||||||    
T  39839933 ttcatgtggttgaagacgaagtttccatctcttccctttaactatcatggttggtggcttagt 39839995  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 12564960 - 12564923
Alignment:
Q  61 aagtggttgaaggtgaagtttgctactcttcctttcaa 98  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  12564960 aagtggttgaaggtgaagtatgctactattcctttcaa 12564923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 10552667 - 10552748
Alignment:
Q  58 ttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggca 139  Q
    |||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||| ||||| ||||| ||||||    
T  10552667 ttcaagtggttgaaggtgaagtatgctactcttccctttaactatcatggttggtggcttagtccgttcactttagtaggca 10552748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 289
Target Start/End: Original strand, 18922075 - 18922173
Alignment:
Q  191 ttgtaaatattgttgtaactctgttttgtttttggtgtttcttccttgacattccttgtgctaggaaggccattgttgtgttaatataattcattttag 289  Q
    |||||| ||||| |||||  |||| |||  |||||||||||||||||  ||  ||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  18922075 ttgtaattattgatgtaatactgtgttgactttggtgtttcttccttagcacacctagtgctaggaaggccaatgttgtgttaatatatttcattttag 18922173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 42527410 - 42527352
Alignment:
Q  60 caagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggctta 118  Q
    |||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||||    
T  42527410 caagtggttgaaggtgaaattttctactcttccttccaattatcatggttggtggctta 42527352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 25130512 - 25130444
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgtt 125  Q
    ||||| ||||||||||| ||| |||||||||||| |  |||||||||||||||||||||||||| ||||    
T  25130512 tttcatgtggttgaaggagaaatttgctactctttccctcaactatcatggttggtggcttagtccgtt 25130444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 11131253 - 11131178
Alignment:
Q  62 agtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattagg 137  Q
    |||||||||||||||||||||  |||||||| || || ||||||||||||||||||||| | ||  ||||||||||    
T  11131253 agtggttgaaggtgaagtttgtcactcttccctttaattatcatggttggtggcttagtccttttactttattagg 11131178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 13137114 - 13137176
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgtt 125  Q
    ||||||||||||||| ||||||||||||   ||||| ||||||||||||||||||||| ||||    
T  13137114 gtggttgaaggtgaaatttgctactcttttcttcaattatcatggttggtggcttagtccgtt 13137176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 287
Target Start/End: Complemental strand, 42527294 - 42527192
Alignment:
Q  186 ttgcattgtaaatattgttgtaactctgttttgtttttggtgtttcttccttgacattccttgtgctaggaaggcc-attgttgtgttaatataattcat 284  Q
    |||| |||||||||||| | | ||| ||| |||  |||||||||||||||||||||  ||||||||||||||||||  ||| |||  |||||||||||||    
T  42527294 ttgccttgtaaatattgattttactttgtattgactttggtgtttcttccttgacacaccttgtgctaggaaggccttttgatgtagtaatataattcat 42527195  T
Q  285 ttt 287  Q
    |||    
T  42527194 ttt 42527192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 52578018 - 52578080
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgtt 125  Q
    ||||||||||||||||||||   ||||||| ||||| ||||||||||||||||||||| ||||    
T  52578018 gtggttgaaggtgaagtttgtatctcttcccttcaattatcatggttggtggcttagtgcgtt 52578080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 139
Target Start/End: Complemental strand, 54870889 - 54870807
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggca 139  Q
    |||||||||||| || ||||||||||  |||||||| || || ||||||||||||||||||||| ||||  ||||| ||||||    
T  54870889 tttcaagtggttaaatgtgaagtttgtaactcttccctttaattatcatggttggtggcttagtccgtttactttactaggca 54870807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 289
Target Start/End: Complemental strand, 30739586 - 30739358
Alignment:
Q  61 aagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggcacatactaatttatgttgtttc 160  Q
