View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2932_low_39 (Length: 266)

Name: NF2932_low_39
Description: NF2932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2932_low_39
NF2932_low_39
[»] chr7 (7 HSPs)
chr7 (77-257)||(48477168-48477350)
chr7 (79-257)||(42786633-42786813)
chr7 (79-253)||(4340314-4340491)
chr7 (74-159)||(3079261-3079346)
chr7 (82-159)||(21959444-21959521)
chr7 (82-156)||(19802018-19802092)
chr7 (74-159)||(3080622-3080707)
[»] chr4 (10 HSPs)
chr4 (79-243)||(4851811-4851977)
chr4 (79-257)||(2895275-2895455)
chr4 (76-254)||(5908265-5908445)
chr4 (82-231)||(5599025-5599176)
chr4 (87-254)||(6735879-6736049)
chr4 (82-159)||(13701736-13701813)
chr4 (82-159)||(13712229-13712306)
chr4 (82-159)||(5579341-5579418)
chr4 (99-159)||(1505136-1505196)
chr4 (82-159)||(31666507-31666586)
[»] chr2 (3 HSPs)
chr2 (86-254)||(2696584-2696754)
chr2 (82-254)||(31347521-31347698)
chr2 (82-156)||(31314417-31314491)
[»] chr1 (8 HSPs)
chr1 (73-243)||(14115691-14115863)
chr1 (78-159)||(15088030-15088111)
chr1 (78-159)||(22210638-22210719)
chr1 (78-159)||(22219388-22219469)
chr1 (79-159)||(22207076-22207156)
chr1 (81-159)||(7898768-7898847)
chr1 (82-159)||(51843718-51843795)
chr1 (82-157)||(44193666-44193741)
[»] chr6 (9 HSPs)
chr6 (82-231)||(33301286-33301437)
chr6 (87-254)||(31113764-31113933)
chr6 (82-159)||(5131558-5131636)
chr6 (82-227)||(6405888-6406036)
chr6 (82-154)||(34256433-34256505)
chr6 (82-159)||(8519050-8519127)
chr6 (82-159)||(28144160-28144237)
chr6 (79-134)||(8706823-8706878)
chr6 (200-253)||(8519171-8519224)
[»] scaffold0046 (1 HSPs)
scaffold0046 (82-254)||(89614-89788)
[»] chr3 (10 HSPs)
chr3 (78-159)||(19440498-19440579)
chr3 (82-158)||(2747311-2747387)
chr3 (82-156)||(14521885-14521959)
chr3 (82-159)||(28034112-28034189)
chr3 (79-159)||(5835055-5835135)
chr3 (82-158)||(37489146-37489222)
chr3 (82-152)||(18110863-18110933)
chr3 (94-159)||(11418187-11418252)
chr3 (82-154)||(19360112-19360184)
chr3 (198-254)||(5938284-5938340)
[»] chr8 (3 HSPs)
chr8 (82-159)||(20811254-20811331)
chr8 (82-154)||(5556895-5556967)
chr8 (82-159)||(4844657-4844732)
[»] scaffold0158 (2 HSPs)
scaffold0158 (82-156)||(230-304)
scaffold0158 (82-156)||(37687-37761)
[»] scaffold0043 (1 HSPs)
scaffold0043 (77-159)||(70367-70449)
[»] scaffold0060 (1 HSPs)
scaffold0060 (87-159)||(45423-45495)
[»] chr5 (2 HSPs)
chr5 (82-154)||(41527650-41527722)
chr5 (213-257)||(37456309-37456353)
[»] scaffold0018 (1 HSPs)
scaffold0018 (79-159)||(66229-66310)


Alignment Details
Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 48477168 - 48477350
Alignment:
Q  77 tttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaac 174  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  ||||||||    
T  48477168 tttgaaacacccctactagaaatcacctaggatatctagcatgtgtgttaaacttggcgtcggatacattaaaattacaataaatagatattctctgaac 48477267  T
Q  175 aaatcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttcatc 257  Q
    |||||||||||||||| |||||||||||| |||||||||||||||| ||||||| ||||||||| |||||||||| |||||||    
T  48477268 aaatcatagaatttcttgcctgttacctccgaaatagttccactgaagtgtactctatatggtcaagctacttcttcttcatc 48477350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 79 - 257
Target Start/End: Complemental strand, 42786813 - 42786633
Alignment:
Q  79 tgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaacaa 176  Q
    |||||||||||| |||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||  ||||||||||    
T  42786813 tgaaacacccctactagaaatcacctaggatatctagcatttgtgttaaacttggcgtcggatacattaaaattacaataaatagatattctctgaacaa 42786714  T
Q  177 atcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttcatc 257  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  42786713 atcatagaatttcttgcctgttacctccgaaatagttccactgacgtgtactctatatggtcaagctacttcttcttcatc 42786633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 79 - 253
Target Start/End: Original strand, 4340314 - 4340491
Alignment:
Q  79 tgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaa---tactctgaaca 175  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||  |||| |||||||||||||||||  |||   |  |||||| |    
T  4340314 tgaaacacccctactagacattacctaggatatctagcatgtgtgttaaacttggcggtggatgcattaaaattacaataataaaaatttcttctgaata 4340413  T
Q  176 aatcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgctt 253  Q
