View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2932_low_4 (Length: 731)

Name: NF2932_low_4
Description: NF2932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2932_low_4
NF2932_low_4
[»] chr4 (13 HSPs)
chr4 (40-731)||(10498875-10499569)
chr4 (236-325)||(35157998-35158089)
chr4 (225-323)||(2361990-2362092)
chr4 (225-323)||(19482612-19482712)
chr4 (225-323)||(23293001-23293101)
chr4 (225-326)||(903866-903969)
chr4 (231-323)||(27706192-27706286)
chr4 (225-335)||(36635268-36635380)
chr4 (225-277)||(4157102-4157155)
chr4 (224-259)||(20633428-20633463)
chr4 (261-323)||(40481618-40481680)
chr4 (225-259)||(46084047-46084081)
chr4 (294-323)||(6485626-6485655)
[»] scaffold0053 (1 HSPs)
scaffold0053 (225-323)||(8742-8842)
[»] chr6 (17 HSPs)
chr6 (226-323)||(16766642-16766741)
chr6 (225-325)||(7938060-7938162)
chr6 (225-323)||(8776988-8777088)
chr6 (225-323)||(426529-426629)
chr6 (225-323)||(9107385-9107485)
chr6 (261-323)||(17841604-17841667)
chr6 (227-323)||(12696277-12696368)
chr6 (240-323)||(8365534-8365619)
chr6 (229-331)||(5732517-5732621)
chr6 (225-331)||(9027122-9027230)
chr6 (245-323)||(34595098-34595178)
chr6 (265-331)||(10842517-10842584)
chr6 (225-326)||(10888986-10889089)
chr6 (261-323)||(16833289-16833352)
chr6 (246-331)||(30866151-30866238)
chr6 (266-323)||(10770689-10770747)
chr6 (294-331)||(7086810-7086847)
[»] chr7 (7 HSPs)
chr7 (227-323)||(11061091-11061189)
chr7 (266-323)||(9408349-9408407)
chr7 (225-323)||(25481846-25481946)
chr7 (236-323)||(24339597-24339686)
chr7 (224-277)||(9778451-9778505)
chr7 (294-331)||(15902837-15902874)
chr7 (267-331)||(20549778-20549843)
[»] chr1 (25 HSPs)
chr1 (225-325)||(398778-398880)
chr1 (225-323)||(47989442-47989541)
chr1 (226-325)||(1486722-1486823)
chr1 (225-323)||(42359464-42359564)
chr1 (225-323)||(22881631-22881725)
chr1 (225-331)||(38503264-38503372)
chr1 (261-323)||(46348398-46348461)
chr1 (266-323)||(1705007-1705065)
chr1 (266-323)||(31672910-31672968)
chr1 (237-325)||(34298392-34298482)
chr1 (226-321)||(9103585-9103682)
chr1 (299-331)||(34257917-34257949)
chr1 (225-323)||(41877485-41877585)
chr1 (296-331)||(7353500-7353535)
chr1 (224-290)||(10577784-10577851)
chr1 (261-323)||(18556471-18556534)
chr1 (225-323)||(29144373-29144472)
chr1 (266-320)||(30359374-30359429)
chr1 (261-323)||(48450602-48450665)
chr1 (270-323)||(113289-113343)
chr1 (261-323)||(14359537-14359599)
chr1 (266-323)||(22515902-22515960)
chr1 (225-259)||(24334776-24334810)
chr1 (224-331)||(2896128-2896237)
chr1 (294-331)||(16164322-16164359)
[»] chr8 (17 HSPs)
chr8 (224-323)||(2572071-2572172)
chr8 (266-325)||(15816142-15816202)
chr8 (261-323)||(8343297-8343360)
chr8 (224-312)||(22651919-22652009)
chr8 (225-323)||(29510319-29510419)
chr8 (225-323)||(22197757-22197857)
chr8 (225-284)||(24413615-24413675)
chr8 (261-323)||(20873050-20873113)
chr8 (268-323)||(24613509-24613564)
chr8 (261-323)||(36450769-36450832)
chr8 (240-312)||(13436990-13437064)
chr8 (265-326)||(39954291-39954353)
chr8 (225-325)||(44067460-44067562)
chr8 (294-323)||(8342987-8343016)
chr8 (294-331)||(14134714-14134751)
chr8 (224-331)||(24362209-24362318)
chr8 (225-270)||(24669384-24669429)
[»] chr2 (13 HSPs)
chr2 (225-331)||(34784989-34785097)
chr2 (225-323)||(21374714-21374809)
chr2 (225-323)||(30335361-30335461)
chr2 (227-335)||(21616708-21616818)
chr2 (261-323)||(20539689-20539752)
chr2 (261-331)||(23718007-23718078)
chr2 (261-331)||(24105679-24105750)
chr2 (261-331)||(30527602-30527673)
chr2 (261-323)||(30717545-30717608)
chr2 (265-331)||(31808062-31808129)
chr2 (261-326)||(28677890-28677956)
chr2 (294-324)||(36409641-36409671)
chr2 (225-324)||(31283992-31284093)
[»] chr3 (23 HSPs)
chr3 (225-323)||(21479068-21479162)
chr3 (225-320)||(10335304-10335401)
chr3 (246-323)||(8587036-8587115)
chr3 (225-323)||(14747511-14747606)
chr3 (225-323)||(15796309-15796409)
chr3 (226-320)||(16000034-16000130)
chr3 (224-325)||(34307793-34307896)
chr3 (261-323)||(55401056-55401119)
chr3 (266-323)||(10268501-10268559)
chr3 (225-320)||(3164043-3164140)
chr3 (267-323)||(4987306-4987363)
chr3 (294-330)||(4201411-4201447)
chr3 (294-326)||(15314888-15314920)
chr3 (267-321)||(10954939-10954994)
chr3 (225-323)||(35994753-35994852)
chr3 (225-312)||(750644-750734)
chr3 (294-324)||(25064924-25064954)
chr3 (294-323)||(1509554-1509583)
chr3 (294-331)||(7928465-7928502)
chr3 (237-324)||(23915915-23916004)
chr3 (294-331)||(32804547-32804584)
chr3 (294-331)||(39002047-39002084)
chr3 (294-331)||(49505161-49505198)
[»] scaffold0021 (1 HSPs)
scaffold0021 (225-341)||(130426-130544)
[»] scaffold0027 (1 HSPs)
scaffold0027 (225-323)||(46626-46726)
[»] chr5 (21 HSPs)
chr5 (225-323)||(21522694-21522794)
chr5 (225-323)||(21533260-21533360)
chr5 (261-323)||(14674250-14674313)
chr5 (267-323)||(6247609-6247666)
chr5 (225-324)||(6770487-6770588)
chr5 (261-341)||(27144444-27144525)
chr5 (238-323)||(21191071-21191158)
chr5 (240-325)||(22013373-22013460)
chr5 (267-325)||(43564870-43564927)
chr5 (224-323)||(19579644-19579745)
chr5 (230-320)||(13287417-13287509)
chr5 (225-302)||(15382421-15382500)
chr5 (269-323)||(33178014-33178069)
chr5 (266-331)||(12927640-12927706)
chr5 (266-323)||(21351920-21351978)
chr5 (266-323)||(31084309-31084367)
chr5 (225-325)||(36642775-36642876)
chr5 (266-323)||(39698527-39698585)
chr5 (266-323)||(42893346-42893404)
chr5 (236-323)||(21541985-21542074)
chr5 (225-254)||(32426938-32426967)
[»] scaffold0003 (1 HSPs)
scaffold0003 (245-324)||(241558-241639)
[»] scaffold0103 (1 HSPs)
scaffold0103 (261-323)||(51792-51855)
[»] scaffold0171 (1 HSPs)
scaffold0171 (225-325)||(23371-23466)
[»] scaffold0223 (1 HSPs)
scaffold0223 (261-323)||(20153-20216)
[»] scaffold0246 (1 HSPs)
scaffold0246 (261-323)||(19557-19619)
[»] scaffold0227 (1 HSPs)
scaffold0227 (272-325)||(7324-7378)
[»] scaffold0306 (1 HSPs)
scaffold0306 (240-323)||(13359-13444)
[»] scaffold0152 (1 HSPs)
scaffold0152 (240-323)||(21883-21968)
[»] scaffold0011 (1 HSPs)
scaffold0011 (294-323)||(17764-17793)


Alignment Details
Target: chr4 (Bit Score: 493; Significance: 0; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 40 - 731
Target Start/End: Complemental strand, 10499569 - 10498875
Alignment:
Q  40 gttttttaatagaaaaataattaaatatattttttagttctctaattatccaagtaaacaattgagctcaaatgattaatgaattt-aaactcttagtta 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10499569 gttttttaatagaaaaataattaaatatattttttagttctctaattatccaagtaaacaattgagctcaaatgattaatgaattttaaactcttagtta 10499470  T
Q  139 aagacaaattgtttcgaaatatccaaattcgaattctaactaaaaaattctttggaaaaatgctcgatcaaagtttggattactcgctatgaagcatgga 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10499469 aagacaaattgtttcgaaatatccaaattcgaattctaactaaaaaaatctttggaaaaatgctcggtcaaagtttggattactcgctatgaagcatgga 10499370  T
Q  239 tacggacacggacaccagacatacactgacactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaattatatatgtccgtgctt 338  Q
    ||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||       
T  10499369 tacagatacggacaccagacacacactgacactgacacaccgacacatctaaaacttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcg 10499270  T
Q  339 catggattattagtgtaatccaaggattgtccatgcttcatagattaccaaacccttccctctgaagatcagagaattataataaaaataagttctataa 438  Q
     |      |   |  |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10499269 gacccgacacacgcctaatccgaggattgtccgtgcttcatagattaccaaacccttccctctgaagatcagagaattataataaaaataagttctataa 10499170  T