    ||||||||||||||||||| |||  ||||||| || || |||||||||||||||  |||| | ||| |||||||||||| |   |||  | ||| || ||    
T  30739586 aagtggttgaaggtgaagtatgcatctcttccctttaattatcatggttggtggaatagtcctttcactttattaggcataggttaaactttgtagtctc 30739487  T
Q  161 gtgagctgttttgaggtgatggctcttgcattgtaaatattgttgtaactctgttttgtttttggtgtttcttccttgacattccttgtgctaggaaggc 260  Q
     |  ||||||||  |||| ||| | |    |||||| ||||| |||||  |||| |||  |||| ||||||||||||  ||  ||| ||| |||||||||    
T  30739486 ctttgctgttttttggtgctggttttgatcttgtaattattgatgtaatactgtgttgagtttgatgtttcttccttagcacacctagtggtaggaaggc 30739387  T
Q  261 cattgttgtgttaatataattcattttag 289  Q
    || ||||||||||||||| ||||||||||    
T  30739386 caatgttgtgttaatatatttcattttag 30739358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 40153990 - 40153935
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggctta 118  Q
    ||||||||||||||| ||||||| |||||| || ||||||||| ||||||||||||    
T  40153990 gtggttgaaggtgaaatttgctaatcttccctttaactatcatagttggtggctta 40153935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 13137265 - 13137343
Alignment:
Q  212 tgttttgtttttggtgtttcttccttgacattccttgtgctaggaaggccatt-gttgtgttaatataattcattttag 289  Q
    |||||||| |||||||||||||||| | ||   |||||||||||||| || || |||||| ||||||||||||||||||    
T  13137265 tgttttgtctttggtgtttcttcctcggcacatcttgtgctaggaagaccttttgttgtggtaatataattcattttag 13137343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 27270077 - 27270014
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    ||||| ||||||||||| ||| ||| || | ||||| ||||| |||||||||||||||||||||    
T  27270077 tttcatgtggttgaaggcgaaatttccttcacttcccttcaattatcatggttggtggcttagt 27270014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 29969878 - 29969941
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttc 126  Q
    ||||||||||| ||| ||| |||||||||| ||| ||| | ||||||||||||||||| |||||    
T  29969878 gtggttgaaggcgaaatttactactcttcccttctacttttatggttggtggcttagtccgttc 29969941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 30972459 - 30972396
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    ||||| |||| |||||| ||| ||| || ||||||| |||||||||||||| ||||||||||||    
T  30972459 tttcatgtggctgaaggcgaaatttccttctcttcccttcaactatcatggctggtggcttagt 30972396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 43001743 - 43001806
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttc 126  Q
    ||||||||||| ||||||| ||||||||| |||||| ||||||   |||||||||||| |||||    
T  43001743 gtggttgaaggcgaagtttactactcttcatttcaattatcatatgtggtggcttagtccgttc 43001806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 18921944 - 18922022
Alignment:
Q  61 aagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggca 139  Q
    ||||||||||||||||||| |||  ||||||| || || ||||||||||||| |  |||| | ||| ||||||||||||    
T  18921944 aagtggttgaaggtgaagtatgcatctcttccctttaattatcatggttggttgactagtcctttcactttattaggca 18922022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 42790548 - 42790594
Alignment:
Q  244 ccttgtgctaggaaggccattgttgtgttaatataattcattttagt 290  Q
    ||||||||||||||| || | |||||| |||||||||||||||||||    
T  42790548 ccttgtgctaggaagaccttcgttgtggtaatataattcattttagt 42790594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 48336988 - 48337070
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggca 139  Q
    ||||| ||||||||||| ||| ||| || ||||||| |||||  ||||| |||||||| ||||||| ||| || |||||||||    
T  48336988 tttcatgtggttgaaggcgaaatttccttctcttcccttcaatcatcatagttggtggtttagttcattcactatattaggca 48337070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 21204969 - 21204904
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttc 122  Q
    ||||| ||||||||| | ||| ||| || | ||||| ||||| |||||||||||||||||||||||    
T  21204969 tttcatgtggttgaatgcgaaattttcttcacttcccttcaattatcatggttggtggcttagttc 21204904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 53650498 - 53650441