    |   || ||| | |||| ||  |||||| |||||| | ||||||||||| |||||||||| |||||||||||||||||    
T  4340414 agatatggaaatgctcgtcttatacctctgaaataataccactgacgtgaactttatatgatccagctacttctgctt 4340491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 3079346 - 3079261
Alignment:
Q  74 ggttttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||| | ||||||||||||||| ||||||    
T  3079346 ggttttgaaacacccctactagacattacctatgatatctagcatgtgtgttaaacttgacattggatacattaaaatttcaataa 3079261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 21959521 - 21959444
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||    
T  21959521 aacacccctactagaaatttcctaggatatctagcatgtgtgttaaacttggcattggatacattaaaattacaataa 21959444  T

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Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 19802018 - 19802092
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaa 156  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||    
T  19802018 aacacccctactagaaattacctaggatatctagcatgagtgttaaacttgacaatggatacattaaaattacaa 19802092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 3080622 - 3080707
Alignment:
Q  74 ggttttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||||||| | | ||||||||||||||| ||||||    
T  3080622 ggttttgaaacacccctactagacattacctatgatatctagcatgtgtgtgaaacttggcattggatacattaaaatttcaataa 3080707  T

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Target: chr4 (Bit Score: 128; Significance: 3e-66; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 79 - 243
Target Start/End: Original strand, 4851811 - 4851977
Alignment:
Q  79 tgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaacaa 176  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||    
T  4851811 tgaaacacccctactagaaatcacctaggatatctagcatgtgtgttaaacttggcgtcggatacattaaaattacaataaataaatattctctgaacaa 4851910  T
Q  177 atcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagct 243  Q
    ||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  4851911 atcattgaatttctcgcgtgttacctcagaaatagttccactaacgtgtactttatatggtcaagct 4851977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 79 - 257
Target Start/End: Complemental strand, 2895455 - 2895275
Alignment:
Q  79 tgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaacaa 176  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  ||||||||||    
T  2895455 tgaaacacccctactagaaatcacctaggatatctagcatgtgtgttaaacttggcgtcggatacattaaaattacaataaatagatattctctgaacaa 2895356  T
Q  177 atcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttcatc 257  Q
    |||||||||||||| |||| |||||||  ||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  2895355 atcatagaatttcttgcctattacctccaaaatagttccactgacgtgtactctatatggtcaagctacttcttcttcatc 2895275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 76 - 254
Target Start/End: Original strand, 5908265 - 5908445
Alignment:
Q  76 ttttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaa 173  Q
    ||||||||||||| | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||  |||||||    
T  5908265 ttttgaaacacccttactagaaatcacctaggatatctagcatgtgtgttaaacttggcgtcggatacattaaaattataataaatagatattctctgaa 5908364  T
Q  174 caaatcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttc 254  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||||||||||| ||||||||| |||||||||| ||||    
T  5908365 caaatcatagaatttcttgcatgttacctccgaaatagttccactgacgtgtactctatatggtcaagctacttcttcttc 5908445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 82 - 231
Target Start/End: Original strand, 5599025 - 5599176
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaacaaatc 179  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| |||||  |||||||||||||    
T  5599025 aacacccctactagaaatcacctaggatatctagcatgtgtgttaaacttggcgtcggatacattgaagttacaataaagaaatattctctgaacaaatc 5599124  T
Q  180 atagaatttctcgcctgttacctcagaaatagttccactgacgtgtacttta 231  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  5599125 atagaatttctcgcctattacctcagaaatagttccactaacgtgtacttta 5599176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 87 - 254
Target Start/End: Complemental strand, 6736049 - 6735879
Alignment:
Q  87 ccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaa---tactctgaacaaatcatag 183  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||  |||   | || |||  ||  |||||    