Q  439 tcttaaattttgtttttagtcttgtaccaacttctcatatctacaaattacaaaactacatgctttcaatcttactaaaaacattcaattttgtaatttg 538  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10499169 tcttgaattttgtttttagtcttgtaccaacttctcatatctacaaattacaaaactacatgctttcaatcttactaaaaacattcaattttgtaatttg 10499070  T
Q  539 aagcaacatcaaagtagatattccttgtc-aaaaaataatcaaagtagatattcatataagattaaacaacnnnnnnnnnnnncgtaaattttatagtaa 637  Q
    ||||||||| ||||||||||||||||||| |||||| |||| ||||||||||||  |||||||||||| ||            |||||||||||||||||    
T  10499069 aagcaacatgaaagtagatattccttgtcaaaaaaaaaatcgaagtagatattctaataagattaaac-accaaaaagaaaaacgtaaattttatagtaa 10498971  T
Q  638 ttgaaaagattgtaacttaaaaaagataactgattgaaaagatagaattttgatggtaagaaagagt--agagagagcgaacatacattaacaaag 731  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||| ||||||||||||||||||    
T  10498970 ttgaaaagattgtaacttaaaaaagataactgattgaaaagatagaattttgatggtaagaaagaatagagagagagagaacatacattaacaaag 10498875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 236 - 325
Target Start/End: Complemental strand, 35158089 - 35157998
Alignment:
Q  236 ggatacggacacggacaccagacata-cactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattata 325  Q
    ||||||||||||||||||| |||| | ||| ||||||||||| ||||| || |||| || ||| ||||||||||||||||||||||||||||    
T  35158089 ggatacggacacggacaccggacacaacacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattata 35157998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 2362092 - 2361990
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacatac---actgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaa 320  Q
    |||||||| | ||||||||||||| ||| |||||| ||   | ||||| ||||||||||||||| |||| || |||||||||| ||||||||||||||||    
T  2362092 ctatgaagtacggatacggacacgaacatcagacacacgacattgacattgacacaccgacacagctaataatttgaaaaaattacataatttagtgtaa 2361993  T
Q  321 tta 323  Q
    |||    
T  2361992 tta 2361990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 19482612 - 19482712
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| ||||||| |||| |||||||||||  |||| ||||||||||| |||||||| |||| || ||||||| |||||||||||  ||||||||    
T  19482612 ctatgaagcacggatacgaacacagacaccagacacgacacagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaatt 19482711  T
Q  323 a 323  Q
    |    
T  19482712 a 19482712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 23293101 - 23293001
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    ||||||||||  |||||||||||||||||| ||||  |||| |||| |||||| |||||||| |||| || ||||||||||||||||||| ||| |||||    
T  23293101 ctatgaagcacagatacggacacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataatt 23293002  T
Q  323 a 323  Q
    |    
T  23293001 a 23293001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 903866 - 903969
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| |||||||||||||| | |||||||| | || ||||||||||||||| |||   ||| || |||| |||||||||||||| |||||||||    
T  903866 ctatgaagcacggatacggacacgggcgccagacataaaacggacactgacacaccggcaccgttaataatttgagaaaatcacataattcagtgtaatt 903965  T
Q  323 atat 326  Q
    ||||    
T  903966 atat 903969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 27706286 - 27706192
Alignment:
Q  231 agcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||| ||||||||||||||||||||||||  |||  |||||||||||  |||||||  ||| || || |||||||||||||||||||||||||||    
T  27706286 agcacggatacggacacggacaccagacacgacagggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaatta 27706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 335
Target Start/End: Original strand, 36635268 - 36635380
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||||||||| |||||| |||||| ||||  || | ||||||||||| || ||||  |||| || |||| |||||||||||||| |||||||||    
T  36635268 ctatgaagcatggataaggacacagacaccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaatt 36635367  T
Q  323 atatatgtccgtg 335  Q
    |||| ||| ||||    
T  36635368 atatgtgttcgtg 36635380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 4157102 - 4157155
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacaca 277  Q
    |||||||||| ||||||||||||||||||||||||  |||| ||||||||||||    
T  4157102 ctatgaagcacggatacggacacggacaccagacacgacacagacactgacaca 4157155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 20633428 - 20633463
Alignment:
Q  224 gctatgaagcatggatacggacacggacaccagaca 259  Q
    ||||||||||| ||||||||||||||||||||||||    
T  20633428 gctatgaagcacggatacggacacggacaccagaca 20633463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 40481618 - 40481680
Alignment:
Q  261 acactgacactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||||||||||| |||| ||| |||| | ||  ||||||||||||||| ||||||||||    
T  40481618 acactgacactgacacgccgatacaactaataatttgaaaaatcacataattcagtgtaatta 40481680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 225 - 259
Target Start/End: Complemental strand, 46084081 - 46084047
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca 259  Q
    |||||||||||||||||||||||||||||| ||||    
T  46084081 ctatgaagcatggatacggacacggacaccggaca 46084047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 323
Target Start/End: Complemental strand, 6485655 - 6485626
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||||||||||||||||||||||||    
T  6485655 ttgaaaaaatcacataatttagtgtaatta 6485626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 8742 - 8842
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||||||||||||||||||||||| ||||  |||| ||||||||||| |||||||| |||| || |||||||||||| || |||||||||||||    
T  8742 ctatgaagcatggatacggacacggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaatt 8841  T
Q  323 a 323  Q
    |    
T  8842 a 8842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 2e-20; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 226 - 323
Target Start/End: Original strand, 16766642 - 16766741
Alignment:
Q  226 tatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||||||||||||||||||||||| ||||  |||  ||||||||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  16766642 tatgaagcatggatacggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 16766741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 225 - 325
Target Start/End: Original strand, 7938060 - 7938162
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| ||||||||||||||||||| ||||  |||  ||||||||||| |||||||| |||| || |||||||||||| ||||||||||||||||    
T  7938060 ctatgaagcacggatacggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaatt 7938159  T
Q  323 ata 325  Q
    |||    
T  7938160 ata 7938162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 8777088 - 8776988
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| ||||||||||||||||| | ||||  |||| ||||||||||| |||||||| |||| || |||||||||||||| |||| |||||||||    
T  8777088 ctatgaagcacggatacggacacggacaacggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaatt 8776989  T
Q  323 a 323  Q
    |    
T  8776988 a 8776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 426629 - 426529
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    ||||||||||||||||| |||||||| ||| ||||  |||| ||||||||||| ||||||||  ||| || ||||||||||||||||||| | |||||||    
T  426629 ctatgaagcatggatacagacacggataccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaatt 426530  T
Q  323 a 323  Q
    |    