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    ||||||||||| ||||||| |||| ||||||||||| || |||| ||| |||||||||    
T  53650498 gtggttgaaggcgaagtttactacccttcctttcaattaccatgcttgatggcttagt 53650441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 8815548 - 8815615
Alignment:
Q  224 ggtgtttcttccttgacattccttgtgctaggaaggcc--attgttgtgttaatataattcattttag 289  Q
    ||||||||||||||  || |||||||||||||||||||   ||||| || ||||||| ||||||||||    
T  8815548 ggtgtttcttccttagcactccttgtgctaggaaggcctatttgttatggtaatatatttcattttag 8815615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 29521759 - 29521703
Alignment:
Q  58 ttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtgg 114  Q
    |||| ||||||||||| ||| | |||| ||||||||||||| ||||||| |||||||    
T  29521759 ttcatgtggttgaaggcgaaatgtgcttctcttcctttcaattatcatgattggtgg 29521703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 45637625 - 45637691
Alignment:
Q  224 ggtgtttcttccttgacattccttgtgctaggaaggcc--attgttgtgttaatataattcattttag 289  Q
    ||||||||||||||  ||  ||||||||||||||||||  ||||||||| |||||| |||||||||||    
T  45637625 ggtgtttcttccttagcacaccttgtgctaggaaggcctgattgttgtggtaatat-attcattttag 45637691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 40616804 - 40616723
Alignment:
Q  58 ttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggca 139  Q
    |||||||||||||||||||||| |||||||||||| || ||||||| |||||||||||||||| ||||| ||||| ||||||    
T  40616804 ttcaagtggttgaaggtgaagtatgctactcttccctttaactatcttggttggtggcttagtccgttcactttactaggca 40616723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 27854911 - 27854972
Alignment:
Q  58 ttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttag 119  Q
    |||||||||||||||||||||| |||||| ||||| || |||||||||||||||||||||||    
T  27854911 ttcaagtggttgaaggtgaagtatgctacccttccctttaactatcatggttggtggcttag 27854972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 38342992 - 38343053
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggctta 118  Q
    |||||||||||||||||||||| |||  |||||||| || ||||||||||||||||| ||||    
T  38342992 tttcaagtggttgaaggtgaagcttgtaactcttccctttaactatcatggttggtgactta 38343053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 288
Target Start/End: Complemental strand, 24904990 - 24904921
Alignment:
Q  221 tttggtgtttcttccttgacattccttgtgctaggaaggccatt--gttgtgttaatataattcatttta 288  Q
    |||||||||||||||||  ||  |||||||||||||||||||||  |||| ||||||||| |||||||||    
T  24904990 tttggtgtttcttccttagcacaccttgtgctaggaaggccatttggttgagttaatatatttcatttta 24904921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 40348008 - 40348068
Alignment:
Q  58 ttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggctta 118  Q
    |||| ||||||||||| ||||||| |   |||||||||||||||||||||||| |||||||    
T  40348008 ttcatgtggttgaaggcgaagtttccatttcttcctttcaactatcatggttgatggctta 40348068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 27855099 - 27855146
Alignment:
Q  244 ccttgtgctaggaaggccattgttgtgttaatataattcattttagtt 291  Q
    ||||||||||||||| || | |||||| ||||||||||||||||||||    
T  27855099 ccttgtgctaggaagaccttagttgtggtaatataattcattttagtt 27855146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 34871594 - 34871657
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    |||| ||||||||||||||||||||| |  ||||| ||| ||||||||| | ||||||||||||    
T  34871594 tttccagtggttgaaggtgaagtttgttcatcttctttttaactatcataggtggtggcttagt 34871657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 27076600 - 27076662
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttag 119  Q
    ||||| ||||| ||||| ||||||| |  || |||| ||||||||||||||||||||||||||    
T  27076600 tttcaggtggtagaaggcgaagtttccatctattcccttcaactatcatggttggtggcttag 27076662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 27201701 - 27201639
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttag 119  Q
    ||||| ||||| ||||| ||||||| |  || |||| ||||||||||||||||||||||||||    