T  6736049 ccctactagaaattacctaggatatctagcatgtgtgttaaatttggcattggatacattaaaattacaataataaaaatttcctatgattaagacatag 6735950  T
Q  184 aatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttc 254  Q
    || |||||| ||  |||||| |||||| | ||| |||| || ||||||||||||||| | |||||||||||    
T  6735949 aaattctcgtcttatacctctgaaataataccagtgacttgaactttatatggtccaacaacttctgcttc 6735879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 13701736 - 13701813
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||    
T  13701736 aacaccccgactagaaatttcctaggatatctagcatgtgtgttaaacttggcattggatacattaaaattacaataa 13701813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 13712229 - 13712306
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||    
T  13712229 aacaccccgactagaaatttcctaggatatctagcatgtgtgttaaacttggcattggatacattaaaattacaataa 13712306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 5579418 - 5579341
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||| ||||||||| |||||||||||||||||||||| |||| ||| | | | ||| ||||||||||||||||    
T  5579418 aacacccctactagaaatttcctaggatatctagcatgtgtgctaaatttggcattgaatatattaaaattacaataa 5579341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 1505136 - 1505196
Alignment:
Q  99 ttacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    |||||||||||||||||||||||||||||| ||| | | ||||||| ||||||||||||||    
T  1505136 ttacctaggatatctagcatgtgtgttaaatttggcattggatacactaaaattacaataa 1505196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 31666586 - 31666507
Alignment:
Q  82 aacacccctgctagaaattacctaggat--atctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||| ||||||||||||||||||  ||||||||| | ||||||||||| | | |||||||||||||||| |||||    
T  31666586 aacacccctactagaaattacctaggatttatctagcatttatgttaaacttggcattggatacattaaaattagaataa 31666507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 2e-61; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 86 - 254
Target Start/End: Complemental strand, 2696754 - 2696584
Alignment:
Q  86 cccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaacaaatcatag 183  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||  |||||||||||||||||    
T  2696754 cccctactagaaatcacctaggatatctaggatgtgtgttaaacttggcgtcggatacattgaagttacaataaataaatattctctgaacaaatcatag 2696655  T
Q  184 aatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttc 254  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||    
T  2696654 aatttctcgcctattacctcagaaatagttccactgacgtgtactttacatagtccagctacatctgcttc 2696584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 254
Target Start/End: Complemental strand, 31347698 - 31347521
Alignment:
Q  82 aacacccctgctagaaattacctaggat--atctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaa---tactctgaacaa 176  Q
    ||||||||| ||||||||||||||||||  ||||||||| ||||||||| ||| | | |||||||||||||||| |||||  |||   | ||||||| ||    
T  31347698 aacacccctactagaaattacctaggatttatctagcatttgtgttaaagttggcattggatacattaaaattagaataatcaaaacttcctctgaataa 31347599  T
Q  177 atcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttc 254  Q
       || ||| |||||| ||  || ||| |||||| | ||||||||||| ||||||||||||||||| |||||||||||    
T  31347598 gatatggaagttctcgtcttataactctgaaataataccactgacgtgaactttatatggtccagcgacttctgcttc 31347521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 31314417 - 31314491
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaa 156  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||||||||| |   |||||||||||||||||||    
T  31314417 aacacccctactagaaatttcctaggatatctagcatgagtgttaaacttggcaatggatacattaaaattacaa 31314491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 7e-58; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 73 - 243
Target Start/End: Complemental strand, 14115863 - 14115691
Alignment:
Q  73 gggttttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctct 170  Q
    ||||| |||||||||| | |||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||  || |    
T  14115863 gggttgtgaaacacccatactagaaatcacctaggatatctagcatgtgtgttaaacttggcatcggatacattaaaattacaataaataaatattcttt 14115764  T
Q  171 gaacaaatcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagct 243  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||||||| ||||    