T  426529 a 426529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 9107485 - 9107385
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| |||||| |||||||||||| ||||  |||| |||||| |||| |||||||| |||| || |||||||||||||| |||| |||||||||    
T  9107485 ctatgaagcacggatactgacacggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaatt 9107386  T
Q  323 a 323  Q
    |    
T  9107385 a 9107385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 17841667 - 17841604
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||| ||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||    
T  17841667 acacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 12696277 - 12696368
Alignment:
Q  227 atgaagcatggatacggacacggacaccagacatacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||| |||||||||||||||||| |      ||| ||||||||||| |||||||| |||| || |||||||||| |||||||| ||||||||||    
T  12696277 atgaagcacggatacggacacggacacga------cacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 12696368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 240 - 323
Target Start/End: Complemental strand, 8365619 - 8365534
Alignment:
Q  240 acggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||| ||||||||||||||  |||| ||||||||||| |||||||| |||| || ||||||| |||||||||||  |||||||||    
T  8365619 acggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaatta 8365534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 331
Target Start/End: Complemental strand, 5732621 - 5732517
Alignment:
Q  229 gaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatat 326  Q
    ||||||||||||| |||||||||||  ||||  |||  ||||||||||| |||||||   ||| || |||| ||||||||||| ||||||||||||||||    
T  5732621 gaagcatggatacagacacggacactggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatat 5732522  T
Q  327 atgtc 331  Q
     ||||    
T  5732521 gtgtc 5732517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 225 - 331
Target Start/End: Original strand, 9027122 - 9027230
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    ||||||||||  ||||||||||||||| || ||||  |||| ||||||||||| |||||||  |||| || |||| | ||||||||||||  ||||||||    
T  9027122 ctatgaagcaccgatacggacacggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaatt 9027221  T
Q  323 atatatgtc 331  Q
    |||| ||||    
T  9027222 atatgtgtc 9027230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 323
Target Start/End: Original strand, 34595098 - 34595178
Alignment:
Q  245 cacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||||| ||||  |||| |||| |||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  34595098 cacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 34595178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 10842517 - 10842584
Alignment:
Q  265 tgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    |||||| ||||| |||||||  |||| || |||||||||||||||||||||||||||| |||| ||||    
T  10842517 tgacacggacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtc 10842584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 10889089 - 10888986
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| |||| | |||||||||| || |||| |||| ||||| ||||||  |||||  |||| || |||| |||||||||||||||||||| |||    
T  10889089 ctatgaagcacggatgcagacacggacatcaaacatgacacggacaccgacacatagacaccgctaataatttgataaaatcacataatttagtgtgatt 10888990  T
Q  323 atat 326  Q
    ||||    
T  10888989 atat 10888986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 16833289 - 16833352
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||| ||||||||||| |||||||| |||| || |||||||||||||||| || ||||||||||    
T  16833289 acacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaatta 16833352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 331
Target Start/End: Complemental strand, 30866238 - 30866151
Alignment:
Q  246 acggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    ||||||||| ||||| |||||||||| |||||||| ||||  |||| || |||| |||||||||||||| | ||||||||||| ||||    
T  30866238 acggacaccggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtc 30866151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 10770747 - 10770689
Alignment:
Q  266 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||||| || ||||| |||| || ||||||||||||||||||| ||||||||||    
T  10770747 gacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaatta 10770689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 7086810 - 7086847
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  7086810 ttgagaaaatcacataatttagtgtaattatatgtgtc 7086847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 11061189 - 11061091
Alignment:
Q  227 atgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||| ||||||||||||||||| | || |  |||| |||||||||||||||||||| |||| || ||||||||||||||||||||||| ||||||    
T  11061189 atgaagcacggatacggacacggacatcggatacgacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataatta 11061091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 9408407 - 9408349
Alignment:
Q  266 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||||||||||||||  ||| || ||||||||||||||||||||||||||||||    
T  9408407 gacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaatta 9408349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 25481846 - 25481946
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacata-cactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| |||||| |||||||||| | |||| | ||  |||| |||||| |||||||| |||| || ||||||||||||||||||| |||||||||    
T  25481846 ctatgaagcacggatacagacacggacatcggacacaacatggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 25481945  T
Q  323 a 323  Q
    |    
T  25481946 a 25481946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 236 - 323
Target Start/End: Original strand, 24339597 - 24339686
Alignment:
Q  236 ggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||| ||||||||| ||||  |||  |||| |||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  24339597 ggatacggatacggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 24339686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 9778451 - 9778505
Alignment:
Q  224 gctatgaagcatggatacggacacggacaccagaca-tacactgacactgacaca 277  Q
    ||||||||||| ||||||||||||||||||| ||||  |||| ||||||||||||    
T  9778451 gctatgaagcacggatacggacacggacaccggacacgacacggacactgacaca 9778505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 15902837 - 15902874
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  15902837 ttgataaaatcacataatttagtgtaattatatgtgtc 15902874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 267 - 331
Target Start/End: Original strand, 20549778 - 20549843
Alignment:
Q  267 acactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    ||||||||||||||||||  |||| || |||| |||||||| ||||| ||||||||||||| ||||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtc 20549843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 2e-17; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 225 - 325
Target Start/End: Complemental strand, 398880 - 398778
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| |||||||||| |||||||| ||||  |||| ||||||||||| |||||||  |||| || ||||||||||||||||||| |||||||||    
T  398880 ctatgaagcacggatacggacgcggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaatt 398781  T
Q  323 ata 325  Q
    |||    
T  398780 ata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 47989442 - 47989541