T  27201701 tttcaggtggtagaaggcgaagtttccatctattcccttcaactatcatggttggtggcttag 27201639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 29374769 - 29374715
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggctt 117  Q
    ||||||||||| ||||||| || |||||| | ||||||||||||| |||||||||    
T  29374769 gtggttgaaggcgaagtttccttctcttcatctcaactatcatggctggtggctt 29374715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 17116468 - 17116411
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    ||||||||||| ||| | |||| ||||||| ||||  |||||||||||||||||||||    
T  17116468 gtggttgaaggcgaaatatgcttctcttcccttcagttatcatggttggtggcttagt 17116411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 38153939 - 38153996
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    ||||||||||||||| ||| |||||||||| || ||||| ||| | ||||||||||||    
T  38153939 gtggttgaaggtgaaatttcctactcttccctttaactaccatagatggtggcttagt 38153996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 8e-21; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 67 - 288
Target Start/End: Original strand, 50039686 - 50039904
Alignment:
Q  67 ttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggcacatactaatttatgttgtttcgtgagc 166  Q
    ||||||||||||| |||||||||||| || || |||   ||||||||| ||||| ||||| |||||| ||||| |   |||| | ||| || || |  ||    
T  50039686 ttgaaggtgaagtatgctactcttccctttaattat---ggttggtggattagtccgttcactttatgaggcataggataatctctgtagtctcctttgc 50039782  T
Q  167 tgttttgaggtgatggctcttgcattgtaaatattgttgtaactctgttttgtttttggtgtttcttccttgacattccttgtgctaggaaggccattgt 266  Q
    ||||||  ||||  ||||||||| ||| || ||||| ||| |  |||| |||| |||||||||||||||||  ||  ||| ||||||||||||| |||||    
T  50039783 tgttttttggtgcaggctcttgccttgcaattattgatgtcatactgtgttgtctttggtgtttcttccttagcacacctagtgctaggaaggcgattgt 50039882  T
Q  267 tgtgttaatataattcatttta 288  Q
    |||||||||||| |||||||||    
T  50039883 tgtgttaatatatttcatttta 50039904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 203
Target Start/End: Original strand, 12688210 - 12688353
Alignment:
Q  61 aagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggcacatactaatttatgttgtt-t 159  Q
    ||||||||||||||||||||| | |||||||| || ||||||||||| |||||||||||| ||||  ||||| |||||| || ||||||| ||| ||| |    
T  12688210 aagtggttgaaggtgaagtttccaactcttccctttaactatcatggatggtggcttagtccgtttactttactaggcatatgctaatttctgtagttat 12688309  T
Q  160 cgtgagctgttttgaggtgatggctcttgcattgtaaatattgt 203  Q
    | || | || |||| ||||   ||||||||||||||| ||||||    
T  12688310 cttggggtgctttgtggtgcaagctcttgcattgtaattattgt 12688353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 5411767 - 5411835
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgtt 125  Q
    ||||||||||||||||||||||||||  |||||||| || |||||||||||||| ||||||||| ||||    
T  5411767 tttcaagtggttgaaggtgaagtttgtaactcttccctttaactatcatggttgttggcttagtccgtt 5411835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 28442216 - 28442136
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattagg 137  Q
    |||| |||||||||||||||||||||   ||||||| || |||||||||||||||||||||||| | ||  ||||||||||    
T  28442216 tttccagtggttgaaggtgaagtttgtctctcttccctttaactatcatggttggtggcttagtccatttactttattagg 28442136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 28400523 - 28400586
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    |||| ||||| |||||||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  28400523 tttccagtggatgaaggtgaagtttgtcactcttccttttaactatcatgggtggtggcttagt 28400586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 26260785 - 26260842
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    ||||||||||| |||||||||| ||||||| ||||| |||||||| ||||||||||||    
T  26260785 gtggttgaaggcgaagtttgcttctcttcccttcaattatcatgggtggtggcttagt 26260842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 48973679 - 48973747
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgtt 125  Q