T  14115763 gaacaaatcatagaatttctcgcatgttacctaagaaatagttccactaacgtgtattttatatggtcaagct 14115691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 15088030 - 15088111
Alignment:
Q  78 ttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||    
T  15088030 ttgaaacacccctactagacattacctaggatatctagcatgtgtgttaaacttggcattggatacattaaaatttcaataa 15088111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 22210638 - 22210719
Alignment:
Q  78 ttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||    
T  22210638 ttgaaacacccctactagacattacctaggatatctagcatgtgtgttaaacttggcattggatacattaaaatttcaataa 22210719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 22219388 - 22219469
Alignment:
Q  78 ttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||    
T  22219388 ttgaaacacccctactagacattacctaggatatctagcatgtgtgttaaacttggcattggatacattaaaatttcaataa 22219469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 22207076 - 22207156
Alignment:
Q  79 tgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||    
T  22207076 tgaaacacccctactagacattacctaggatatctagcatgtgtgttaaacttggcattggatacattaaaatttcaataa 22207156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 159
Target Start/End: Original strand, 7898768 - 7898847
Alignment:
Q  81 aaacacccctgctagaaatt-acctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||    
T  7898768 aaacacccctactagaaatttacctaggatatctagcatgtgtgttaaatttggcattggatacattaaaattacaataa 7898847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 51843718 - 51843795
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||| | ||||| ||||||||||||||||||| |||||||||||||||   | ||||||||||||||||||||||    
T  51843718 aacacccttactagacattacctaggatatctagcgtgtgtgttaaacttggtattggatacattaaaattacaataa 51843795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 44193741 - 44193666
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaat 157  Q
    ||||||||| ||||| ||| |||| ||||||||| | |||||||||||||| | | |||||| |||||||||||||    
T  44193741 aacacccctactagacatttcctaagatatctagtacgtgtgttaaacttggcattggatactttaaaattacaat 44193666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 7e-55; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 82 - 231
Target Start/End: Complemental strand, 33301437 - 33301286
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaacaaatc 179  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||  || ||||||||||    
T  33301437 aacacccctactagaaatcacctaggatatctagcatgtgtgttaaacttggcgttggatacattgaagttacaataaataaatattctatgaacaaatc 33301338  T
Q  180 atagaatttctcgcctgttacctcagaaatagttccactgacgtgtacttta 231  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33301337 atagaatttctcgcctattacctcagaaatagttccactgacgtgtacttta 33301286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 87 - 254
Target Start/End: Complemental strand, 31113933 - 31113764
Alignment:
Q  87 ccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaatt---acaataaataaatactctgaacaaatcatag 183  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||   |||||||| |||| ||||||| ||| |||||    
T  31113933 ccctactagaaattacctaggatatctagcatgtgtgttaaacttggcattggatacattaaaattacaacaataaaaaaattctctgaataaaacatag 31113834  T
Q  184 aatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttc 254  Q
    ||  |||||  |  ||||||  ||||| |  || ||||||| ||||||||||||||| | |||||||||||    
T  31113833 aa-atctcgtattatacctctaaaataatatcaatgacgtgaactttatatggtccaacaacttctgcttc 31113764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 5131636 - 5131558
Alignment:
Q  82 aacacccctgctagaaatt-acctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||    
T  5131636 aacacccctactagaaatttacctaggatatctagcatgtgtgttaaatttggcattggatacattaaaattacaataa 5131558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 227
Target Start/End: Original strand, 6405888 - 6406036
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaa---tactctgaacaaat 178  Q
    ||||||| | ||||||||||| |||||||||||||||||| |||||||||| |    ||||||||||||||||||||| ||||   | ||||||||||||    
T  6405888 aacacccatactagaaattacataggatatctagcatgtgcgttaaacttggcacttgatacattaaaattacaataattaaaaatttctctgaacaaat 6405987  T
Q  179 catagaatttctcgcctgttacctcagaaatagttccactgacgtgtac 227  Q
     |||||||| ||||  || |||||| | |||||| |||||  |||||||    
T  6405988 tatagaattactcgtttgatacctctggaatagtaccactagcgtgtac 6406036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 34256505 - 34256433