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||||||||||| |||||||| ||||||||  |||| ||||||||||| ||||||||   | || || |||||||||||||||| ||||||||||    
T  47989442 ctatgaagcatggatacagacacggataccagacacgacacagacactgacacgccgacacaataataatttaaaaaaatcacataattcagtgtaatta 47989541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 1486823 - 1486722
Alignment:
Q  226 tatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||||||||||||||||||| ||| || |  |||| || |||||||| | |||||| |||| || ||||||||||||||||||| ||||||||||    
T  1486823 tatgaagcatggatacggacacggataccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 1486724  T
Q  324 ta 325  Q
    ||    
T  1486723 ta 1486722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 42359564 - 42359464
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacata-cactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| ||||||||||||| |||||  ||| | ||| ||||||||||| | ||||||||||| || |||||||||||||| |||| |||||||||    
T  42359564 ctatgaagcacggatacggacacgaacaccgtacacaacacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaatt 42359465  T
Q  323 a 323  Q
    |    
T  42359464 a 42359464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 22881725 - 22881631
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacatacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||||| |||||  |||||||||||| ||||      ||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||    
T  22881725 ctatgaagcacggatatagacacggacaccggacac-----gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaatta 22881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 331
Target Start/End: Original strand, 38503264 - 38503372
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||| ||| ||||||||||||||||||  ||||| |||| |||||| ||||||||||||  |||| || |||| ||||||| ||| || |||||||||    
T  38503264 ctatgatgcacggatacggacacggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaatt 38503363  T
Q  323 atatatgtc 331  Q
    |||| ||||    
T  38503364 atatgtgtc 38503372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 46348461 - 46348398
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||| ||||||||||| |||||||| |||| || |||||||||||| |||||||||||||||||    
T  46348461 acacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaatta 46348398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 1705065 - 1705007
Alignment:
Q  266 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||||| || |||||||    
T  1705065 gacaccgacacaccgacacatctaataatttgaaaaaatcacataattcagggtaatta 1705007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 31672968 - 31672910
Alignment:
Q  266 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||||||||||||||| |||| || ||||||||||||| ||||| ||||||||||    
T  31672968 gacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaatta 31672910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 237 - 325
Target Start/End: Original strand, 34298392 - 34298482
Alignment:
Q  237 gatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattata 325  Q
    ||||| |||||| ||||||||||  |||| || ||||||||||||||||  |||| || |||| |||||||||||||| ||||||||||||    
T  34298392 gatacagacacgtacaccagacacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 321
Target Start/End: Original strand, 9103585 - 9103682
Alignment:
Q  226 tatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaat 321  Q
    ||||||||| ||||| ||||||| ||||| ||||  || | ||||||||||| ||||||||  ||| || ||||||||||||||||||||||| ||||    
T  9103585 tatgaagcacggatatggacacgaacacctgacaggactcggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtttaat 9103682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 331
Target Start/End: Complemental strand, 34257949 - 34257917
Alignment:
Q  299 aaaatcacataatttagtgtaattatatatgtc 331  Q
    |||||||||||||||||||||||||||||||||    
T  34257949 aaaatcacataatttagtgtaattatatatgtc 34257917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 41877585 - 41877485
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| ||||||||||| ||| ||||||||  |||| |||||||  || |||||||  |||| || |||| ||||| ||||||||||||||||||    
T  41877585 ctatgaagcacggatacggacatggataccagacacgacacagacactggtacgccgacaccgctaataatttgagaaaattacataatttagtgtaatt 41877486  T
Q  323 a 323  Q
    |    
T  41877485 a 41877485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 7353535 - 7353500
Alignment:
Q  296 gaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    |||||||| |||||||||||||||||||||||||||    
T  7353535 gaaaaaattacataatttagtgtaattatatatgtc 7353500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 10577851 - 10577784
Alignment:
Q  224 gctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa 290  Q
    ||||||||||| ||||||||||||||||||| ||||  |||| ||||| ||||| |||||||| ||||    
T  10577851 gctatgaagcacggatacggacacggacaccggacacgacacggacaccgacacgccgacacagctaa 10577784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 18556534 - 18556471
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||| ||||||||||| |||||||| |||| || ||||||| ||||||||||||| ||||||||    
T  18556534 acacggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaatta 18556471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 29144472 - 29144373
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacatacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||||||||||||||||| || || | ||  ||||||||||||| || |||||||| |||| || |||||||||  | |||||  ||||||||||    
T  29144472 ctatgaagcatggatacggacacagatacgacacggacactgacactgatacgccgacacagctaataatttgaaaaaaatagataatgcagtgtaatta 29144373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 30359374 - 30359429
Alignment:
Q  266 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaa 320  Q
    ||||||||||||||| |||| || | || |||||||||||||||||||||||||||    
T  30359374 gacactgacacaccggcacaactgataatttgaaaaaatcacataatttagtgtaa 30359429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 48450665 - 48450602
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||| ||||||||||| || ||||| |||| || |||||||||| |||||||||||||||||||    
T  48450665 acacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaatta 48450602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 270 - 323
Target Start/End: Original strand, 113289 - 113343
Alignment:
Q  270 ctgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 113343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 14359599 - 14359537
Alignment:
Q  261 acactgacactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||| ||||| ||||| |||||||| |||| | ||  ||||||||||||||||||||||||||    
T  14359599 acacagacacggacacgccgacacagctaataatttgaaaaatcacataatttagtgtaatta 14359537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 22515960 - 22515902
Alignment:
Q  266 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||| ||||| | |||||| |||| || ||||||||||||||||||||||||||||||    
T  22515960 gacacggacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaatta 22515902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 225 - 259
Target Start/End: Complemental strand, 24334810 - 24334776
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca 259  Q
    |||||||||||||||||||||||||||||| ||||    
T  24334810 ctatgaagcatggatacggacacggacaccggaca 24334776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 331
Target Start/End: Complemental strand, 2896237 - 2896128
