View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2932_low_56 (Length: 242)
Name: NF2932_low_56
Description: NF2932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2932_low_56 |
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Alignment Details
Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 4 - 240
Target Start/End: Complemental strand, 3684199 - 3683957
Alignment:
| Q |
4 |
aaaaagtgattagttgactcgaaagagacccctacatggcacaagaggcactagcaggatcagtgataaccctgcgcct--acaaattaactctagttga |
101 |
Q |
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| T |
3684199 |
aaaaagtgattagttgactcggaagagacccctacatggcacaagaggcactagcaggatcggtgataaccctgcgccttaacaaattaactctagttga |
3684100 |
T |
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| Q |
102 |
aatcctatttaggagaaactgctaagaaaacacgtgagttttagaagagaaaatgaactatag---acaaaaaattacttgattcaatatttcgaccata |
198 |
Q |
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|||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||| |
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| T |
3684099 |
aatcttatttaggagaaactgataagaaaatgcgtgagttttagaagagaaaatgaactatagaaaaaaaaaaattacctgattcaatatttcgaccata |
3684000 |
T |
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| Q |
199 |
aatatttgctaaac-aaaaaatgtgaaaatgggaaaacatctt |
240 |
Q |
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| T |
3683999 |
aatatttgctaaacaaaaaaatgtgaaaaagggaaaacatctt |
3683957 |
T |
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