View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2932_low_57 (Length: 240)
Name: NF2932_low_57
Description: NF2932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2932_low_57 |
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Alignment Details
Target: chr2 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 15393862 - 15393638
Alignment:
| Q |
1 |
aaacttcatatttgagtgaacttcattttgcaagctgaactcaattttattgtatttttaaaattggggtagagtgtagtgannnnnnnnnnnnnnnnna |
100 |
Q |
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| T |
15393862 |
aaacttcatatttgagtgaacttcattttgcaagctgaactcaattttattgtatttttaaaattggggaagagtgtagtgatattattattattattaa |
15393763 |
T |
|
| Q |
101 |
agtgacatcaacgatcattttacatcatttctcgagtgatattattatttattgaaaatcaaacaaagattttctatctatctaactttttgaactgatg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
15393762 |
agtgacatcaacgatcattttacatcatttctcgagtgatattatgatttattgaaaatcaaacaaagattttctttctatctaactttttgaactgatg |
15393663 |
T |
|
| Q |
201 |
tttgagggctcctaacagaaaacaa |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
15393662 |
tttgagggctcctaacagaaaacaa |
15393638 |
T |
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