Alignment:
Q  224 gctatgaagcatggatacggacacggacaccagacata-cactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaat 321  Q
    ||||||||| | |||||| | |||||||| | |||| | ||| ||||||||||| |||||||  |||| || |||| |||||||||||||| ||||||      
T  2896237 gctatgaagaacggatacagtcacggacaacggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagc 2896138  T
Q  322 tatatatgtc 331  Q
    ||||||||||    
T  2896137 tatatatgtc 2896128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 16164359 - 16164322
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  16164359 ttgaaaaaatcacataatttaatgtaattatatgtgtc 16164322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 7e-17; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 224 - 323
Target Start/End: Complemental strand, 2572172 - 2572071
Alignment:
Q  224 gctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaat 321  Q
    ||||||||||||||||||||||||||||||  ||||  |||| || || |||||  ||||||| |||| || ||||||||||||||||||||||||||||    
T  2572172 gctatgaagcatggatacggacacggacactggacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaat 2572073  T
Q  322 ta 323  Q
    ||    
T  2572072 ta 2572071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 15816202 - 15816142
Alignment:
Q  266 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattata 325  Q
    ||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||    
T  15816202 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattata 15816142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 8343297 - 8343360
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||||| |||||||||||| | |||| || ||||||||||||||||||||||||||||||    
T  8343297 acactgacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 22651919 - 22652009
Alignment:
Q  224 gctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatt 312  Q
    ||||||||| | |||||||||||| |||||| ||||  |||| ||||||||||| |||||||| |||| || |||||||||||||||||||    
T  22651919 gctatgaagtacggatacggacactgacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatt 22652009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 29510419 - 29510319
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| |||||| |||| ||||||| ||||  |||| ||||||||||| |||||||| |||| || |||||||||||||| |||| ||| |||||    
T  29510419 ctatgaagcacggatactgacatggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataatt 29510320  T
Q  323 a 323  Q
    |    
T  29510319 a 29510319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 22197857 - 22197757
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| ||||   |||||||||||| ||||  |||| |||||| |||| || ||||| |||| || |||||||| ||||||||||||||||||||    
T  22197857 ctatgaagcacggatctagacacggacaccggacacgacacagacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaatt 22197758  T
Q  323 a 323  Q
    |    
T  22197757 a 22197757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 24413675 - 24413615
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacac 284  Q
    |||||||||| ||||||||||||||||||||||||  |||| |||||||||| || |||||    
T  24413675 ctatgaagcacggatacggacacggacaccagacacgacacggacactgacatactgacac 24413615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 20873050 - 20873113
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||| ||||||||||| |||||| |  ||| || ||||||||||||||||||||||||||||||    
T  20873050 acacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaatta 20873113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 24613509 - 24613564
Alignment:
Q  268 cactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||||||||||||| |||| | ||  ||||||||||||||| ||||||||||    
T  24613509 cactgacacaccgacacagctaataatttgaaaaatcacataattaagtgtaatta 24613564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 36450832 - 36450769
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||| ||||||||||| |||||||| |||| || |||||||||||||| |||| ||||||||||    
T  36450832 acacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaatta 36450769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 240 - 312
Target Start/End: Complemental strand, 13437064 - 13436990
Alignment:
Q  240 acggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatt 312  Q
    ||||||| ||||||| ||||| |||  ||||||||||| |||||||| |||| || |||||||||||||||||||    
T  13437064 acggacatggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataatt 13436990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 39954353 - 39954291
Alignment:
Q  265 tgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatat 326  Q
    |||||| ||||| |||||||  |||| || |||| ||||||||||||||||||||||||||||    
T  39954353 tgacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatat 39954291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 225 - 325
Target Start/End: Original strand, 44067460 - 44067562
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| ||| || |||||||||||||||||  |||| ||||||||||| |||||||   ||| || |||| ||||| |||||||  |||||||||    
T  44067460 ctatgaagcacggacacagacacggacaccagacaccacaccgacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaatt 44067559  T
Q  323 ata 325  Q
    |||    
T  44067560 ata 44067562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 323
Target Start/End: Original strand, 8342987 - 8343016
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||||||||||||||||||||||||    
T  8342987 ttgaaaaaatcacataatttagtgtaatta 8343016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 14134714 - 14134751
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  14134714 ttgagaaaatcacataattcagtgtaattatatatgtc 14134751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 331
Target Start/End: Complemental strand, 24362318 - 24362209
Alignment:
Q  224 gctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaat 321  Q
    |||||||||||  |||||||| ||||||||| || |  |||| ||||| ||||| |||||||  |||| || |||| | |||||||||||| ||||||||    
T  24362318 gctatgaagcacagatacggatacggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaat 24362219  T
Q  322 tatatatgtc 331  Q
    ||||| ||||    
T  24362218 tatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 24669384 - 24669429
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacatacactgacac 270  Q
    |||| |||||||||||||||||||||||| | ||| ||||||||||    
T  24669384 ctataaagcatggatacggacacggacacgacacagacactgacac 24669429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 3e-16; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 225 - 331
Target Start/End: Complemental strand, 34785097 - 34784989
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    ||||||||||  ||||||||||||||| |||||||  |||| |||||||||||||||||||| ||||    || | ||||||||||||||||||||||||    
T  34785097 ctatgaagcacagatacggacacggaccccagacacgacacggacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaatt 34784998  T
Q  323 atatatgtc 331  Q
    |||| ||||    
T  34784997 atatgtgtc 34784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 21374809 - 21374714
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacatacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||||| ||||||||||||||||||| |    |||| |||||| |||| |||||||| |||| || |||||||||| |||||||| ||||||||||    
T  21374809 ctatgaagcacggatacggacacggacaccgg----acacggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 21374714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 30335361 - 30335461