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattac 154  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| |   |||||||||||||||||    
T  34256505 aacacccctactagaaattacctaggatatctagcatgagtgttaaacttggcaatggatacattaaaattac 34256433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 8519050 - 8519127
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||||| |   |||||||||||||| |||||||    
T  8519050 aacacccctactagacattacctaggatatctagcatgcgtgttaaacttggcagtggatacattaaaatcacaataa 8519127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 28144160 - 28144237
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||| ||||||||| |||| |||||||||||||| ||||||| ||| | | ||||||||||||||||||||||    
T  28144160 aacacccctactagaaatttcctatgatatctagcatgtatgttaaaattggcattggatacattaaaattacaataa 28144237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 8706878 - 8706823
Alignment:
Q  79 tgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgac 134  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  8706878 tgaaacacccctactagaaatcacctaggatatctagcatgagtgttaaacttgac 8706823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 8519171 - 8519224
Alignment:
Q  200 cctcagaaatagttccactgacgtgtactttatatggtccagctacttctgctt 253  Q
    |||| |||||| | ||||||||||| ||||||||||||||||||| || |||||    
T  8519171 cctctgaaataataccactgacgtgaactttatatggtccagctatttttgctt 8519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 82 - 254
Target Start/End: Original strand, 89614 - 89788
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaacaaatc 179  Q
    ||||||||| |||||||||  ||||||||||||||||||| ||||||||||     ||||||||||||||||||||||||||| |  |||||||||||||    
T  89614 aacacccctactagaaattttctaggatatctagcatgtgcgttaaacttggtactggatacattaaaattacaataaataaaaattctctgaacaaatc 89713  T
Q  180 atagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttc 254  Q
    |||||||||||||| |||||||||||||||||| |||| |||||||||||||||| |||||||||| | ||||||    
T  89714 atagaatttctcgcttgttacctcagaaatagtaccaccgacgtgtactttatatagtccagctacgtttgcttc 89788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 19440498 - 19440579
Alignment:
Q  78 ttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| | | || |||||||||||||||||||    
T  19440498 ttgaaacatccctgctagaaattacctaggatatctagcgtgtgtgttaaacttggcattgggtacattaaaattacaataa 19440579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 2747387 - 2747311
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaata 158  Q
    ||||||||| |||||||||||||||||||||||| |||| ||||||||||| | | |||||||||||||||||||||    
T  2747387 aacacccctactagaaattacctaggatatctagaatgtatgttaaacttggcattggatacattaaaattacaata 2747311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 14521959 - 14521885
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaa 156  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| |   |||||||||||||||||||    
T  14521959 aacacccctactagaaattacctaggatatctagcatgagtgttaaacttggcaatggatacattaaaattacaa 14521885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 28034112 - 28034189
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||| ||||||||| || |||||||||||||||||||||||| ||| | | ||||||||||||||||||||||    
T  28034112 aacacccctactagaaatttccaaggatatctagcatgtgtgttaaaattggcattggatacattaaaattacaataa 28034189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 5835055 - 5835135
Alignment:
Q  79 tgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    |||||||||||| ||| |||||||||||||||||||||||| || ||||||||| | | ||||||||||||||||| ||||    
T  5835055 tgaaacacccctactataaattacctaggatatctagcatgagtattaaacttggcattggatacattaaaattaccataa 5835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 37489146 - 37489222
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaata 158  Q
    ||||||||| ||| || || ||||||||||||||||||||||||||||||| | | |||||||||||||||||||||    
T  37489146 aacacccctactaaaattttcctaggatatctagcatgtgtgttaaacttggcattggatacattaaaattacaata 37489222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 18110863 - 18110933
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaatt 152  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||||||||| |   |||||||||||||||    
T  18110863 aacacccctactagaaatttcctaggatatctagcatgagtgttaaacttggcaatggatacattaaaatt 18110933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 11418187 - 11418252