    |||||||||||| |||||||||||||  |||||||| || || |||||||| |||||||||||| ||||    
T  48973679 tttcaagtggttaaaggtgaagtttgtaactcttccctttaattatcatgggtggtggcttagtccgtt 48973747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 5958391 - 5958336
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggctta 118  Q
    ||||||||||||||| ||||||||| |||| || ||||||||||| ||||||||||    
T  5958391 gtggttgaaggtgaaatttgctacttttccctttaactatcatggatggtggctta 5958336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 6723776 - 6723713
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttc 126  Q
    |||||||||||||||||||  ||||| ||||||||| | |||||| |||||||||||| |||||    
T  6723776 gtggttgaaggtgaagtttaatactcctcctttcaattttcatggatggtggcttagtccgttc 6723713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 44675124 - 44675191
Alignment:
Q  58 ttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgtt 125  Q
    |||| ||||||||||| ||| |||||| | ||||| ||||| ||||||||||||||||||||| ||||    
T  44675124 ttcatgtggttgaaggcgaaatttgcttcccttcccttcaattatcatggttggtggcttagtccgtt 44675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 290
Target Start/End: Original strand, 45718365 - 45718595
Alignment:
Q  61 aagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggcacatactaatttatgttgtttc 160  Q
    |||||| ||||| |||| ||||| |||||||| || || ||||||||||||||||||||  ||||  ||||| |||||| | |||||||| |||  | |     
T  45718365 aagtggctgaagatgaaatttgccactcttccctttaattatcatggttggtggcttag-ccgtttactttactaggcatagactaatttctgtaatgtt 45718463  T
Q  161 gtgagctgttttgaggtgatggctcttgcattgtaaatattgttgtaactctgttttg--tttttggtgtttcttccttgacattccttgtgctaggaag 258  Q
     || | || |||| |||  ||||||  || ||||||||| |||| | ||| ||| | |  |||  ||| ||| ||||||||||  |||| ||||| ||||    
T  45718464 atgggttgatttgtggtactggctcacgccttgtaaatagtgtttttactttgtatcgactttgaggtttttattccttgacacaccttatgctaagaag 45718563  T
Q  259 gccattgttgtgttaatataattcattttagt 290  Q
    ||  |||||||||||||||| |||||||||||    
T  45718564 gcatttgttgtgttaatatatttcattttagt 45718595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 291
Target Start/End: Complemental strand, 28442026 - 28441979
Alignment:
Q  244 ccttgtgctaggaaggccattgttgtgttaatataattcattttagtt 291  Q
    |||||||||||||||||| |||||||| |||||||  |||||||||||    
T  28442026 ccttgtgctaggaaggcctttgttgtggtaatatatctcattttagtt 28441979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 34703547 - 34703484
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttc 126  Q
    ||||||||||| ||| | ||| |||||||| || |||| ||||||||||||||| |||||||||    
T  34703547 gtggttgaaggcgaaatatgcaactcttccctttaactttcatggttggtggctaagttcgttc 34703484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 48973868 - 48973915
Alignment:
Q  244 ccttgtgctaggaaggccattgttgtgttaatataattcattttagtt 291  Q
    |||||||||||||||||| | | |||||||||||| ||||||||||||    
T  48973868 ccttgtgctaggaaggccttaggtgtgttaatatatttcattttagtt 48973915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 9484879 - 9484936
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    ||||||||||| ||| |||| | ||||||| ||||| ||||||||||||||| |||||    
T  9484879 gtggttgaaggcgaaatttgtttctcttcccttcaattatcatggttggtggtttagt 9484936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 2653627 - 2653561
Alignment:
Q  224 ggtgtttcttccttgacattccttgtgctaggaaggcc--attgttgtgttaatataattcattttag 289  Q
    ||||||||||||||  ||  ||||||||||||||||||  ||||||||| |||||| |||||||||||    
T  2653627 ggtgtttcttccttagcacaccttgtgctaggaaggcctgattgttgtggtaatat-attcattttag 2653561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 52251539 - 52251606
Alignment:
Q  224 ggtgtttcttccttgacattccttgtgctaggaaggcc--attgttgtgttaatataattcattttag 289  Q
    ||||||||||||||  || |||||||||||||||||||   ||||||||  |||||| ||||||||||    
T  52251539 ggtgtttcttccttagcactccttgtgctaggaaggccgttttgttgtgggaatatatttcattttag 52251606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 8e-18; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 19979349 - 19979287