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| |||||||||||||||   ||||||  |||| ||||||  ||| |||||||| |||| || |||||||||| ||||||||||||||||||    
T  30335361 ctatgaagcacggatacggacacggatctcagacacgacacggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaatt 30335460  T
Q  323 a 323  Q
    |    
T  30335461 a 30335461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 21616708 - 21616818
Alignment:
Q  227 atgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattat 324  Q
    |||||||| |||||||||||| |||||  ||||  |||| ||||| ||||| |||||||  |||| || |||| |||||||||||||| |||||||||||    
T  21616708 atgaagcacggatacggacacagacacatgacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 21616807  T
Q  325 atatgtccgtg 335  Q
    || ||| ||||    
T  21616808 atgtgtacgtg 21616818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 20539752 - 20539689
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||| |||||||||||  ||||||| |||| || |||||||||||| |||||||||||||||||    
T  20539752 acacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaatta 20539689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 23718007 - 23718078
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    |||| |||||||||||||||||||  |||| || |||| ||| |||||||||| ||||||||||||| ||||    
T  23718007 acacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtc 23718078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 24105679 - 24105750
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    |||| |||||||||||||||||||  |||| || |||| ||| |||||||||| ||||||||||||| ||||    
T  24105679 acacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtc 24105750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 30527673 - 30527602
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    ||||||||||||||||||| ||||   ||| || |||| ||||||| |||||||||||||||||||| ||||    
T  30527673 acactgacactgacacacccacactgttaataatttgagaaaatcatataatttagtgtaattatatgtgtc 30527602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 30717608 - 30717545
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||| |||||||||| ||||||| | |||| || ||||||||||||||||||| ||||||||||    
T  30717608 acacggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaatta 30717545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 31808062 - 31808129
Alignment:
Q  265 tgacactgacacaccgacacatctaaaacttgaa-aaaatcacataatttagtgtaattatatatgtc 331  Q
    ||||||||||||||||||||  |||| | || || |||||||||||||| ||||||||||||| ||||    
T  31808062 tgacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtc 31808129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 261 - 326
Target Start/End: Original strand, 28677890 - 28677956
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatat 326  Q
    ||||||||||||  || |||||||  |||| || ||||||||||||||||||| |||||||||||||    
T  28677890 acactgacactggaacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatat 28677956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 294 - 324
Target Start/End: Complemental strand, 36409671 - 36409641
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaattat 324  Q
    |||||||||||||||||||||||||||||||    
T  36409671 ttgaaaaaatcacataatttagtgtaattat 36409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 324
Target Start/End: Original strand, 31283992 - 31284093
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    ||||||||||  |||||||||||||||||| ||||| ||||  ||||| |||| |||||||  |||| || |||| |||||||||||||  | |||||||    
T  31283992 ctatgaagcacagatacggacacggacaccggacataacacgtacacttacacgccgacactgctaataatttgagaaaatcacataatccattgtaatt 31284091  T
Q  323 at 324  Q
    ||    
T  31284092 at 31284093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 21479068 - 21479162
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacatacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||||||||||||||||||||||||| ||||      ||||||||||| |||||||| |||| || |||||||||||||| |||| ||||||||||    
T  21479068 ctatgaagcatggatacggacacggacaccggaca-----cgacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaatta 21479162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 10335401 - 10335304
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaa 320  Q
    |||||||||| ||||||| ||||||||||| ||||  |||| ||||||||||| |||||||| |||| || |||||||| ||||||| ||||||||||    
T  10335401 ctatgaagcacggatacgaacacggacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaa 10335304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 8587115 - 8587036
Alignment:
Q  246 acggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||| ||||| |||| ||||||||||| ||||||||||||  || ||||||||||||||||||| ||||||||||    
T  8587115 acggacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaatta 8587036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 14747511 - 14747606
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacatacactgacactgacacaccgacacatctaa-aacttgaaaa-aatcacataatttagtgtaatt 322  Q
    |||||||||| ||||||||| ||||||||| ||||      ||||||||||| |||||||| |||| || ||||||| ||||||||||||||||||||||    
T  14747511 ctatgaagcacggatacggatacggacaccggacac-----gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaatt 14747605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 15796409 - 15796309
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| ||||| ||||||||||||| ||||  |||| |||| |||||| ||||||||  ||| || |||||||||||| |||||| |||||||||    
T  15796409 ctatgaagcacggatatggacacggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaatt 15796310  T
Q  323 a 323  Q
    |    
T  15796309 a 15796309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 320
Target Start/End: Complemental strand, 16000130 - 16000034
Alignment:
Q  226 tatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaa 320  Q
    ||||||||| |||||||||||||||||||  |||  |||| ||||||||||| |||||||| |||| || || ||||||| |||||||| |||||||    
T  16000130 tatgaagcacggatacggacacggacaccgaacacgacacagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaa 16000034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 224 - 325
Target Start/End: Complemental strand, 34307896 - 34307793
Alignment:
Q  224 gctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaat 321  Q
    ||||||||||||||||||||||||| ||||| ||||| |||| |||||  |||| | |||||  |||| || |||| ||||||||||| || ||||||||    
T  34307896 gctatgaagcatggatacggacacgaacaccggacatgacacagacacgaacacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaat 34307797  T
Q  322 tata 325  Q
    ||||    
T  34307796 tata 34307793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 55401056 - 55401119
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||| |||||||| || |||||||| |||| || ||||||||||||||||||||||||||||||    
T  55401056 acacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaatta 55401119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 10268559 - 10268501
Alignment:
Q  266 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||||| ||||||||  ||| || ||||||||||||||||||||||||||||||    
T  10268559 gacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaatta 10268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 3164140 - 3164043
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaa 320  Q
    |||||||||| |||||| |||||||||||| ||||  |||| |||| || |||  ||||||| |||| || ||||||||||||||||||| |||||||    
