View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2932_low_51 (Length: 246)
Name: NF2932_low_51
Description: NF2932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2932_low_51 |
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Alignment Details
Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 6 - 243
Target Start/End: Complemental strand, 34489776 - 34489539
Alignment:
| Q |
6 |
cataggaatgagataagttttgaataaggctaaaaaatttatatagttgcgtttatcggcttaagtaaaattactcgtcattaaaaccattatagagcat |
105 |
Q |
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| T |
34489776 |
cataggaatgagataagttttgaataaggctaaaatttttatatagttgcgtttatcggcttaagtaaaattactcgtcattaaaaccattatagagcat |
34489677 |
T |
|
| Q |
106 |
ttgttcttgggctgaaaattatctacctttatattctaattctgcaggtctcaaattgaaagaagnnnnnnncctagcccaattttatacaagtgccgcc |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| | |||||||||||||||||| |
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| T |
34489676 |
ttgttcttgggctgaaaattatctacctttatattctaattcagcaggtctcaaattgaaagaagaaaaaaacctagcctatttttatacaagtgccgcc |
34489577 |
T |
|
| Q |
206 |
gctgaccttatgcctgtctattagcctttcaattcatc |
243 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
34489576 |
gctgaccttatgcctgtctattagcctttcaattcatc |
34489539 |
T |
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