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttag 119  Q
    ||||||||||||||||||||||||||  |||||||| || |||||||||||||||||||||||    
T  19979349 tttcaagtggttgaaggtgaagtttgtaactcttccctttaactatcatggttggtggcttag 19979287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 22534031 - 22534094
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    |||| |||||||||||||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  22534031 tttccagtggttgaaggtgaagtttgtcactcttccttttaactatcatgggtggtggcttagt 22534094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 29542458 - 29542395
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    |||| |||||||||||||||||||||  |||||||| || ||||||||||||||||||||||||    
T  29542458 tttccagtggttgaaggtgaagtttgtcactcttccctttaactatcatggttggtggcttagt 29542395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 41878720 - 41878783
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    |||| |||||||||||||||||||||  |||||||| || ||||||||||||||||||||||||    
T  41878720 tttccagtggttgaaggtgaagtttgtcactcttccctttaactatcatggttggtggcttagt 41878783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 42806354 - 42806297
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  42806354 gtggttgaaggtgaagtttgtcactcttccttttaactatcatgggtggtggcttagt 42806297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 290
Target Start/End: Original strand, 25408927 - 25409027
Alignment:
Q  193 gtaaatattgttgtaactctgttttgtttttggtgtttcttccttgacattccttgtgctaggaaggcc---attgttgtgttaatataattcattttag 289  Q
    |||||||||| |  |||||||||| | ||||||||||||||||| ||||  |||||||| |||||||||    |||||||| ||||||| ||||||||||    
T  25408927 gtaaatattgattaaactctgtttagattttggtgtttcttcctcgacacaccttgtgcaaggaaggccttttttgttgtgataatatatttcattttag 25409026  T
Q  290 t 290  Q
    |    
T  25409027 t 25409027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 47161020 - 47161078
Alignment:
Q  61 aagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttag 119  Q
    ||||||||||||||||||||| || ||||||| ||||| || |||||||||||||||||    
T  47161020 aagtggttgaaggtgaagtttccttctcttccattcaattaccatggttggtggcttag 47161078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 45967037 - 45966984
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggct 116  Q
    |||||||||||||| | | ||| |||||||||||||||||||||||||||||||    
T  45967037 gtggttgaaggtgaggatcgcttctcttcctttcaactatcatggttggtggct 45966984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 139
Target Start/End: Complemental strand, 53876952 - 53876870
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggca 139  Q
    |||||||||||| |||||||||||||  |||||||| || || |||||||| ||||||||| || ||||  ||||| ||||||    
T  53876952 tttcaagtggttaaaggtgaagtttgtaactcttccctttaattatcatgggtggtggcttggtccgtttactttactaggca 53876870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 6925982 - 6926047
Alignment:
Q  60 caagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgtt 125  Q
    ||||||||| |||||||||||||  |||||||| || || |||||||| |||||||||||| ||||    
T  6925982 caagtggttaaaggtgaagtttgtaactcttccctttaattatcatgggtggtggcttagtccgtt 6926047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 44109474 - 44109519
Alignment:
Q  244 ccttgtgctaggaaggccattgttgtgttaatataattcattttag 289  Q
    |||||||||||||||| | |||||||||||||||| ||||||||||    
T  44109474 ccttgtgctaggaaggtctttgttgtgttaatatatttcattttag 44109519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 291
Target Start/End: Complemental strand, 19979160 - 19979112
Alignment:
Q  244 ccttgtgctaggaaggccattgtt-gtgttaatataattcattttagtt 291  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  19979160 ccttgtgctaggaaggcctttgtttgtgttaatatatttcattttagtt 19979112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 22534222 - 22534269
Alignment:
Q  244 ccttgtgctaggaaggccattgttgtgttaatataattcattttagtt 291  Q