T  3164140 ctatgaagcacggatacagacacggacaccggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaa 3164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 4987363 - 4987306
Alignment:
Q  267 acactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 4987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 4201411 - 4201447
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaattatatatgt 330  Q
    ||||||||||||||||||| |||||||||||||||||    
T  4201411 ttgaaaaaatcacataattaagtgtaattatatatgt 4201447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 326
Target Start/End: Complemental strand, 15314920 - 15314888
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaattatat 326  Q
    |||||||||||||||||||||||||||||||||    
T  15314920 ttgaaaaaatcacataatttagtgtaattatat 15314888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 10954939 - 10954994
Alignment:
Q  267 acactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaat 321  Q
    |||||||||| |||||||| |||| || ||||||||||||||||||| ||||||||    
T  10954939 acactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaat 10954994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 35994852 - 35994753
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||||| ||||||||||| ||||||| ||||  |||  |||| |||||  |||||||| |||| | ||  ||||||||||||||| ||||||||||    
T  35994852 ctatgaagcacggatacggacatggacaccggacacgacatggacaatgacaagccgacacagctaataatttgaaaaatcacataattcagtgtaatta 35994753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 750734 - 750644
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacac-tgacacaccgacacatctaa-aacttgaaaaaatcacataatt 312  Q
    |||||||||| ||||||||||||||||||| ||||  |||| ||||| ||||||  ||||||| |||| || ||||||| |||||||||||    
T  750734 ctatgaagcacggatacggacacggacaccggacacgacacggacacttgacacggcgacacaactaataatttgaaaatatcacataatt 750644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 294 - 324
Target Start/End: Original strand, 25064924 - 25064954
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaattat 324  Q
    |||||||||||||||||||||||||||||||    
T  25064924 ttgaaaaaatcacataatttagtgtaattat 25064954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 323
Target Start/End: Original strand, 1509554 - 1509583
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||||||||||||||||||||||||    
T  1509554 ttgaaaaaatcacataatttagtgtaatta 1509583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 7928465 - 7928502
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  7928465 ttgaaaaaatcacataattcagtgtaattatatgtgtc 7928502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 237 - 324
Target Start/End: Original strand, 23915915 - 23916004
Alignment:
Q  237 gatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattat 324  Q
    |||||||||||||||||| ||||  |||| || |||||||  || ||||| |||| ||||||||||||||||| |||| | |||||||||    
T  23915915 gatacggacacggacaccggacacgacacagaaactgacatgccaacacagctaacaacttgaaaaaatcacacaattaaatgtaattat 23916004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 32804584 - 32804547
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  32804584 ttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 39002047 - 39002084
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  39002047 ttgaaaaaatcacataattcaatgtaattatatatgtc 39002084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 49505198 - 49505161
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  49505198 ttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 225 - 341
Target Start/End: Original strand, 130426 - 130544
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||||||||||||||||||||||| ||||  |||| |||| |||||  ||||||||  ||| |  ||||||||||||||||||| |||||||||    
T  130426 ctatgaagcatggatacggacacggacaccggacacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaatt 130525  T
Q  323 atatatgtccgtgcttcat 341  Q
    | |  |||| |||||||||    
T  130526 acaagtgtcggtgcttcat 130544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 46626 - 46726
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| ||||||||||||||||| | ||||  |||| |||| |||||| ||||||||  ||| || ||||||||||||||||||| |||||||||    
T  46626 ctatgaagcacggatacggacacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaatt 46725  T
Q  323 a 323  Q
    |    
T  46726 a 46726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 21522694 - 21522794
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| |||||||||||||| |||| ||||  |||| ||||||||||| |||||||| |||| || || ||||||| |||||||| |||||||||    
T  21522694 ctatgaagcacggatacggacacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaatt 21522793  T
Q  323 a 323  Q
    |    
T  21522794 a 21522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 21533260 - 21533360
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| |||||||||||||| |||| ||||  |||| ||||||||||| |||||||| |||| || || ||||||| |||||||| |||||||||    
T  21533260 ctatgaagcacggatacggacacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaatt 21533359  T
Q  323 a 323  Q
    |    
T  21533360 a 21533360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 14674250 - 14674313
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||| ||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||    
T  14674250 acacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 14674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 6247609 - 6247666
Alignment:
Q  267 acactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||||| ||||||||||||| || ||||||||||||||||||| ||||||||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaatta 6247666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 324
Target Start/End: Original strand, 6770487 - 6770588
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    |||||||||| ||||||||| |||||||||  |||| |||| ||||||||||||| |||||| |||| || || | |||||||||||||| |||||| ||    
T  6770487 ctatgaagcacggatacggatacggacaccgaacatgacacggacactgacacactgacacaactaataatttaagaaaatcacataattcagtgtactt 6770586  T
Q  323 at 324  Q
    ||    
T  6770587 at 6770588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 261 - 341
Target Start/End: Original strand, 27144444 - 27144525
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatatgtccgtgcttcat 341  Q
    |||| ||||||||||| |||||||  |||| || ||||  ||||||||||||||||||||||||||| |||| |||||||||    
T  27144444 acacagacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtctgtgcttcat 27144525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 21191158 - 21191071
Alignment:
Q  238 atacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||||| |||||| ||||  |||| ||||||||||  |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  21191158 atacggacactgacaccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 21191071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 325
Target Start/End: Original strand, 22013373 - 22013460
Alignment:
Q  240 acggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattata 325  Q
    ||||| ||||||||| ||||  |||| ||||||||||| |||||||| |||| || ||| |||||| |||||||||||||||||||||    
T  22013373 acggatacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaattacataatttagtgtaattata 22013460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 43564870 - 43564927
Alignment:
Q  267 acactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaattata 325  Q
    |||||||||| |||||||||| | || ||| ||||||||||||||||||||||||||||    