Alignment:
Q  94 agaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    |||||||||||||||||||||||| ||| |||||||||| | | | ||||||||||||||||||||    
T  11418187 agaaattacctaggatatctagcacgtgcgttaaacttggcattgcatacattaaaattacaataa 11418252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 19360184 - 19360112
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattac 154  Q
    ||||||||| ||||||||||| || ||||||||||||| |||||||||||| |   |||||||||||||||||    
T  19360184 aacacccctactagaaattacatacgatatctagcatgagtgttaaacttggcaatggatacattaaaattac 19360112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 5938284 - 5938340
Alignment:
Q  198 tacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttc 254  Q
    |||||| |||||| | ||||| ||||| ||||||||||||||||| |||||||||||    
T  5938284 tacctctgaaataataccacttacgtgaactttatatggtccagcgacttctgcttc 5938340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 20811331 - 20811254
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||||||| | | ||||||||||||||||||||||    
T  20811331 aacacccctactagaatttacgtaggatatctagcatgtgtgttaaacttggcattggatacattaaaattacaataa 20811254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 5556895 - 5556967
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattac 154  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| |   |||||||||||||||||    
T  5556895 aacacccctactagaaattacctaggatatctagcatgagtgttaaacttggcaatggatacattaaaattac 5556967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 4844732 - 4844657
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    ||||||||| ||||||||| |||||||||||||||||  ||||||||||||   | ||||||||||||||||||||||    
T  4844732 aacacccctactagaaatttcctaggatatctagcat--gtgttaaacttgggattggatacattaaaattacaataa 4844657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 304 - 230
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaa 156  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| |   |||||||||||||||||||    
T  304 aacacccctactagaaattacctaggatatctagcatgagtgttaaacttggcaatggatacattaaaattacaa 230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 37761 - 37687
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaa 156  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| |   |||||||||||||| ||||    
T  37761 aacacccctactagaaattacctaggatatctagcatgagtgttaaacttggcagtggatacattaaaatgacaa 37687  T

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Target: scaffold0043 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 70449 - 70367
Alignment:
Q  77 tttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    |||| ||||||||| ||||| ||| ||||||||||||||||||||||||||||||| | | | ||||||||||||||||||||    
T  70449 tttgtaacacccctactagacatttcctaggatatctagcatgtgtgttaaacttggcattgaatacattaaaattacaataa 70367  T

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Target: scaffold0060 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 45495 - 45423
Alignment:
Q  87 ccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| | |  |||||||||||| ||||||    
T  45495 ccctactagaaattacctaggatatctagcatgtgtgttaaacttgacattgagtacattaaaatttcaataa 45423  T

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Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 41527650 - 41527722
Alignment:
Q  82 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattac 154  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| |   |||||||||||||||||    
T  41527650 aacacccctactagaaattacctaggatatctagcatgagtgttaaacttggcaatggatacattaaaattac 41527722  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 37456353 - 37456309
Alignment:
Q  213 tccactgacgtgtactttatatggtccagctacttctgcttcatc 257  Q
    |||||||||||| ||||| ||||||||||  ||||||||||||||    
T  37456353 tccactgacgtgaactttgtatggtccagtgacttctgcttcatc 37456309  T

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Target: scaffold0018 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 66310 - 66229
Alignment:
Q  79 tgaaacacccctgctagaaattacctaggatatctagcat-gtgtgttaaacttgacgtcggatacattaaaattacaataa 159  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||||||||||||| | | || ||| |||||||||||||||    
T  66310 tgaaacacccctactagaaattacctagaatatctagcatggtgtgttaaacttggcattgggtacgttaaaattacaataa 66229  T

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