    |||||||||||||||||| |||||||| |||||||  |||||||||||    
T  22534222 ccttgtgctaggaaggcctttgttgtggtaatatatctcattttagtt 22534269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 25845676 - 25845739
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagt 120  Q
    ||||| ||||||||||| ||||||| || |||| || || ||||| ||||||||||||||||||    
T  25845676 tttcatgtggttgaaggcgaagtttccttctctgcccttgaactaccatggttggtggcttagt 25845739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 36803192 - 36803255
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttc 126  Q
    ||||||||||| ||||||| | ||| |||||||||| | ||||| ||||||||||||| |||||    
T  36803192 gtggttgaaggcgaagtttaccactattcctttcaattttcatgcttggtggcttagtccgttc 36803255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 37537293 - 37537238
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggctta 118  Q
    |||||||||||||||||| ||| ||||||| || |  |||||||||||||||||||    
T  37537293 gtggttgaaggtgaagttcgcttctcttccctttacttatcatggttggtggctta 37537238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 3694634 - 3694563
Alignment:
Q  220 ttttggtgtttcttccttgacattccttgtgctaggaaggcc--attgttgtgttaatataattcattttag 289  Q
    ||||||||||||||||||  ||  ||||||||||||||| ||  |||| |||| ||||||| ||||||||||    
T  3694634 ttttggtgtttcttccttagcacaccttgtgctaggaagaccttattgatgtggtaatatatttcattttag 3694563  T

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Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 6894221 - 6894289
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgtt 125  Q
    |||||| |||||||||| || ||||   |||||||| ||||| ||||||||||||||| ||||| ||||    
T  6894221 tttcaaatggttgaaggcgaggtttataactcttcccttcaattatcatggttggtggattagtccgtt 6894289  T

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Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 33692965 - 33692909
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttag 119  Q
    ||||||||||||||| |||   || ||||| ||||||| ||||||||||||||||||    
T  33692965 gtggttgaaggtgaaatttaacacgcttcccttcaactttcatggttggtggcttag 33692909  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 41935754 - 41935714
Alignment:
Q  249 tgctaggaaggccattgttgtgttaatataattcattttag 289  Q
    ||||||||||||| |||| ||||||||||| ||||||||||    
T  41935754 tgctaggaaggcccttgtggtgttaatatatttcattttag 41935714  T

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Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 42806171 - 42806127
Alignment:
Q  244 ccttgtgctaggaaggccattgttgtgttaatataattcatttta 288  Q
    |||||||||||||||||| |||||||| |||||||  ||||||||    
T  42806171 ccttgtgctaggaaggcctttgttgtggtaatatatctcatttta 42806127  T

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Target: scaffold0225 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 6533 - 6601
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgtt 125  Q
    |||||| ||||| |||||||||||| | |||||||| || |||||||||||||||||||| ||| ||||    
T  6533 tttcaattggttaaaggtgaagtttacaactcttccctttaactatcatggttggtggctaagtccgtt 6601  T

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Target: scaffold0204 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 24510 - 24592
Alignment:
Q  57 tttcaagtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggcttagttcgttcgctttattaggca 139  Q
    ||||| ||||||||||| ||| ||| || ||||||| |||||  ||||| |||||||| ||||||| ||| || |||||||||    
T  24510 tttcatgtggttgaaggcgaaatttccttctcttcccttcaatcatcatagttggtggtttagttcattcactatattaggca 24592  T

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Target: scaffold0795 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 2192 - 2245
Alignment:
Q  63 gtggttgaaggtgaagtttgctactcttcctttcaactatcatggttggtggct 116  Q
    |||||||||||||||| | ||| |||| || ||||| |||||||||||||||||    
T  2192 gtggttgaaggtgaagctcgcttctctccccttcaattatcatggttggtggct 2245  T

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