T  43564870 acactgacacgccgacacatc-ataatttggaaaaatcacataatttagtgtaattata 43564927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 323
Target Start/End: Original strand, 19579644 - 19579745
Alignment:
Q  224 gctatgaagcatggatacggacacggacaccagacata-cactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaat 321  Q
    ||||||||||| ||||||| |||| |||||| || | | ||| |||||||| || |||||||| |||| || |||| ||||||||||||||||||| |||    
T  19579644 gctatgaagcacggatacgtacaccgacaccggatacaacacggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaat 19579743  T
Q  322 ta 323  Q
    ||    
T  19579744 ta 19579745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 230 - 320
Target Start/End: Complemental strand, 13287509 - 13287417
Alignment:
Q  230 aagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaa 320  Q
    ||||| ||||||||||||||||||| ||||  |||| |||||| ||||  |||||||  ||| || ||||||||||||||||||| |||||||    
T  13287509 aagcacggatacggacacggacaccggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaa 13287417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 302
Target Start/End: Original strand, 15382421 - 15382500
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaa 302  Q
    |||||||||| ||||||||||||||||||| ||||  |||| |||| |||||| |||||||| |||| || |||||||||    
T  15382421 ctatgaagcacggatacggacacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaa 15382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 33178014 - 33178069
Alignment:
Q  269 actgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||| |||||||| |||| || || |||||||||||||||||||||||||||    
T  33178014 actgacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaatta 33178069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 266 - 331
Target Start/End: Original strand, 12927640 - 12927706
Alignment:
Q  266 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatatgtc 331  Q
    ||||| ||||||||||||   |||| || |||| ||||||| |||||||||||||||||||||||||    
T  12927640 gacacggacacaccgacatcgctaataatttgagaaaatcatataatttagtgtaattatatatgtc 12927706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 21351978 - 21351920
Alignment:
Q  266 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||||||||||||||| |||| || | |||||| |||||||||| ||||||||||    
T  21351978 gacactgacacaccgacacaactaataattggaaaaagtcacataattcagtgtaatta 21351920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 31084309 - 31084367
Alignment:
Q  266 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||||| |||||||| |||| || ||||||||||||||||||| | ||||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaatta 31084367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 225 - 325
Target Start/End: Complemental strand, 36642876 - 36642775
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 322  Q
    ||||||||||||||||||||||  |||||| ||||  |||| ||||||||||| ||||||||  ||| || |||||||| | ||||| |||||||||| |    
T  36642876 ctatgaagcatggatacggaca-agacaccggacacgacacggacactgacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaat 36642778  T
Q  323 ata 325  Q
    |||    
T  36642777 ata 36642775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 39698527 - 39698585
Alignment:
Q  266 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||||| | |||||| |||| || ||||||||||||||||||| ||||||||||    
T  39698527 gacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 39698585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 42893346 - 42893404
Alignment:
Q  266 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||| |||||||||||||| |||| || ||||||||||||||||||  ||||||||||    
T  42893346 gacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaatta 42893404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 236 - 323
Target Start/End: Original strand, 21541985 - 21542074
Alignment:
Q  236 ggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||||||||||||||||||  |||| |||| |||||  |||||||| |||| || || |||| || |||||||| ||||||||||    
T  21541985 ggatacggacacggacaccagacacgacacagacattgacatgccgacacaactaataatttaaaaagataacataattcagtgtaatta 21542074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 254
Target Start/End: Complemental strand, 32426967 - 32426938
Alignment:
Q  225 ctatgaagcatggatacggacacggacacc 254  Q
    ||||||||||||||||||||||||||||||    
T  32426967 ctatgaagcatggatacggacacggacacc 32426938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 245 - 324
Target Start/End: Original strand, 241558 - 241639
Alignment:
Q  245 cacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattat 324  Q
    |||||||||| ||||  |||| ||||||||||| |||||||| |||| || ||| |||||||||||||||||||||||||||    
T  241558 cacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattat 241639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 51792 - 51855
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||| ||||||||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  51792 acacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 225 - 325
Target Start/End: Original strand, 23371 - 23466
Alignment:
Q  225 ctatgaagcatggatacggacacggacaccagacatacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||||| ||||||||||||||||||       |||| ||||||||||| ||||||||  ||| ||||  |||||||||||||||| ||||||||||    
T  23371 ctatgaagcacggatacggacacggacac------gacacagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaatta 23464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 20153 - 20216
Alignment:
Q  261 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||| |||| |||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  20153 acacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 20216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 19557 - 19619
Alignment:
Q  261 acactgacactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaatta 323  Q
    |||||||||||||||| |||| ||| |||| | ||  ||||||||||||||| ||||||||||    
T  19557 acactgacactgacacgccgatacaactaataatttgaaaaatcacataattcagtgtaatta 19619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 7378 - 7324
Alignment:
Q  272 gacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattata 325  Q
    ||||| |||||||| |||| || ||| ||||||||||||||||||||||||||||    
T  7378 gacacgccgacacaactaataatttggaaaaatcacataatttagtgtaattata 7324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 240 - 323
Target Start/End: Original strand, 13359 - 13444
Alignment:
Q  240 acggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||| ||||||||| || || |||| ||||||||||| |||||||| |||| || |||| |||||||||||||| |||| |||||    
T  13359 acggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatta 13444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 240 - 323
Target Start/End: Complemental strand, 21968 - 21883
Alignment:
Q  240 acggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||| ||||||||| || || |||| ||||||||||| |||||||| |||| || |||| |||||||||||||| |||| |||||    
T  21968 acggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatta 21883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 323
Target Start/End: Complemental strand, 17793 - 17764
Alignment:
Q  294 ttgaaaaaatcacataatttagtgtaatta 323  Q
    ||||||||||||||||||||||||||||||    
T  17793 ttgaaaaaatcacataatttagtgtaatta 17764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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